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Gene: Ubald1 (UBA-like domain containing 1) Rattus norvegicus

Analyze

Symbol:

Ubald1

Name:

UBA-like domain containing 1

RGD ID:

1359443

Description:

Orthologous to human UBALD1 (UBA like domain containing 1); INTERACTS WITH 4,4'-sulfonyldiphenol; alpha-Zearalanol; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Fam100a; family with sequence similarity 100, member A; hypothetical LOC302941; hypothetical protein LOC302941; LOC100910875; MGC95014; protein FAM100A-like; RGD1359443; UBA-like domain-containing protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	11,202,197 - 11,206,962 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	11,202,155 - 11,207,787 (+)	Ensembl				GRCr8
mRatBN7.2	10	10,695,754 - 10,700,519 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	10,695,717 - 10,700,518 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	15,404,064 - 15,408,828 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	14,892,882 - 14,897,646 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	10,562,313 - 10,567,076 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	10,889,435 - 10,894,200 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	11,338,306 - 11,343,070 (+)	Ensembl			rn6	Rnor6.0
Rnor_6.0 Ensembl	10	10,889,488 - 10,893,467 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	9,656,365 - 9,661,130 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	10,813,341 - 10,818,106 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	9,659,952 - 9,664,717 (+)	NCBI		Celera
RGSC_v3.1	10	10,813,340 - 10,818,105 (+)	NCBI
Cytogenetic Map	10	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Rubinstein-Taybi syndrome (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

2-hydroxypropanoic acid (ISO)

4,4'-sulfonyldiphenol (EXP)

acrolein (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

alpha-Zearalanol (EXP)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP)

buta-1,3-diene (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

chlorpyrifos (ISO)

copper(II) chloride (ISO)

cyclosporin A (ISO)

dibutyl phthalate (ISO)

dicrotophos (ISO)

dimethyl sulfoxide (ISO)

ethanol (ISO)

flutamide (EXP)

folic acid (ISO)

furan (EXP)

gentamycin (EXP)

GSK-J4 (ISO)

nitrates (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

perfluorooctanoic acid (EXP)

phenobarbital (EXP)

pregnenolone 16alpha-carbonitrile (EXP)

rac-lactic acid (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

tetrachloromethane (EXP,ISO)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

triphenyl phosphate (ISO)

tungsten (ISO)

urethane (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
2.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:15489334

Genomics

Comparative Map Data

Ubald1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	11,202,197 - 11,206,962 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	11,202,155 - 11,207,787 (+)	Ensembl				GRCr8
mRatBN7.2	10	10,695,754 - 10,700,519 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	10,695,717 - 10,700,518 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	15,404,064 - 15,408,828 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	14,892,882 - 14,897,646 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	10,562,313 - 10,567,076 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	10,889,435 - 10,894,200 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	11,338,306 - 11,343,070 (+)	Ensembl			rn6	Rnor6.0
Rnor_6.0 Ensembl	10	10,889,488 - 10,893,467 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	9,656,365 - 9,661,130 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	10,813,341 - 10,818,106 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	9,659,952 - 9,664,717 (+)	NCBI		Celera
RGSC_v3.1	10	10,813,340 - 10,818,105 (+)	NCBI
Cytogenetic Map	10	q12	NCBI

UBALD1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	4,608,884 - 4,614,888 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	4,608,883 - 4,615,027 (-)	Ensembl			hg38	GRCh38
GRCh37	16	4,658,885 - 4,664,889 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	4,598,885 - 4,604,928 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	16	4,867,738 - 4,873,782 (-)	NCBI		Celera
Cytogenetic Map	16	p13.3	NCBI
HuRef	16	4,625,871 - 4,631,914 (-)	NCBI		HuRef
CHM1_1	16	4,658,944 - 4,664,977 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	16	4,638,343 - 4,644,336 (-)	NCBI		T2T-CHM13v2.0

Ubald1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	4,692,641 - 4,698,190 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	4,692,642 - 4,698,179 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	16	4,874,779 - 4,880,320 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	4,874,778 - 4,880,315 (-)	Ensembl			mm10	GRCm38
MGSCv37	16	4,874,779 - 4,879,851 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	16	4,790,005 - 4,795,543 (-)	NCBI		MGSCv36	mm8
Celera	16	5,506,154 - 5,511,226 (-)	NCBI		Celera
Cytogenetic Map	16	A1	NCBI
cM Map	16	2.48	NCBI

Ubald1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955442	12,828,567 - 12,834,355 (+)	Ensembl
ChiLan1.0	NW_004955442	12,828,567 - 12,834,355 (+)	NCBI	ChiLan1.0	ChiLan1.0

UBALD1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	5,138,468 - 5,145,757 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	8,928,892 - 8,936,182 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	3,534,422 - 3,540,533 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	4,702,218 - 4,708,892 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2

