Mib2 (MIB E3 ubiquitin protein ligase 2)

Gene: Mib2 (MIB E3 ubiquitin protein ligase 2) Rattus norvegicus

Analyze

Symbol:

Mib2

Name:

MIB E3 ubiquitin protein ligase 2

RGD ID:

1359469

Description:

Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in positive regulation of canonical NF-kappaB signal transduction and protein ubiquitination. Predicted to be located in early endosome and plasma membrane. Predicted to be part of ubiquitin ligase complex. Predicted to be active in cytoplasm. Orthologous to human MIB2 (MIB E3 ubiquitin protein ligase 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; amitrole.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

dystrophin-like; E3 ubiquitin-protein ligase MIB2; LOC474147; mind bomb homolog 2; mindbomb E3 ubiquitin protein ligase 2; RBSC-skeletrophin; RBSC-skeletrophin/dystrophin-like polypeptide; RING-type E3 ubiquitin transferase MIB2

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MIB2 (MIB E3 ubiquitin protein ligase 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Mib2 (mindbomb E3 ubiquitin protein ligase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Mib2 (MIB E3 ubiquitin protein ligase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MIB2 (MIB E3 ubiquitin protein ligase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MIB2 (MIB E3 ubiquitin protein ligase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Mib2 (MIB E3 ubiquitin protein ligase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MIB2 (MIB E3 ubiquitin protein ligase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MIB2 (MIB E3 ubiquitin protein ligase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Mib2 (MIB E3 ubiquitin protein ligase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	MIB2 (MIB E3 ubiquitin protein ligase 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Mib2 (mindbomb E3 ubiquitin protein ligase 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	mib2 (mindbomb E3 ubiquitin protein ligase 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	mib-1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|PhylomeDB)
Drosophila melanogaster (fruit fly):	mib2	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	mib2	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	171,526,037 - 171,542,479 (-)	NCBI		GRCr8
mRatBN7.2	5	166,243,776 - 166,259,944 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	166,243,776 - 166,259,650 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	168,948,781 - 168,964,652 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	170,770,200 - 170,786,071 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	170,732,739 - 170,748,610 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	173,082,943 - 173,099,353 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	173,082,943 - 173,098,816 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	176,558,657 - 176,574,530 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	172,490,963 - 172,497,379 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	172,507,501 - 172,515,596 (-)	NCBI
Celera	5	164,444,700 - 164,460,443 (-)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

chromosome 1p36 deletion syndrome (ISO)

congenital myasthenic syndrome 8 (ISO)

COVID-19 (ISO)

dilated cardiomyopathy 1LL (ISO)

Ehlers-Danlos syndrome spondylodysplastic type 2 (ISO)

genetic disease (ISO)

Goldberg-Shprintzen syndrome (ISO)

idiopathic generalized epilepsy (ISO)

immunodeficiency 16 (ISO)

immunodeficiency 38 (ISO)

Joubert syndrome 25 (ISO)

Neurodevelopmental Disorders (ISO)

Peroxisome Biogenesis Disorder, Complementation Group 7 (ISO)

Shprintzen-Goldberg Craniosynostosis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acrolein (ISO)

aflatoxin B1 (ISO)

alpha-pinene (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

butan-1-ol (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

choline (ISO)

chromium(6+) (ISO)

cisplatin (ISO)

clofibrate (ISO)

decabromodiphenyl ether (EXP)

diquat (ISO)

diuron (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (EXP)

enzalutamide (ISO)

ethanol (ISO)

ethyl methanesulfonate (ISO)

fenthion (ISO)

folic acid (ISO)

formaldehyde (ISO)

FR900359 (ISO)

L-methionine (ISO)

lead(0) (ISO)

methidathion (ISO)

methimazole (EXP)

methyl methanesulfonate (ISO)

N-methyl-4-phenylpyridinium (EXP)

ozone (ISO)

paracetamol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

pirinixic acid (ISO)

pregnenolone 16alpha-carbonitrile (EXP)

quercetin (ISO)

SB 431542 (ISO)

senecionine (ISO)

sulfadimethoxine (EXP)

sunitinib (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triptonide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

Notch signaling pathway (IEA)

positive regulation of canonical NF-kappaB signal transduction (ISO)

protein ubiquitination (IEA,ISO)

Cellular Component

cytoplasm (IEA)

early endosome (IEA,ISO)

plasma membrane (IEA,ISO)

ubiquitin ligase complex (IEA,ISO)

Molecular Function

actin binding (IEA)

protein binding (ISO)

ubiquitin protein ligase activity (IBA,IEA,ISO)

ubiquitin-protein transferase activity (IEA,ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12761501	PMID:15057822	PMID:15824097	PMID:19028597	PMID:27573246

Genomics

Comparative Map Data

Mib2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	171,526,037 - 171,542,479 (-)	NCBI		GRCr8
mRatBN7.2	5	166,243,776 - 166,259,944 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	166,243,776 - 166,259,650 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	168,948,781 - 168,964,652 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	170,770,200 - 170,786,071 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	170,732,739 - 170,748,610 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	173,082,943 - 173,099,353 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	173,082,943 - 173,098,816 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	176,558,657 - 176,574,530 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	172,490,963 - 172,497,379 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	172,507,501 - 172,515,596 (-)	NCBI
Celera	5	164,444,700 - 164,460,443 (-)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

MIB2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	1,613,731 - 1,630,605 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	1,615,454 - 1,630,605 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	1,550,880 - 1,565,985 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	1,540,747 - 1,555,848 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	1,016,532 - 1,030,942 (-)	NCBI		Celera
Cytogenetic Map	1	p36.33	NCBI
HuRef	1	824,580 - 841,846 (+)	NCBI		HuRef
CHM1_1	1	1,537,413 - 1,553,030 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	1,048,236 - 1,065,110 (+)	NCBI		T2T-CHM13v2.0

Mib2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	155,738,925 - 155,753,711 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	155,739,134 - 155,753,655 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	155,654,468 - 155,669,254 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	155,654,677 - 155,669,198 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	155,028,579 - 155,043,336 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	154,498,482 - 154,512,614 (-)	NCBI		MGSCv36	mm8
Celera	4	157,929,347 - 157,944,090 (-)	NCBI		Celera
Cytogenetic Map	4	E2	NCBI
cM Map	4	86.86	NCBI

Mib2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955486	9,271,099 - 9,285,682 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955486	9,273,580 - 9,285,682 (-)	NCBI	ChiLan1.0	ChiLan1.0

MIB2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	226,586,500 - 226,604,001 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	225,242,442 - 225,261,089 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	379,326 - 395,041 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	1,539,640 - 1,552,913 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	1,539,634 - 1,557,517 (+)	Ensembl	panpan1.1		panPan2

MIB2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	56,680,526 - 56,693,551 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	56,581,550 - 56,693,544 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	56,756,140 - 56,769,077 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	56,882,471 - 56,895,406 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	56,882,507 - 56,895,503 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	56,873,293 - 56,886,228 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	56,765,635 - 56,778,536 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	57,155,552 - 57,168,487 (+)	NCBI		UU_Cfam_GSD_1.0

Mib2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	27,819,341 - 27,832,454 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936737	1,633,495 - 1,646,598 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MIB2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	63,787,201 - 63,800,423 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	63,787,200 - 63,800,425 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	58,216,225 - 58,229,985 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MIB2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	129,878,014 - 129,893,239 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	129,877,142 - 129,884,894 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666054	34,333,028 - 34,349,732 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mib2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624818	8,077,851 - 8,099,547 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624818	8,078,677 - 8,091,448 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Mib2
30 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	49
Count of miRNA genes:	43
Interacting mature miRNAs:	48
Transcripts:	ENSRNOT00000023696
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	2138965	166875058	Rat
1302790	Scl20	Serum cholesterol level QTL 20	6.4	0.0001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	82394392	166664054	Rat
1641920	Colcs1	Colorectal carcinoma susceptibility QTL 1	2.99	0.0055	intestine integrity trait (VT:0010554)	benign colorectal tumor surface area measurement (CMO:0001799)	5	121846814	166846814	Rat
10053720	Scort26	Serum corticosterone level QTL 26	2.06	0.0147	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	124965598	166875058	Rat
724525	Bp147	Blood pressure QTL 147	4.3	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	126424772	166875058	Rat
1598819	Bp292	Blood pressure QTL 292	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	127798274	166875058	Rat
1598861	Cm64	Cardiac mass QTL 64	2.9		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	127798274	166875058	Rat
8552908	Pigfal4	Plasma insulin-like growth factor 1 level QTL 4	6.6		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	128506074	166875058	Rat
8694169	Bw148	Body weight QTL 148	5	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	128506074	166875058	Rat
634349	Bp139	Blood pressure QTL 139		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	128924607	166875058	Rat
738018	Anxrr4	Anxiety related response QTL 4	5.1		exploratory behavior trait (VT:0010471)	percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)	5	130130159	166875058	Rat
7794791	Mcs33	Mammary carcinoma susceptibility QTL 33	1.93		mammary gland integrity trait (VT:0010552)	mammary tumor incidence/prevalence measurement (CMO:0000946)	5	131345754	166875058	Rat
631562	Apr2	Acute phase response QTL 2	3.7		blood murinoglobulin 1 amount (VT:0010597)	plasma murinoglobulin 1 level (CMO:0001931)	5	135927956	166875058	Rat
61444	Strs2	Sensitivity to stroke QTL 2	4.7		cerebrum integrity trait (VT:0010549)	post-insult time to onset of cerebrovascular lesion (CMO:0002343)	5	135929696	166875058	Rat
1331721	Bp210	Blood pressure QTL 210	3.413		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	5	143069996	166846814	Rat
631272	Lanf1	Left ventricular atrial natriuretic factor QTL 1	12		heart left ventricle natriuretic peptide A amount (VT:0010596)	heart left ventricle natriuretic peptide A level (CMO:0002165)	5	151113452	166875058	Rat
1549904	Neuinf1	Neuroinflammation QTL 1	3	0	nervous system integrity trait (VT:0010566)	blood T lymphocyte count (CMO:0000110)	5	154828214	166875058	Rat

Markers in Region

RH141852

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	166,244,449 - 166,244,726 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	173,083,617 - 173,083,893	NCBI	Rnor6.0
Rnor_5.0	5	176,559,331 - 176,559,607	UniSTS	Rnor5.0
RGSC_v3.4	5	172,491,636 - 172,491,912	UniSTS	RGSC3.4
Celera	5	164,445,374 - 164,445,650	UniSTS
RH 3.4 Map	5	1144.9	UniSTS
Cytogenetic Map	5	q36	UniSTS

