Pi4k2b (phosphatidylinositol 4-kinase type 2 beta) - Rat Genome Database

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Gene: Pi4k2b (phosphatidylinositol 4-kinase type 2 beta) Rattus norvegicus
Analyze
Symbol: Pi4k2b
Name: phosphatidylinositol 4-kinase type 2 beta
RGD ID: 1359515
Description: Predicted to enable 1-phosphatidylinositol 4-kinase activity. Predicted to be involved in Golgi organization; endosome organization; and phosphatidylinositol phosphate biosynthetic process. Predicted to be located in bounding membrane of organelle; cytosol; and endoplasmic reticulum membrane. Predicted to be active in endosome; plasma membrane; and trans-Golgi network. Orthologous to human PI4K2B (phosphatidylinositol 4-kinase type 2 beta); PARTICIPATES IN inositol phosphate metabolic pathway; phosphatidylinositol 3-kinase signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: MGC94512; phosphatidylinositol 4-kinase type 2-beta; phosphatidylinositol 4-kinase type II-beta; phosphatidylinositol 4-kinase type-II beta
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81462,434,589 - 62,461,507 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1462,424,511 - 62,461,446 (-)EnsemblGRCr8
mRatBN7.21458,221,790 - 58,248,716 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1458,220,437 - 58,248,673 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1462,627,530 - 62,654,397 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01463,941,658 - 63,968,016 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01460,338,407 - 60,364,765 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01460,567,968 - 60,594,821 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1460,567,967 - 60,594,844 (-)Ensemblrn6Rnor6.0
Rnor_5.01460,685,762 - 60,712,615 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41462,975,861 - 63,002,714 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1457,321,053 - 57,347,906 (-)NCBICelera
RGSC_v3.11462,978,251 - 63,005,105 (-)NCBI
Cytogenetic Map14q11NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dinitrotoluene  (EXP)
2-bromohexadecanoic acid  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
aflatoxin B1  (ISO)
aflatoxin M1  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
Butylbenzyl phthalate  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chlordecone  (ISO)
chlorpyrifos  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (EXP,ISO)
dicrotophos  (ISO)
dioxygen  (ISO)
disodium selenite  (ISO)
dorsomorphin  (ISO)
endosulfan  (EXP)
finasteride  (EXP)
fluoranthene  (ISO)
flutamide  (EXP)
folic acid  (ISO)
FR900359  (ISO)
fulvestrant  (ISO)
gentamycin  (EXP)
inulin  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
methoxychlor  (EXP)
nefazodone  (EXP)
nimesulide  (EXP)
okadaic acid  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
pirinixic acid  (ISO)
propiconazole  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sulindac  (EXP)
testosterone  (EXP,ISO)
tetrachloromethane  (ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
trichloroethene  (EXP)
triphenyl phosphate  (ISO)
urethane  (ISO)
valdecoxib  (EXP)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (IEA,ISO,ISS)
early endosome membrane  (IEA,ISO)
endoplasmic reticulum membrane  (IEA,ISO,ISS)
endosome  (IBA)
Golgi membrane  (IEA,ISO,ISS)
membrane  (IEA)
plasma membrane  (IBA,IEA,ISO,ISS)
trans-Golgi network  (IBA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Characterization of type II phosphatidylinositol 4-kinase isoforms reveals association of the enzymes with endosomal vesicular compartments. Balla A, etal., J Biol Chem 2002 May 31;277(22):20041-50. Epub 2002 Mar 28.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:16837555   PMID:19946888  


Genomics

Comparative Map Data
Pi4k2b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81462,434,589 - 62,461,507 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1462,424,511 - 62,461,446 (-)EnsemblGRCr8
mRatBN7.21458,221,790 - 58,248,716 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1458,220,437 - 58,248,673 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1462,627,530 - 62,654,397 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01463,941,658 - 63,968,016 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01460,338,407 - 60,364,765 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01460,567,968 - 60,594,821 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1460,567,967 - 60,594,844 (-)Ensemblrn6Rnor6.0
Rnor_5.01460,685,762 - 60,712,615 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41462,975,861 - 63,002,714 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1457,321,053 - 57,347,906 (-)NCBICelera
RGSC_v3.11462,978,251 - 63,005,105 (-)NCBI
Cytogenetic Map14q11NCBI
PI4K2B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38425,234,033 - 25,279,204 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl425,160,663 - 25,280,542 (+)Ensemblhg38GRCh38
GRCh37425,235,655 - 25,280,826 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36424,844,773 - 24,889,808 (+)NCBIBuild 36Build 36hg18NCBI36
Celera425,684,355 - 25,729,523 (+)NCBICelera
Cytogenetic Map4p15.2NCBI
HuRef424,575,970 - 24,620,982 (+)NCBIHuRef
CHM1_1425,235,255 - 25,280,463 (+)NCBICHM1_1
T2T-CHM13v2.0425,215,954 - 25,261,023 (+)NCBIT2T-CHM13v2.0
Pi4k2b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39552,898,903 - 52,926,686 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl552,898,916 - 52,926,682 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38552,741,561 - 52,769,344 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl552,741,574 - 52,769,340 (+)Ensemblmm10GRCm38
MGSCv37553,132,813 - 53,160,579 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36553,029,856 - 53,057,585 (+)NCBIMGSCv36mm8
Celera550,118,695 - 50,146,437 (+)NCBICelera
Cytogenetic Map5C1NCBI
cM Map528.63NCBI
Pi4k2b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544319,730,459 - 19,760,177 (-)Ensembl
ChiLan1.0NW_00495544319,728,997 - 19,760,569 (-)NCBIChiLan1.0ChiLan1.0
PI4K2B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2325,481,651 - 25,526,897 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1425,675,197 - 25,720,577 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0419,631,806 - 19,677,215 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1424,915,779 - 24,960,895 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl424,916,511 - 24,960,895 (+)EnsemblpanPan2panpan1.1
PI4K2B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1384,981,785 - 85,001,702 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl384,983,899 - 84,999,771 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha387,494,602 - 87,520,450 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0385,954,956 - 85,981,474 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl385,954,797 - 85,981,792 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1385,088,723 - 85,114,795 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0385,193,530 - 85,219,429 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0385,579,403 - 85,605,266 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Pi4k2b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528550,543,250 - 50,571,903 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364774,245,501 - 4,273,571 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364774,244,888 - 4,273,569 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PI4K2B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl819,135,700 - 19,238,335 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1819,200,962 - 19,238,346 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
PI4K2B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12725,085,256 - 25,118,796 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2725,083,031 - 25,118,755 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604771,601,515 - 71,636,431 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pi4k2b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247557,118,501 - 7,146,996 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247557,118,582 - 7,146,990 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Pi4k2b
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11153,379,885 - 53,408,473 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Pi4k2b
100 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:35
Count of miRNA genes:31
Interacting mature miRNAs:34
Transcripts:ENSRNOT00000005349
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143802371083023710Rat
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1459848686104848686Rat
70214Niddm28Non-insulin dependent diabetes mellitus QTL 284.06blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)143900944484009444Rat
1300154Bp189Blood pressure QTL 1893.04arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)143123808072970315Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143067446985041098Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1433424686102238540Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143802371083023710Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1462398852107398852Rat
7387267Uae42Urinary albumin excretion QTL 420.61urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)142252151767521517Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1460854936105854936Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1411334716100078267Rat
2313397Coatc1Coat color QTL1coat/hair pigmentation trait (VT:0010463)coat/hair color measurement (CMO:0001808)141889519263895192Rat
9589034Epfw11Epididymal fat weight QTL 1160.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1459848686104848686Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143802371083023710Rat
1300136Rf22Renal function QTL 223.9renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)144261625899224555Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143941117087582095Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143802371083023710Rat

Markers in Region
RH141800  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21458,221,956 - 58,222,141 (+)MAPPERmRatBN7.2
Rnor_6.01460,568,135 - 60,568,319NCBIRnor6.0
Rnor_5.01460,685,929 - 60,686,113UniSTSRnor5.0
RGSC_v3.41462,976,028 - 62,976,212UniSTSRGSC3.4
Celera1457,321,220 - 57,321,404UniSTS
Cytogenetic Map14q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 160 91 90 59 92 59 6 356 192 11 139 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000005349   ⟹   ENSRNOP00000005349
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1462,433,786 - 62,461,446 (-)Ensembl
mRatBN7.2 Ensembl1458,220,437 - 58,248,673 (-)Ensembl
Rnor_6.0 Ensembl1460,567,967 - 60,594,844 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000169131   ⟹   ENSRNOP00000107236
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1462,424,511 - 62,461,446 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000171326   ⟹   ENSRNOP00000103557
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1462,434,591 - 62,461,446 (-)Ensembl
RefSeq Acc Id: NM_001005883   ⟹   NP_001005883
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81462,434,589 - 62,461,446 (-)NCBI
mRatBN7.21458,221,790 - 58,248,647 (-)NCBI
Rnor_6.01460,567,968 - 60,594,821 (-)NCBI
Rnor_5.01460,685,762 - 60,712,615 (-)NCBI
RGSC_v3.41462,975,861 - 63,002,714 (-)RGD
Celera1457,321,053 - 57,347,906 (-)RGD
Sequence:
RefSeq Acc Id: XM_039091939   ⟹   XP_038947867
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81462,442,854 - 62,461,507 (-)NCBI
mRatBN7.21458,230,975 - 58,248,716 (-)NCBI
RefSeq Acc Id: XM_039091940   ⟹   XP_038947868
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81462,447,098 - 62,461,507 (-)NCBI
mRatBN7.21458,234,366 - 58,248,716 (-)NCBI
RefSeq Acc Id: NP_001005883   ⟸   NM_001005883
- UniProtKB: Q5XIL2 (UniProtKB/Swiss-Prot),   A6IJH1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000005349   ⟸   ENSRNOT00000005349
RefSeq Acc Id: XP_038947867   ⟸   XM_039091939
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038947868   ⟸   XM_039091940
- Peptide Label: isoform X2
Ensembl Acc Id: ENSRNOP00000103557   ⟸   ENSRNOT00000171326
Ensembl Acc Id: ENSRNOP00000107236   ⟸   ENSRNOT00000169131
Protein Domains
PI3K/PI4K catalytic

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5XIL2-F1-model_v2 AlphaFold Q5XIL2 1-477 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699333
Promoter ID:EPDNEW_R9858
Type:initiation region
Name:Pi4k2b_1
Description:phosphatidylinositol 4-kinase type 2 beta
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01460,594,847 - 60,594,907EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1359515 AgrOrtholog
BioCyc Gene G2FUF-15599 BioCyc
BioCyc Pathway PWY-6351 [D-myo-inositol (1,4,5)-trisphosphate biosynthesis] BioCyc
  PWY-6352 [3-phosphoinositide biosynthesis] BioCyc
BioCyc Pathway Image PWY-6351 BioCyc
  PWY-6352 BioCyc
Ensembl Genes ENSRNOG00000003924 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000005349.6 UniProtKB/Swiss-Prot
  ENSRNOT00000171326 ENTREZGENE
Gene3D-CATH 1.10.1070.20 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7135573 IMAGE-MGC_LOAD
InterPro Lsb6/PI4K2 UniProtKB/Swiss-Prot
  PI3/4_kinase_cat_dom UniProtKB/Swiss-Prot
KEGG Report rno:305419 UniProtKB/Swiss-Prot
MGC_CLONE MGC:94512 IMAGE-MGC_LOAD
NCBI Gene 305419 ENTREZGENE
PANTHER PHOSPHATIDYLINOSITOL 4-KINASE TYPE 2-BETA UniProtKB/Swiss-Prot
  PTHR12865 UniProtKB/Swiss-Prot
Pfam PI3_PI4_kinase UniProtKB/Swiss-Prot
PhenoGen Pi4k2b PhenoGen
PROSITE PI3_4_KINASE_3 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000003924 RatGTEx
UniProt A0ABK0LXQ2_RAT UniProtKB/TrEMBL
  A6IJH1 ENTREZGENE, UniProtKB/TrEMBL
  A6IJH2_RAT UniProtKB/TrEMBL
  P4K2B_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-03-30 Pi4k2b  phosphatidylinositol 4-kinase type 2 beta  MGC94512  phosphatidylinositol 4-kinase type-II beta  Symbol and Name updated 1299863 APPROVED
2005-07-29 MGC94512  phosphatidylinositol 4-kinase type-II beta      Symbol and Name status set to provisional 70820 PROVISIONAL