Galm (galactose mutarotase) - Rat Genome Database

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Gene: Galm (galactose mutarotase) Rattus norvegicus
Analyze
Symbol: Galm
Name: galactose mutarotase
RGD ID: 1359459
Description: Predicted to enable aldose 1-epimerase activity. Predicted to be involved in galactose catabolic process via UDP-galactose and glucose metabolic process. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in galactosemia 4. Orthologous to human GALM (galactose mutarotase); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: aldose 1-epimerase; galactose mutarotase (aldose 1-epimerase); MGC93738
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8620,589,775 - 20,641,516 (-)NCBIGRCr8
mRatBN7.2614,837,540 - 14,889,484 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl614,837,548 - 14,889,310 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx615,135,882 - 15,187,744 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0615,458,146 - 15,509,901 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0614,954,424 - 15,006,178 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.062,808,988 - 2,860,742 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl62,808,841 - 2,860,744 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.062,785,889 - 2,837,635 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.463,024,123 - 3,078,720 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.163,024,122 - 3,078,719 (+)NCBI
Celera614,514,739 - 14,566,190 (-)NCBICelera
Cytogenetic Map6q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GalmRatbuphthalmos  ISOGALM (Homo sapiens)8554872ClinVar Annotator: match by term: Congenital glaucomaClinVarPMID:19234632 more ...
GalmRatgalactosemia 4  ISOGALM (Homo sapiens)8554872ClinVar more ...ClinVarPMID:25741868 more ...
GalmRatgenetic disease  ISOGALM (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868 and PMID:28492532
GalmRatLynch syndrome  ISOGALM (Homo sapiens)8554872ClinVar Annotator: match by term: Hereditary nonpolyposis colorectal neoplasmsClinVarPMID:28492532
GalmRatRASopathy  ISOGALM (Homo sapiens)8554872ClinVar Annotator: match by term: RASopathyClinVarPMID:28492532
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GalmRatgalactosemia 4  ISOGALM (Homo sapiens)7240710 OMIM 

1 to 20 of 134 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GalmRat(+)-schisandrin B multiple interactionsEXP 6480464schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of GALM mRNA]CTDPMID:31150632
GalmRat(-)-epigallocatechin 3-gallate multiple interactionsISOGALM (Homo sapiens)6480464[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of GALM mRNACTDPMID:22079256
GalmRat1,2-dimethylhydrazine increases expressionISOGalm (Mus musculus)64804641 and 2-Dimethylhydrazine results in increased expression of GALM mRNACTDPMID:22206623
GalmRat17alpha-ethynylestradiol decreases expressionISOGALM (Homo sapiens)6480464Ethinyl Estradiol results in decreased expression of GALM mRNACTDPMID:18936297
GalmRat17alpha-ethynylestradiol affects expressionEXP 6480464Ethinyl Estradiol affects the expression of GALM mRNACTDPMID:26865667
GalmRat17alpha-ethynylestradiol affects expressionISOGALM (Homo sapiens)6480464Ethinyl Estradiol affects the expression of GALM mRNACTDPMID:26865667
GalmRat17beta-estradiol decreases expressionISOGALM (Homo sapiens)6480464Estradiol results in decreased expression of GALM mRNACTDPMID:20106945
GalmRat17beta-estradiol decreases expressionISOGalm (Mus musculus)6480464Estradiol results in decreased expression of GALM mRNACTDPMID:39298647
GalmRat17beta-estradiol increases expressionEXP 6480464Estradiol results in increased expression of GALM mRNACTDPMID:32145629
GalmRat17beta-estradiol multiple interactionsEXP 6480464[bisphenol A co-treated with Estradiol] results in decreased expression of GALM mRNACTDPMID:26496021
GalmRat2,3',4,4',5-Pentachlorobiphenyl decreases expressionISOGalm (Mus musculus)64804642 more ...CTDPMID:31388691
GalmRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOGalm (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased expression of GALM mRNACTDPMID:19770486
GalmRat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of GALM mRNACTDPMID:32109520 and PMID:33387578
GalmRat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOGalm (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of GALM mRNACTDPMID:21570461
GalmRat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOGALM (Homo sapiens)6480464Tetrachlorodibenzodioxin results in increased expression of GALM mRNACTDPMID:20106945 and PMID:21632981
GalmRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of GALM mRNACTDPMID:21215274
GalmRat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of GALM mRNACTDPMID:22298810
GalmRat2,3,7,8-Tetrachlorodibenzofuran increases expressionEXP 64804642 more ...CTDPMID:32109520
GalmRat2,4-dinitrotoluene affects expressionEXP 64804642 and 4-dinitrotoluene affects the expression of GALM mRNACTDPMID:21346803
GalmRat3-chloropropane-1,2-diol decreases expressionEXP 6480464alpha-Chlorohydrin results in decreased expression of GALM proteinCTDPMID:34915118

1 to 20 of 134 rows

Biological Process
1 to 10 of 10 rows

  
1 to 10 of 10 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GalmRatcytoplasm located_inIEAUniProtKB-SubCell:SL-00861600115GO_REF:0000044UniProtGO_REF:0000044
GalmRatcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043

Molecular Function
1 to 9 of 9 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GalmRataldose 1-epimerase activity enablesISOGALM (Homo sapiens)1624291 PMID:12753898 and PMID:30451973RGDPMID:12753898 and PMID:30451973
GalmRataldose 1-epimerase activity enablesIEAEC:5.1.3.31600115GO_REF:0000003UniProtGO_REF:0000003
GalmRataldose 1-epimerase activity enablesIEARHEA:10264 and RHEA:286751600115GO_REF:0000116RHEAGO_REF:0000116
GalmRataldose 1-epimerase activity enablesIBAPANTHER:PTN000009552 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
GalmRatcarbohydrate binding enablesIEAInterPro:IPR011013 and InterPro:IPR0147181600115GO_REF:0000002InterProGO_REF:0000002
GalmRatcatalytic activity enablesIEAInterPro:IPR0110131600115GO_REF:0000002InterProGO_REF:0000002
GalmRatisomerase activity enablesIEAInterPro:IPR008183 more ...1600115GO_REF:0000002InterProGO_REF:0000002
GalmRatisomerase activity enablesIEAUniProtKB-KW:KW-04131600115GO_REF:0000043UniProtGO_REF:0000043
GalmRatprotein homodimerization activity NOT|enablesISOGALM (Homo sapiens)1624291 PMID:12753898RGDPMID:12753898
1 to 9 of 9 rows

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GalmRatgluconeogenesis pathway   IEA 6907045 KEGGrno:00010
GalmRatglycolysis pathway   IEA 6907045 KEGGrno:00010
GalmRatglycolysis/gluconeogenesis pathway  IEA 6907045 KEGGrno:00010

#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
7. Identification and characterisation of human aldose 1-epimerase. Timson DJ and Reece RJ, FEBS Lett 2003 May 22;543(1-3):21-4.
PMID:15489334   PMID:19056867   PMID:23376485  



Galm
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8620,589,775 - 20,641,516 (-)NCBIGRCr8
mRatBN7.2614,837,540 - 14,889,484 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl614,837,548 - 14,889,310 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx615,135,882 - 15,187,744 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0615,458,146 - 15,509,901 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0614,954,424 - 15,006,178 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.062,808,988 - 2,860,742 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl62,808,841 - 2,860,744 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.062,785,889 - 2,837,635 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.463,024,123 - 3,078,720 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.163,024,122 - 3,078,719 (+)NCBI
Celera614,514,739 - 14,566,190 (-)NCBICelera
Cytogenetic Map6q12NCBI
GALM
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38238,666,114 - 38,734,765 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl238,666,081 - 38,741,237 (+)EnsemblGRCh38hg38GRCh38
GRCh37238,893,256 - 38,961,907 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36238,746,743 - 38,815,049 (+)NCBINCBI36Build 36hg18NCBI36
Build 34238,804,889 - 38,873,176NCBI
Celera238,734,098 - 38,802,942 (+)NCBICelera
Cytogenetic Map2p22.1NCBI
HuRef238,632,684 - 38,700,744 (+)NCBIHuRef
CHM1_1238,823,545 - 38,892,563 (+)NCBICHM1_1
T2T-CHM13v2.0238,672,993 - 38,743,547 (+)NCBIT2T-CHM13v2.0
Galm
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391780,434,886 - 80,492,461 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1780,434,900 - 80,492,530 (+)EnsemblGRCm39 Ensembl
GRCm381780,127,458 - 80,185,032 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1780,127,471 - 80,185,101 (+)EnsemblGRCm38mm10GRCm38
MGSCv371780,526,811 - 80,584,372 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361780,035,797 - 80,093,358 (+)NCBIMGSCv36mm8
Celera1784,443,907 - 84,501,487 (+)NCBICelera
Cytogenetic Map17E3NCBI
cM Map1750.46NCBI
Galm
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554416,330,410 - 6,403,219 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554416,330,520 - 6,399,522 (+)NCBIChiLan1.0ChiLan1.0
GALM
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21287,736,071 - 87,810,064 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A87,739,913 - 87,814,044 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A38,697,338 - 38,770,470 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A39,456,786 - 39,527,119 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A39,456,786 - 39,527,116 (+)Ensemblpanpan1.1panPan2
GALM
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11730,741,990 - 30,793,456 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1730,742,127 - 30,792,465 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1730,558,189 - 30,609,682 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01731,397,079 - 31,448,378 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1731,397,221 - 31,447,503 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11730,619,873 - 30,671,292 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01730,689,932 - 30,741,032 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01730,902,711 - 30,953,995 (+)NCBIUU_Cfam_GSD_1.0
LOC101967759
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629241,066,829 - 41,333,563 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493650812,495,438 - 12,502,236 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GALM
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3101,617,526 - 101,753,125 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13101,617,521 - 101,682,821 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23107,762,128 - 107,827,418 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GALM
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11468,647,287 - 68,720,735 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1468,647,297 - 68,720,739 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604543,259,741 - 43,332,630 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Galm
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473820,163,901 - 20,235,256 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473820,164,179 - 20,236,151 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Galm
318 total Variants

Predicted Target Of
Summary Value
Count of predictions:140
Count of miRNA genes:102
Interacting mature miRNAs:130
Transcripts:ENSRNOT00000009221
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 31 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
1549905Stresp10Stress response QTL 106.830.0066stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)6127574569Rat
8693699Alc37Alcohol consumption QTL 372.60.224drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)6796416721301982Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)6134235784Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6141223769Rat
1578758Tcas9Tongue tumor susceptibility QTL 93.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)6137618905Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat

1 to 10 of 31 rows
RH129850  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2614,837,767 - 14,837,966 (-)MAPPERmRatBN7.2
Rnor_6.062,860,316 - 2,860,514NCBIRnor6.0
Rnor_5.062,837,209 - 2,837,407UniSTSRnor5.0
RGSC_v3.463,078,294 - 3,078,492UniSTSRGSC3.4
Celera614,514,967 - 14,515,165UniSTS
Cytogenetic Map6q11UniSTS
AA892666  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2614,838,019 - 14,838,207 (-)MAPPERmRatBN7.2
Rnor_6.062,860,075 - 2,860,262NCBIRnor6.0
Rnor_5.062,836,968 - 2,837,155UniSTSRnor5.0
RGSC_v3.463,078,053 - 3,078,240UniSTSRGSC3.4
Celera614,515,219 - 14,515,406UniSTS
RH 3.4 Map665.3UniSTS
Cytogenetic Map6q11UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000009221   ⟹   ENSRNOP00000009221
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl614,837,548 - 14,889,310 (-)Ensembl
Rnor_6.0 Ensembl62,808,841 - 2,860,744 (+)Ensembl
RefSeq Acc Id: NM_001007704   ⟹   NP_001007705
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,589,775 - 20,641,516 (-)NCBI
mRatBN7.2614,837,540 - 14,889,283 (-)NCBI
Rnor_6.062,808,988 - 2,860,742 (+)NCBI
Rnor_5.062,785,889 - 2,837,635 (+)NCBI
RGSC_v3.463,024,123 - 3,078,720 (+)RGD
Celera614,514,739 - 14,566,190 (-)RGD
Sequence:
RefSeq Acc Id: XM_063261826   ⟹   XP_063117896
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,589,775 - 20,637,915 (-)NCBI
RefSeq Acc Id: XR_005505502
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,593,526 - 20,641,464 (-)NCBI
mRatBN7.2614,841,293 - 14,889,484 (-)NCBI
RefSeq Acc Id: XR_005505503
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,591,826 - 20,641,464 (-)NCBI
mRatBN7.2614,839,589 - 14,889,484 (-)NCBI
Protein RefSeqs NP_001007705 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117896 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH81876 (Get FASTA)   NCBI Sequence Viewer  
  EDM02781 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000009221
  ENSRNOP00000098662
GenBank Protein Q66HG4 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001007705   ⟸   NM_001007704
- UniProtKB: Q66HG4 (UniProtKB/Swiss-Prot),   A6H9S6 (UniProtKB/TrEMBL),   A0A8L2Q447 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000009221   ⟸   ENSRNOT00000009221
RefSeq Acc Id: XP_063117896   ⟸   XM_063261826
- Peptide Label: isoform X1

Name Modeler Protein Id AA Range Protein Structure
AF-Q66HG4-F1-model_v2 AlphaFold Q66HG4 1-342 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13694363
Promoter ID:EPDNEW_R4888
Type:multiple initiation site
Name:Galm_1
Description:galactose mutarotase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.062,808,995 - 2,809,055EPDNEW


1 to 26 of 26 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-38520 BioCyc
Ensembl Genes ENSRNOG00000007023 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000009221 ENTREZGENE
  ENSRNOT00000134334 ENTREZGENE
Gene3D-CATH 2.70.98.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7107751 IMAGE-MGC_LOAD
InterPro Ald1_epimerase_CS UniProtKB/Swiss-Prot
  Aldose_1-epimerase UniProtKB/Swiss-Prot
  Aldose_1/G6P_1-epimerase UniProtKB/Swiss-Prot
  Gal_mutarotase_sf_dom UniProtKB/Swiss-Prot
  Galactose_mutarotase-like UniProtKB/Swiss-Prot
  GH-type_carb-bd UniProtKB/Swiss-Prot
KEGG Report rno:313843 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93738 IMAGE-MGC_LOAD
NCBI Gene 313843 ENTREZGENE
PANTHER ALDOSE-1-EPIMERASE UniProtKB/Swiss-Prot
  GALACTOSE MUTAROTASE UniProtKB/Swiss-Prot
Pfam Aldose_epim UniProtKB/Swiss-Prot
PhenoGen Galm PhenoGen
PIRSF GALM UniProtKB/Swiss-Prot
PROSITE ALDOSE_1_EPIMERASE UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000007023 RatGTEx
Superfamily-SCOP SSF74650 UniProtKB/Swiss-Prot
UniProt A0A8L2Q447 ENTREZGENE, UniProtKB/TrEMBL
  A6H9S6 ENTREZGENE, UniProtKB/TrEMBL
  GALM_RAT UniProtKB/Swiss-Prot, ENTREZGENE
1 to 26 of 26 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-06-01 Galm  galactose mutarotase  Galm  galactose mutarotase (aldose 1-epimerase)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-10-17 Galm  galactose mutarotase (aldose 1-epimerase)  Galm  galactose mutarotase  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-11-17 Galm  galactose mutarotase      Name updated 1299863 APPROVED
2005-07-29 Galm  galactose mutarotase (aldose 1-epimerase)      Symbol and Name status set to provisional 70820 PROVISIONAL

Note Type Note Reference
gene_other human homolog shows a preference for galactose over glucose 1556538