Mib2

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	166,248,695 - 166,250,175 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	173,087,863 - 173,089,342	NCBI	Rnor6.0
Rnor_5.0	5	176,563,577 - 176,565,056	UniSTS	Rnor5.0
RGSC_v3.4	5	172,495,872 - 172,497,351	UniSTS	RGSC3.4
Celera	5	164,449,578 - 164,451,057	UniSTS
Cytogenetic Map	5	q36	UniSTS

Mib2

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	166,243,997 - 166,244,730 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	173,083,165 - 173,083,897	NCBI	Rnor6.0
Rnor_5.0	5	176,558,879 - 176,559,611	UniSTS	Rnor5.0
RGSC_v3.4	5	172,491,184 - 172,491,916	UniSTS	RGSC3.4
Celera	5	164,444,922 - 164,445,654	UniSTS
Cytogenetic Map	5	q36	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium		35	14	3	5	3		2	74	29	41	11
Low	3	8	43	38	14	38	8	9		6			8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001005901	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006239594	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593552	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593553	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593555	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593558	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288160	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288161	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288162	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288163	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288165	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288166	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC105662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000023696 ⟹ ENSRNOP00000023696

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	166,243,776 - 166,259,650 (-)	Ensembl
Rnor_6.0 Ensembl	5	173,082,943 - 173,098,816 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000100849 ⟹ ENSRNOP00000082241

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	166,243,776 - 166,259,650 (-)	Ensembl

RefSeq Acc Id:

NM_001005901 ⟹ NP_001005901

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	171,526,037 - 171,541,910 (-)	NCBI
mRatBN7.2	5	166,243,776 - 166,259,650 (-)	NCBI
Rnor_6.0	5	173,082,943 - 173,098,816 (-)	NCBI
Rnor_5.0	5	176,558,657 - 176,574,530 (-)	NCBI
Celera	5	164,444,700 - 164,460,443 (-)	NCBI

Sequence:

show sequence

GGGAGTTGTCTGCCCCGCCCCCGGGCTGTCTCTGCAAACTACAGCTCCCGGCAGTCTGTGCGGC
GGCCCGCGACCGTGGTCGGGGGGCCGTGGTGGGGCTCCCTGGTGGGCTAGCGCTGGAGAGGCGG
CCTTGCTAAGCACTGTTGGGGGGCGGAGGACGGCGGGCTGCAGCTGGCGCCTCGGTGGCAAGCC
GAGGTTCCACTGTCAGCCTCTGCGCTGCTCAGAGCCGGGTATTCCTGGGCCGAACGAGCGCGGA
AACTCCGGGCAAGTGGGGGGCCGGGCCGGGCGCCCTCCCAGCGCCGGGGGCGGTGGCACGGGGC
CTAGGGGGGCCTGATCATCCTGACGAGGCTGAGGTCTTGTCGGCCGACCTCGGCCCTTCAGCAC
GACCGGCTTTTAGTCCTTCCCCCCCGGACCCAGCTCGTGCCCGTTGCGCGTTCTCGGTGCGTGG
GGGTGATGCAGCGTGTCCCAGCCACCAGACCCATGGGAGCTTTTTAAGGCGACCAGCGGCCTCT
GTCCCTTCTCAGATGTTAACTGCGTCTCAGCACCCCTGGCCATAGGGTTGGATCTCCGGGGGCT
TTCAGAAAGGAAGGTCAGCACGGCGGAGCCCAGTCCCAAGTCTCCAAGCATCAGGGCTTCCTGC
CCGATTCTCAAGGCGGGTGGGGGACACTGGACCTCCAGACAGCCTGGCTCCCTGCCTTCCTGTT
TGGTTTGCTGTATTCTATGTTGGCAATGGCTGCTAGTTTCCCACAGGAAGTTTTGGCCCAGGAA
GCAAATTTGTGGCCCAGGAAGTAGCAACTAAATGCCTGGGATGCTGACTAGAGGCTTCTTTGTG
TTCTAAGGTCTTTGAACAACCCCCCCTCACCATGGACCTGGACCCCCATGCAGGTGTGCAGGTG
GGCATGCGTGTGGTACGCGGAATGGACTGGAAATGGGGCCAGCAGGATGGAGGTGAGGGCGGTG
TGGGCACCGTGGTGGAGCTTGGCCGCCATGGCAGCCCCTCGACCCCCGACCGTACAGTTGTCGT
TCAGTGGGACCAGGGCACACGTACCAACTATCGAGCTGGCTACCAAGGTGCCCATGACCTGTTG
CTCTATGACAACGCCCAAATCGGTATCCGCCATCCCAACATCATCTGTGACTGTTGCAAGAAAC
ATGGGCTTCGTGGCATGCGTTGGAAGTGCCGTGTCTGCTTTGACTATGATCTCTGCACGCAGTG
CTACATGCACAACAAACATGACCTTACCCATGCCTTCGAGCGCTATGAGACATCTCACTCTCGC
CCGGTTACGCTGAGTCCCCGACAGGGCCTCCCTCGAATCCCACTGAGGGGCATCTTTCAAGGAG
CAAAAGTGGTACGAGGCCCTGACTGGGAATGGGGCTCACAAGATGGAGGGGAAGGCAAGACAGG
CCGTGTGGTGGACATCCGTGGCTGGGATGTGGAGACAGGCCGAAGTGTGGCCAGTGTGACATGG
GCAGATGGAACCACAAATGTGTACCGAGTGGGCCACAAAGGCAAGGTGGATCTCAAATGTGTTG
GTGAGGCAGCTGGCGGCTTTTACTACAAGGAGCACCTCCCGAAGCTTGGCAAGCCAGCAGAGCT
ACAGCGCAGGGTGAGTGCTGATGGCCAGCCCTTCCAGCGTGGGGACAAGGTCAAGTGTCTGCTG
GACACAGATGTCCTAAGGGACATGCAAGAAGGCCATGGTGGCTGGAACCCTAGGATGGCAGAGA
TGGGCACCGTGCACCGCATCACAGACCGTGGGGACGTGCGTGTGCAGTTCAACCATGAAACCCG
CTGGACCTTCCACCCTGGGGCTCTCACCAAGCACAACAGCTTCTGGGTAGGTGATGTGGTCCGG
GTCATCGATGACCTTGACACTGTGAAGCGACTGCAAGCTGGACATGGAGAATGGACTGACGACA
TGGCCCCCGCCCTGGGCCGAGTGGGGAAAGTGGTGAAGGTGTTTGGAGATGGAAACTTGCGTGT
GGCGGTTGGTGGCCAGCGGTGGACCTTCAGCCCCGCCTGCCTAGTGGCCTGCCGGCCTGAGGAG
GATGCCAACCTGGGCGTGGCTGAGCGCGCCAGAGAGAACAAAAGCTCACTGAGTGTGGCCCTGG
ACAAGCTTCGGACACAGAAGAGCGACCCAGAGCACCCAGGGAGGCTGGTAGTGGAGGCTGCACT
GGGAAATGTAGCCCGGGCCCTGGACCTGCTTCGAAGGCATCCTGAGCAGGTGGACACCAAGAAC
CAGGGTAGGACTGCCCTGCAGGTGGCTGCTTACCTGGGCCAGGTAGAACTGGTACGGCTGCTGC
TGCAGGCAAGAGCAAGTGTGGACCTGCTGGATGAGGAGGGCAACACTGCCCTTCACTACACAGC
CATGGGGAACCAGCCTGAGGCCACAAGGCTGCTCCTGAGTGCCGGATGTGGGGTGGATGCTCAG
AATGGCACACGCAGCACAGCCCTACACGTGGCTGTACAGAGGGGCTTCCTAGAGGTGGTAAAGA
TCCTGTGTGAACATGGTTGTGATGTCAACTTGCCGGATGCCCATGCAGACACACCCCTGCATTC
TGCCATCTCTGCGGGTGCCGGTGCCAGCAGCATTGTTGAAGTCCTCACCGAGGTGCCTGGCATC
GATGTCACTGCTACCAATAGCCAGGGCTTCACACTGCTGCACCATGCATCCCTCAAGGGCCATG
TGCTAGCAGTTAGAAAGATTCTGGCAAGAGCACGGCAGCTGGTGGATGCCAAGAAGGAGGACGG
CTTTACTGCGCTACATCTGGCAGCTCTTAACAACCACCGTGAGGTGGCCCAGGTCCTAATCCGA
GAGGGCCGCTGCGATGTGAATGTGCGAAACAGGAAGCTTCAATCCCCACTGCATCTGGCTGTGC
AGCAGGCCCACCTGGGGCTCGTACCGCTGCTGGTGGACGCTGGCTGCAATGTCAACACTGAGGA
TGAGGAGGGTGACACAGCCCTGCATGTGGCACTACAGCGTCATCAGCTGCTGCCCCTGGTGGCT
GACAGGGCTGGGGGAGACCCAGGGCCCTTGCAGCTGCTGTCAAGGTTACAGGCCTCAGGCCTCC
CAGGCAGCACAGAGTTGACTGTAGGCGCCGCAGTGGCCTGCTTCCTGGCATTGGAGGGTGCTGA
TGTGAGCTACGCAAACCACCGCGGCCGGAGCCCACTGGACCTGGCCACAGAAGGCCGAGTGCTC
AAGGCCTTGCAGGGCTGTGCCCAGCGCTTCAGGGAGCGACAGGCAGGTGGCGGTGGGGGTGTGC
CCCCGGGCCCCCGGCATGTGCTGAGTACTCCTAACACCGTGACGAACCTGCATGTGTCTGGCAC
AGCAGGGCCAGAAGCTGCCGAGTGCCTGGTGTGCTCGGAGCTGGCATTGCTAGTTCTGTTCTCA
CCGTGTCAGCACCGCACAGTGTGTGAGGAGTGCGCACGAAGGATGAAGAAGTGTATCAGGTGCC
AGGTGATCATCAGCAAGAAGCTTCGCCCAGATGGTTCAGAGGTGGTTAATGCCATCCAGGTGCC
CGGCCCGCCTCGGCAACTGGTAGAGGAGCTACAGAGTCGCTACAGGCAGATGGAGGAGCGCATC
ACCTGCCCCATCTGCATCGACAGCCACATCCGCCTGGTGTTCCAGTGCGGCCATGGAGCATGTG
CGCCCTGTGGCGCTGCCCTTAACGCCTGCCCCATTTGCCGCCAGCCCATCCGTGACCGCATTCA
GATCTTCGTGTGAGCGCACTACACACGCTGTGGCTGAGCCCAGGCTCTCCTTCAAAACTCCTGT
ATTTTATAAAAAGATTATCGGAC

hide sequence

RefSeq Acc Id:

XM_006239594 ⟹ XP_006239656

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	171,526,038 - 171,541,823 (-)	NCBI
mRatBN7.2	5	166,243,776 - 166,259,885 (-)	NCBI
Rnor_6.0	5	173,082,944 - 173,099,353 (-)	NCBI
Rnor_5.0	5	176,558,657 - 176,574,530 (-)	NCBI

Sequence:

show sequence

GGAGGCAAAGGCTGTTGGGGCTCCATGGGTTCGAGGTCATGGCTCGAGGTCAACAAACTGAGGT
CCAGGTTATGTTGCTACATGTTGCTACATTTTGCTACATAGTGAAACCTTATTTCAAAAAGAAG
GGGGGAAAAAAGCCAAAAGAATTACTTTGGATGCGTTTTCGCTACATCTCTGGAAACCCCACCC
GTTTCAGGCAAGACGTCACCCGAAGCTTCTGTCTCCAAGGCAACAGAGAGCGTCCTGGGAACTT
GTACTGCGCAGGAGACACGTGCCGCTCTGGCTCCGCCCAGACGCACTTCCGGGCGCGACTTTGC
CCGCATCACCTCTCAACGCTCACTTTCTGTTCCAAGGATGCCAGGACGCAGGTATTTCCAGTTT
CTTCTTTAGAGTAGCAGAGCTCCCGCTGGCCATACCGCGGCTGTCGGTCAGTTTGCTGCCAGAC
CAGACAAATGTTAACTGCGTCTCAGCACCCCTGGCCATAGGGTTGGATCTCCGGGGGCTTTCAG
AAAGGAAGGTCAGCACGGCGGAGCCCAGTCCCAAGTCTCCAAGCATCAGGGCTTCCTGCCCGAT
TCTCAAGGCGGGTGGGGGACACTGGACCTCCAGACAGCCTGGCTCCCTGCCTTCCTGTTTGGTT
TGCTGTATTCTATGTTGGCAATGGCTGCTAGTTTCCCACAGGAAGTTTTGGCCCAGGAAGCAAA
TTTGTGGCCCAGGAAGTAGCAACTAAATGCCTGGGATGCTGACTAGAGGCTTCTTTGTGTTCTA
AGGTCTTTGAACAACCCCCCCTCACCATGGACCTGGACCCCCATGCAGGTGTGCAGGTATCCGC
CATCCCAACATCATCTGTGACTGTTGCAAGAAACATGGGCTTCGTGGCATGCGTTGGAAGTGCC
GTGTCTGCTTTGACTATGATCTCTGCACGCAGTGCTACATGCACAACAAACATGACCTTACCCA
TGCCTTCGAGCGCTATGAGACATCTCACTCTCGCCCGGTTACGCTGAGTCCCCGACAGGGCCTC
CCTCGAATCCCACTGAGGGGCATCTTTCAAGGAGCAAAAGTGGTACGAGGCCCTGACTGGGAAT
GGGGCTCACAAGATGGAGGGGAAGGCAAGACAGGCCGTGTGGTGGACATCCGTGGCTGGGATGT
GGAGACAGGCCGAAGTGTGGCCAGTGTGACATGGGCAGATGGAACCACAAATGTGTACCGAGTG
GGCCACAAAGGCAAGGTGGATCTCAAATGTGTTGGTGAGGCAGCTGGCGGCTTTTACTACAAGG
AGCACCTCCCGAAGCTTGGCAAGCCAGCAGAGCTACAGCGCAGGGTGAGTGCTGATGGCCAGCC
CTTCCAGCGTGGGGACAAGGTCAAGTGTCTGCTGGACACAGATGTCCTAAGGGACATGCAAGAA
GGCCATGGTGGCTGGAACCCTAGGATGGCAGAGTTTATCGGACAGATGGGCACCGTGCACCGCA
TCACAGACCGTGGGGACGTGCGTGTGCAGTTCAACCATGAAACCCGCTGGACCTTCCACCCTGG
GGCTCTCACCAAGCACAACAGCTTCTGGGTAGGTGATGTGGTCCGGGTCATCGATGACCTTGAC
ACTGTGAAGCGACTGCAAGCTGGACATGGAGAATGGACTGACGACATGGCCCCCGCCCTGGGCC
GAGTGGGGAAAGTGGTGAAGGTGTTTGGAGATGGAAACTTGCGTGTGGCGGTTGGTGGCCAGCG
GTGGACCTTCAGCCCCGCCTGCCTAGTGGCCTGCCGGCCTGAGGAGGATGCCAACCTGGGCGTG
GCTGAGCGCGCCAGAGAGAACAAAAGTGCGGCATCCGTCCCAGTGGCTGGTGGGAGGCAGGGCC
GCCCCTGGCCAGCACTTACCCCAACCCTGCCCCCAGGCTCACTGAGTGTGGCCCTGGACAAGCT
TCGGACACAGAAGAGCGACCCAGAGCACCCAGGGAGGCTGGTAGTGGAGGCTGCACTGGGAAAT
GTAGCCCGGGCCCTGGACCTGCTTCGAAGGCATCCTGAGCAGGTGGACACCAAGAACCAGGGTA
GGACTGCCCTGCAGGTGGCTGCTTACCTGGGCCAGGTAGAACTGGTACGGCTGCTGCTGCAGGC
AAGAGCAAGTGTGGACCTGCTGGATGAGGAGGGCAACACTGCCCTTCACTACACAGCCATGGGG
AACCAGCCTGAGGCCACAAGGCTGCTCCTGAGTGCCGGATGTGGGGTGGATGCTCAGAATGGCA
CACGCAGCACAGCCCTACACGTGGCTGTACAGAGGGGCTTCCTAGAGGTGGTAAAGATCCTGTG
TGAACATGGTTGTGATGTCAACTTGCCGGATGCCCATGCAGACACACCCCTGCATTCTGCCATC
TCTGCGGGTGCCGGTGCCAGCAGCATTGTTGAAGTCCTCACCGAGGTGCCTGGCATCGATGTCA
CTGCTACCAATAGCCAGGGCTTCACACTGCTGCACCATGCATCCCTCAAGGGCCATGTGCTAGC
AGTTAGAAAGATTCTGGCAAGAGCACGGCAGCTGGTGGATGCCAAGAAGGAGGACGGCTTTACT
GCGCTACATCTGGCAGCTCTTAACAACCACCGTGAGGTGGCCCAGGTCCTAATCCGAGAGGGCC
GCTGCGATGTGAATGTGCGAAACAGGAAGCTTCAATCCCCACTGCATCTGGCTGTGCAGCAGGC
CCACCTGGGGCTCGTACCGCTGCTGGTGGACGCTGGCTGCAATGTCAACACTGAGGATGAGGAG
GGTGACACAGCCCTGCATGTGGCACTACAGCGTCATCAGCTGCTGCCCCTGGTGGCTGACAGGG
CTGGGGGAGACCCAGGGCCCTTGCAGCTGCTGTCAAGGTTACAGGCCTCAGGCCTCCCAGGCAG
CACAGAGTTGACTGTAGGCGCCGCAGTGGCCTGCTTCCTGGCATTGGAGGGTGCTGATGTGAGC
TACGCAAACCACCGCGGCCGGAGCCCACTGGACCTGGCCACAGAAGGCCGAGTGCTCAAGGCCT
TGCAGGGCTGTGCCCAGCGCTTCAGGGAGCGACAGGCAGGTGGCGGTGGGGGTGTGCCCCCGGG
CCCCCGGCATGTGCTGAGTACTCCTAACACCGTGACGAACCTGCATGTGTCTGGCACAGCAGGG
CCAGAAGCTGCCGAGTGCCTGGTGTGCTCGGAGCTGGCATTGCTAGTTCTGTTCTCACCGTGTC
AGCACCGCACAGTGTGTGAGGAGTGCGCACGAAGGATGAAGAAGTGTATCAGGTGCCAGGTGAT
CATCAGCAAGAAGCTTCGCCCAGATGGTTCAGAGGTGGTTAATGCCATCCAGGTGCCCGGCCCG
CCTCGGCAACTGGTAGAGGAGCTACAGAGTCGCTACAGGCAGATGGAGGAGCGCATCACCTGCC
CCATCTGCATCGACAGCCACATCCGCCTGGTGTTCCAGTGCGGCCATGGAGCATGTGCGCCCTG
TGGCGCTGCCCTTAACGCCTGCCCCATTTGCCGCCAGCCCATCCGTGACCGCATTCAGATCTTC
GTGTGAGCGCACTACACACGCTGTGGCTGAGCCCAGGCTCTCCTTCAAAACTCCTGTATTTTAT
AAAAAGATTATCGGA

hide sequence

RefSeq Acc Id:

XM_017593553 ⟹ XP_017449042

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	171,526,038 - 171,542,479 (-)	NCBI
mRatBN7.2	5	166,243,776 - 166,259,892 (-)	NCBI
Rnor_6.0	5	173,082,944 - 173,099,353 (-)	NCBI