UBALD1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	36,783,875 - 36,794,526 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	36,786,762 - 36,787,452 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	38,110,536 - 38,127,080 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	36,985,911 - 37,002,468 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	36,985,156 - 36,997,268 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	36,780,418 - 36,796,963 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	36,673,498 - 36,677,892 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	37,075,330 - 37,091,893 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ubald1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	106,796,417 - 106,801,758 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936530	4,638,114 - 4,647,921 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936530	4,641,859 - 4,647,264 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

UBALD1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	37,753,280 - 37,758,870 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	3	37,753,262 - 37,758,872 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	38,811,946 - 38,817,700 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

UBALD1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	4,295,504 - 4,301,647 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	4,292,771 - 4,301,515 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666068	26,373,187 - 26,379,327 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ubald1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624824	2,409,845 - 2,415,211 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ubald1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	9	17,023,735 - 17,029,109 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ubald1
37 total Variants

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2313095	Bss62	Bone structure and strength QTL 62	1.5	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	10	5893811	50893811	Rat
631660	Hcar1	Hepatocarcinoma resistance QTL 1	3.4	0.0001	liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	10	6661118	35509383	Rat
8662860	Vetf10	Vascular elastic tissue fragility QTL 10			artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	10	6660923	73950353	Rat
2313066	Bss63	Bone structure and strength QTL 63	1.4	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	10	5893811	50893811	Rat
631554	Bp133	Blood pressure QTL 133		0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	1250554	64349221	Rat
2313064	Bmd71	Bone mineral density QTL 71	0.9	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	10	5893811	50893811	Rat
1578761	Stresp21	Stress response QTL 21	3.3		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	10	6877142	51877142	Rat
2293680	Bss40	Bone structure and strength QTL 40	5.66	0.0001	femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	10	1	35730538	Rat
7387235	Uae41	Urinary albumin excretion QTL 41	5.26	0.1874	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	10	1	30004247	Rat
2313104	Bss61	Bone structure and strength QTL 61	0.9	0.0001	tibia area (VT:1000281)	tibia midshaft cross-sectional area (CMO:0001717)	10	5893811	50893811	Rat
61427	Cia16	Collagen induced arthritis QTL 16	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	6864618	96620484	Rat
10401803	Kidm50	Kidney mass QTL 50			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	10	922197	45922197	Rat
2317754	Glom25	Glomerulus QTL 25	3.5		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	10	2103708	47103708	Rat
2313081	Bss64	Bone structure and strength QTL 64	1.3	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	10	5893811	50893811	Rat
631828	Alc5	Alcohol consumption QTL 5	2.4		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	10	1	17749933	Rat
634327	Hc4	Hypercalciuria QTL 4	2.4		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	10	1	38832698	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
19	1	30	112	68	60	36	79	36	12	254	143	11	87	56	70	24	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001007668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC079459	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ214502	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228825	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000033695 ⟹ ENSRNOP00000033223

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	11,202,155 - 11,207,787 (+)	Ensembl
mRatBN7.2 Ensembl	10	10,695,717 - 10,700,518 (+)	Ensembl
Rnor_6.0 Ensembl	10	11,338,306 - 11,343,070 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000071746 ⟹ ENSRNOP00000067419

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	10	10,889,488 - 10,893,467 (+)	Ensembl

RefSeq Acc Id:

NM_001007668 ⟹ NP_001007669

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	11,202,197 - 11,206,962 (+)	NCBI
mRatBN7.2	10	10,695,754 - 10,700,519 (+)	NCBI
Rnor_6.0	10	10,889,435 - 10,894,200 (+)	NCBI
Rnor_5.0	10	9,656,365 - 9,661,130 (+)	NCBI
RGSC_v3.4	10	10,813,341 - 10,818,106 (+)	RGD
Celera	10	9,659,952 - 9,664,717 (+)	RGD

Sequence:

show sequence

GGACGCGTGAGGCTAGCGCGCAGGGAGGCCGGAGCGGGCTGCGCGGCGGCGCCATGTCCGTGAA
CATGGACGAGCTCAAACACCAGGTCATGATCAACCAGTTCGTGCTGACGGCGGGCTGTGCGGCC
GACCAGGCGAAGCAACTGCTGCAGGCGGCCCACTGGCAGTTCGAGACAGCCCTCAGCGCCTTTT
TCCAGGAGACCAACATCCCCTACAGCCACCACCACCAGATGATGTGCACTCCCGCCAACACCCC
TGCCACGCCCCCCAACTTCCCTGATGCCCTCACCATGTTCTCCCGTCTCAAGGCCTCTGAAAGC
TTCCACAGTGGTGGCAGCAGCGGCAGCCCAATGGCCACGTCGGCCACGTCACCCCCACCGCACT
TCCCCCATGCCACTGGCAGCTTTGCAACACCCAGCTGGCCAACTGCAGCCTCGCCCCCAGGAGG
CCCACAGCACCTCCAGCCGCAGCCGCCCCTGTGGACTCCGGCACCCCCTTCCCCGACTTCAGAC
TGGCCTCCCCTGGCTCCCCAACAGGCCACCTCAGAACCAAGGGCCCACCCTGCCATGGAGGCAG
AGAGATAAGGGAGGCCCCTCCCCCCTCCCGGAGGCCAGAACCCCGTGGGGTGGGGGAGAGGATG
TCTCCGTGGGCCCCTTCACCCCTCCTCTGTCTGCACCCCTAAACCCCAGAGCCCTGGAGGGGAG
AGACTGGACTCTAGCCAGGCAGTCTTGTGCCAGCACTCAGCTGCACGCACGCACGCAAGTTCAC
AGCACAGGCACCCCCAGCTCGCATGGATCTGACTCAAAGTGGCTTGGGTGCCTAGTGGGCAGCA
CCTTGGAGACCAAGCAGCCATCCCAACGAAGACTTACCTGCCTGGCCCCACCACCTGGAGTGTT
TCAGAGAATCACTTGGTGGCAGACACATGATGACTCCTGTCTTGGGGCCAGTAGGCCTAGATCC
CTACCCTTGGGAATGCAGAGCCTTCTCCGCATGTGTGCGTGTAGCTGTGTCTTATGTATTTATA
CGTATGTCGCTCTTCAAAAGCAACCTAGTTTATGGGGCAGCTGGACTTTGCATGTTAGAGTGAG
CCCCAAGCCCCTTGGCCCGCCACCCTGTTGTTTGAAGGGCCCTGCCTCACTCCACCTCCTTATC
TGCCAGCATTGCTGTTTCCTGCGAAGGATTATGGGAAACTCCAGGACTCTTCTACCCAGCCCCT
GCCTGCAAGGGTTCCCTGCATGCCTGTTTCCCAGAGCCCAGGGGTACCTGGTCCCCATTTCCTA
CCCCTCTTTTAACAAAAGAGAAAAGAATTCCAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001007669	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH79459	(Get FASTA)	NCBI Sequence Viewer
	EDL96279	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000033223
	ENSRNOP00000033223.3
GenBank Protein	Q6AXN0	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001007669 ⟸ NM_001007668
- UniProtKB:	Q6AXN0 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MSVNMDELKHQVMINQFVLTAGCAADQAKQLLQAAHWQFETALSAFFQETNIPYSHHHQMMCTP ANTPATPPNFPDALTMFSRLKASESFHSGGSSGSPMATSATSPPPHFPHATGSFATPSWPTAAS PPGGPQHLQPQPPLWTPAPPSPTSDWPPLAPQQATSEPRAHPAMEAER hide sequence

Ensembl Acc Id:

ENSRNOP00000067419 ⟸ ENSRNOT00000071746

Ensembl Acc Id:

ENSRNOP00000033223 ⟸ ENSRNOT00000033695

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6AXN0-F1-model_v2	AlphaFold	Q6AXN0	1-176	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1359443	AgrOrtholog
BioCyc Gene	G2FUF-26043	BioCyc
Ensembl Genes	ENSRNOG00000027368	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOG00000046295	Ensembl
Ensembl Transcript	ENSRNOT00000033695	ENTREZGENE
	ENSRNOT00000033695.6	UniProtKB/Swiss-Prot
Gene3D-CATH	DNA helicase RuvA subunit, C-terminal domain	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7121902	IMAGE-MGC_LOAD
InterPro	UBA-like_sf	UniProtKB/Swiss-Prot
	UBA_8	UniProtKB/Swiss-Prot
	UBALD1/2	UniProtKB/Swiss-Prot
KEGG Report	rno:302941	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:95014	IMAGE-MGC_LOAD
NCBI Gene	302941	ENTREZGENE
PANTHER	PTHR31993	UniProtKB/Swiss-Prot
	UBA-LIKE DOMAIN-CONTAINING PROTEIN 1	UniProtKB/Swiss-Prot
Pfam	UBA_8	UniProtKB/Swiss-Prot
PhenoGen	Ubald1	PhenoGen
RatGTEx	ENSRNOG00000027368	RatGTEx
	ENSRNOG00000046295	RatGTEx
Superfamily-SCOP	SSF46934	UniProtKB/Swiss-Prot
UniProt	Q6AXN0	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Ubald1	UBA-like domain containing 1	LOC100910875	protein FAM100A-like	Data merged from RGD:6496445	737654	PROVISIONAL
2012-12-10	Ubald1	UBA-like domain containing 1	Fam100a	family with sequence similarity 100, member A	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-07-05	LOC100910875	protein FAM100A-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-03-07	Fam100a	family with sequence similarity 100, member A	RGD1359443	hypothetical LOC302941	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-30	RGD1359443	hypothetical LOC302941	MGC95014		Symbol updated	1299863	APPROVED
2005-07-29	MGC95014	hypothetical LOC302941			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar