Slc25a37 (solute carrier family 25 member 37) - Rat Genome Database

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Gene: Slc25a37 (solute carrier family 25 member 37) Rattus norvegicus
Analyze
Symbol: Slc25a37
Name: solute carrier family 25 member 37
RGD ID: 1359361
Description: Predicted to enable ferrous iron transmembrane transporter activity. Predicted to be involved in iron import into the mitochondrion and positive regulation of hemoglobin biosynthetic process. Predicted to be located in mitochondrial inner membrane. Predicted to be active in mitochondrial membrane. Orthologous to human SLC25A37 (solute carrier family 25 member 37); PARTICIPATES IN iron uptake pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC306000; mitochondrial carrier domain containing protein RGD1359361; mitochondrial iron transporter 1; mitochondrial solute carrier-like protein; mitoferrin-1; Mscp; RGD1359361; similar to mitochondrial solute carrier-like protein; solute carrier family 25 (mitochondrial iron transporter), member 37; solute carrier family 25, member 37
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81550,944,085 - 50,986,506 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1550,946,236 - 50,986,808 (-)EnsemblGRCr8
mRatBN7.21544,534,280 - 44,576,697 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1544,536,727 - 44,577,199 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1548,654,708 - 48,694,617 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01549,766,201 - 49,806,109 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01546,625,537 - 46,665,442 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01551,125,764 - 51,168,384 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1551,128,268 - 51,168,384 (-)Ensemblrn6Rnor6.0
Rnor_5.01554,858,085 - 54,898,295 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41549,806,324 - 49,846,988 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1544,219,968 - 44,259,652 (-)NCBICelera
RGSC_v3.11549,822,103 - 49,862,768 (-)NCBI
Cytogenetic Map15p11NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View
anemia  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-butoxyethanol  (ISO)
2-palmitoylglycerol  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
6-propyl-2-thiouracil  (EXP)
acrolein  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
anthracen-2-amine  (EXP)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
avobenzone  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (EXP,ISO)
caffeine  (EXP)
carbon nanotube  (ISO)
cobalt dichloride  (EXP,ISO)
cocaine  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
cyproconazole  (ISO)
diarsenic trioxide  (ISO)
dibenz[a,h]anthracene  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (ISO)
disulfiram  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
endosulfan  (EXP)
entinostat  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
ethyl methanesulfonate  (ISO)
fluoranthene  (ISO)
flutamide  (EXP)
folic acid  (ISO)
FR900359  (ISO)
gentamycin  (EXP)
heroin  (ISO)
inulin  (ISO)
manganese(II) chloride  (EXP)
metformin  (ISO)
methapyrilene  (ISO)
methoxyacetic acid  (EXP)
methyl methanesulfonate  (ISO)
methylmercury chloride  (EXP)
Monobutylphthalate  (EXP)
N-methyl-4-phenylpyridinium  (EXP)
nitrofen  (EXP)
oxaliplatin  (EXP)
ozone  (ISO)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
phosphane  (EXP)
pirinixic acid  (ISO)
potassium chromate  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
propiconazole  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
serpentine asbestos  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
tamoxifen  (ISO)
testosterone  (EXP)
tetrachloromethane  (EXP,ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
trimellitic anhydride  (ISO)
triphenyl phosphate  (ISO)
tungsten  (ISO)
valdecoxib  (EXP)
valproic acid  (ISO)
vincristine  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Cellular iron uptake, trafficking and metabolism: Key molecules and mechanisms and their roles in disease. Lane DJ, etal., Biochim Biophys Acta. 2015 May;1853(5):1130-44. doi: 10.1016/j.bbamcr.2015.01.021. Epub 2015 Feb 4.
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:15489334   PMID:16511496   PMID:18614015   PMID:19075006   PMID:19805291  


Genomics

Comparative Map Data
Slc25a37
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81550,944,085 - 50,986,506 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1550,946,236 - 50,986,808 (-)EnsemblGRCr8
mRatBN7.21544,534,280 - 44,576,697 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1544,536,727 - 44,577,199 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1548,654,708 - 48,694,617 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01549,766,201 - 49,806,109 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01546,625,537 - 46,665,442 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01551,125,764 - 51,168,384 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1551,128,268 - 51,168,384 (-)Ensemblrn6Rnor6.0
Rnor_5.01554,858,085 - 54,898,295 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41549,806,324 - 49,846,988 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1544,219,968 - 44,259,652 (-)NCBICelera
RGSC_v3.11549,822,103 - 49,862,768 (-)NCBI
Cytogenetic Map15p11NCBI
SLC25A37
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38823,528,956 - 23,575,463 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl823,528,956 - 23,575,463 (+)Ensemblhg38GRCh38
GRCh37823,386,469 - 23,432,976 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36823,442,308 - 23,486,008 (+)NCBIBuild 36Build 36hg18NCBI36
Celera822,349,849 - 22,393,485 (+)NCBICelera
Cytogenetic Map8p21.2NCBI
HuRef821,931,691 - 21,975,329 (+)NCBIHuRef
CHM1_1823,588,441 - 23,632,083 (+)NCBICHM1_1
T2T-CHM13v2.0823,803,825 - 23,850,325 (+)NCBIT2T-CHM13v2.0
Slc25a37
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391469,479,297 - 69,522,993 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1469,479,297 - 69,522,561 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381469,241,848 - 69,285,544 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1469,241,848 - 69,285,112 (-)Ensemblmm10GRCm38
MGSCv371469,859,908 - 69,903,160 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361468,195,181 - 68,238,433 (-)NCBIMGSCv36mm8
Celera1467,022,482 - 67,064,035 (-)NCBICelera
Cytogenetic Map14D2NCBI
cM Map1436.03NCBI
Slc25a37
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540346,697,560 - 46,739,903 (+)Ensembl
ChiLan1.0NW_00495540346,697,560 - 46,739,082 (+)NCBIChiLan1.0ChiLan1.0
SLC25A37
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2742,033,353 - 42,079,997 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1817,760,577 - 17,807,224 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0822,778,309 - 22,824,871 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1819,713,441 - 19,759,994 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl819,713,441 - 19,759,993 (+)EnsemblpanPan2panpan1.1
SLC25A37
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12533,923,108 - 33,965,577 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2533,894,132 - 33,965,398 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2534,511,573 - 34,554,057 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02534,129,732 - 34,172,191 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2534,100,661 - 34,172,110 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12534,076,909 - 34,119,402 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02533,931,011 - 33,973,657 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02534,086,138 - 34,129,133 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Slc25a37
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494311,554,006 - 11,590,145 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365556,980,194 - 7,018,134 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365556,980,239 - 7,016,490 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A37
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl147,665,007 - 7,706,768 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1147,665,002 - 7,709,998 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2148,517,481 - 8,695,604 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC25A37
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1821,646,854 - 21,691,812 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl821,646,869 - 21,694,938 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605220,526,478 - 20,574,556 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc25a37
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475818,753,336 - 18,792,088 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462475818,753,465 - 18,792,025 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Slc25a37
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11254,826,439 - 54,868,254 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Slc25a37
525 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:75
Count of miRNA genes:59
Interacting mature miRNAs:66
Transcripts:ENSRNOT00000021636
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300144Rf23Renal function QTL 233.61renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)1544806773104695021Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15231575953331089Rat
152025253Hrtrt24Heart rate QTL 243.82heart pumping trait (VT:2000009)153185580392671517Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152852773273527732Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)154367724488677244Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)154367724488677244Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)1525285835104695021Rat
2324620Coatc3Coat color QTL 3coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)152233635152597086Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)1525285835104695021Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151915576287086765Rat
1598828Glom14Glomerulus QTL 142.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)154046315285463152Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151492659471614418Rat
631550Bw7Body weight QTL 73.6body mass (VT:0001259)body weight (CMO:0000012)152233635167336351Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)154367724488677244Rat
2306968Anxrr23Anxiety related response QTL 234.83reflex trait (VT:0001961)amplitude of the acoustic startle response (CMO:0001520)154480677352597086Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)1525285835104695021Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)154367724488677244Rat
7411725Strs7Sensitivity to stroke QTL 73.8cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)154446544756583797Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)154367724488677244Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 162 91 90 59 92 59 6 356 192 11 141 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001013996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006252266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC141168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC082071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ227341 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ227813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ231671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ231945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ233331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ233513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000021636   ⟹   ENSRNOP00000021636
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1550,946,532 - 50,986,808 (-)Ensembl
mRatBN7.2 Ensembl1544,536,727 - 44,577,199 (-)Ensembl
Rnor_6.0 Ensembl1551,128,268 - 51,168,384 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000165024   ⟹   ENSRNOP00000100503
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1550,946,236 - 50,986,500 (-)Ensembl
RefSeq Acc Id: NM_001013996   ⟹   NP_001014018
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81550,946,589 - 50,986,500 (-)NCBI
mRatBN7.21544,536,784 - 44,576,697 (-)NCBI
Rnor_6.01551,128,268 - 51,168,384 (-)NCBI
Rnor_5.01554,858,085 - 54,898,295 (-)NCBI
RGSC_v3.41549,806,324 - 49,846,988 (-)RGD
Celera1544,219,968 - 44,259,652 (-)RGD
Sequence:
RefSeq Acc Id: XM_006252266   ⟹   XP_006252328
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81550,944,085 - 50,986,479 (-)NCBI
mRatBN7.21544,534,280 - 44,576,656 (-)NCBI
Rnor_6.01551,125,764 - 51,168,377 (-)NCBI
Rnor_5.01554,858,085 - 54,898,295 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017599697   ⟹   XP_017455186
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81550,944,085 - 50,954,326 (-)NCBI
mRatBN7.21544,534,280 - 44,544,503 (-)NCBI
Rnor_6.01551,125,764 - 51,136,007 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017599698   ⟹   XP_017455187
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81550,944,085 - 50,951,348 (-)NCBI
mRatBN7.21544,534,280 - 44,541,728 (-)NCBI
Rnor_6.01551,125,764 - 51,133,223 (-)NCBI
Sequence:
RefSeq Acc Id: XM_063274297   ⟹   XP_063130367
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81550,946,348 - 50,986,506 (-)NCBI
RefSeq Acc Id: NP_001014018   ⟸   NM_001013996
- UniProtKB: Q66H23 (UniProtKB/Swiss-Prot),   A6HTH0 (UniProtKB/TrEMBL),   A0A8L2QC12 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006252328   ⟸   XM_006252266
- Peptide Label: isoform X1
- UniProtKB: A0A8L2QC12 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017455186   ⟸   XM_017599697
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_017455187   ⟸   XM_017599698
- Peptide Label: isoform X4
- Sequence:
Ensembl Acc Id: ENSRNOP00000021636   ⟸   ENSRNOT00000021636
RefSeq Acc Id: XP_063130367   ⟸   XM_063274297
- Peptide Label: isoform X2
Ensembl Acc Id: ENSRNOP00000100503   ⟸   ENSRNOT00000165024

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q66H23-F1-model_v2 AlphaFold Q66H23 1-338 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699797
Promoter ID:EPDNEW_R10320
Type:single initiation site
Name:Slc25a37_1
Description:solute carrier family 25 member 37
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01551,168,289 - 51,168,349EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1359361 AgrOrtholog
BioCyc Gene G2FUF-13266 BioCyc
Ensembl Genes ENSRNOG00000015495 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000021636 ENTREZGENE
Gene3D-CATH 1.50.40.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7132913 IMAGE-MGC_LOAD
InterPro Mitochondrial_sb/sol_carrier UniProtKB/Swiss-Prot
  Mt_carrier_dom_sf UniProtKB/Swiss-Prot
KEGG Report rno:306000 UniProtKB/Swiss-Prot
MGC_CLONE MGC:95235 IMAGE-MGC_LOAD
NCBI Gene 306000 ENTREZGENE
PANTHER MITOFERRIN-1 UniProtKB/Swiss-Prot
  MITOFERRIN-1-RELATED UniProtKB/Swiss-Prot
Pfam Mito_carr UniProtKB/Swiss-Prot
PhenoGen Slc25a37 PhenoGen
PROSITE SOLCAR UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000015495 RatGTEx
Superfamily-SCOP SSF103506 UniProtKB/Swiss-Prot
UniProt A0A8L2QC12 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0L992_RAT UniProtKB/TrEMBL
  A6HTH0 ENTREZGENE, UniProtKB/TrEMBL
  MFRN1_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-24 Slc25a37  solute carrier family 25 member 37  Slc25a37  solute carrier family 25 (mitochondrial iron transporter), member 37  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-10-16 Slc25a37  solute carrier family 25 (mitochondrial iron transporter), member 37  Slc25a37  solute carrier family 25, member 37  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-07 Slc25a37  solute carrier family 25, member 37  RGD1359361  mitochondrial carrier domain containing protein RGD1359361  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-11-17 RGD1359361  mitochondrial carrier domain containing protein RGD1359361  LOC306000  similar to mitochondrial solute carrier-like protein  Symbol and Name updated 1299863 APPROVED
2005-07-29 LOC306000  similar to mitochondrial solute carrier-like protein      Symbol and Name status set to provisional 70820 PROVISIONAL