Mospd1 (motile sperm domain containing 1) - Rat Genome Database

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Gene: Mospd1 (motile sperm domain containing 1) Rattus norvegicus
Analyze
Symbol: Mospd1 (Ensembl: Mospd1l1)
Name: motile sperm domain containing 1 (Ensembl:motile sperm domain containing 1 like 1)
RGD ID: 1359486
Description: Predicted to be involved in negative regulation of transcription by RNA polymerase II and positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleus and perinuclear region of cytoplasm. Predicted to be active in cytoplasm. Orthologous to human MOSPD1 (motile sperm domain containing 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC317312; motile sperm domain-containing protein 1; similar to RIKEN cDNA 1810018L05
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X138,019,719 - 138,047,475 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1486,500,797 - 86,503,187 (-)EnsemblGRCr8
GRCr8 EnsemblX138,020,115 - 138,047,603 (-)EnsemblGRCr8
mRatBN7.2X133,100,200 - 133,127,960 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl169,801,058 - 69,801,794 (-)EnsemblmRatBN7.2
mRatBN7.2 Ensembl1482,286,939 - 82,289,374 (-)EnsemblmRatBN7.2
mRatBN7.2 EnsemblX133,100,422 - 133,127,908 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_UtxX135,260,246 - 135,287,904 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X138,843,103 - 138,870,761 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X136,408,792 - 136,436,446 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X157,745,939 - 157,774,505 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX157,759,624 - 157,773,108 (+)Ensemblrn6Rnor6.0
Rnor_5.0X152,368,617 - 152,397,192 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4X140,301,920 - 140,329,537 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
RGSC_v3.1X140,375,356 - 140,402,970 (-)NCBI
Cytogenetic MapXq36NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
1,2-dimethylhydrazine  (ISO)
1-nitropyrene  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2-hydroxypropanoic acid  (ISO)
3-chloropropane-1,2-diol  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
acrylamide  (EXP,ISO)
aflatoxin B1  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
butanal  (ISO)
Butylbenzyl phthalate  (EXP)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
cylindrospermopsin  (ISO)
dexamethasone  (ISO)
diethylstilbestrol  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
ethyl methanesulfonate  (ISO)
finasteride  (EXP)
folic acid  (ISO)
formaldehyde  (ISO)
indole-3-methanol  (EXP)
indometacin  (ISO)
isotretinoin  (ISO)
lead diacetate  (EXP)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
Mesaconitine  (EXP)
methyl methanesulfonate  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
rac-lactic acid  (ISO)
rimonabant  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (ISO)
titanium dioxide  (ISO)
trichloroethene  (EXP)
triptonide  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:15489334   PMID:21792907  


Genomics

Comparative Map Data
Mospd1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X138,019,719 - 138,047,475 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1486,500,797 - 86,503,187 (-)EnsemblGRCr8
GRCr8 EnsemblX138,020,115 - 138,047,603 (-)EnsemblGRCr8
mRatBN7.2X133,100,200 - 133,127,960 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl169,801,058 - 69,801,794 (-)EnsemblmRatBN7.2
mRatBN7.2 Ensembl1482,286,939 - 82,289,374 (-)EnsemblmRatBN7.2
mRatBN7.2 EnsemblX133,100,422 - 133,127,908 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_UtxX135,260,246 - 135,287,904 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X138,843,103 - 138,870,761 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X136,408,792 - 136,436,446 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X157,745,939 - 157,774,505 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX157,759,624 - 157,773,108 (+)Ensemblrn6Rnor6.0
Rnor_5.0X152,368,617 - 152,397,192 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4X140,301,920 - 140,329,537 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
RGSC_v3.1X140,375,356 - 140,402,970 (-)NCBI
Cytogenetic MapXq36NCBI
MOSPD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X134,887,632 - 134,915,257 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX134,887,613 - 134,915,470 (-)Ensemblhg38GRCh38
GRCh37X134,021,662 - 134,049,287 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X133,849,328 - 133,876,963 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34X133,747,181 - 133,774,817NCBI
CeleraX134,408,422 - 134,436,071 (-)NCBICelera
Cytogenetic MapXq26.3NCBI
HuRefX123,419,072 - 123,446,778 (-)NCBIHuRef
CHM1_1X133,933,037 - 133,960,671 (-)NCBICHM1_1
T2T-CHM13v2.0X133,212,706 - 133,240,365 (-)NCBIT2T-CHM13v2.0
Mospd1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X52,433,471 - 52,459,567 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX52,433,475 - 52,459,379 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38X53,344,594 - 53,370,658 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX53,344,598 - 53,370,502 (-)Ensemblmm10GRCm38
MGSCv37X50,698,198 - 50,723,669 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36X49,589,648 - 49,615,119 (-)NCBIMGSCv36mm8
CeleraX40,774,568 - 40,800,077 (-)NCBICelera
Cytogenetic MapXA5NCBI
cM MapX29.51NCBI
Mospd1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955473103,356 - 129,274 (+)Ensembl
ChiLan1.0NW_004955473103,541 - 127,854 (+)NCBIChiLan1.0ChiLan1.0
MOSPD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X134,327,149 - 134,357,701 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X134,330,747 - 134,361,317 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X124,038,397 - 124,066,128 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X134,333,858 - 134,361,628 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX134,333,858 - 134,361,628 (-)EnsemblpanPan2panpan1.1
MOSPD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X105,508,711 - 105,532,737 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX105,510,077 - 105,532,636 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_TashaX91,619,407 - 91,643,426 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0X107,371,271 - 107,395,295 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX107,371,125 - 107,395,235 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X104,782,002 - 104,806,025 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X106,641,834 - 106,665,849 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X106,439,601 - 106,463,625 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Mospd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X103,658,975 - 103,683,905 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936691273,454 - 298,533 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936691273,490 - 297,290 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MOSPD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX110,693,552 - 110,720,762 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1X110,693,538 - 110,786,323 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X126,558,503 - 126,650,869 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MOSPD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_02366606716,795,346 - 16,797,873 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mospd1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479714,583,820 - 14,597,139 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462479714,582,334 - 14,606,936 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Mospd1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1X115,879,492 - 115,907,236 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Mospd1
97 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:377
Count of miRNA genes:236
Interacting mature miRNAs:278
Transcripts:ENSRNOT00000003192
Prediction methods:Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X97528096142528096Rat
1598856Memor1Memory QTL 11.9exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)X120028026141353710Rat
1598809Memor15Memory QTL 154.4exploratory behavior trait (VT:0010471)difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X120028026141353710Rat
738025Stresp3Stress response QTL 34.610.0066stress-related behavior trait (VT:0010451)defensive burying - approachX105359969157758123Rat
10059603Bw174Body weight QTL 1743.40.025body mass (VT:0001259)body weight (CMO:0000012)X118973754157758123Rat
2302047Pia34Pristane induced arthritis QTL 345.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)1996916163141916163Rat

Markers in Region
RH140544  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21205,727,649 - 205,727,898 (+)MAPPERmRatBN7.2
mRatBN7.2X133,119,618 - 133,119,867 (-)MAPPERmRatBN7.2
Rnor_6.0X157,754,025 - 157,754,273NCBIRnor6.0
Rnor_6.01225,029,738 - 225,029,986NCBIRnor6.0
Rnor_5.01231,967,908 - 231,968,156UniSTSRnor5.0
Rnor_5.0X152,376,696 - 152,376,944UniSTSRnor5.0
RGSC_v3.41211,503,457 - 211,503,705UniSTSRGSC3.4
RGSC_v3.4X140,321,319 - 140,321,567UniSTSRGSC3.4
Celera1203,240,522 - 203,240,770UniSTS
RH 3.4 Map11509.9UniSTS
Cytogenetic MapXq36UniSTS
Cytogenetic Map1q43UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
13 23 104 216 114 120 82 103 82 456 239 11 199 106 112 38 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001014107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001434093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001434094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001434095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006257633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006257634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017602055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063280036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063280037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063280038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063280039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063280040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063280041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC086521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000003192   ⟹   ENSRNOP00000003192
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 EnsemblX138,020,115 - 138,047,603 (-)Ensembl
mRatBN7.2 EnsemblX133,100,696 - 133,127,908 (-)Ensembl
Rnor_6.0 EnsemblX157,759,624 - 157,773,108 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000101626   ⟹   ENSRNOP00000089132
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl169,801,058 - 69,801,794 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000102965   ⟹   ENSRNOP00000076964
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 EnsemblX138,020,115 - 138,047,475 (-)Ensembl
mRatBN7.2 EnsemblX133,100,422 - 133,127,908 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000161890   ⟹   ENSRNOP00000112498
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 EnsemblX138,022,811 - 138,044,175 (-)Ensembl
RefSeq Acc Id: NM_001014107   ⟹   NP_001014129
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X138,019,719 - 138,047,373 (-)NCBI
mRatBN7.2X133,100,200 - 133,127,856 (-)NCBI
Rnor_6.0X157,746,034 - 157,774,505 (+)NCBI
Rnor_5.0X152,368,617 - 152,397,192 (+)NCBI
RGSC_v3.4X140,301,920 - 140,329,537 (-)RGD
Sequence:
RefSeq Acc Id: XM_006257633   ⟹   XP_006257695
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X138,019,722 - 138,047,475 (-)NCBI
mRatBN7.2X133,100,200 - 133,127,960 (-)NCBI
Rnor_6.0X157,745,940 - 157,774,505 (+)NCBI
Rnor_5.0X152,368,617 - 152,397,192 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006257634   ⟹   XP_006257696
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X138,019,722 - 138,047,475 (-)NCBI
mRatBN7.2X133,100,200 - 133,127,960 (-)NCBI
Rnor_6.0X157,745,939 - 157,774,505 (+)NCBI
Rnor_5.0X152,368,617 - 152,397,192 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017602055   ⟹   XP_017457544
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X138,019,722 - 138,047,475 (-)NCBI
mRatBN7.2X133,100,200 - 133,127,960 (-)NCBI
Rnor_6.0X157,745,939 - 157,774,505 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063280036   ⟹   XP_063136106
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X138,019,722 - 138,047,475 (-)NCBI
RefSeq Acc Id: XM_063280037   ⟹   XP_063136107
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X138,019,722 - 138,047,417 (-)NCBI
RefSeq Acc Id: XM_063280038   ⟹   XP_063136108
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X138,019,722 - 138,047,371 (-)NCBI
RefSeq Acc Id: XM_063280039   ⟹   XP_063136109
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X138,019,722 - 138,047,420 (-)NCBI
RefSeq Acc Id: XM_063280040   ⟹   XP_063136110
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X138,019,722 - 138,047,452 (-)NCBI
RefSeq Acc Id: XM_063280041   ⟹   XP_063136111
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X138,019,722 - 138,047,452 (-)NCBI
RefSeq Acc Id: NP_001014129   ⟸   NM_001014107
- UniProtKB: Q5RJS6 (UniProtKB/Swiss-Prot),   A6KUJ2 (UniProtKB/TrEMBL),   A0A8L2Q064 (UniProtKB/TrEMBL),   A0A8L2R7H2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006257695   ⟸   XM_006257633
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006257696   ⟸   XM_006257634
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_017457544   ⟸   XM_017602055
- Peptide Label: isoform X4
- Sequence:
Ensembl Acc Id: ENSRNOP00000003192   ⟸   ENSRNOT00000003192
Ensembl Acc Id: ENSRNOP00000089132   ⟸   ENSRNOT00000101626
Ensembl Acc Id: ENSRNOP00000076964   ⟸   ENSRNOT00000102965
RefSeq Acc Id: XP_063136106   ⟸   XM_063280036
- Peptide Label: isoform X1
- UniProtKB: A0A8L2R7H2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063136111   ⟸   XM_063280041
- Peptide Label: isoform X4
- UniProtKB: A0A8I6AC24 (UniProtKB/TrEMBL),   A0A8I5Y568 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063136110   ⟸   XM_063280040
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063136109   ⟸   XM_063280039
- Peptide Label: isoform X2
- UniProtKB: Q5RJS6 (UniProtKB/Swiss-Prot),   A0A8L2Q064 (UniProtKB/TrEMBL),   A0A8L2R7H2 (UniProtKB/TrEMBL),   A6KUJ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063136107   ⟸   XM_063280037
- Peptide Label: isoform X2
- UniProtKB: Q5RJS6 (UniProtKB/Swiss-Prot),   A0A8L2Q064 (UniProtKB/TrEMBL),   A0A8L2R7H2 (UniProtKB/TrEMBL),   A6KUJ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063136108   ⟸   XM_063280038
- Peptide Label: isoform X2
- UniProtKB: Q5RJS6 (UniProtKB/Swiss-Prot),   A0A8L2Q064 (UniProtKB/TrEMBL),   A0A8L2R7H2 (UniProtKB/TrEMBL),   A6KUJ2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000112498   ⟸   ENSRNOT00000161890
Protein Domains
MSP

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5RJS6-F1-model_v2 AlphaFold Q5RJS6 1-213 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1359486 AgrOrtholog
BioCyc Gene G2FUF-976 BioCyc
Ensembl Genes ENSRNOG00000002332 Ensembl
  ENSRNOG00000058316 Ensembl
  ENSRNOG00000066239 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000003192 ENTREZGENE
  ENSRNOT00000102965 ENTREZGENE
  ENSRNOT00000161890 ENTREZGENE
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7302680 IMAGE-MGC_LOAD
InterPro Ig-like_fold UniProtKB/Swiss-Prot
  MOSPD1 UniProtKB/Swiss-Prot
  MSP_dom UniProtKB/Swiss-Prot
  PapD-like_sf UniProtKB/Swiss-Prot
KEGG Report rno:317312 UniProtKB/Swiss-Prot
MGC_CLONE MGC:105971 IMAGE-MGC_LOAD
NCBI Gene 317312 ENTREZGENE
PANTHER MOTILE SPERM DOMAIN-CONTAINING PROTEIN 1 UniProtKB/Swiss-Prot
  PTHR34441 UniProtKB/Swiss-Prot
Pfam Motile_Sperm UniProtKB/Swiss-Prot
PhenoGen Mospd1 PhenoGen
PROSITE MSP UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000002332 RatGTEx
  ENSRNOG00000058316 RatGTEx
  ENSRNOG00000066239 RatGTEx
Superfamily-SCOP SSF49354 UniProtKB/Swiss-Prot
UniProt A0A8I5Y568 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AC24 ENTREZGENE
  A0A8L2Q064 ENTREZGENE
  A0A8L2R7H2 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0M2P3_RAT UniProtKB/TrEMBL
  A6KUJ2 ENTREZGENE, UniProtKB/TrEMBL
  MSPD1_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-05 Mospd1  motile sperm domain containing 1  LOC317312  similar to RIKEN cDNA 1810018L05  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-07-29 LOC317312  similar to RIKEN cDNA 1810018L05      Symbol and Name status set to provisional 70820 PROVISIONAL