Sequence:

show sequence

GGAGGCAAAGGCTGTTGGGGCTCCATGGGTTCGAGGTCATGGCTCGAGGTCAACAAACTGAGGT
CCAGGTTATGTTGCTACATGTTGCTACATTTTGCTACATAGTGAAACCTTATTTCAAAAAGAAG
GGGGGAAAAAAGCCAAAAGAATTACTTTGGATGCGTTTTCGCTACATCTCTGGAAACCCCACCC
GTTTCAGGCAAGACGTCACCCGAAGCTTCTGTCTCCAAGGCAACAGAGAGCGTCCTGGGAACTT
GTACTGCGCAGGAGACACGTGCCGCTCTGGCTCCGCCCAGACGCACTTCCGGGCGCGACTTTGC
CCGCATCACCTCTCAACGCTCACTTTCTGTTCCAAGGATGCCAGGACGCAGGTATTTCCAGTTT
CTTCTTTAGAGTAGCAGAGCTCCCGCTGGCCATACCGCGGCTGTCGGTCAGTTTGCTGCCAGAC
CAGACAAATGTTAACTGCGTCTCAGCACCCCTGGCCATAGGGTTGGATCTCCGGGGGCTTTCAG
AAAGGAAGGTCAGCACGGCGGAGCCCAGTCCCAAGTCTCCAAGCATCAGGGCTTCCTGCCCGAT
TCTCAAGGCGGGTGGGGGACACTGGACCTCCAGACAGCCTGGCTCCCTGCCTTCCTGTTTGGTT
TGCTGTATTCTATGTTGGCAATGGCTGCTAGTTTCCCACAGGAAGTTTTGGCCCAGGAAGCAAA
TTTGTGGCCCAGGAAGTAGCAACTAAATGCCTGGGATGCTGACTAGAGGCTTCTTTGTGTTCTA
AGGTCTTTGAACAACCCCCCCTCACCATGGACCTGGACCCCCATGCAGGTGTGCAGGTGGGCAT
GCGTGTGGTACGCGGAATGGACTGGAAATGGGGCCAGCAGGATGGAGGTGAGGGCGGTGTGGGC
ACCGTGGTGGAGCTTGGCCGCCATGGCAGCCCCTCGACCCCCGACCGTACAGTTGTCGTTCAGT
GGGACCAGGGCACACGTACCAACTATCGAGCTGGCTACCAAGGTGCCCATGACCTGTTGCTCTA
TGACAACGCCCAAATCGGTATCCGCCATCCCAACATCATCTGTGACTGTTGCAAGAAACATGGG
CTTCGTGGCATGCGTTGGAAGTGCCGTGTCTGCTTTGACTATGATCTCTGCACGCAGTGCTACA
TGCACAACAAACATGACCTTACCCATGCCTTCGAGCGCTATGAGACATCTCACTCTCGCCCGGT
TACGCTGAGTCCCCGACAGGGCCTCCCTCGAATCCCACTGAGGGGCATCTTTCAAGGAGCAAAA
GTGGTACGAGGCCCTGACTGGGAATGGGGCTCACAAGATGGAGGGGAAGGCAAGACAGGCCGTG
TGGTGGACATCCGTGGCTGGGATGTGGAGACAGGCCGAAGTGTGGCCAGTGTGACATGGGCAGA
TGGAACCACAAATGTGTACCGAGTGGGCCACAAAGGCAAGGTGGATCTCAAATGTGTTGGTGAG
GCAGCTGGCGGCTTTTACTACAAGGAGCACCTCCCGAAGCTTGGCAAGCCAGCAGAGCTACAGC
GCAGGGTGAGTGCTGATGGCCAGCCCTTCCAGCGTGGGGACAAGGTCAAGTGTCTGCTGGACAC
AGATGTCCTAAGGGACATGCAAGAAGGCCATGGTGGCTGGAACCCTAGGATGGCAGAGTTTATC
GGACAGATGGGCACCGTGCACCGCATCACAGACCGTGGGGACGTGCGTGTGCAGTTCAACCATG
AAACCCGCTGGACCTTCCACCCTGGGGCTCTCACCAAGCACAACAGCTTCTGGGTAGGTGATGT
GGTCCGGGTCATCGATGACCTTGACACTGTGAAGCGACTGCAAGCTGGACATGGAGAATGGACT
GACGACATGGCCCCCGCCCTGGGCCGAGTGGGGAAAGTGGTGAAGGTGTTTGGAGATGGAAACT
TGCGTGTGGCGGTTGGTGGCCAGCGGTGGACCTTCAGCCCCGCCTGCCTAGTGGCCTGCCGGCC
TGAGGAGGATGCCAACCTGGGCGTGGCTGAGCGCGCCAGAGAGAACAAAAGTGCGGCATCCGTC
CCAGTGGCTGGTGGGAGGCAGGGCCGCCCCTGGCCAGCACTTACCCCAACCCTGCCCCCAGGCT
CACTGAGTGTGGCCCTGGACAAGCTTCGGACACAGAAGAGCGACCCAGAGCACCCAGGGAGGCT
GGTAGTGGAGGCTGCACTGGGAAATGTAGCCCGGGCCCTGGACCTGCTTCGAAGGCATCCTGAG
CAGGTGGACACCAAGAACCAGGGTAGGACTGCCCTGCAGGTGGCTGCTTACCTGGGCCAGGTAG
AACTGGTACGGCTGCTGCTGCAGGCAAGAGCAAGTGTGGACCTGCTGGATGAGGAGGGCAACAC
TGCCCTTCACTACACAGCCATGGGGAACCAGCCTGAGGCCACAAGGCTGCTCCTGAGTGCCGGA
TGTGGGGTGGATGCTCAGAATGGCACACGCAGCACAGCCCTACACGTGGCTGTACAGAGGGGCT
TCCTAGAGGTGGTAAAGATCCTGTGTGAACATGGTTGTGATGTCAACTTGCCGGATGCCCATGC
AGACACACCCCTGCATTCTGCCATCTCTGCGGGTGCCGGTGCCAGCAGCATTGTTGAAGTCCTC
ACCGAGGTGCCTGGCATCGATGTCACTGCTACCAATAGCCAGGGCTTCACACTGCTGCACCATG
CATCCCTCAAGGGCCATGTGCTAGCAGTTAGAAAGATTCTGGCAAGAGCACGGCAGCTGGTGGA
TGCCAAGAAGGAGGACGGCTTTACTGCGCTACATCTGGCAGCTCTTAACAACCACCGTGAGGTG
GCCCAGGTCCTAATCCGAGAGGGCCGCTGCGATGTGAATGTGCGAAACAGGAAGCTTCAATCCC
CACTGCATCTGGCTGTGCAGCAGGCCCACCTGGGGCTCGTACCGCTGCTGGTGGACGCTGGCTG
CAATGTCAACACTGAGGATGAGGAGGGTGACACAGCCCTGCATGTGGCACTACAGCGTCATCAG
CTGCTGCCCCTGGTGGCTGACAGGGCTGGGGGAGACCCAGGGCCCTTGCAGCTGCTGTCAAGGT
TACAGGCCTCAGGCCTCCCAGGCAGCACAGAGTTGACTGTAGGCGCCGCAGTGGCCTGCTTCCT
GGCATTGGAGGGTGCTGATGTGAGCTACGCAAACCACCGCGGCCGGAGCCCACTGGACCTGGCC
ACAGAAGGCCGAGTGCTCAAGGCCTTGCAGGGCTGTGCCCAGCGCTTCAGGGAGCGACAGGCAG
GTGGCGGTGGGGGTGTGCCCCCGGGCCCCCGGCATGTGCTGAGTACTCCTAACACCGTGACGAA
CCTGCATGTGTCTGGCACAGCAGGGCCAGAAGCTGCCGAGTGCCTGGTGTGCTCGGAGCTGGCA
TTGCTAGTTCTGTTCTCACCGTGTCAGCACCGCACAGTGTGTGAGGAGTGCGCACGAAGGATGA
AGAAGTGTATCAGGTGCCAGGTGATCATCAGCAAGAAGCTTCGCCCAGATGGTTCAGAGGTGGT
TAATGCCATCCAGGTGCCCGGCCCGCCTCGGCAACTGGTAGAGGAGCTACAGAGTCGCTACAGG
CAGATGGAGGAGCGCATCACCTGCCCCATCTGCATCGACAGCCACATCCGCCTGGTGTTCCAGT
GCGGCCATGGAGCATGTGCGCCCTGTGGCGCTGCCCTTAACGCCTGCCCCATTTGCCGCCAGCC
CATCCGTGACCGCATTCAGATCTTCGTGTGAGCGCACTACACACGCTGTGGCTGAGCCCAGGCT
CTCCTTCAAAACTCCTGTATTTTATAAAAAGATTATCGGA

hide sequence

RefSeq Acc Id:

XM_017593554 ⟹ XP_017449043

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	171,526,038 - 171,542,479 (-)	NCBI
mRatBN7.2	5	166,243,776 - 166,259,944 (-)	NCBI
Rnor_6.0	5	173,082,944 - 173,099,353 (-)	NCBI

Sequence:

show sequence

GGAGGCAAAGGCTGTTGGGGCTCCATGGGTTCGAGGTCATGGCTCGAGGTCAACAAACTGAGGT
CCAGGTTATGTTGCTACATGTTGCTACATTTTGCTACATAGTGAAACCTTATTTCAAAAAGAAG
GGGGGAAAAAAGCCAAAAGAATTACTTTGGATGCGTTTTCGCTACATCTCTGGAAACCCCACCC
GTTTCAGGCAAGACGTCACCCGAAGCTTCTGTCTCCAAGGCAACAGAGAGCGTCCTGGGAACTT
GTACTGCGCAGGAGACACGTGCCGCTCTGGCTCCGCCCAGACGCACTTCCGGGCGCGACTTTGC
CCGCATCACCTCTCAACGCTCACTTTCTGTTCCAAGGATGCCAGGACGCAGATGTTAACTGCGT
CTCAGCACCCCTGGCCATAGGGTTGGATCTCCGGGGGCTTTCAGAAAGGAAGGTCAGCACGGCG
GAGCCCAGTCCCAAGTCTCCAAGCATCAGGGCTTCCTGCCCGATTCTCAAGGCGGGTGGGGGAC
ACTGGACCTCCAGACAGCCTGGCTCCCTGCCTTCCTGTTTGGTTTGCTGTATTCTATGTTGGCA
ATGGCTGCTAGTTTCCCACAGGAAGTTTTGGCCCAGGAAGCAAATTTGTGGCCCAGGAAGTAGC
AACTAAATGCCTGGGATGCTGACTAGAGGCTTCTTTGTGTTCTAAGGTCTTTGAACAACCCCCC
CTCACCATGGACCTGGACCCCCATGCAGGTGTGCAGGTGGGCATGCGTGTGGTACGCGGAATGG
ACTGGAAATGGGGCCAGCAGGATGGAGGTGAGGGCGGTGTGGGCACCGTGGTGGAGCTTGGCCG
CCATGGCAGCCCCTCGACCCCCGACCGTACAGTTGTCGTTCAGTGGGACCAGGGCACACGTACC
AACTATCGAGCTGGCTACCAAGGTGCCCATGACCTGTTGCTCTATGACAACGCCCAAATCGGTA
TCCGCCATCCCAACATCATCTGTGACTGTTGCAAGAAACATGGGCTTCGTGGCATGCGTTGGAA
GTGCCGTGTCTGCTTTGACTATGATCTCTGCACGCAGTGCTACATGCACAACAAACATGACCTT
ACCCATGCCTTCGAGCGCTATGAGACATCTCACTCTCGCCCGGTTACGCTGAGTCCCCGACAGG
GCCTCCCTCGAATCCCACTGAGGGGCATCTTTCAAGGAGCAAAAGTGGTACGAGGCCCTGACTG
GGAATGGGGCTCACAAGATGGAGGGGAAGGCAAGACAGGCCGTGTGGTGGACATCCGTGGCTGG
GATGTGGAGACAGGCCGAAGTGTGGCCAGTGTGACATGGGCAGATGGAACCACAAATGTGTACC
GAGTGGGCCACAAAGGCAAGGTGGATCTCAAATGTGTTGGTGAGGCAGCTGGCGGCTTTTACTA
CAAGGAGCACCTCCCGAAGCTTGGCAAGCCAGCAGAGCTACAGCGCAGGGTGAGTGCTGATGGC
CAGCCCTTCCAGCGTGGGGACAAGGTCAAGTGTCTGCTGGACACAGATGTCCTAAGGGACATGC
AAGAAGGCCATGGTGGCTGGAACCCTAGGATGGCAGAGTTTATCGGACAGATGGGCACCGTGCA
CCGCATCACAGACCGTGGGGACGTGCGTGTGCAGTTCAACCATGAAACCCGCTGGACCTTCCAC
CCTGGGGCTCTCACCAAGCACAACAGCTTCTGGGTAGGTGATGTGGTCCGGGTCATCGATGACC
TTGACACTGTGAAGCGACTGCAAGCTGGACATGGAGAATGGACTGACGACATGGCCCCCGCCCT
GGGCCGAGTGGGGAAAGTGGTGAAGGTGTTTGGAGATGGAAACTTGCGTGTGGCGGTTGGTGGC
CAGCGGTGGACCTTCAGCCCCGCCTGCCTAGTGGCCTGCCGGCCTGAGGAGGATGCCAACCTGG
GCGTGGCTGAGCGCGCCAGAGAGAACAAAAGTGCGGCATCCGTCCCAGTGGCTGGTGGGAGGCA
GGGCCGCCCCTGGCCAGCACTTACCCCAACCCTGCCCCCAGGCTCACTGAGTGTGGCCCTGGAC
AAGCTTCGGACACAGAAGAGCGACCCAGAGCACCCAGGGAGGCTGGTAGTGGAGGCTGCACTGG
GAAATGTAGCCCGGGCCCTGGACCTGCTTCGAAGGCATCCTGAGCAGGTGGACACCAAGAACCA
GGGTAGGACTGCCCTGCAGGTGGCTGCTTACCTGGGCCAGGTAGAACTGGTACGGCTGCTGCTG
CAGGCAAGAGCAAGTGTGGACCTGCTGGATGAGGAGGGCAACACTGCCCTTCACTACACAGCCA
TGGGGAACCAGCCTGAGGCCACAAGGCTGCTCCTGAGTGCCGGATGTGGGGTGGATGCTCAGAA
TGGCACACGCAGCACAGCCCTACACGTGGCTGTACAGAGGGGCTTCCTAGAGGTGGTAAAGATC
CTGTGTGAACATGGTTGTGATGTCAACTTGCCGGATGCCCATGCAGACACACCCCTGCATTCTG
CCATCTCTGCGGGTGCCGGTGCCAGCAGCATTGTTGAAGTCCTCACCGAGGTGCCTGGCATCGA
TGTCACTGCTACCAATAGCCAGGGCTTCACACTGCTGCACCATGCATCCCTCAAGGGCCATGTG
CTAGCAGTTAGAAAGATTCTGGCAAGAGCACGGCAGCTGGTGGATGCCAAGAAGGAGGACGGCT
TTACTGCGCTACATCTGGCAGCTCTTAACAACCACCGTGAGGTGGCCCAGGTCCTAATCCGAGA
GGGCCGCTGCGATGTGAATGTGCGAAACAGGAAGCTTCAATCCCCACTGCATCTGGCTGTGCAG
CAGGCCCACCTGGGGCTCGTACCGCTGCTGGTGGACGCTGGCTGCAATGTCAACACTGAGGATG
AGGAGGGTGACACAGCCCTGCATGTGGCACTACAGCGTCATCAGCTGCTGCCCCTGGTGGCTGA
CAGGGCTGGGGGAGACCCAGGGCCCTTGCAGCTGCTGTCAAGGTTACAGGCCTCAGGCCTCCCA
GGCAGCACAGAGTTGACTGTAGGCGCCGCAGTGGCCTGCTTCCTGGCATTGGAGGGTGCTGATG
TGAGCTACGCAAACCACCGCGGCCGGAGCCCACTGGACCTGGCCACAGAAGGCCGAGTGCTCAA
GGCCTTGCAGGGCTGTGCCCAGCGCTTCAGGGAGCGACAGGCAGGTGGCGGTGGGGGTGTGCCC
CCGGGCCCCCGGCATGTGCTGAGTACTCCTAACACCGTGACGAACCTGCATGTGTCTGGCACAG
CAGGGCCAGAAGCTGCCGAGTGCCTGGTGTGCTCGGAGCTGGCATTGCTAGTTCTGTTCTCACC
GTGTCAGCACCGCACAGTGTGTGAGGAGTGCGCACGAAGGATGAAGAAGTGTATCAGGTGCCAG
GTGATCATCAGCAAGAAGCTTCGCCCAGATGGTTCAGAGGTGGTTAATGCCATCCAGGTGCCCG
GCCCGCCTCGGCAACTGGTAGAGGAGCTACAGAGTCGCTACAGGCAGATGGAGGAGCGCATCAC
CTGCCCCATCTGCATCGACAGCCACATCCGCCTGGTGTTCCAGTGCGGCCATGGAGCATGTGCG
CCCTGTGGCGCTGCCCTTAACGCCTGCCCCATTTGCCGCCAGCCCATCCGTGACCGCATTCAGA
TCTTCGTGTGAGCGCACTACACACGCTGTGGCTGAGCCCAGGCTCTCCTTCAAAACTCCTGTAT
TTTATAAAAAGATTATCGGA

hide sequence

RefSeq Acc Id:

XM_017593555 ⟹ XP_017449044

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	171,526,038 - 171,541,823 (-)	NCBI
mRatBN7.2	5	166,243,776 - 166,259,620 (-)	NCBI
Rnor_6.0	5	173,082,944 - 173,098,545 (-)	NCBI

Sequence:

show sequence

GGGGGCCGGGCCGGGCGCCCTCCCAGCGCCGGGGGCGGTGGCACGGGGCCTAGGGGGGCCTGAT
CATCCTGACGAGGCTGAGGTCTTGTCGGCCGACCTCGGCCCTTCAGCACGACCGGCTTTTAGTC
CTTCCCCCCCGGACCCAGCTCGTGCCCGTTGCGCGTTCTCGATGTTAACTGCGTCTCAGCACCC
CTGGCCATAGGGTTGGATCTCCGGGGGCTTTCAGAAAGGAAGGTCAGCACGGCGGAGCCCAGTC
CCAAGTCTCCAAGCATCAGGGCTTCCTGCCCGATTCTCAAGGCGGGTGGGGGACACTGGACCTC
CAGACAGCCTGGCTCCCTGCCTTCCTGTTTGGTTTGCTGTATTCTATGTTGGCAATGGCTGCTA
GTTTCCCACAGGAAGTTTTGGCCCAGGAAGCAAATTTGTGGCCCAGGAAGTAGCAACTAAATGC
CTGGGATGCTGACTAGAGGCTTCTTTGTGTTCTAAGGTCTTTGAACAACCCCCCCTCACCATGG
ACCTGGACCCCCATGCAGGTGTGCAGGTGGGCATGCGTGTGGTACGCGGAATGGACTGGAAATG
GGGCCAGCAGGATGGAGGTGAGGGCGGTGTGGGCACCGTGGTGGAGCTTGGCCGCCATGGCAGC
CCCTCGACCCCCGACCGTACAGTTGTCGTTCAGTGGGACCAGGGCACACGTACCAACTATCGAG
CTGGCTACCAAGGTGCCCATGACCTGTTGCTCTATGACAACGCCCAAATCGGTATCCGCCATCC
CAACATCATCTGTGACTGTTGCAAGAAACATGGGCTTCGTGGCATGCGTTGGAAGTGCCGTGTC
TGCTTTGACTATGATCTCTGCACGCAGTGCTACATGCACAACAAACATGACCTTACCCATGCCT
TCGAGCGCTATGAGACATCTCACTCTCGCCCGGTTACGCTGAGTCCCCGACAGGGCCTCCCTCG
AATCCCACTGAGGGGCATCTTTCAAGGAGCAAAAGTGGTACGAGGCCCTGACTGGGAATGGGGC
TCACAAGATGGAGGGGAAGGCAAGACAGGCCGTGTGGTGGACATCCGTGGCTGGGATGTGGAGA
CAGGCCGAAGTGTGGCCAGTGTGACATGGGCAGATGGAACCACAAATGTGTACCGAGTGGGCCA
CAAAGGCAAGGTGGATCTCAAATGTGTTGGTGAGGCAGCTGGCGGCTTTTACTACAAGGAGCAC
CTCCCGAAGCTTGGCAAGCCAGCAGAGCTACAGCGCAGGGTGAGTGCTGATGGCCAGCCCTTCC
AGCGTGGGGACAAGGTCAAGTGTCTGCTGGACACAGATGTCCTAAGGGACATGCAAGAAGGCCA
TGGTGGCTGGAACCCTAGGATGGCAGAGTTTATCGGACAGATGGGCACCGTGCACCGCATCACA
GACCGTGGGGACGTGCGTGTGCAGTTCAACCATGAAACCCGCTGGACCTTCCACCCTGGGGCTC
TCACCAAGCACAACAGCTTCTGGGTAGGTGATGTGGTCCGGGTCATCGATGACCTTGACACTGT
GAAGCGACTGCAAGCTGGACATGGAGAATGGACTGACGACATGGCCCCCGCCCTGGGCCGAGTG
GGGAAAGTGGTGAAGGTGTTTGGAGATGGAAACTTGCGTGTGGCGGTTGGTGGCCAGCGGTGGA
CCTTCAGCCCCGCCTGCCTAGTGGCCTGCCGGCCTGAGGAGGATGCCAACCTGGGCGTGGCTGA
GCGCGCCAGAGAGAACAAAAGTGCGGCATCCGTCCCAGTGGCTGGTGGGAGGCAGGGCCGCCCC
TGGCCAGCACTTACCCCAACCCTGCCCCCAGGCTCACTGAGTGTGGCCCTGGACAAGCTTCGGA
CACAGAAGAGCGACCCAGAGCACCCAGGGAGGCTGGTAGTGGAGGCTGCACTGGGAAATGTAGC
CCGGGCCCTGGACCTGCTTCGAAGGCATCCTGAGCAGGTGGACACCAAGAACCAGGGTAGGACT
GCCCTGCAGGTGGCTGCTTACCTGGGCCAGGTAGAACTGGTACGGCTGCTGCTGCAGGCAAGAG
CAAGTGTGGACCTGCTGGATGAGGAGGGCAACACTGCCCTTCACTACACAGCCATGGGGAACCA
GCCTGAGGCCACAAGGCTGCTCCTGAGTGCCGGATGTGGGGTGGATGCTCAGAATGGCACACGC
AGCACAGCCCTACACGTGGCTGTACAGAGGGGCTTCCTAGAGGTGGTAAAGATCCTGTGTGAAC
ATGGTTGTGATGTCAACTTGCCGGATGCCCATGCAGACACACCCCTGCATTCTGCCATCTCTGC
GGGTGCCGGTGCCAGCAGCATTGTTGAAGTCCTCACCGAGGTGCCTGGCATCGATGTCACTGCT
ACCAATAGCCAGGGCTTCACACTGCTGCACCATGCATCCCTCAAGGGCCATGTGCTAGCAGTTA
GAAAGATTCTGGCAAGAGCACGGCAGCTGGTGGATGCCAAGAAGGAGGACGGCTTTACTGCGCT
ACATCTGGCAGCTCTTAACAACCACCGTGAGGTGGCCCAGGTCCTAATCCGAGAGGGCCGCTGC
GATGTGAATGTGCGAAACAGGAAGCTTCAATCCCCACTGCATCTGGCTGTGCAGCAGGCCCACC
TGGGGCTCGTACCGCTGCTGGTGGACGCTGGCTGCAATGTCAACACTGAGGATGAGGAGGGTGA
CACAGCCCTGCATGTGGCACTACAGCGTCATCAGCTGCTGCCCCTGGTGGCTGACAGGGCTGGG
GGAGACCCAGGGCCCTTGCAGCTGCTGTCAAGGTTACAGGCCTCAGGCCTCCCAGGCAGCACAG
AGTTGACTGTAGGCGCCGCAGTGGCCTGCTTCCTGGCATTGGAGGGTGCTGATGTGAGCTACGC
AAACCACCGCGGCCGGAGCCCACTGGACCTGGCCACAGAAGGCCGAGTGCTCAAGGCCTTGCAG
GGCTGTGCCCAGCGCTTCAGGGAGCGACAGGCAGGTGGCGGTGGGGGTGTGCCCCCGGGCCCCC
GGCATGTGCTGAGTACTCCTAACACCGTGACGAACCTGCATGTGTCTGGCACAGCAGGGCCAGA
AGCTGCCGAGTGCCTGGTGTGCTCGGAGCTGGCATTGCTAGTTCTGTTCTCACCGTGTCAGCAC
CGCACAGTGTGTGAGGAGTGCGCACGAAGGATGAAGAAGTGTATCAGGTGCCAGGTGATCATCA
GCAAGAAGCTTCGCCCAGATGGTTCAGAGGTGGTTAATGCCATCCAGGTGCCCGGCCCGCCTCG
GCAACTGGTAGAGGAGCTACAGAGTCGCTACAGGCAGATGGAGGAGCGCATCACCTGCCCCATC
TGCATCGACAGCCACATCCGCCTGGTGTTCCAGTGCGGCCATGGAGCATGTGCGCCCTGTGGCG
CTGCCCTTAACGCCTGCCCCATTTGCCGCCAGCCCATCCGTGACCGCATTCAGATCTTCGTGTG
AGCGCACTACACACGCTGTGGCTGAGCCCAGGCTCTCCTTCAAAACTCCTGTATTTTATAAAAA
GATTATCGGA

hide sequence

RefSeq Acc Id:

XM_017593558 ⟹ XP_017449047

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	171,526,038 - 171,532,488 (-)	NCBI
mRatBN7.2	5	166,243,776 - 166,259,619 (-)	NCBI
Rnor_6.0	5	173,082,944 - 173,098,545 (-)	NCBI

Sequence:

show sequence

GGGGGCCGGGCCGGGCGCCCTCCCAGCGCCGGGGGCGGTGGCACGGGGCCTAGGGGGGCCTGAT
CATCCTGACGAGGCTGAGGTCTTGTCGGCCGACCTCGGCCCTTCAGCACGACCGGCTTTTAGTC
CTTCCCCCCCGGACCCAGCTCGTGCCCGTTGCGCGTTCTCGGTGCGTGGGGGTGATGCAGCGTG
TCCCAGCCACCAGACCCATGGGAGCTTTTTAAGGCGACCAGCGGCCTCTGTCCCTTCTCAGATG
TTAACTGCGTCTCAGCACCCCTGGCCATAGGGTTGGATCTCCGGGGGCTTTCAGAAAGGAAGGT
CAGCACGGCGGAGCCCAGTCCCAAGTCTCCAAGCATCAGGGCTTCCTGCCCGATTCTCAAGGCG
GGTGGGGGACACTGGACCTCCAGACAGCCTGGCTCCCTGCCTTCCTGTTTGGTTTGCTGTATTC
TATGTTGGCAATGGCTGCTAGTTTCCCACAGGAAGTTTTGGCCCAGGAAGCAAATTTGTGGCCC
AGGAAGTAGCAACTAAATGCCTGGGATGCTGACTAGAGGCTTCTTTGTGTTCTAAGGTCTTTGA
ACAACCCCCCCTCACCATGGACCTGGACCCCCATGCAGGTGTGCAGGTGGGCATGCGTGTGGTA
CGCGGAATGGACTGGAAATGGGGCCAGCAGGATGGAGGTGAGGGCGGTGTGGGCACCGTGGTGG
AGCTTGGCCGCCATGGCAGCCCCTCGACCCCCGACCGTACAGTTGTCGTTCAGTGGGACCAGGG
CACACGTACCAACTATCGAGCTGGCTACCAAGGTGCCCATGACCTGTTGCTCTATGACAACGCC
CAAATCGGTATCCGCCATCCCAACATCATCTGTGACTGTTGCAAGAAACATGGGCTTCGTGGCA
TGCGTTGGAAGTGCCGTGTCTGCTTTGACTATGATCTCTGCACGCAGTGCTACATGCACAACAA
ACATGACCTTACCCATGCCTTCGAGCGCTATGAGACATCTCACTCTCGCCCGGTTACGCTGAGT
CCCCGACAGGGCCTCCCTCGAATCCCACTGAGGGGCATCTTTCAAGGAGCAAAAGTGGTACGAG
GCCCTGACTGGGAATGGGGCTCACAAGATGGAGGGGAAGGCAAGACAGGCCGTGTGGTGGACAT
CCGTGGCTGGGATGTGGAGACAGGCCGAAGTGTGGCCAGTGTGACATGGGCAGATGGAACCACA
AATGTGTACCGAGTGGGCCACAAAGGCAAGGTGGATCTCAAATGTGTTGGTGAGGCAGCTGGCG
GCTTTTACTACAAGGAGCACCTCCCGAAGCTTGGCAAGCCAGCAGAGCTACAGCGCAGGGTGAG
TGCTGATGGCCAGCCCTTCCAGCGTGGGGACAAGGTCAAGTGTCTGCTGGACACAGATGTCCTA
AGGGACATGCAAGAAGGCCATGGTGGCTGGAACCCTAGGATGGCAGAGTTTATCGGACAGATGG
GCACCGTGCACCGCATCACAGACCGTGGGGACGTGCGTGTGCAGTTCAACCATGAAACCCGCTG
GACCTTCCACCCTGGGGCTCTCACCAAGCACAACAGCTTCTGGGTAGGTGATGTGGTCCGGGTC
ATCGATGACCTTGACACTGTGAAGCGACTGCAAGCTGGACATGGAGAATGGACTGACGACATGG
CCCCCGCCCTGGGCCGAGTGGGGAAAGTGGTGAAGGTGTTTGGAGATGGAAACTTGCGTGTGGC
GGTTGGTGGCCAGCGGTGGACCTTCAGCCCCGCCTGCCTAGTGGCCTGCCGGCCTGAGGAGGAT
GCCAACCTGGGCGTGGCTGAGCGCGCCAGAGAGAACAAAAGCTCACTGAGTGTGGCCCTGGACA
AGCTTCGGACACAGAAGAGCGACCCAGAGCACCCAGGGAGGCTGGTAGTGGAGGCTGCACTGGG
AAATGTAGCCCGGGCCCTGGACCTGCTTCGAAGGCATCCTGAGCAGGTGGACACCAAGAACCAG
GGTAGGACTGCCCTGCAGGTGGCTGCTTACCTGGGCCAGGTAGAACTGGTACGGCTGCTGCTGC
AGGCAAGAGCAAGTGTGGACCTGCTGGATGAGGAGGGCAACACTGCCCTTCACTACACAGCCAT
GGGGAACCAGCCTGAGGCCACAAGGCTGCTCCTGAGTGCCGGATGTGGGGTGGATGCTCAGAAT
GGCACACGCAGCACAGCCCTACACGTGGCTGTACAGAGGGGCTTCCTAGAGGTGGTAAAGATCC
TGTGTGAACATGGTTGTGATGTCAACTTGCCGGATGCCCATGCAGACACACCCCTGCATTCTGC
CATCTCTGCGGGTGCCGGTGCCAGCAGCATTGTTGAAGTCCTCACCGAGGTGCCTGGCATCGAT
GTCACTGCTACCAATAGCCAGGGCTTCACACTGCTGCACCATGCATCCCTCAAGGGCCATGTGC
TAGCAGTTAGAAAGATTCTGGCAAGAGCACGGCAGCTGGTGGATGCCAAGAAGGAGGACGGCTT
TACTGCGCTACATCTGGCAGCTCTTAACAACCACCGTGAGGTGGCCCAGGTCCTAATCCGAGAG
GGCCGCTGCGATGTGAATGTGCGAAACAGGAAGCTTCAATCCCCACTGCATCTGGCTGTGCAGC
AGGCCCACCTGGGGCTCGTACCGCTGCTGGTGGACGCTGGCTGCAATGTCAACACTGAGGATGA
GGAGGGTGACACAGCCCTGCATGTGGCACTACAGCGTCATCAGCTGCTGCCCCTGGTGGCTGAC
AGGGCTGGGGGAGACCCAGGGCCCTTGCAGCTGCTGTCAAGGTTACAGGCCTCAGGCCTCCCAG
GCAGCACAGAGTTGACTGTAGGCGCCGCAGTGGCCTGCTTCCTGGCATTGGAGGGTGCTGATGT
GAGCTACGCAAACCACCGCGGCCGGAGCCCACTGGACCTGGCCACAGAAGGCCGAGTGCTCAAG
GCCTTGCAGGGCTGTGCCCAGCGCTTCAGGGAGCGACAGGCAGGTGGCGGTGGGGGTGTGCCCC
CGGGCCCCCGGCATGTGCTGAGTACTCCTAACACCGTGACGAACCTGCATGTGTCTGGCACAGC
AGGGCCAGAAGCTGCCGAGTGCCTGGTGTGCTCGGAGCTGGCATTGCTAGTTCTGTTCTCACCG
TGTCAGCACCGCACAGTGTGTGAGGAGTGCGCACGAAGGATGAAGAAGTGTATCAGGTGCCAGG
TGATCATCAGCAAGAAGCTTCGCCCAGATGGTTCAGAGGTGGTTAATGCCATCCAGGTGCCCGG
CCCGCCTCGGCAACTGGTAGAGGAGCTACAGAGTCGCTACAGGCAGATGGAGGAGCGCATCACC
TGCCCCATCTGCATCGACAGCCACATCCGCCTGGTGTTCCAGTGCGGCCATGGAGCATGTGCGC
CCTGTGGCGCTGCCCTTAACGCCTGCCCCATTTGCCGCCAGCCCATCCGTGACCGCATTCAGAT
CTTCGTGTGAGCGCACTACACACGCTGTGGCTGAGCCCAGGCTCTCCTTCAAAACTCCTGTATT
TTATAAAAAGATTATCGGA

hide sequence

RefSeq Acc Id:

XM_063288160 ⟹ XP_063144230

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	171,526,038 - 171,532,488 (-)	NCBI

RefSeq Acc Id:

XM_063288161 ⟹ XP_063144231

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	171,526,038 - 171,541,881 (-)	NCBI

RefSeq Acc Id:

XM_063288162 ⟹ XP_063144232

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	171,526,038 - 171,532,488 (-)	NCBI

RefSeq Acc Id:

XM_063288163 ⟹ XP_063144233

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	171,526,038 - 171,532,488 (-)	NCBI

RefSeq Acc Id:

XM_063288165 ⟹ XP_063144235

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	171,526,038 - 171,541,823 (-)	NCBI

RefSeq Acc Id:

XM_063288166 ⟹ XP_063144236

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	171,526,038 - 171,541,823 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001005901	(Get FASTA)	NCBI Sequence Viewer
	XP_006239656	(Get FASTA)	NCBI Sequence Viewer
	XP_017449042	(Get FASTA)	NCBI Sequence Viewer
	XP_017449043	(Get FASTA)	NCBI Sequence Viewer
	XP_017449044	(Get FASTA)	NCBI Sequence Viewer
	XP_017449047	(Get FASTA)	NCBI Sequence Viewer
	XP_063144230	(Get FASTA)	NCBI Sequence Viewer
	XP_063144231	(Get FASTA)	NCBI Sequence Viewer
	XP_063144232	(Get FASTA)	NCBI Sequence Viewer
	XP_063144233	(Get FASTA)	NCBI Sequence Viewer
	XP_063144235	(Get FASTA)	NCBI Sequence Viewer
	XP_063144236	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL81315	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000023696
	ENSRNOP00000023696.8
	ENSRNOP00000082241.1
GenBank Protein	Q68LP1	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001005901 ⟸ NM_001005901

- UniProtKB:

A0A140TAC8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDLDPHAGVQVGMRVVRGMDWKWGQQDGGEGGVGTVVELGRHGSPSTPDRTVVVQWDQGTRTNY
RAGYQGAHDLLLYDNAQIGIRHPNIICDCCKKHGLRGMRWKCRVCFDYDLCTQCYMHNKHDLTH
AFERYETSHSRPVTLSPRQGLPRIPLRGIFQGAKVVRGPDWEWGSQDGGEGKTGRVVDIRGWDV
ETGRSVASVTWADGTTNVYRVGHKGKVDLKCVGEAAGGFYYKEHLPKLGKPAELQRRVSADGQP
FQRGDKVKCLLDTDVLRDMQEGHGGWNPRMAEMGTVHRITDRGDVRVQFNHETRWTFHPGALTK
HNSFWVGDVVRVIDDLDTVKRLQAGHGEWTDDMAPALGRVGKVVKVFGDGNLRVAVGGQRWTFS
PACLVACRPEEDANLGVAERARENKSSLSVALDKLRTQKSDPEHPGRLVVEAALGNVARALDLL
RRHPEQVDTKNQGRTALQVAAYLGQVELVRLLLQARASVDLLDEEGNTALHYTAMGNQPEATRL
LLSAGCGVDAQNGTRSTALHVAVQRGFLEVVKILCEHGCDVNLPDAHADTPLHSAISAGAGASS
IVEVLTEVPGIDVTATNSQGFTLLHHASLKGHVLAVRKILARARQLVDAKKEDGFTALHLAALN
NHREVAQVLIREGRCDVNVRNRKLQSPLHLAVQQAHLGLVPLLVDAGCNVNTEDEEGDTALHVA
LQRHQLLPLVADRAGGDPGPLQLLSRLQASGLPGSTELTVGAAVACFLALEGADVSYANHRGRS
PLDLATEGRVLKALQGCAQRFRERQAGGGGGVPPGPRHVLSTPNTVTNLHVSGTAGPEAAECLV
CSELALLVLFSPCQHRTVCEECARRMKKCIRCQVIISKKLRPDGSEVVNAIQVPGPPRQLVEEL
QSRYRQMEERITCPICIDSHIRLVFQCGHGACAPCGAALNACPICRQPIRDRIQIFV

hide sequence

RefSeq Acc Id:	XP_006239656 ⟸ XM_006239594
- Peptide Label:	isoform X7
- UniProtKB:	A0A140TAC8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRWKCRVCFDYDLCTQCYMHNKHDLTHAFERYETSHSRPVTLSPRQGLPRIPLRGIFQGAKVVR GPDWEWGSQDGGEGKTGRVVDIRGWDVETGRSVASVTWADGTTNVYRVGHKGKVDLKCVGEAAG GFYYKEHLPKLGKPAELQRRVSADGQPFQRGDKVKCLLDTDVLRDMQEGHGGWNPRMAEFIGQM GTVHRITDRGDVRVQFNHETRWTFHPGALTKHNSFWVGDVVRVIDDLDTVKRLQAGHGEWTDDM APALGRVGKVVKVFGDGNLRVAVGGQRWTFSPACLVACRPEEDANLGVAERARENKSAASVPVA GGRQGRPWPALTPTLPPGSLSVALDKLRTQKSDPEHPGRLVVEAALGNVARALDLLRRHPEQVD TKNQGRTALQVAAYLGQVELVRLLLQARASVDLLDEEGNTALHYTAMGNQPEATRLLLSAGCGV DAQNGTRSTALHVAVQRGFLEVVKILCEHGCDVNLPDAHADTPLHSAISAGAGASSIVEVLTEV PGIDVTATNSQGFTLLHHASLKGHVLAVRKILARARQLVDAKKEDGFTALHLAALNNHREVAQV LIREGRCDVNVRNRKLQSPLHLAVQQAHLGLVPLLVDAGCNVNTEDEEGDTALHVALQRHQLLP LVADRAGGDPGPLQLLSRLQASGLPGSTELTVGAAVACFLALEGADVSYANHRGRSPLDLATEG RVLKALQGCAQRFRERQAGGGGGVPPGPRHVLSTPNTVTNLHVSGTAGPEAAECLVCSELALLV LFSPCQHRTVCEECARRMKKCIRCQVIISKKLRPDGSEVVNAIQVPGPPRQLVEELQSRYRQME ERITCPICIDSHIRLVFQCGHGACAPCGAALNACPICRQPIRDRIQIFV hide sequence

RefSeq Acc Id:	XP_017449043 ⟸ XM_017593554
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I5ZTL8 (UniProtKB/TrEMBL), A0A140TAC8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLDPHAGVQVGMRVVRGMDWKWGQQDGGEGGVGTVVELGRHGSPSTPDRTVVVQWDQGTRTNY RAGYQGAHDLLLYDNAQIGIRHPNIICDCCKKHGLRGMRWKCRVCFDYDLCTQCYMHNKHDLTH AFERYETSHSRPVTLSPRQGLPRIPLRGIFQGAKVVRGPDWEWGSQDGGEGKTGRVVDIRGWDV ETGRSVASVTWADGTTNVYRVGHKGKVDLKCVGEAAGGFYYKEHLPKLGKPAELQRRVSADGQP FQRGDKVKCLLDTDVLRDMQEGHGGWNPRMAEFIGQMGTVHRITDRGDVRVQFNHETRWTFHPG ALTKHNSFWVGDVVRVIDDLDTVKRLQAGHGEWTDDMAPALGRVGKVVKVFGDGNLRVAVGGQR WTFSPACLVACRPEEDANLGVAERARENKSAASVPVAGGRQGRPWPALTPTLPPGSLSVALDKL RTQKSDPEHPGRLVVEAALGNVARALDLLRRHPEQVDTKNQGRTALQVAAYLGQVELVRLLLQA RASVDLLDEEGNTALHYTAMGNQPEATRLLLSAGCGVDAQNGTRSTALHVAVQRGFLEVVKILC EHGCDVNLPDAHADTPLHSAISAGAGASSIVEVLTEVPGIDVTATNSQGFTLLHHASLKGHVLA VRKILARARQLVDAKKEDGFTALHLAALNNHREVAQVLIREGRCDVNVRNRKLQSPLHLAVQQA HLGLVPLLVDAGCNVNTEDEEGDTALHVALQRHQLLPLVADRAGGDPGPLQLLSRLQASGLPGS TELTVGAAVACFLALEGADVSYANHRGRSPLDLATEGRVLKALQGCAQRFRERQAGGGGGVPPG PRHVLSTPNTVTNLHVSGTAGPEAAECLVCSELALLVLFSPCQHRTVCEECARRMKKCIRCQVI ISKKLRPDGSEVVNAIQVPGPPRQLVEELQSRYRQMEERITCPICIDSHIRLVFQCGHGACAPC GAALNACPICRQPIRDRIQIFV hide sequence

RefSeq Acc Id:	XP_017449042 ⟸ XM_017593553
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I5ZTL8 (UniProtKB/TrEMBL), A0A140TAC8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLDPHAGVQVGMRVVRGMDWKWGQQDGGEGGVGTVVELGRHGSPSTPDRTVVVQWDQGTRTNY RAGYQGAHDLLLYDNAQIGIRHPNIICDCCKKHGLRGMRWKCRVCFDYDLCTQCYMHNKHDLTH AFERYETSHSRPVTLSPRQGLPRIPLRGIFQGAKVVRGPDWEWGSQDGGEGKTGRVVDIRGWDV ETGRSVASVTWADGTTNVYRVGHKGKVDLKCVGEAAGGFYYKEHLPKLGKPAELQRRVSADGQP FQRGDKVKCLLDTDVLRDMQEGHGGWNPRMAEFIGQMGTVHRITDRGDVRVQFNHETRWTFHPG ALTKHNSFWVGDVVRVIDDLDTVKRLQAGHGEWTDDMAPALGRVGKVVKVFGDGNLRVAVGGQR WTFSPACLVACRPEEDANLGVAERARENKSAASVPVAGGRQGRPWPALTPTLPPGSLSVALDKL RTQKSDPEHPGRLVVEAALGNVARALDLLRRHPEQVDTKNQGRTALQVAAYLGQVELVRLLLQA RASVDLLDEEGNTALHYTAMGNQPEATRLLLSAGCGVDAQNGTRSTALHVAVQRGFLEVVKILC EHGCDVNLPDAHADTPLHSAISAGAGASSIVEVLTEVPGIDVTATNSQGFTLLHHASLKGHVLA VRKILARARQLVDAKKEDGFTALHLAALNNHREVAQVLIREGRCDVNVRNRKLQSPLHLAVQQA HLGLVPLLVDAGCNVNTEDEEGDTALHVALQRHQLLPLVADRAGGDPGPLQLLSRLQASGLPGS TELTVGAAVACFLALEGADVSYANHRGRSPLDLATEGRVLKALQGCAQRFRERQAGGGGGVPPG PRHVLSTPNTVTNLHVSGTAGPEAAECLVCSELALLVLFSPCQHRTVCEECARRMKKCIRCQVI ISKKLRPDGSEVVNAIQVPGPPRQLVEELQSRYRQMEERITCPICIDSHIRLVFQCGHGACAPC GAALNACPICRQPIRDRIQIFV hide sequence

RefSeq Acc Id:	XP_017449044 ⟸ XM_017593555
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I5ZTL8 (UniProtKB/TrEMBL), A0A140TAC8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLDPHAGVQVGMRVVRGMDWKWGQQDGGEGGVGTVVELGRHGSPSTPDRTVVVQWDQGTRTNY RAGYQGAHDLLLYDNAQIGIRHPNIICDCCKKHGLRGMRWKCRVCFDYDLCTQCYMHNKHDLTH AFERYETSHSRPVTLSPRQGLPRIPLRGIFQGAKVVRGPDWEWGSQDGGEGKTGRVVDIRGWDV ETGRSVASVTWADGTTNVYRVGHKGKVDLKCVGEAAGGFYYKEHLPKLGKPAELQRRVSADGQP FQRGDKVKCLLDTDVLRDMQEGHGGWNPRMAEFIGQMGTVHRITDRGDVRVQFNHETRWTFHPG ALTKHNSFWVGDVVRVIDDLDTVKRLQAGHGEWTDDMAPALGRVGKVVKVFGDGNLRVAVGGQR WTFSPACLVACRPEEDANLGVAERARENKSAASVPVAGGRQGRPWPALTPTLPPGSLSVALDKL RTQKSDPEHPGRLVVEAALGNVARALDLLRRHPEQVDTKNQGRTALQVAAYLGQVELVRLLLQA RASVDLLDEEGNTALHYTAMGNQPEATRLLLSAGCGVDAQNGTRSTALHVAVQRGFLEVVKILC EHGCDVNLPDAHADTPLHSAISAGAGASSIVEVLTEVPGIDVTATNSQGFTLLHHASLKGHVLA VRKILARARQLVDAKKEDGFTALHLAALNNHREVAQVLIREGRCDVNVRNRKLQSPLHLAVQQA HLGLVPLLVDAGCNVNTEDEEGDTALHVALQRHQLLPLVADRAGGDPGPLQLLSRLQASGLPGS TELTVGAAVACFLALEGADVSYANHRGRSPLDLATEGRVLKALQGCAQRFRERQAGGGGGVPPG PRHVLSTPNTVTNLHVSGTAGPEAAECLVCSELALLVLFSPCQHRTVCEECARRMKKCIRCQVI ISKKLRPDGSEVVNAIQVPGPPRQLVEELQSRYRQMEERITCPICIDSHIRLVFQCGHGACAPC GAALNACPICRQPIRDRIQIFV hide sequence

RefSeq Acc Id:	XP_017449047 ⟸ XM_017593558
- Peptide Label:	isoform X2
- UniProtKB:	A0A140TAC8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLDPHAGVQVGMRVVRGMDWKWGQQDGGEGGVGTVVELGRHGSPSTPDRTVVVQWDQGTRTNY RAGYQGAHDLLLYDNAQIGIRHPNIICDCCKKHGLRGMRWKCRVCFDYDLCTQCYMHNKHDLTH AFERYETSHSRPVTLSPRQGLPRIPLRGIFQGAKVVRGPDWEWGSQDGGEGKTGRVVDIRGWDV ETGRSVASVTWADGTTNVYRVGHKGKVDLKCVGEAAGGFYYKEHLPKLGKPAELQRRVSADGQP FQRGDKVKCLLDTDVLRDMQEGHGGWNPRMAEFIGQMGTVHRITDRGDVRVQFNHETRWTFHPG ALTKHNSFWVGDVVRVIDDLDTVKRLQAGHGEWTDDMAPALGRVGKVVKVFGDGNLRVAVGGQR WTFSPACLVACRPEEDANLGVAERARENKSSLSVALDKLRTQKSDPEHPGRLVVEAALGNVARA LDLLRRHPEQVDTKNQGRTALQVAAYLGQVELVRLLLQARASVDLLDEEGNTALHYTAMGNQPE ATRLLLSAGCGVDAQNGTRSTALHVAVQRGFLEVVKILCEHGCDVNLPDAHADTPLHSAISAGA GASSIVEVLTEVPGIDVTATNSQGFTLLHHASLKGHVLAVRKILARARQLVDAKKEDGFTALHL AALNNHREVAQVLIREGRCDVNVRNRKLQSPLHLAVQQAHLGLVPLLVDAGCNVNTEDEEGDTA LHVALQRHQLLPLVADRAGGDPGPLQLLSRLQASGLPGSTELTVGAAVACFLALEGADVSYANH RGRSPLDLATEGRVLKALQGCAQRFRERQAGGGGGVPPGPRHVLSTPNTVTNLHVSGTAGPEAA ECLVCSELALLVLFSPCQHRTVCEECARRMKKCIRCQVIISKKLRPDGSEVVNAIQVPGPPRQL VEELQSRYRQMEERITCPICIDSHIRLVFQCGHGACAPCGAALNACPICRQPIRDRIQIFV hide sequence

RefSeq Acc Id:

ENSRNOP00000023696 ⟸ ENSRNOT00000023696

RefSeq Acc Id:

ENSRNOP00000082241 ⟸ ENSRNOT00000100849

RefSeq Acc Id:	XP_063144231 ⟸ XM_063288161
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063144236 ⟸ XM_063288166
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063144235 ⟸ XM_063288165
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063144233 ⟸ XM_063288163
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063144232 ⟸ XM_063288162
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063144230 ⟸ XM_063288160
- Peptide Label:	isoform X1

Protein Domains

MIB/HERC2 RING-type ZZ-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q68LP1-F1-model_v2	AlphaFold	Q68LP1	1-971	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694324

Promoter ID:

EPDNEW_R4849

Type:

multiple initiation site

Name:

Mib2_1

Description:

mindbomb E3 ubiquitin protein ligase 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	173,098,759 - 173,098,819	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1359469	AgrOrtholog
BioCyc Gene	G2FUF-38914	BioCyc
Ensembl Genes	ENSRNOG00000017564	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000023696.8	UniProtKB/TrEMBL
	ENSRNOT00000100849.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.20	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.30.40.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.30.60.90	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH3 Domains	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Ankyrin_rpt	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	MIB1/2_ZZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Mib_Herc2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Mib_Herc2_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH3_15	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Znf_RING	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Znf_ZZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Znf_ZZ_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene	474147	ENTREZGENE
PANTHER	E3 UBIQUITIN-PROTEIN LIGASE MIB2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	E3 UBIQUITIN-PROTEIN LIGASE MIB2-RELATED	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Ank	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ank_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ank_4	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ank_5	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	MIB_HERC2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PF00569	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH3_15	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	zf-C3HC4_3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Mib2	PhenoGen
PRINTS	ANKYRIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	ANK_REP_REGION	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	MIB_HERC2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ZF_RING_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ZF_ZZ_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ZF_ZZ_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000017564	RatGTEx
SMART	ANK	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RING	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ZnF_ZZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	RING/U-box	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF159034	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF48403	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A140TAC8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZTL8	ENTREZGENE, UniProtKB/TrEMBL
	A6IUR4_RAT	UniProtKB/TrEMBL
	MIB2_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-11-12	Mib2	MIB E3 ubiquitin protein ligase 2	Mib2	mindbomb E3 ubiquitin protein ligase 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-09-18	Mib2	mindbomb E3 ubiquitin protein ligase 2	LOC474147	RBSC-skeletrophin	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-07-29	LOC474147	RBSC-skeletrophin			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar