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Gene: Ndrg3 (NDRG family member 3) Rattus norvegicus

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Symbol:

Ndrg3 (Ensembl: LOC120101770)

Name:

NDRG family member 3 (Ensembl:protein NDRG3-like)

RGD ID:

1359424

Description:

Predicted to be involved in decidualization and signal transduction. Predicted to be active in cytoplasm. Orthologous to human NDRG3 (NDRG family member 3); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC296318; N-myc downstream regulated 3; N-myc downstream regulated gene 3; N-myc downstream regulated gene 3-like; N-myc downstream-regulated gene 3 protein; similar to Ndr3 protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NDRG3 (NDRG family member 3)	RGD	RGD
Mus musculus (house mouse):	Ndrg3 (N-myc downstream regulated gene 3)	RGD	RGD
Chinchilla lanigera (long-tailed chinchilla):	Ndrg3 (NDRG family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NDRG3 (NDRG family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NDRG3 (NDRG family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ndrg3 (NDRG family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NDRG3 (NDRG family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NDRG3 (NDRG family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ndrg3 (NDRG family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Ndrg3 (NDRG family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ST8SIA3 (ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	NDRG3 (NDRG family member 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	NDRG3 (NDRG family member 3)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Ndrg3 (N-myc downstream regulated gene 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Ndrg3 (N-myc downstream regulated gene 3)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ndrg3a (ndrg family member 3a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	ndrg3a (ndrg family member 3a)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ndrg3b (ndrg family member 3b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ndrg3b (ndrg family member 3b)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG2082	Alliance	DIOPT (Ensembl Compara\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ZK1073.1	Alliance	DIOPT (Ensembl Compara\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	Y48G10A.3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	Y48G10A.3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	MESK2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ndrg3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ndrg3	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	166,007,556 - 166,070,981 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	165,890,091 - 166,049,887 (-)	Ensembl				GRCr8
mRatBN7.2	3	145,587,505 - 145,650,896 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	145,508,997 - 145,532,381 (-)	Ensembl				mRatBN7.2
mRatBN7.2 Ensembl	3	145,548,041 - 145,650,873 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	149,412,925 - 149,476,219 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	157,911,426 - 157,974,699 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	155,651,319 - 155,714,472 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	152,972,055 - 153,099,089 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	3	158,631,322 - 158,659,477 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	147,454,138 - 147,571,926 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	144,316,668 - 144,358,980 (-)	NCBI		Celera
RGSC_v3.1	3	147,307,929 - 147,477,835 (-)	NCBI
Cytogenetic Map	3	q42	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

1-chloro-2,4-dinitrobenzene (ISO)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-methylcholine (ISO)

4,4'-diaminodiphenylmethane (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

actinomycin D (ISO)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

bortezomib (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

cisplatin (ISO)

cobalt dichloride (ISO)

coumarin (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

diarsenic trioxide (ISO)

Dibutyl phosphate (ISO)

dimethyl sulfoxide (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

enzyme inhibitor (ISO)

ethanol (ISO)

formaldehyde (ISO)

FR900359 (ISO)

fulvestrant (ISO)

genistein (EXP)

glyphosate (EXP)

ivermectin (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

mercury dichloride (ISO)

methamphetamine (ISO)

methylmercury chloride (ISO)

Nutlin-3 (ISO)

okadaic acid (ISO)

paracetamol (EXP,ISO)

pirinixic acid (EXP)

potassium dichromate (ISO)

rotenone (EXP)

SB 431542 (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

Soman (EXP)

sulforaphane (ISO)

sunitinib (ISO)

temozolomide (ISO)

tert-butyl hydroperoxide (ISO)

tetrachloromethane (EXP,ISO)

triptonide (ISO)

troglitazone (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

decidualization (ISO)

signal transduction (IBA)

Cellular Component

cytoplasm (IBA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
4.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:11936845	PMID:19056867	PMID:27812761	PMID:33247804

Genomics

Comparative Map Data

Ndrg3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	166,007,556 - 166,070,981 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	165,890,091 - 166,049,887 (-)	Ensembl				GRCr8
mRatBN7.2	3	145,587,505 - 145,650,896 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	145,508,997 - 145,532,381 (-)	Ensembl				mRatBN7.2
mRatBN7.2 Ensembl	3	145,548,041 - 145,650,873 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	149,412,925 - 149,476,219 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	157,911,426 - 157,974,699 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	155,651,319 - 155,714,472 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	152,972,055 - 153,099,089 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	3	158,631,322 - 158,659,477 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	147,454,138 - 147,571,926 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	144,316,668 - 144,358,980 (-)	NCBI		Celera
RGSC_v3.1	3	147,307,929 - 147,477,835 (-)	NCBI
Cytogenetic Map	3	q42	NCBI

NDRG3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	36,651,771 - 36,746,090 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	36,651,766 - 36,746,128 (-)	Ensembl			hg38	GRCh38
GRCh37	20	35,280,174 - 35,374,493 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	34,713,583 - 34,807,895 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	20	34,713,582 - 34,807,895	NCBI
Celera	20	31,987,719 - 32,081,988 (-)	NCBI		Celera
Cytogenetic Map	20	q11.23	NCBI
HuRef	20	32,016,200 - 32,111,174 (-)	NCBI		HuRef
CHM1_1	20	35,182,002 - 35,276,298 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	20	38,376,108 - 38,470,363 (-)	NCBI		T2T-CHM13v2.0

Ndrg3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	156,769,262 - 156,834,052 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	156,769,265 - 156,833,976 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	156,927,342 - 156,992,132 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	156,927,345 - 156,992,056 (-)	Ensembl			mm10	GRCm38
MGSCv37	2	156,753,078 - 156,817,847 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	156,618,786 - 156,661,584 (-)	NCBI		MGSCv36	mm8
Celera	2	162,863,371 - 162,927,900 (-)	NCBI		Celera
Cytogenetic Map	2	H1	NCBI
cM Map	2	77.89	NCBI

Ndrg3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	24,901,976 - 24,972,033 (+)	Ensembl
ChiLan1.0	NW_004955422	24,901,975 - 24,972,033 (+)	NCBI	ChiLan1.0	ChiLan1.0

NDRG3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	42,388,819 - 42,482,470 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	42,381,919 - 42,475,565 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	32,983,709 - 33,077,582 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	34,103,898 - 34,172,830 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	34,103,898 - 34,172,830 (-)	Ensembl			panPan2	panpan1.1

NDRG3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	25,429,987 - 25,504,639 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	25,431,312 - 25,486,468 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	25,075,377 - 25,150,144 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	26,127,266 - 26,202,078 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	26,127,286 - 26,201,826 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	25,405,666 - 25,480,249 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	25,504,885 - 25,580,017 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	25,995,357 - 26,069,862 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ndrg3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	174,347,658 - 174,409,031 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936561	4,340,452 - 4,401,864 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936561	4,340,518 - 4,401,826 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NDRG3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	39,905,958 - 39,969,659 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	17	39,905,957 - 39,987,754 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	45,359,910 - 45,427,415 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NDRG3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Vero_WHO_p1.0	NW_023666054	615,209 - 660,526 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ndrg3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624842	2,786,992 - 2,849,901 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624842	2,767,359 - 2,848,637 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ndrg3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	136,266,784 - 136,329,042 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ndrg3
480 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	245
Count of miRNA genes:	175
Interacting mature miRNAs:	196
Transcripts:	ENSRNOT00000000015, ENSRNOT00000055232
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2301411	Bp320	Blood pressure QTL 320		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	141555229	186555229	Rat
12879876	Bw182	Body weight QTL 182		0.003	body mass (VT:0001259)	body weight (CMO:0000012)	3	141555229	186555229	Rat
1582233	Insul10	Insulin level QTL 10	5.4	0.0015	blood insulin amount (VT:0001560)	serum insulin level times blood glucose level (CMO:0002040)	3	133259579	178259579	Rat
12879872	Cm97	Cardiac mass QTL 97		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	141555229	186555229	Rat
1578653	Vnigr3	Vascular neointimal growth QTL 3	3.1		artery morphology trait (VT:0002191)	artery neointimal hyperplastic lesion area (CMO:0001414)	3	151075912	189428310	Rat
12879873	Cm96	Cardiac mass QTL 96		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	3	141555229	186555229	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	129154923	182114333	Rat
12879874	Cm98	Cardiac mass QTL 98		0.005	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	3	141555229	186555229	Rat
1298068	Bp167	Blood pressure QTL 167		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	161492708	189428310	Rat
12879875	Kidm64	Kidney mass QTL 64		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	141555229	186555229	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	67641776	167835660	Rat
61335	Bp20	Blood pressure QTL 20	3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	161799493	176036425	Rat
1331726	Bp208	Blood pressure QTL 208	3.129		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	161799270	187311134	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	133134628	178134628	Rat
1582213	Insul6	Insulin level QTL 6	3.7	0.0009	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
1300173	Rf11	Renal function QTL 11	3.38		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	141508991	166376254	Rat
9589106	Insul23	Insulin level QTL 23	13.86	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	3	152055202	189428310	Rat
10755461	Coatc16	Coat color QTL 16			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	3	142898802	187898802	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	79649560	177741895	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	145335553	189428310	Rat
2303620	Vencon4	Ventilatory control QTL 4	3.9		respiration trait (VT:0001943)	tidal volume (CMO:0000222)	3	125116475	170116475	Rat
1582256	Insul9	Insulin level QTL 9	4.4	0.0016	blood insulin amount (VT:0001560)	absolute change in serum insulin level (CMO:0002038)	3	155759447	189428310	Rat
1576306	Schws3	Schwannoma susceptibility QTL 3		0.001	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	3	139299381	184299381	Rat
1300159	Kidm4	Kidney mass QTL 4	3.83		kidney mass (VT:0002707)	right kidney wet weight to body weight ratio (CMO:0001953)	3	141508991	177728348	Rat
5686842	Rf59	Renal function QTL 59			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	3	122395989	167395989	Rat
631673	Iddm13	Insulin dependent diabetes mellitus QTL 13	1.3	0.663	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	3	137114333	182114333	Rat
1582248	Insul7	Insulin level QTL 7	3.9	0.0041	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	131036586	176036586	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	131036586	176036586	Rat
1581546	Pur13	Proteinuria QTL 13	2.93	0.0335	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	3	98651826	167012663	Rat
1578666	Vnigr1	Vascular neointimal growth QTL 1	4.6		artery morphology trait (VT:0002191)	artery lumen area (CMO:0001409)	3	151075912	189428310	Rat
1578656	Vnigr2	Vascular neointimal growth QTL 2	4.2		artery morphology trait (VT:0002191)	lesioned artery residual lumen area (CMO:0001417)	3	151075912	189428310	Rat
12879871	Am7	Aortic mass QTL 7		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	3	141555229	186555229	Rat
631541	Bp81	Blood pressure QTL 81	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	144575244	189428310	Rat
2293087	Iddm27	Insulin dependent diabetes mellitus QTL 27	2.68		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	160357340	167835660	Rat

Markers in Region

RH127348

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	145,548,184 - 145,548,400 (+)	MAPPER	mRatBN7.2
mRatBN7.2	3	145,509,148 - 145,509,364 (+)	MAPPER	mRatBN7.2
mRatBN7.2	3	145,431,188 - 145,431,404 (+)	MAPPER	mRatBN7.2
mRatBN7.2	3	145,470,156 - 145,470,370 (+)	MAPPER	mRatBN7.2
mRatBN7.2	3	145,587,657 - 145,587,873 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	152,972,208 - 152,972,423	NCBI	Rnor6.0
Rnor_5.0	3	158,725,024 - 158,725,239	UniSTS	Rnor5.0
RGSC_v3.4	3	147,402,173 - 147,402,388	UniSTS	RGSC3.4
RGSC_v3.4	3	147,454,243 - 147,454,458	UniSTS	RGSC3.4
RH 3.4 Map	3	1329.0	UniSTS
Cytogenetic Map	3	q42	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	hemolymphoid system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	sensory system	visual system
7	18	48	67	136	94	9	47	35	32	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001013923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104617	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104620	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104623	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283378	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283379	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283380	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283381	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283382	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283383	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283384	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283385	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010064592	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC078946	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000055232 ⟹ ENSRNOP00000052106

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	145,549,391 - 145,650,873 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000103585 ⟹ ENSRNOP00000087669

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	145,548,041 - 145,650,873 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000106731 ⟹ ENSRNOP00000089773

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	145,548,041 - 145,572,223 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109829 ⟹ ENSRNOP00000086721

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	145,587,505 - 145,650,829 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000115244 ⟹ ENSRNOP00000093170

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	145,548,041 - 145,571,860 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118753 ⟹ ENSRNOP00000083574

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	145,587,505 - 145,650,829 (-)	Ensembl

RefSeq Acc Id:

NM_001013923 ⟹ NP_001013945

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	166,007,556 - 166,070,911 (-)	NCBI
mRatBN7.2	3	145,587,505 - 145,650,873 (-)	NCBI
Rnor_6.0	3	152,972,055 - 153,099,089 (-)	NCBI
RGSC_v3.4	3	147,454,138 - 147,571,926 (-)	RGD
Celera	3	144,316,668 - 144,358,980 (-)	NCBI

Sequence:

show sequence

CGGCCCGCGCTAGAGCTTCAGAGAACCGGTTTACTTTTGAGACCTGACTACTCTGAGCCGACCT
CATGGATGAACTTCAGGATGTTCAGCTCACAGAGATCAAACCACTCCTGAATGATAAGAATGGC
ACACGAAACTTCCAGGACTTTGACTGTCAGGAACATGACATTGAAACACCCCATGGTATGGTCC
ACGTCACCATAAGAGGCTTACCAAAAGGAAACAGACCTGTTATCCTGACATACCATGACATTGG
GCTCAACCATAAATCCTGCTTCAACACGTTCTTCAACTTTGAGGATATGCAAGAGATCACCCAG
CACTTTGCTGTCTGTCACGTGGATGCCCCAGGCCAACAGGAAGCAGCACCCTCCTTCCCAACAG
GGTATCAGTACCCCACCATGGATGAGCTGGCTGAGATGCTGCCTCCCGTTCTTACACACCTGAG
TATGAAGAGCATCATTGGCATTGGAGTTGGAGCAGGAGCCTACATCCTCAGCAGATTTGCACTC
AATCATCCAGAGCTGGTAGAAGGTCTTGTGCTCATTAACATTGACCCGTGTGCTAAAGGCTGGA
TTGACTGGGCAGCTTCCAAACTCTCCGGCTTGACCACCAACGTCGTGGACATAATTTTGGCTCA
TCACTTCGGGCAGGAGGAGTTGCAGGCCAATTTGGACCTCATTCAAACATACAGACTGCACATT
GCTCAAGATATCAATCAAGAAAATCTCCAGCTCTTCCTGGGTTCCTATAATGGACGCAGAGACC
TGGAGATCGAAAGACCTATTCTGGGCCAAAATGATAACAGATTGAAAACATTAAAGTGTTCTAC
TTTACTGGTGGTTGGGGACAATTCACCTGCTGTGGAAGCTGTGGTTGAATGTAATTCTCGCCTC
GACCCTATAAATACAACTTTGCTAAAGATGGCAGACTGTGGAGGACTGCCCCAAGTAGTTCAGC
CTGGGAAGCTCACCGAGGCCTTCAAGTACTTTTTGCAGGGAATGGGCTACATACCATCTGCCAG
CATGACCCGGCTCGCCCGATCACGAACCCACTCCACCTCAAGTAGCATTGGCTCTGGAGAAAGT
CCCTTCAGCAGGTCTGTGACCAGCAATCAGTCAGATGGAACTCAAGAATCCTGTGAGTCCCCTG
ATGTCCTGGACAGACACCAGACCATGGAAGTGTCTTGCTAAGCAGATGCTCCTCCCCTGGACCA
TGCAAGTCCCTCCTCCTTGAAATGACCACTCCATAATAGAACATTTCATTCCGTCAGCTGGCCT
CCACTTTCTTTCACTCATGCATGGCCACAGCATCTCTCTCTAGTAGGCTGGATTATCATTCTCT
CTGCCCTTTTGTATGTACCGAGAACCACACCCATGCCATTACTGTAACATTCCAACACCTTGAT
CTGATCCGATCTCCATATCTTCTCTTGCCAGCCTTTCCCTGCGCTCCCTCAAATATGTATCTGA
CGAGACTCTTTAATTCCCAACTCCATGTGTGTGCGAGCACGCGTGTCTGTGTCTGTGTGTGCAT
AGTTCTGTGATTTTAGACATGCTTTCTTGTAGTGCTTCTGCAAAGGGACTTTTTTGAATTCTCA
GTGGCATTTTTAAGGGAAATATGCAGAGTGGATATCTGGGTGGGATAGGCCACAAGATTGGATT
TTGGTTCCACTTGGACAACTAACAATATTTGTAGAGTGATTTCAGGAGAGAGCAGGTCTGAGGA
ATATGTGAGGCTATAGTTACTGTGTGGGCCACTGGTGAGGTAACGATTACACAGATAGGCAGGC
AGGGTGGCAGTCACCTCCCCTGTCCACGTGGATTCATACCTGTCATCGTGTAAGTCAGAGGGAG
GGATCTGAAGCCTGTGAGTGATGTCTGGTACACTGTGGAGTTTTCTCCAGAGAAGTGGCCTAAG
CCCTCGGTTAGCCGAGAAAGATGGAAAGCAAAGCGCCAGGCTTCGCTCTACAGAGAGAAAGTGC
TGTCCCTGAAGCATCTGAGTCCACTTACCAGACACCCAGGCATCAGCAGGAAGTGCCTCCTGGT
CTGAGGGAGAGCGGTTCTCCATCCCTCGGTCCCAGAGAACAGAGTGATATTTGAAAATGCCATC
GATGGTGAGGGTTTTATTGGGGAAGAGGAAGGACCGTTAGCACACACCATCATGGTAAATAAGT
GGAGCCTAAGTGTCAGCAGACATGATGAAAGCCAAGTCACCTTGAAGGTGACTTTTCTGGGAAG
GTCTTAAGCATGTAATGTCCCTTAATAGGAGGGAAAGGGACAATCTCAGGGCAGCCTTGTCCAG
GTAGAAATATTTTGCCCCCCTGTCTGTTGTTGGTGAGGGGTCACACCAGCCAGGGAGACCCTCT
GGGAAGAAGCTGCCACACACAAGGACTCTGGAAGGATCCACATGTGAGCCCAGCCAGGGTCATA
CGGTTCCCAACCTGAGGAAAAGGTTTTTCACACACTCCTTGCTTTCTGCTGAGATAAGAAAGGT
GTCACTCTGCAGAGTGTGACTTTTTACAGGTTAAATAAAGCTGTATATGTCTCATTGTTAAAAA
AAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039104617 ⟹ XP_038960545

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	166,007,556 - 166,070,980 (-)	NCBI
mRatBN7.2	3	145,587,505 - 145,650,896 (-)	NCBI

RefSeq Acc Id:

XM_039104620 ⟹ XP_038960548

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	166,007,556 - 166,070,981 (-)	NCBI
mRatBN7.2	3	145,587,505 - 145,650,896 (-)	NCBI

RefSeq Acc Id:

XM_039104623 ⟹ XP_038960551

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	166,009,076 - 166,070,981 (-)	NCBI
mRatBN7.2	3	145,589,082 - 145,650,896 (-)	NCBI

RefSeq Acc Id:

XM_063283377 ⟹ XP_063139447

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	166,007,556 - 166,070,981 (-)	NCBI

RefSeq Acc Id:

XM_063283378 ⟹ XP_063139448

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	166,007,556 - 166,052,876 (-)	NCBI

RefSeq Acc Id:

XM_063283379 ⟹ XP_063139449

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	166,007,556 - 166,034,236 (-)	NCBI

RefSeq Acc Id:

XM_063283380 ⟹ XP_063139450

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	166,007,556 - 166,070,981 (-)	NCBI

RefSeq Acc Id:

XM_063283381 ⟹ XP_063139451

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	166,007,556 - 166,052,934 (-)	NCBI

RefSeq Acc Id:

XM_063283382 ⟹ XP_063139452

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	166,007,556 - 166,052,936 (-)	NCBI

RefSeq Acc Id:

XM_063283383 ⟹ XP_063139453

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	166,007,556 - 166,034,167 (-)	NCBI

RefSeq Acc Id:

XM_063283384 ⟹ XP_063139454

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	166,007,556 - 166,070,981 (-)	NCBI

RefSeq Acc Id:

XM_063283385 ⟹ XP_063139455

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	166,007,556 - 166,034,167 (-)	NCBI

RefSeq Acc Id:

XR_010064592

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	166,011,674 - 166,070,981 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001013945	(Get FASTA)	NCBI Sequence Viewer
	XP_038960545	(Get FASTA)	NCBI Sequence Viewer
	XP_038960548	(Get FASTA)	NCBI Sequence Viewer
	XP_038960551	(Get FASTA)	NCBI Sequence Viewer
	XP_063139447	(Get FASTA)	NCBI Sequence Viewer
	XP_063139448	(Get FASTA)	NCBI Sequence Viewer
	XP_063139449	(Get FASTA)	NCBI Sequence Viewer
	XP_063139450	(Get FASTA)	NCBI Sequence Viewer
	XP_063139451	(Get FASTA)	NCBI Sequence Viewer
	XP_063139452	(Get FASTA)	NCBI Sequence Viewer
	XP_063139453	(Get FASTA)	NCBI Sequence Viewer
	XP_063139454	(Get FASTA)	NCBI Sequence Viewer
	XP_063139455	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH78946	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000052106
	ENSRNOP00000086721
	ENSRNOP00000086721.1
	ENSRNOP00000087669.1
GenBank Protein	Q6AYR2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001013945 ⟸ NM_001013923

- UniProtKB:

Q6AYR2 (UniProtKB/Swiss-Prot), A0A8I6ASR6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDELQDVQLTEIKPLLNDKNGTRNFQDFDCQEHDIETPHGMVHVTIRGLPKGNRPVILTYHDIG
LNHKSCFNTFFNFEDMQEITQHFAVCHVDAPGQQEAAPSFPTGYQYPTMDELAEMLPPVLTHLS
MKSIIGIGVGAGAYILSRFALNHPELVEGLVLINIDPCAKGWIDWAASKLSGLTTNVVDIILAH
HFGQEELQANLDLIQTYRLHIAQDINQENLQLFLGSYNGRRDLEIERPILGQNDNRLKTLKCST
LLVVGDNSPAVEAVVECNSRLDPINTTLLKMADCGGLPQVVQPGKLTEAFKYFLQGMGYIPSAS
MTRLARSRTHSTSSSIGSGESPFSRSVTSNQSDGTQESCESPDVLDRHQTMEVSC

hide sequence

RefSeq Acc Id:	XP_038960548 ⟸ XM_039104620
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6ASR6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960545 ⟸ XM_039104617
- Peptide Label:	isoform X4
- UniProtKB:	D4ACZ5 (UniProtKB/TrEMBL), A0A8I6ASR6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960551 ⟸ XM_039104623
- Peptide Label:	isoform X10
- UniProtKB:	A0A8I6ASR6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000093170 ⟸ ENSRNOT00000115244

Ensembl Acc Id:

ENSRNOP00000052106 ⟸ ENSRNOT00000055232

Ensembl Acc Id:

ENSRNOP00000089773 ⟸ ENSRNOT00000106731

Ensembl Acc Id:

ENSRNOP00000087669 ⟸ ENSRNOT00000103585

Ensembl Acc Id:

ENSRNOP00000083574 ⟸ ENSRNOT00000118753

Ensembl Acc Id:

ENSRNOP00000086721 ⟸ ENSRNOT00000109829

RefSeq Acc Id:	XP_063139454 ⟸ XM_063283384
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I6ASR6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139450 ⟸ XM_063283380
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063139447 ⟸ XM_063283377
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063139452 ⟸ XM_063283382
- Peptide Label:	isoform X6
- UniProtKB:	Q6AYR2 (UniProtKB/Swiss-Prot), A0A8I6ASR6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139451 ⟸ XM_063283381
- Peptide Label:	isoform X4
- UniProtKB:	D4ACZ5 (UniProtKB/TrEMBL), A0A8I6ASR6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139448 ⟸ XM_063283378
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063139449 ⟸ XM_063283379
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063139455 ⟸ XM_063283385
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I6ASR6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139453 ⟸ XM_063283383
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6ASR6 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4ACZ5-F1-model_v2	AlphaFold	D4ACZ5	1-346	view protein structure
AF-Q6AYR2-F1-model_v2	AlphaFold	Q6AYR2	1-375	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1359424	AgrOrtholog
BioCyc Gene	G2FUF-47071	BioCyc
Ensembl Genes	ENSRNOG00000036813	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOG00000064950	Ensembl
Ensembl Transcript	ENSRNOT00000055232	ENTREZGENE
	ENSRNOT00000103585.1	UniProtKB/Swiss-Prot
	ENSRNOT00000109829	ENTREZGENE
	ENSRNOT00000109829.1	UniProtKB/Swiss-Prot
Gene3D-CATH	3.40.50.1820	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7109582	IMAGE-MGC_LOAD
InterPro	AB_hydrolase	UniProtKB/Swiss-Prot
	NDRG	UniProtKB/Swiss-Prot
KEGG Report	rno:296318	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:93790	IMAGE-MGC_LOAD
NCBI Gene	296318	ENTREZGENE
PANTHER	PTHR11034	UniProtKB/Swiss-Prot
Pfam	Ndr	UniProtKB/Swiss-Prot
PhenoGen	Ndrg3	PhenoGen
RatGTEx	ENSRNOG00000036813	RatGTEx
	ENSRNOG00000064950	RatGTEx
Superfamily-SCOP	SSF53474	UniProtKB/Swiss-Prot
UniProt	A0A8I6AJ76_RAT	UniProtKB/TrEMBL
	A0A8I6ASR6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AVW4_RAT	UniProtKB/TrEMBL
	A0A8I6GAX3_RAT	UniProtKB/TrEMBL
	D4ACZ5	ENTREZGENE, UniProtKB/TrEMBL
	NDRG3_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-08-14	Ndrg3	NDRG family member 3	Ndrg3	N-myc downstream regulated gene 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2013-07-29	Ndrg3	N-myc downstream regulated gene 3	Ndrg3	NDRG family member 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2013-05-24	Ndrg3	NDRG family member 3	LOC100366265	N-myc downstream regulated gene 3-like	Data merged from RGD:2323994	1643240	APPROVED
2013-02-27	Ndrg3	NDRG family member 3	Ndrg3	N-myc downstream regulated gene 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2011-02-22	Ndrg3	N-myc downstream regulated gene 3	Ndrg3	N-myc downstream regulated 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2011-02-18	Ndrg3	N-myc downstream regulated 3	Ndrg3	N-myc downstream regulated gene 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2010-05-06	LOC100366265	N-myc downstream regulated gene 3-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-03-04	Ndrg3	N-myc downstream regulated gene 3	LOC296318	similar to Ndr3 protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-07-29	LOC296318	similar to Ndr3 protein			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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