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Gene: Ccdc91 (coiled-coil domain containing 91) Rattus norvegicus

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Symbol:

Ccdc91

Name:

coiled-coil domain containing 91

RGD ID:

1359502

Description:

Predicted to be involved in Golgi to lysosome transport. Predicted to be located in Golgi apparatus; cytosol; and membrane. Predicted to be active in trans-Golgi network. Orthologous to human CCDC91 (coiled-coil domain containing 91); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol; atrazine.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

coiled-coil domain-containing protein 91; coiled-coil domain-containing protein 91-like; GGA-binding partner; LOC100911099; LOC108348191; LOC312863; similar to RIKEN cDNA 1810060J02

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	182,132,931 - 182,304,948 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	182,132,942 - 182,304,948 (+)	Ensembl				GRCr8
mRatBN7.2	4	180,402,327 - 180,574,364 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	180,402,376 - 180,574,364 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	186,685,689 - 186,856,364 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	182,470,232 - 182,640,907 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	181,090,664 - 181,261,351 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	181,873,465 - 182,043,593 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	181,874,861 - 182,043,593 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	246,021,504 - 246,189,263 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	185,103,274 - 185,258,770 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	168,885,253 - 169,056,949 (+)	NCBI		Celera
RGSC_v3.1	4	185,348,397 - 185,503,894 (+)	NCBI
Cytogenetic Map	4	q44	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

substance-related disorder (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3-chloropropane-1,2-diol (EXP)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (ISO)

aristolochic acid A (ISO)

Aroclor 1254 (ISO)

arsane (ISO)

arsenic atom (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

Brodifacoum (EXP)

C60 fullerene (EXP)

cadmium dichloride (EXP)

choline (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

epoxiconazole (ISO)

folic acid (ISO)

L-methionine (ISO)

methoxychlor (EXP)

methylmercury chloride (ISO)

methylphenidate (ISO)

oxaliplatin (EXP)

pirinixic acid (ISO)

potassium chromate (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

tamoxifen (ISO)

temozolomide (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

topotecan (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

trovafloxacin (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

Golgi to lysosome transport (IBA,IEA,ISO,ISS)

Golgi vesicle transport (IEA)

protein transport (IEA)

Cellular Component

cytosol (IEA)

Golgi apparatus (IEA,ISO)

membrane (IEA)

trans-Golgi network (IBA,IEA,ISO,ISS)

Molecular Function

identical protein binding (IEA,ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Binding partners for the COOH-terminal appendage domains of the GGAs and gamma-adaptin.	Lui WW, etal., Mol Biol Cell 2003 Jun;14(6):2385-98. Epub 2003 Mar 20.
3.	GOA pipeline	RGD automated data pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:11591653	PMID:15489334	PMID:17596511

Genomics

Comparative Map Data

Ccdc91
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	182,132,931 - 182,304,948 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	182,132,942 - 182,304,948 (+)	Ensembl				GRCr8
mRatBN7.2	4	180,402,327 - 180,574,364 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	180,402,376 - 180,574,364 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	186,685,689 - 186,856,364 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	182,470,232 - 182,640,907 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	181,090,664 - 181,261,351 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	181,873,465 - 182,043,593 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	181,874,861 - 182,043,593 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	246,021,504 - 246,189,263 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	185,103,274 - 185,258,770 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	168,885,253 - 169,056,949 (+)	NCBI		Celera
RGSC_v3.1	4	185,348,397 - 185,503,894 (+)	NCBI
Cytogenetic Map	4	q44	NCBI

CCDC91
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	28,190,456 - 28,550,166 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	28,133,249 - 28,581,511 (+)	Ensembl			hg38	GRCh38
GRCh37	12	28,343,389 - 28,703,099 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	28,301,400 - 28,594,366 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	12	33,556,106 - 33,849,062 (+)	NCBI		Celera
Cytogenetic Map	12	p11.22	NCBI
HuRef	12	28,179,425 - 28,472,510 (+)	NCBI		HuRef
CHM1_1	12	28,375,515 - 28,668,272 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	28,062,559 - 28,422,616 (+)	NCBI		T2T-CHM13v2.0

Ccdc91
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	147,377,322 - 147,534,110 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	147,377,326 - 147,534,110 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	6	147,475,871 - 147,632,613 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	147,475,828 - 147,632,612 (+)	Ensembl			mm10	GRCm38
MGSCv37	6	147,424,393 - 147,581,134 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	6	147,433,041 - 147,589,782 (+)	NCBI		MGSCv36	mm8
Celera	6	150,517,430 - 150,681,959 (+)	NCBI		Celera
Cytogenetic Map	6	G3	NCBI
cM Map	6	78.22	NCBI

Ccdc91
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955505	6,266,918 - 6,535,059 (-)	Ensembl
ChiLan1.0	NW_004955505	6,269,667 - 6,613,191 (-)	NCBI	ChiLan1.0	ChiLan1.0

CCDC91
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	68,237,448 - 68,625,817 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	68,233,842 - 68,628,769 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	57,678,990 - 58,123,663 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	60,384,048 - 60,741,781 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	60,385,041 - 60,676,959 (-)	Ensembl			panPan2	panpan1.1

CCDC91
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	19,234,731 - 19,579,901 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	19,229,925 - 19,579,817 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	26,825,592 - 27,151,728 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	19,441,434 - 19,773,606 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	19,435,677 - 19,773,599 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	19,254,969 - 19,580,998 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	19,281,701 - 19,607,288 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	26,977,430 - 27,310,304 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ccdc91
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	81,197,835 - 81,520,217 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936760	486,621 - 735,719 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936760	413,066 - 735,508 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CCDC91
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	45,138,057 - 45,525,650 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	5	45,138,162 - 45,525,661 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	48,837,142 - 48,878,336 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CCDC91
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	27,913,958 - 28,267,606 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	27,914,739 - 28,267,599 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666069	6,773,329 - 7,131,452 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ccdc91
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624778	7,313,233 - 7,674,279 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624778	7,312,565 - 7,693,256 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ccdc91
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	6	5,137,049 - 5,307,959 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ccdc91
943 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	95
Count of miRNA genes:	71
Interacting mature miRNAs:	86
Transcripts:	ENSRNOT00000002527
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
6478754	Anxrr43	Anxiety related response QTL 43		0.14035	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	146370897	184426481	Rat
6478720	Alc23	Alcohol consumption QTL 23		0.00509	drinking behavior trait (VT:0001422)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	155834926	184426481	Rat
6478785	Anxrr53	Anxiety related response QTL 53		0.01397	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
1581566	Eae21	Experimental allergic encephalomyelitis QTL 21	6.2		body mass (VT:0001259)	maximum body weight loss to initial body weight ratio (CMO:0001400)	4	137447185	182447185	Rat
6478693	Anxrr32	Anxiety related response QTL 32		0.00092	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	4	146370897	184426481	Rat
6478757	Anxrr44	Anxiety related response QTL 44		0.01087	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
1578674	Bmd12	Bone mineral density QTL 12	3.8		femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	4	137430611	182430611	Rat
6478728	Anxrr36	Anxiety related response QTL 36		0.01061	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
738016	Alc16	Alcohol consumption QTL 16	3.6	0.00015	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	184426481	Rat
6478700	Anxrr33	Anxiety related response QTL 33		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	146370897	184426481	Rat
1298524	Oia8	Oil induced arthritis QTL 8			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	140059299	184426481	Rat
6478733	Anxrr37	Anxiety related response QTL 37		0.00095	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
10053718	Scort25	Serum corticosterone level QTL 25	2.15	0.0097	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	157292416	184426481	Rat
738009	Sach4	Saccharine consumption QTL 4	4.9	0.000016	consumption behavior trait (VT:0002069)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	60916264	184426481	Rat
61362	Oia2	Oil induced arthritis QTL 2		0.001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	140059299	184426481	Rat
6478737	Anxrr38	Anxiety related response QTL 38		0.00159	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
2293659	Bmd35	Bone mineral density QTL 35	4.5	0.0001	femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	4	160623982	184426481	Rat
10401796	Kidm48	Kidney mass QTL 48			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	4	147299608	184426481	Rat
6478718	Anxrr34	Anxiety related response QTL 34		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	146370897	184426481	Rat
6478782	Anxrr52	Anxiety related response QTL 52		0.02091	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
2316958	Gluco58	Glucose level QTL 58	10		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	12212457	182430611	Rat
6478748	Anxrr42	Anxiety related response QTL 42		0.28008	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	146370897	184426481	Rat

Markers in Region

BF405960

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	180,573,371 - 180,573,531 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	182,042,601 - 182,042,760	NCBI	Rnor6.0
Rnor_5.0	4	246,188,271 - 246,188,430	UniSTS	Rnor5.0
RGSC_v3.4	4	185,257,778 - 185,257,937	UniSTS	RGSC3.4
Celera	4	169,055,957 - 169,056,116	UniSTS
RH 3.4 Map	4	1092.8	UniSTS
Cytogenetic Map	4	q44	UniSTS

AI177144

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	180,574,322 - 180,574,541 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	182,043,552 - 182,043,770	NCBI	Rnor6.0
Rnor_5.0	4	246,189,222 - 246,189,440	UniSTS	Rnor5.0
RGSC_v3.4	4	185,258,729 - 185,258,947	UniSTS	RGSC3.4
Celera	4	169,056,908 - 169,057,126	UniSTS
RH 3.4 Map	4	1093.6	UniSTS
Cytogenetic Map	4	q44	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001014061	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237687	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107721	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286192	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286193	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286194	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC079135	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473964	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000002527 ⟹ ENSRNOP00000002527

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	182,132,956 - 182,304,948 (+)	Ensembl
mRatBN7.2 Ensembl	4	180,402,376 - 180,574,364 (+)	Ensembl
Rnor_6.0 Ensembl	4	181,874,861 - 182,043,593 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099526 ⟹ ENSRNOP00000097935

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	182,132,942 - 182,304,946 (+)	Ensembl
mRatBN7.2 Ensembl	4	180,402,376 - 180,574,364 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000108480 ⟹ ENSRNOP00000081556

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	182,132,960 - 182,304,948 (+)	Ensembl
mRatBN7.2 Ensembl	4	180,441,798 - 180,574,364 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119701 ⟹ ENSRNOP00000087761

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	182,132,956 - 182,304,948 (+)	Ensembl
mRatBN7.2 Ensembl	4	180,466,454 - 180,574,364 (+)	Ensembl

RefSeq Acc Id:

NM_001014061 ⟹ NP_001014083

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	182,132,973 - 182,304,948 (+)	NCBI
mRatBN7.2	4	180,402,376 - 180,574,364 (+)	NCBI
Rnor_6.0	4	181,874,861 - 182,043,593 (+)	NCBI
Rnor_5.0	4	246,021,504 - 246,189,263 (+)	NCBI
RGSC_v3.4	4	185,103,274 - 185,258,770 (+)	RGD
Celera	4	168,885,253 - 169,056,949 (+)	RGD

Sequence:

show sequence

TGGACGCCGGGTGGTGCGTGGGCTGCCCCAACGTGGGTTCCCGGACCCGCAGTCACCGGGAGGG
GGGTTGCGTGTCCCGTGTCCCGGAGCACGTGCCTGAAAGCCGGGTGTGACGCGCAATAGCGCGG
GGAGCACTGCGGCGGCGGCAGGAGCAGGAGCTGCCTAAAGAATGGATGATGACGACTTTGGTGG
CTTTGAGGCCGCAGAGACCTTTGACGGTGAGCAAGGTGGAAACCAAGCAGTGTCCCCTGCTGTC
CCCTGGGCCACCTTTCCTGCAGTATCCGGAGTGCGTCTCTCACCAGCTTCTCCGGAGCTTATCC
TGGACCATGACCGCTCATCCCCATCCTCTGGCCACCTCCGTTCTGATGCCGTCATTTCCTCACC
AGACGATACACGTGCAGACAGCAGCCTTGTGAATCAGACCATCTCAAAAGTTCAGCTTCAGCAG
TCAGCGCACACACATCTGAACATCCCTCTCTTCCCACTTGGGTTAACGGATGAGTCGAACCATG
GAGCACTTGCCCTGGAGGACGAGCCTGAGGGTCCTGGGGTCCACGTGTCCAACTCTCAGCTCCG
GCAGAAAATATCAAGTCTGGAGACTAAACTCAAGGCTTCTGAAGAAGAAAAGCAGCGAATTAAA
AAGGATGTGGAGTCGCTGATGGAGAAACACAGTGTCCTGGAGAAAGACTTCCTGAAGGAAAAGG
AGCAGGATGCTGTGTCCTTTCAAGCCAGATACCGTGAGCTTCAGGAGAAGCATAAACAAGAGTT
GGAAGACATGCGGAAGGCTGGGCACGAGGCGCTGAGCATTATAGTGGACGAGTACAAGGCACTT
CTGCAGTCCTCAGTTAAGCAGCAGCTAGATGCCATCGAGAAGCAGTATGTGTCTGCCATCGAGA
AACAAGCTCACCGCTGTGAGGAGCTCCTGCATGCTCAGCATCAGAGGCTCCTAGAAGTGCTGGA
CACCGAGAAGGAACTGCTAAAAGAGAAGATCCAGGAAGCTTTGACGCAGCAGTCACAGGAGCAG
AAGGAAACACTGGGAAAGTGCCTACAGGAGGAAATGCAGAAGAACAAAGAAACCCTGGAGTCCG
CTGTGAAGCTTGAGAAAGAAGCAATGAAAGATGTCATCACTAAAGCAGTGGAAGAAGAGAGGGA
AAATCTGGAGAAAGTTCACGCCGAAGAAAGAGAAATGTGGAAGACAGAACATGCAAGAGATCAG
GAGAGGGTAGCAGAGGCCATCCAGGCCGCTGTGCAGGAGCAGCAGAGGATGAGTCAGGAAGCCG
TCAAGGCCGCAATCGCAGAGGAGCAGAGGCGAAGTGAAAAGGCCATGGAGGAAGCCGTAAAGAG
AACAAGGGATGAGCTGGTGGAGTACGTGAGGGAGCAGAGAAGGCTTGATCAAGTCACCCGCCAG
CGTAGCCTGTCCAGTCTGGAGCTGTTCCTCTCCTGCGCCCAGAAGCAGCTGAGTGCGTTGATAG
CTACGGAGCCTGTTGACATTGAATAGAGACACAGCTGATCCGTCCTGGTCGTTAAGCCTGCCCA
CTCTGAAGCTGTTCGTCTCCTGGGCCCAGAAGCAGCTGAGTGCTCTAATGGCCATAGATCCTGG
TGGCATTGAATAAAGGGCACGTGATGGGCTGCCTTGCCCTGGGCCATTGCGTCAGTCACTAGAC
TTCTAAGTTAGATGCTGTGACTTAGACAAATGCTCTTGTTTCCCGTTTAAACCTGGAAAGCGGT
TTCCAGTCCCAGGACAAGCCAGAGCAGTATCCAGAAGACCCATCAACAGATCTAACTTACTCTC
CGCTGTTTTATCATGAGTAGTGATGGAAGAGTGTCTGTGACCCAAAGTCAAGGAAAAGTGGTGT
GTTATCCGAAGTTCATCGGGTAAACCGTACAGCTTCAGGTGACCTGATGACATTGTATTGGTAA
AGGTTTACCTTGTGACCACCTCAAGGTGACGTGCAGGGAGCAACCACTGTGCAACCATGCATTT
ACTTGATTCTAAGTAGTGAGAGCAGAAACATTGGCTCAGCCATTGTTCTGACTAACCTGTCCTC
TTCCCCACACGCGACCCCACGTGTTCCCATAGATTTACCAAAAGTGAACAACACTGGCTGGCCA
GGCTTCCGGCAGCTGCCCCATGTAAACTGGGGTGTGTGGCCCAGGCTTGCTTCCTGCCTTCTTC
AAAGGCTCGAGATCATGTTTCATAATCTATTATCTGGAAAGAGCATCACTCAGACATCTGCACA
TCTATTTAATCAAACAACAGGCATAAGGGGTGAACTGGGATGGTCATGCCTCACGAGCAGTGTG
CTCCACATCGTGAGCGGTTTGAACCTCCGGGGCACTGTGCTCGGCTCACTTCCTGCTCACTTCC
TGCAGTGCTTCTGCTTCCTGGGGCTTTGTATTTTTCTGGGATTTCTCGGCATAATAAAAGGAAC
TCCAAAAGGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006237685 ⟹ XP_006237747

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	182,132,932 - 182,304,948 (+)	NCBI
mRatBN7.2	4	180,402,327 - 180,574,364 (+)	NCBI
Rnor_6.0	4	181,873,465 - 182,043,593 (+)	NCBI
Rnor_5.0	4	246,021,504 - 246,189,263 (+)	NCBI

Sequence:

show sequence

CACTTTCTTGACTACCAGACTCTAGATGTACAAGGAGAAATGGAAAACAGCTTGCTGAGTATAC
AAGTAAGAAGTGGTCCTTGACTTGTCACTGAACTGGTAATAAAAGTATACATGTGTAAAGAAGC
ATCAGATTTATCTAAGAGAAACACACCTTGTTTCTGCAAAGAATGGGTGGGGTGGAAAAAGATC
AGAAGAGGTGATCTTCTCAGGATTACAGCCGTTCACTAATGATTTCAGGTTGCCCAGTTCAGTG
GATTTGTGTCAAGATCCGGTTGACACTTCCCACTTTGATTAGAGATTAAAGACAGTTCAATTTT
GTTCCATGGAAGGAAGAGAAAAGCAATTCCCAACAAATGCCCCTTGTATGAAGAGTAGAAGTTG
CCCACAGACTTACACTCAAAGATTAGGGTACTGGGCAGTAAAACATCTTGGACGTATCTAGTTC
ACTCCCAGATTGTTACCACTTGACTAGTCCCAAGTAAATAGCACACATTCAATAAAAATTAAGT
GAATGTTGTTTAAATCATCTGAGAAGTGTGCTATCTGTTGACCATTTCCACGTAACAGTCATGA
CAGTCTATACAACTACTCTCCCCTTCAAACAAAAACCTATCAAGTATGTGTGTGTGTCTTCCCC
TCAGGAAAAGGACAGCTTTGATATAAGGATGTCGAGCGGCTGAAAAATCAACCATCTTTAACAG
AATATGAATGAACTGCTATGATAGAGTGATTACAGGTGCTATAGTCCCAGCGCCACGGATCTTC
AAAATTCAGAGAAGCTTTCAGCCTAGTAACGTTCAGGAACTTGAGAGTTCTGCTAAGCCAACAG
GACCAGACAGCATGTCAAACATTTCTTGAGCAAGTCATAGTGCCAGGTGCTTTATTCAGTTCTC
AATTTTTTTTGGTTGCTTGTAAGAGGCAAAGGGAGCAGAAGGCTCTTCTGTGGTAGATTCGAGT
TCTGGACAGGAGAAAGATTTTGATTTGGTATGTGGTTTGATGGGTCTGCCACTAAGGGAGAGTG
AGAACCCTTACTAGGAGGTAGATCTTGAGAAAGGTCAGGAAAAGCATTAAGTCGAAGCCAATCT
ATCGCAGAGAGCAATTACCTGAGGATCACTCAACTAGGAGGTTCTTCTTGTGCCCTAGCCTGCT
GAATCTCTTGTAGGAGGAATATTTAGTGGATAGTTTGTTTTGGCTCAGGACAAAGTTTAAGGGA
CGGATCAGGATGGTCAGGGTAGTGAAACCAGGTTAGTCCATTTCACAGGTTAGGTCTCTCTCCA
GATGAGGCTCAGCTGGCCTCAGCTTGGGGGTCATGTGATGCGACCGCGGATGACTGGAGCGCCG
CGCGCAGGCCTGGGCGGGCCTAGGTGGAAATCAACTTCCGGTGAGGAGGTTCTGGACGCCGGGT
GGTGCGTGGGCTGCCCCAACGTGGGTTCCCGGACCCGCAGTCACCGGGAGGGGGGTTGCGTGTC
CCGTGTCCCGGAGCACGTGCCTGAAAGCCGGGTGTGACGCGCAATAGCGCGGGGAGCACTGCGG
CGGCGGCAGGAGCAGGAGCTGCCTAAAGAATGGATGATGACGACTTTGGTGGCTTTGAGGCCGC
AGAGACCTTTGACGGTGAGCAAGGTGGAAACCAAGCAGTGTCCCCTGCTGTCCCCTGGGCCACC
TTTCCTGCAGTATCCGGAGTGCGTCTCTCACCAGCTTCTCCGGAGCTTATCCTGGACCATGACC
GCTCATCCCCATCCTCTGGCCACCTCCGTTCTGATGCCGTCATTTCCTCACCAGACGATACACG
TGCAGACAGCAGCCTTGTGAATCAGACCATCTCAAAAGTTCAGCTTCAGCAGTCAGCGCACACA
CATCTGAACATCCCTCTCTTCCCACTTGGGTTAACGGATGAGTCGAACCATGGAGCACTTGCCC
TGGAGGACGAGCCTGAGGGTCCTGGGGTCCACGTGTCCAACTCTCAGCTCCGGCAGAAAATATC
AAGTCTGGAGACTAAACTCAAGGCTTCTGAAGAAGAAAAGCAGCGAATTAAAAAGGATGTGGAG
TCGCTGATGGAGAAACACAGTGTCCTGGAGAAAGACTTCCTGAAGGAAAAGGAGCAGGATGCTG
TGTCCTTTCAAGCCAGATACCGTGAGCTTCAGGCACTTCTGCAGTCCTCAGTTAAGCAGCAGCT
AGATGCCATCGAGAAGCAGTATGTGTCTGCCATCGAGAAACAAGCTCACCGCTGTGAGGAGCTC
CTGCATGCTCAGCATCAGAGGCTCCTAGAAGTGCTGGACACCGAGAAGGAACTGCTAAAAGAGA
AGATCCAGGAAGCTTTGACGCAGCAGTCACAGGAGCAGAAGGAAACACTGGGAAAGTGCCTACA
GGAGGAAATGCAGAAGAACAAAGAAACCCTGGAGTCCGCTGTGAAGCTTGAGAAAGAAGCAATG
AAAGATGTCATCACTAAAGCAGTGGAAGAAGAGAGGGAAAATCTGGAGAAAGTTCACGCCGAAG
AAAGAGAAATGTGGAAGACAGAACATGCAAGAGATCAGGAGAGGGTAGCAGAGGCCATCCAGGC
CGCTGTGCAGGAGCAGCAGAGGATGAGTCAGGAAGCCGTCAAGGCCGCAATCGCAGAGGAGCAG
AGGCGAAGTGAAAAGGCCATGGAGGAAGCCGTAAAGAGAACAAGGGATGAGCTGGTGGAGTACG
TGAGGGAGCAGAGAAGGCTTGATCAAGTCACCCGCCAGCGTAGCCTGTCCAGTCTGGAGCTGTT
CCTCTCCTGCGCCCAGAAGCAGCTGAGTGCGTTGATAGCTACGGAGCCTGTTGACATTGAATAG
AGACACAGCTGATCCGTCCTGGTCGTTAAGCCTGCCCACTCTGAAGCTGTTCGTCTCCTGGGCC
CAGAAGCAGCTGAGTGCTCTAATGGCCATAGATCCTGGTGGCATTGAATAAAGGGCACGTGATG
GGCTGCCTTGCCCTGGGCCATTGCGTCAGTCACTAGACTTCTAAGTTAGATGCTGTGACTTAGA
CAAATGCTCTTGTTTCCCGTTTAAACCTGGAAAGCGGTTTCCAGTCCCAGGACAAGCCAGAGCA
GTATCCAGAAGACCCATCAACAGATCTAACTTACTCTCCGCTGTTTTATCATGAGTAGTGATGG
AAGAGTGTCTGTGACCCAAAGTCAAGGAAAAGTGGTGTGTTATCCGAAGTTCATCGGGTAAACC
GTACAGCTTCAGGTGACCTGATGACATTGTATTGGTAAAGGTTTACCTTGTGACCACCTCAAGG
TGACGTGCAGGGAGCAACCACTGTGCAACCATGCATTTACTTGATTCTAAGTAGTGAGAGCAGA
AACATTGGCTCAGCCATTGTTCTGACTAACCTGTCCTCTTCCCCACACGCGACCCCACGTGTTC
CCATAGATTTACCAAAAGTGAACAACACTGGCTGGCCAGGCTTCCGGCAGCTGCCCCATGTAAA
CTGGGGTGTGTGGCCCAGGCTTGCTTCCTGCCTTCTTCAAAGGCTCGAGATCATGTTTCATAAT
CTATTATCTGGAAAGAGCATCACTCAGACATCTGCACATCTATTTAATCAAACAACAGGCATAA
GGGGTGAACTGGGATGGTCATGCCTCACGAGCAGTGTGCTCCACATCGTGAGCGGTTTGAACCT
CCGGGGCACTGTGCTCGGCTCACTTCCTGCTCACTTCCTGCAGTGCTTCTGCTTCCTGGGGCTT
TGTATTTTTCTGGGATTTCTCGGCATAATAAAAGGAACTCCAAAAGGTC

hide sequence

RefSeq Acc Id:

XM_006237686 ⟹ XP_006237748

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	182,197,026 - 182,304,948 (+)	NCBI
mRatBN7.2	4	180,466,457 - 180,574,364 (+)	NCBI
Rnor_6.0	4	181,935,964 - 182,043,593 (+)	NCBI

Sequence:

show sequence

CACAGTTTGGTATGTAATATTTTAAGGCCATTATTTCTTAAACACTCAATATTTTTAGCTAAAA
GCAGGTAATCGGAATCCCCCTGTGATTCAGTGGATAGGGAGGCAGGTGCGTGATCCCAGAGAAG
CTGGTTGTCCCTGTCCTGGGACGGACACACCACGCTGAGTCCCAGTCACTGCTGTGCTCACACT
GTTCACCGGCACCTCTGCTGTTAAATGCTGCATTTGTCAGCTCACTTAAGCTTTCCAATGCAAT
TTCCCTGCTTTAAGAGGACACTGTGAACCTGAAGAGGTCATGTAATTTGCTGAAGGCTGTAGGT
CAGGGAAGTGGCTGTTGTTCCCATTGGAAGCCCAGTCTGAGCTCTGGGTTGGCTTGTCTGGGCA
GTGGTACTGTGATGTCATAGAGGCCCTGGACAGTGTGGCAAAGGTTTACATGTTAGCAGCACAG
GGAGACTGGATGAGATATCACTGGCTTGGCAGATCCAGTGTTCAGTTAATGAGAGTGAAACATG
AGGCCAATCTGGGCTGTGTGAAGTGATAATTTGCCATAATGTGCCTGTGGGACATCTAAATGGA
TCCTTGTGGTAATCAGGGGAACACGCAGTCTCCATTGTGAGCCATCTTCAGAGTTTGTGGTAGG
ACCCGCGGACAGAGCTACTGATGCCAATGTGGAATAAAGTATCCGGAGTGCGTCTCTCACCAGC
TTCTCCGGAGCTTATCCTGGACCATGACCGCTCATCCCCATCCTCTGGCCACCTCCGTTCTGAT
GCCGTCATTTCCTCACCAGACGATACACGTGCAGACAGCAGCCTTGTGAATCAGACCATCTCAA
AAGTTCAGCTTCAGCAGTCAGCGCACACACATCTGAACATCCCTCTCTTCCCACTTGGGTTAAC
GGATGAGTCGAACCATGGAGCACTTGCCCTGGAGGACGAGCCTGAGGGTCCTGGGGTCCACGTG
TCCAACTCTCAGCTCCGGCAGAAAATATCAAGTCTGGAGACTAAACTCAAGGCTTCTGAAGAAG
AAAAGCAGCGAATTAAAAAGGATGTGGAGTCGCTGATGGAGAAACACAGTGTCCTGGAGAAAGA
CTTCCTGAAGGAAAAGGAGCAGGATGCTGTGTCCTTTCAAGCCAGATACCGTGAGCTTCAGGAG
AAGCATAAACAAGAGTTGGAAGACATGCGGAAGGCTGGGCACGAGGCGCTGAGCATTATAGTGG
ACGAGTACAAGGCACTTCTGCAGTCCTCAGTTAAGCAGCAGCTAGATGCCATCGAGAAGCAGTA
TGTGTCTGCCATCGAGAAACAAGCTCACCGCTGTGAGGAGCTCCTGCATGCTCAGCATCAGAGG
CTCCTAGAAGTGCTGGACACCGAGAAGGAACTGCTAAAAGAGAAGATCCAGGAAGCTTTGACGC
AGCAGTCACAGGAGCAGAAGGAAACACTGGGAAAGTGCCTACAGGAGGAAATGCAGAAGAACAA
AGAAACCCTGGAGTCCGCTGTGAAGCTTGAGAAAGAAGCAATGAAAGATGTCATCACTAAAGCA
GTGGAAGAAGAGAGGGAAAATCTGGAGAAAGTTCACGCCGAAGAAAGAGAAATGTGGAAGACAG
AACATGCAAGAGATCAGGAGAGGGTAGCAGAGGCCATCCAGGCCGCTGTGCAGGAGCAGCAGAG
GATGAGTCAGGAAGCCGTCAAGGCCGCAATCGCAGAGGAGCAGAGGCGAAGTGAAAAGGCCATG
GAGGAAGCCGTAAAGAGAACAAGGGATGAGCTGGTGGAGTACGTGAGGGAGCAGAGAAGGCTTG
ATCAAGTCACCCGCCAGCGTAGCCTGTCCAGTCTGGAGCTGTTCCTCTCCTGCGCCCAGAAGCA
GCTGAGTGCGTTGATAGCTACGGAGCCTGTTGACATTGAATAGAGACACAGCTGATCCGTCCTG
GTCGTTAAGCCTGCCCACTCTGAAGCTGTTCGTCTCCTGGGCCCAGAAGCAGCTGAGTGCTCTA
ATGGCCATAGATCCTGGTGGCATTGAATAAAGGGCACGTGATGGGCTGCCTTGCCCTGGGCCAT
TGCGTCAGTCACTAGACTTCTAAGTTAGATGCTGTGACTTAGACAAATGCTCTTGTTTCCCGTT
TAAACCTGGAAAGCGGTTTCCAGTCCCAGGACAAGCCAGAGCAGTATCCAGAAGACCCATCAAC
AGATCTAACTTACTCTCCGCTGTTTTATCATGAGTAGTGATGGAAGAGTGTCTGTGACCCAAAG
TCAAGGAAAAGTGGTGTGTTATCCGAAGTTCATCGGGTAAACCGTACAGCTTCAGGTGACCTGA
TGACATTGTATTGGTAAAGGTTTACCTTGTGACCACCTCAAGGTGACGTGCAGGGAGCAACCAC
TGTGCAACCATGCATTTACTTGATTCTAAGTAGTGAGAGCAGAAACATTGGCTCAGCCATTGTT
CTGACTAACCTGTCCTCTTCCCCACACGCGACCCCACGTGTTCCCATAGATTTACCAAAAGTGA
ACAACACTGGCTGGCCAGGCTTCCGGCAGCTGCCCCATGTAAACTGGGGTGTGTGGCCCAGGCT
TGCTTCCTGCCTTCTTCAAAGGCTCGAGATCATGTTTCATAATCTATTATCTGGAAAGAGCATC
ACTCAGACATCTGCACATCTATTTAATCAAACAACAGGCATAAGGGGTGAACTGGGATGGTCAT
GCCTCACGAGCAGTGTGCTCCACATCGTGAGCGGTTTGAACCTCCGGGGCACTGTGCTCGGCTC
ACTTCCTGCTCACTTCCTGCAGTGCTTCTGCTTCCTGGGGCTTTGTATTTTTCTGGGATTTCTC
GGCATAATAAAAGGAACTCCAAAAGGTC

hide sequence

RefSeq Acc Id:

XM_006237687 ⟹ XP_006237749

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	182,197,041 - 182,304,948 (+)	NCBI
mRatBN7.2	4	180,466,456 - 180,574,364 (+)	NCBI
Rnor_6.0	4	181,935,964 - 182,043,593 (+)	NCBI
Rnor_5.0	4	246,021,504 - 246,189,263 (+)	NCBI

Sequence:

show sequence

CACAGTTTGGTATGTAATATTTTAAGGCCATTATTTCTTAAACACTCAATATTTTTAGCTAAAA
GCAGGTAATCGGAATCCCCCTGTGATTCAGTGGATAGGGAGGCAGGTGCGTGATCCCAGAGAAG
CTGGTTGTCCCTGTCCTGGGACGGACACACCACGCTGAGTCCCAGTCACTGCTGTGCTCACACT
GTTCACCGGCACCTCTGCTGTTAAATGCTGCATTTGTCAGCTCACTTAAGCTTTCCAATGCAAT
TTCCCTGCTTTAAGAGGACACTGTGAACCTGAAGAGGTCATGTAATTTGCTGAAGGCTGTAGGT
CAGGGAAGTGGCTGTTGTTCCCATTGGAAGCCCAGTCTGAGCTCTGGGTTGGCTTGTCTGGGCA
GTGGTACTGTGATGTCATAGAGGCCCTGGACAGTGTGGCAAAGGTTTACATGTTAGCAGCACAG
GGAGACTGGATGAGATATCACTGGCTTGGCAGATCCAGTGTTCAGTTAATGAGAGTGAAACATG
AGGCCAATCTGGGCTGTGTGAAGTGATAATTTGCCATAATGTGCCTGTGGGACATCTAAATGGA
TCCTTGTGGTAATCAGGGGAACACGCAGTCTCCATTGTGAGCCATCTTCAGAGTTTGTGGTAGG
ACCCGCGGACAGAGCTACTGATGCCAATGTGGAATAAAGTATCCGGAGTGCGTCTCTCACCAGC
TTCTCCGGAGCTTATCCTGGACCATGACCGCTCATCCCCATCCTCTGGCCACCTCCGTTCTGAT
GCCGTCATTTCCTCACCAGACGATACACGTGCAGACAGCAGCCTTGTGAATCAGACCATCTCAA
AAGTTCAGCTTCAGCAGTCAGCGCACACACATCTGAACATCCCTCTCTTCCCACTTGGGTTAAC
GGATGAGTCGAACCATGGAGCACTTGCCCTGGAGGACGAGCCTGAGGGTCCTGGGGTCCACGTG
TCCAACTCTCAGCTCCGGCAGAAAATATCAAGTCTGGAGACTAAACTCAAGGCTTCTGAAGAAG
AAAAGCAGCGAATTAAAAAGGATGTGGAGTCGCTGATGGAGAAACACAGTGTCCTGGAGAAAGA
CTTCCTGAAGGAAAAGGAGCAGGATGCTGTGTCCTTTCAAGCCAGATACCGTGAGCTTCAGGCA
CTTCTGCAGTCCTCAGTTAAGCAGCAGCTAGATGCCATCGAGAAGCAGTATGTGTCTGCCATCG
AGAAACAAGCTCACCGCTGTGAGGAGCTCCTGCATGCTCAGCATCAGAGGCTCCTAGAAGTGCT
GGACACCGAGAAGGAACTGCTAAAAGAGAAGATCCAGGAAGCTTTGACGCAGCAGTCACAGGAG
CAGAAGGAAACACTGGGAAAGTGCCTACAGGAGGAAATGCAGAAGAACAAAGAAACCCTGGAGT
CCGCTGTGAAGCTTGAGAAAGAAGCAATGAAAGATGTCATCACTAAAGCAGTGGAAGAAGAGAG
GGAAAATCTGGAGAAAGTTCACGCCGAAGAAAGAGAAATGTGGAAGACAGAACATGCAAGAGAT
CAGGAGAGGGTAGCAGAGGCCATCCAGGCCGCTGTGCAGGAGCAGCAGAGGATGAGTCAGGAAG
CCGTCAAGGCCGCAATCGCAGAGGAGCAGAGGCGAAGTGAAAAGGCCATGGAGGAAGCCGTAAA
GAGAACAAGGGATGAGCTGGTGGAGTACGTGAGGGAGCAGAGAAGGCTTGATCAAGTCACCCGC
CAGCGTAGCCTGTCCAGTCTGGAGCTGTTCCTCTCCTGCGCCCAGAAGCAGCTGAGTGCGTTGA
TAGCTACGGAGCCTGTTGACATTGAATAGAGACACAGCTGATCCGTCCTGGTCGTTAAGCCTGC
CCACTCTGAAGCTGTTCGTCTCCTGGGCCCAGAAGCAGCTGAGTGCTCTAATGGCCATAGATCC
TGGTGGCATTGAATAAAGGGCACGTGATGGGCTGCCTTGCCCTGGGCCATTGCGTCAGTCACTA
GACTTCTAAGTTAGATGCTGTGACTTAGACAAATGCTCTTGTTTCCCGTTTAAACCTGGAAAGC
GGTTTCCAGTCCCAGGACAAGCCAGAGCAGTATCCAGAAGACCCATCAACAGATCTAACTTACT
CTCCGCTGTTTTATCATGAGTAGTGATGGAAGAGTGTCTGTGACCCAAAGTCAAGGAAAAGTGG
TGTGTTATCCGAAGTTCATCGGGTAAACCGTACAGCTTCAGGTGACCTGATGACATTGTATTGG
TAAAGGTTTACCTTGTGACCACCTCAAGGTGACGTGCAGGGAGCAACCACTGTGCAACCATGCA
TTTACTTGATTCTAAGTAGTGAGAGCAGAAACATTGGCTCAGCCATTGTTCTGACTAACCTGTC
CTCTTCCCCACACGCGACCCCACGTGTTCCCATAGATTTACCAAAAGTGAACAACACTGGCTGG
CCAGGCTTCCGGCAGCTGCCCCATGTAAACTGGGGTGTGTGGCCCAGGCTTGCTTCCTGCCTTC
TTCAAAGGCTCGAGATCATGTTTCATAATCTATTATCTGGAAAGAGCATCACTCAGACATCTGC
ACATCTATTTAATCAAACAACAGGCATAAGGGGTGAACTGGGATGGTCATGCCTCACGAGCAGT
GTGCTCCACATCGTGAGCGGTTTGAACCTCCGGGGCACTGTGCTCGGCTCACTTCCTGCTCACT
TCCTGCAGTGCTTCTGCTTCCTGGGGCTTTGTATTTTTCTGGGATTTCTCGGCATAATAAAAGG
AACTCCAAAAGGTC

hide sequence

RefSeq Acc Id:

XM_008763456 ⟹ XP_008761678

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	182,167,430 - 182,304,948 (+)	NCBI
mRatBN7.2	4	180,436,843 - 180,574,364 (+)	NCBI
Rnor_6.0	4	181,905,992 - 182,043,593 (+)	NCBI

Sequence:

show sequence

GTGGTCGAATGGGGGTTTTGGTACAGCTATTCTGTGTTTACATTATAGCAGTTATATATGCTCA
GGACAGGAGTGGGCTGTGTACGTCTCTTGTCCGGTGTCTTGGTTTCTGTTTTCAGTCAGCTAAC
ATTGTACTCCATAACGCAGCTCTAAACCTCCTCCCCAGTGCTGAAAATTCCACTCATGATGGCA
AGCCTTGACGGGGGTCTGTTATTTGCCTTGGCTTGAACATGTCTCCTAGGAGCTTCTTGACCGT
ATGCAGTCTCCTGGCCCTTCCTGACATGGAGGCAGTTTACCTGCATGAGAGGTGGATTTCCTAG
TCTCATGTCTTCTTTATTGTCTTACACAATTTTTTTTCTTTGTCTTTTTGTGGCCCTGGGGGTT
TTGAACCCAGAACCCAGGACCCTATGCATGCTGGACCAGCACTCTGCATTGACTCATCCCCATC
TCCACTAGACATTTGTAAGAAAGAGTCTGTGGAATAAAGACACCTCGTGGGTGTGGACATGACT
TTATTCTTTCCTGAACTCGATGAGCTATTTGGCTGGCTGGTTGTAGGACTTTGTGGTGCACATA
ATTTCCCTCTGAGCCCCTCCCAGTGCCTTCTGCCTTCCCGAGGCTGCTGCTTGAAGCCTTCCCG
CTTGGTGGAGCCTGCTTTACCTTCGGAGGCCCACGTAGTCTTACAAAAGAAAGGTTTTCGAATT
TCTTTGCTAGTGATTTTGGAGTTCTTTATAGAATTCCCCTGATCAACTATTGCATAGCTTGATC
TGAAACTTGATACTTCACTCATTTTCCATTTTCTTGTATATGTTTCATTTTAAGGGAGTTTCCC
CTTATTTTCCATTCCACAATTCTTTATTTCATCAATCATAATTTACATGTCTAAGACCTGTCAG
TCTCACCTTCTCCCGCTCCCACTCTTTCTTCACAAACTTAGGGAGTTCTGTTTTTGGTTCAGTG
GTGTGCGTCCTGCTGTTAGCTTTCTGAGGGTACTCTGTGTGCGTAGGACTTGCACTTTCCTCCA
CCCATTCCTGGTGTGGTTGTCTGGTCTCTGTATCTTGGCTGTTACTCCCAAGTGTCCTGGGAAT
CCTGTTCATAAGTGTCTTAGGGTTTTTCCTGCTGTGAAGAGACACCGTGGCCATGGCAACTGCG
TTATAAGAGTTCAGGGAGACTTGGTGCTGGAGAGGGACTGAGAGTTGTACATCTGGGTGCTCAG
GCACCAGGGAGGAAGAGTGACCTTGGGCCTGGCTTGAGCTTCTGAAACTTAACCCACCTCTGGT
GACACACTCCATTAAGGCCACACCTCCTAATTGTCCCCCTCCTTATGAGCCTGTTTTCATTCAA
AGCACTGCAGTCTGTGAGACTGAGGCTGATGGTGAACGTGTGCAGATGGAGTGTGTAGGGTTGG
GCTCCTGTTCCAGGCTTTTCACTTCTCTTTTGGCATGTTTAATGTCTTCAGTGGCCTCTGGAGT
AGCACAAATGTTTAAGTTCCATGTCCACTGCAGCATAGTTCATGTCAGATCTGGAATTTGAACC
TAGGGAGCTGGATACCACCCTTCCTTCCTTCTAGCCTTCATGCTAGTCTGTCTCTTAATGAAAT
CAGGAGCTAACGGGAAACACAGTGCAATGGATATCTTTTATCCGGGTAGCGTCCGAGAGTACAG
ACAAGCAGGAGGAGCAGTCTCACTTGAGTTGCAGCTTGTTCAGCTGCAGTGGTGAAAGTGGGCC
GAGCTCCCTGCTCTCAGATCCTCACAGGGGCAAAGAGCTGAGCTGCCTAAAGAATGGATGATGA
CGACTTTGGTGGCTTTGAGGCCGCAGAGACCTTTGACGGTGAGCAAGGTGGAAACCAAGCAGTG
TCCCCTGCTGTCCCCTGGGCCACCTTTCCTGCAGTATCCGGAGTGCGTCTCTCACCAGCTTCTC
CGGAGCTTATCCTGGACCATGACCGCTCATCCCCATCCTCTGGCCACCTCCGTTCTGATGCCGT
CATTTCCTCACCAGACGATACACGTGCAGACAGCAGCCTTGTGAATCAGACCATCTCAAAAGTT
CAGCTTCAGCAGTCAGCGCACACACATCTGAACATCCCTCTCTTCCCACTTGGGTTAACGGATG
AGTCGAACCATGGAGCACTTGCCCTGGAGGACGAGCCTGAGGGTCCTGGGGTCCACGTGTCCAA
CTCTCAGCTCCGGCAGAAAATATCAAGTCTGGAGACTAAACTCAAGGCTTCTGAAGAAGAAAAG
CAGCGAATTAAAAAGGATGTGGAGTCGCTGATGGAGAAACACAGTGTCCTGGAGAAAGACTTCC
TGAAGGAAAAGGAGCAGGATGCTGTGTCCTTTCAAGCCAGATACCGTGAGCTTCAGGAGAAGCA
TAAACAAGAGTTGGAAGACATGCGGAAGGCTGGGCACGAGGCGCTGAGCATTATAGTGGACGAG
TACAAGGCACTTCTGCAGTCCTCAGTTAAGCAGCAGCTAGATGCCATCGAGAAGCAGTATGTGT
CTGCCATCGAGAAACAAGCTCACCGCTGTGAGGAGCTCCTGCATGCTCAGCATCAGAGGCTCCT
AGAAGTGCTGGACACCGAGAAGGAACTGCTAAAAGAGAAGATCCAGGAAGCTTTGACGCAGCAG
TCACAGGAGCAGAAGGAAACACTGGGAAAGTGCCTACAGGAGGAAATGCAGAAGAACAAAGAAA
CCCTGGAGTCCGCTGTGAAGCTTGAGAAAGAAGCAATGAAAGATGTCATCACTAAAGCAGTGGA
AGAAGAGAGGGAAAATCTGGAGAAAGTTCACGCCGAAGAAAGAGAAATGTGGAAGACAGAACAT
GCAAGAGATCAGGAGAGGGTAGCAGAGGCCATCCAGGCCGCTGTGCAGGAGCAGCAGAGGATGA
GTCAGGAAGCCGTCAAGGCCGCAATCGCAGAGGAGCAGAGGCGAAGTGAAAAGGCCATGGAGGA
AGCCGTAAAGAGAACAAGGGATGAGCTGGTGGAGTACGTGAGGGAGCAGAGAAGGCTTGATCAA
GTCACCCGCCAGCGTAGCCTGTCCAGTCTGGAGCTGTTCCTCTCCTGCGCCCAGAAGCAGCTGA
GTGCGTTGATAGCTACGGAGCCTGTTGACATTGAATAGAGACACAGCTGATCCGTCCTGGTCGT
TAAGCCTGCCCACTCTGAAGCTGTTCGTCTCCTGGGCCCAGAAGCAGCTGAGTGCTCTAATGGC
CATAGATCCTGGTGGCATTGAATAAAGGGCACGTGATGGGCTGCCTTGCCCTGGGCCATTGCGT
CAGTCACTAGACTTCTAAGTTAGATGCTGTGACTTAGACAAATGCTCTTGTTTCCCGTTTAAAC
CTGGAAAGCGGTTTCCAGTCCCAGGACAAGCCAGAGCAGTATCCAGAAGACCCATCAACAGATC
TAACTTACTCTCCGCTGTTTTATCATGAGTAGTGATGGAAGAGTGTCTGTGACCCAAAGTCAAG
GAAAAGTGGTGTGTTATCCGAAGTTCATCGGGTAAACCGTACAGCTTCAGGTGACCTGATGACA
TTGTATTGGTAAAGGTTTACCTTGTGACCACCTCAAGGTGACGTGCAGGGAGCAACCACTGTGC
AACCATGCATTTACTTGATTCTAAGTAGTGAGAGCAGAAACATTGGCTCAGCCATTGTTCTGAC
TAACCTGTCCTCTTCCCCACACGCGACCCCACGTGTTCCCATAGATTTACCAAAAGTGAACAAC
ACTGGCTGGCCAGGCTTCCGGCAGCTGCCCCATGTAAACTGGGGTGTGTGGCCCAGGCTTGCTT
CCTGCCTTCTTCAAAGGCTCGAGATCATGTTTCATAATCTATTATCTGGAAAGAGCATCACTCA
GACATCTGCACATCTATTTAATCAAACAACAGGCATAAGGGGTGAACTGGGATGGTCATGCCTC
ACGAGCAGTGTGCTCCACATCGTGAGCGGTTTGAACCTCCGGGGCACTGTGCTCGGCTCACTTC
CTGCTCACTTCCTGCAGTGCTTCTGCTTCCTGGGGCTTTGTATTTTTCTGGGATTTCTCGGCAT
AATAAAAGGAACTCCAAAAGGTC

hide sequence

RefSeq Acc Id:

XM_039107721 ⟹ XP_038963649

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	182,132,933 - 182,304,948 (+)	NCBI
mRatBN7.2	4	180,402,328 - 180,574,364 (+)	NCBI

RefSeq Acc Id:

XM_063286190 ⟹ XP_063142260

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	182,132,933 - 182,304,948 (+)	NCBI

RefSeq Acc Id:

XM_063286192 ⟹ XP_063142262

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	182,132,933 - 182,304,948 (+)	NCBI

RefSeq Acc Id:

XM_063286193 ⟹ XP_063142263

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	182,167,430 - 182,304,948 (+)	NCBI

RefSeq Acc Id:

XM_063286194 ⟹ XP_063142264

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	182,132,931 - 182,304,948 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001014083	(Get FASTA)	NCBI Sequence Viewer
	XP_006237747	(Get FASTA)	NCBI Sequence Viewer
	XP_006237748	(Get FASTA)	NCBI Sequence Viewer
	XP_006237749	(Get FASTA)	NCBI Sequence Viewer
	XP_008761678	(Get FASTA)	NCBI Sequence Viewer
	XP_038963649	(Get FASTA)	NCBI Sequence Viewer
	XP_063142260	(Get FASTA)	NCBI Sequence Viewer
	XP_063142262	(Get FASTA)	NCBI Sequence Viewer
	XP_063142263	(Get FASTA)	NCBI Sequence Viewer
	XP_063142264	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH79135	(Get FASTA)	NCBI Sequence Viewer
	EDM01393	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000002527
	ENSRNOP00000002527.6
	ENSRNOP00000081556
	ENSRNOP00000097935
GenBank Protein	Q6AY97	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001014083 ⟸ NM_001014061

- UniProtKB:

Q6AY97 (UniProtKB/Swiss-Prot), A0A8I6G845 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDDDDFGGFEAAETFDGEQGGNQAVSPAVPWATFPAVSGVRLSPASPELILDHDRSSPSSGHLR
SDAVISSPDDTRADSSLVNQTISKVQLQQSAHTHLNIPLFPLGLTDESNHGALALEDEPEGPGV
HVSNSQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKDFLKEKEQDAVSFQARYREL
QEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQLDAIEKQYVSAIEKQAHRCEELLHAQH
QRLLEVLDTEKELLKEKIQEALTQQSQEQKETLGKCLQEEMQKNKETLESAVKLEKEAMKDVIT
KAVEEERENLEKVHAEEREMWKTEHARDQERVAEAIQAAVQEQQRMSQEAVKAAIAEEQRRSEK
AMEEAVKRTRDELVEYVREQRRLDQVTRQRSLSSLELFLSCAQKQLSALIATEPVDIE

hide sequence

RefSeq Acc Id:	XP_006237747 ⟸ XM_006237685
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AS44 (UniProtKB/TrEMBL), A0A8I6G845 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDDDDFGGFEAAETFDGEQGGNQAVSPAVPWATFPAVSGVRLSPASPELILDHDRSSPSSGHLR SDAVISSPDDTRADSSLVNQTISKVQLQQSAHTHLNIPLFPLGLTDESNHGALALEDEPEGPGV HVSNSQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKDFLKEKEQDAVSFQARYREL QALLQSSVKQQLDAIEKQYVSAIEKQAHRCEELLHAQHQRLLEVLDTEKELLKEKIQEALTQQS QEQKETLGKCLQEEMQKNKETLESAVKLEKEAMKDVITKAVEEERENLEKVHAEEREMWKTEHA RDQERVAEAIQAAVQEQQRMSQEAVKAAIAEEQRRSEKAMEEAVKRTRDELVEYVREQRRLDQV TRQRSLSSLELFLSCAQKQLSALIATEPVDIE hide sequence

RefSeq Acc Id:	XP_006237749 ⟸ XM_006237687
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6G845 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPMWNKVSGVRLSPASPELILDHDRSSPSSGHLRSDAVISSPDDTRADSSLVNQTISKVQLQQS AHTHLNIPLFPLGLTDESNHGALALEDEPEGPGVHVSNSQLRQKISSLETKLKASEEEKQRIKK DVESLMEKHSVLEKDFLKEKEQDAVSFQARYRELQALLQSSVKQQLDAIEKQYVSAIEKQAHRC EELLHAQHQRLLEVLDTEKELLKEKIQEALTQQSQEQKETLGKCLQEEMQKNKETLESAVKLEK EAMKDVITKAVEEERENLEKVHAEEREMWKTEHARDQERVAEAIQAAVQEQQRMSQEAVKAAIA EEQRRSEKAMEEAVKRTRDELVEYVREQRRLDQVTRQRSLSSLELFLSCAQKQLSALIATEPVD IE hide sequence

RefSeq Acc Id:	XP_008761678 ⟸ XM_008763456
- Peptide Label:	isoform X1
- UniProtKB:	Q6AY97 (UniProtKB/Swiss-Prot), A0A8I6G845 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDDDDFGGFEAAETFDGEQGGNQAVSPAVPWATFPAVSGVRLSPASPELILDHDRSSPSSGHLR SDAVISSPDDTRADSSLVNQTISKVQLQQSAHTHLNIPLFPLGLTDESNHGALALEDEPEGPGV HVSNSQLRQKISSLETKLKASEEEKQRIKKDVESLMEKHSVLEKDFLKEKEQDAVSFQARYREL QEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQLDAIEKQYVSAIEKQAHRCEELLHAQH QRLLEVLDTEKELLKEKIQEALTQQSQEQKETLGKCLQEEMQKNKETLESAVKLEKEAMKDVIT KAVEEERENLEKVHAEEREMWKTEHARDQERVAEAIQAAVQEQQRMSQEAVKAAIAEEQRRSEK AMEEAVKRTRDELVEYVREQRRLDQVTRQRSLSSLELFLSCAQKQLSALIATEPVDIE hide sequence

RefSeq Acc Id:	XP_006237748 ⟸ XM_006237686
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6A3R2 (UniProtKB/TrEMBL), A0A8I6G845 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPMWNKVSGVRLSPASPELILDHDRSSPSSGHLRSDAVISSPDDTRADSSLVNQTISKVQLQQS AHTHLNIPLFPLGLTDESNHGALALEDEPEGPGVHVSNSQLRQKISSLETKLKASEEEKQRIKK DVESLMEKHSVLEKDFLKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALSIIVDEYKALL QSSVKQQLDAIEKQYVSAIEKQAHRCEELLHAQHQRLLEVLDTEKELLKEKIQEALTQQSQEQK ETLGKCLQEEMQKNKETLESAVKLEKEAMKDVITKAVEEERENLEKVHAEEREMWKTEHARDQE RVAEAIQAAVQEQQRMSQEAVKAAIAEEQRRSEKAMEEAVKRTRDELVEYVREQRRLDQVTRQR SLSSLELFLSCAQKQLSALIATEPVDIE hide sequence

Ensembl Acc Id:

ENSRNOP00000002527 ⟸ ENSRNOT00000002527

RefSeq Acc Id:	XP_038963649 ⟸ XM_039107721
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6G845 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000081556 ⟸ ENSRNOT00000108480

Ensembl Acc Id:

ENSRNOP00000097935 ⟸ ENSRNOT00000099526

Ensembl Acc Id:

ENSRNOP00000087761 ⟸ ENSRNOT00000119701

RefSeq Acc Id:	XP_063142264 ⟸ XM_063286194
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6G845 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142262 ⟸ XM_063286192
- Peptide Label:	isoform X1
- UniProtKB:	Q6AY97 (UniProtKB/Swiss-Prot), A0A8I6G845 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142260 ⟸ XM_063286190
- Peptide Label:	isoform X1
- UniProtKB:	Q6AY97 (UniProtKB/Swiss-Prot), A0A8I6G845 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142263 ⟸ XM_063286193
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6G845 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6AY97-F1-model_v2	AlphaFold	Q6AY97	1-442	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693512

Promoter ID:

EPDNEW_R4037

Type:

multiple initiation site

Name:

Ccdc91_1

Description:

coiled-coil domain containing 91

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	4	181,874,841 - 181,874,901	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1359502	AgrOrtholog
BioCyc Gene	G2FUF-42412	BioCyc
Ensembl Genes	ENSRNOG00000001847	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000002527	ENTREZGENE
	ENSRNOT00000002527.7	UniProtKB/Swiss-Prot
	ENSRNOT00000099526	ENTREZGENE
	ENSRNOT00000108480	ENTREZGENE
IMAGE_CLONE	IMAGE:7127603	IMAGE-MGC_LOAD
InterPro	CCDC91	UniProtKB/Swiss-Prot
KEGG Report	rno:312863	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:94147	IMAGE-MGC_LOAD
NCBI Gene	312863	ENTREZGENE
PANTHER	COILED-COIL DOMAIN-CONTAINING PROTEIN 91	UniProtKB/Swiss-Prot
	PTHR35072	UniProtKB/Swiss-Prot
PhenoGen	Ccdc91	PhenoGen
RatGTEx	ENSRNOG00000001847	RatGTEx
UniProt	A0A8I6A3R2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AS44	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6G845	ENTREZGENE, UniProtKB/TrEMBL
	CCD91_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Ccdc91	coiled-coil domain containing 91	LOC108348191	coiled-coil domain-containing protein 91-like	Data merged from RGD:11517805	737654	PROVISIONAL
2016-08-02	LOC108348191	coiled-coil domain-containing protein 91-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2015-07-29	Ccdc91	coiled-coil domain containing 91	LOC100911099	coiled-coil domain-containing protein 91-like	Data merged from RGD:6495027	737654	PROVISIONAL
2012-07-05	LOC100911099	coiled-coil domain-containing protein 91-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-03-05	Ccdc91	coiled-coil domain containing 91	LOC312863	similar to RIKEN cDNA 1810060J02	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-07-29	LOC312863	similar to RIKEN cDNA 1810060J02			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD