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Gene: Eogt (EGF domain specific O-linked N-acetylglucosamine transferase) Rattus norvegicus

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Symbol:

Eogt

Name:

EGF domain specific O-linked N-acetylglucosamine transferase

RGD ID:

1359357

Description:

Predicted to enable protein O-acetylglucosaminyltransferase activity. Predicted to be involved in protein O-linked glycosylation. Predicted to be located in endoplasmic reticulum. Predicted to be active in endoplasmic reticulum lumen. Human ortholog(s) of this gene implicated in Adams-Oliver syndrome. Orthologous to human EOGT (EGF domain specific O-linked N-acetylglucosamine transferase); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; acrylamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

Aer61; EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase; EGF domain-specific O-linked N-acetylglucosamine transferase; extracellular O-linked N-acetylglucosamine transferase; glycosyltransferase Aer61; uncharacterized glycosyltransferase AER61

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	131,275,587 - 131,313,243 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	131,276,573 - 131,311,926 (-)	Ensembl				GRCr8
mRatBN7.2	4	129,718,897 - 129,756,558 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	129,718,901 - 129,756,445 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	135,145,672 - 135,181,170 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	130,926,712 - 130,962,211 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	129,544,671 - 129,580,156 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	129,477,779 - 129,515,435 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	129,477,807 - 129,515,435 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	193,981,263 - 194,019,171 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	131,833,304 - 131,869,461 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	118,596,974 - 118,632,628 (-)	NCBI		Celera
RGSC_v3.1	4	132,078,144 - 132,114,302 (-)	NCBI
Cytogenetic Map	4	q34	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Adams-Oliver syndrome (ISO)

Adams-Oliver Syndrome 4 (ISO)

Desbuquois dysplasia (ISO)

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

acrolein (ISO)

acrylamide (EXP,ISO)

aflatoxin B1 (ISO)

aflatoxin M1 (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol F (ISO)

butanal (ISO)

cadmium dichloride (ISO)

chlorpyrifos (ISO)

cobalt dichloride (ISO)

dexamethasone (ISO)

diquat (ISO)

dorsomorphin (ISO)

entinostat (ISO)

ethanol (ISO)

folic acid (ISO)

GSK-J4 (ISO)

indometacin (ISO)

ivermectin (ISO)

mercury dibromide (ISO)

methylmercury chloride (ISO)

okadaic acid (ISO)

ozone (ISO)

panobinostat (ISO)

paracetamol (EXP)

pentanal (ISO)

perfluorohexanesulfonic acid (ISO)

perfluorooctanoic acid (ISO)

phenylmercury acetate (ISO)

potassium chromate (ISO)

quercetin (ISO)

quinolin-8-ol (ISO)

resveratrol (ISO)

SB 431542 (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

temozolomide (ISO)

tetrachloromethane (EXP)

thapsigargin (EXP)

thioacetamide (EXP)

thiram (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

protein O-linked glycosylation (ISO,ISS)

Cellular Component

endoplasmic reticulum lumen (IBA,IEA)

Molecular Function

glycosyltransferase activity (IEA)

protein binding (ISO)

protein O-acetylglucosaminyltransferase activity (IBA,IEA,ISO,ISS)

transferase activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:22310717

Genomics

Comparative Map Data

Eogt
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	131,275,587 - 131,313,243 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	131,276,573 - 131,311,926 (-)	Ensembl				GRCr8
mRatBN7.2	4	129,718,897 - 129,756,558 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	129,718,901 - 129,756,445 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	135,145,672 - 135,181,170 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	130,926,712 - 130,962,211 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	129,544,671 - 129,580,156 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	129,477,779 - 129,515,435 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	129,477,807 - 129,515,435 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	193,981,263 - 194,019,171 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	131,833,304 - 131,869,461 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	118,596,974 - 118,632,628 (-)	NCBI		Celera
RGSC_v3.1	4	132,078,144 - 132,114,302 (-)	NCBI
Cytogenetic Map	4	q34	NCBI

EOGT
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	68,975,225 - 69,013,684 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	68,975,217 - 69,013,684 (-)	Ensembl			hg38	GRCh38
GRCh37	3	69,024,376 - 69,062,835 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	69,107,058 - 69,145,464 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	3	68,952,460 - 68,990,886 (-)	NCBI		Celera
Cytogenetic Map	3	p14.1	NCBI
HuRef	3	69,025,405 - 69,064,100 (-)	NCBI		HuRef
CHM1_1	3	68,967,096 - 69,014,262 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	69,011,970 - 69,050,451 (-)	NCBI		T2T-CHM13v2.0

Eogt
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	97,086,977 - 97,128,445 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	97,086,985 - 97,126,143 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	6	97,110,016 - 97,151,484 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	97,110,024 - 97,149,182 (-)	Ensembl			mm10	GRCm38
MGSCv37	6	97,060,938 - 97,098,877 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	6	97,076,407 - 97,114,346 (-)	NCBI		MGSCv36	mm8
Celera	6	98,971,682 - 99,007,964 (-)	NCBI		Celera
Cytogenetic Map	6	D3	NCBI
cM Map	6	44.88	NCBI

Eogt
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955421	18,846,420 - 18,879,985 (+)	Ensembl
ChiLan1.0	NW_004955421	18,845,626 - 18,879,008 (+)	NCBI	ChiLan1.0	ChiLan1.0

EOGT
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	68,929,882 - 68,969,526 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	68,935,557 - 68,975,490 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	68,910,100 - 68,950,816 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	70,277,052 - 70,317,471 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	70,277,450 - 70,317,465 (-)	Ensembl			panPan2	panpan1.1

EOGT
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	22,722,142 - 22,757,188 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	22,722,919 - 22,757,136 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	22,700,472 - 22,730,866 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	22,748,283 - 22,784,106 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	22,748,323 - 22,784,097 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	22,445,490 - 22,476,039 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	22,788,996 - 22,819,398 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	22,859,033 - 22,889,647 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Eogt
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404942	1,608,350 - 1,637,435 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936603	1,612,510 - 1,636,291 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936603	1,608,173 - 1,638,052 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EOGT
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	50,396,629 - 50,436,199 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	13	50,396,625 - 50,436,218 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	55,478,584 - 55,518,845 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EOGT
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	30,002,069 - 30,040,851 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	29,999,914 - 30,035,877 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666041	136,752,774 - 136,790,465 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Eogt
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624773	3,534,833 - 3,582,752 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624773	3,536,059 - 3,582,847 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Eogt
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	6	49,886,834 - 49,916,332 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Eogt
284 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	105
Count of miRNA genes:	88
Interacting mature miRNAs:	93
Transcripts:	ENSRNOT00000039353
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1582232	Gluco25	Glucose level QTL 25	3.6	0.0023	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	86583980	149763391	Rat
631689	Scl4	Serum cholesterol level QTL 4	1.9	0.008	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	4	96731383	141731383	Rat
2302049	Pia32	Pristane induced arthritis QTL 32	5.1	0.001	blood autoantibody amount (VT:0003725)	serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)	4	107346299	152346299	Rat
1578655	Bmd11	Bone mineral density QTL 11	11		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	4	92406430	137406430	Rat
1300116	Hrtrt5	Heart rate QTL 5	3.76		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	4	117737142	152833657	Rat
10755501	Bp390	Blood pressure QTL 390	2.5		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	4	27730518	170099664	Rat
6478763	Anxrr46	Anxiety related response QTL 46		0.07428	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	112427331	157427331	Rat
6478760	Anxrr45	Anxiety related response QTL 45		0.06717	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	112427331	157427331	Rat
61451	Ciaa4	CIA Autoantibody QTL 4	3.1		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	4	123870974	168870974	Rat
1331802	Srn5	Serum renin concentration QTL 5	3.045		renin activity (VT:0005581)	plasma renin activity level (CMO:0000116)	4	117559384	162559384	Rat
61330	Eau1	Experimental allergic uveoretinitis QTL 1		0.0003	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	4	26234499	134199155	Rat
738009	Sach4	Saccharine consumption QTL 4	4.9	0.000016	consumption behavior trait (VT:0002069)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	60916264	184426481	Rat
7207480	Bss105	Bone structure and strength QTL 105	8.1		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	4	111383604	156383604	Rat
634335	Anxrr16	Anxiety related response QTL 16	7.22		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	4	94638356	168870820	Rat
737821	Hcar9	Hepatocarcinoma resistance QTL 9	3.7		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	4	106848959	168870974	Rat
731165	Uae21	Urinary albumin excretion QTL 21	2.4	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	4	108206096	153206096	Rat
631646	Stl4	Serum triglyceride level QTL 4	6.5	0.0001	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	4	74169813	134199155	Rat
634334	Xhs3	X-ray hypersensitivity QTL 3	10		intestine integrity trait (VT:0010554)	post-insult time to onset of moribundity (CMO:0001896)	4	86058928	131411333	Rat
7411558	Bw133	Body weight QTL 133	13.84	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	127263297	172263297	Rat
6478778	Anxrr51	Anxiety related response QTL 51		0.25384	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	4	126334185	171334185	Rat
61406	Scwia1	Streptococcal cell wall induced arthritis QTL 1	2.3		joint integrity trait (VT:0010548)	experimental arthritis severity measurement (CMO:0001459)	4	75939858	140508796	Rat
631511	Pia7	Pristane induced arthritis QTL 7	4.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	123870974	168870974	Rat
1549832	Bss3	Bone structure and strength QTL 3	11		femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	4	111383604	156383604	Rat
1354612	Foco1	Food consumption QTL 1	8.87		eating behavior trait (VT:0001431)	food intake rate (CMO:0000427)	4	45429897	149763204	Rat
70177	Xhs1	X-ray hypersensitivity QTL 1	25.1		intestine integrity trait (VT:0010554)	post-insult time to onset of moribundity (CMO:0001896)	4	82944895	154403548	Rat
634347	Hcar8	Hepatocarcinoma resistance QTL 8	5.8		liver integrity trait (VT:0010547)	liver tumorous lesion area to total liver area ratio (CMO:0001075)	4	124700988	169700988	Rat
2303168	Bp330	Blood pressure QTL 330	4.25	0.017	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	5889999	148002343	Rat
738031	Alc14	Alcohol consumption QTL 14	7.6	0.00003	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	174095838	Rat
61476	Aia3	Adjuvant induced arthritis QTL 3	3.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	75939858	140508796	Rat
1576316	Ept5	Estrogen-induced pituitary tumorigenesis QTL 5	3.8		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	4	100752691	179366077	Rat
1576305	Emca6	Estrogen-induced mammary cancer QTL 6	5.8		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	4	45429709	157555683	Rat
738016	Alc16	Alcohol consumption QTL 16	3.6	0.00015	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	184426481	Rat
1358202	Gluco11	Glucose level QTL 11	2.4	0.02	adipocyte glucose uptake trait (VT:0004185)	absolute change in adipocyte glucose uptake (CMO:0000873)	4	86709649	168870974	Rat
1354660	Salc1	Saline consumption QTL 1	11.26		drinking behavior trait (VT:0001422)	saline drink intake rate (CMO:0001627)	4	45429897	149763204	Rat
737978	Pia23	Pristane induced arthritis QTL 23	5.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	123870974	168870974	Rat
631674	Iddm14	Insulin dependent diabetes mellitus QTL 14			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	4	65495851	159259805	Rat
2293840	Kiddil9	Kidney dilation QTL 9	2.9		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	4	113634167	149763391	Rat
12798519	Anxrr54	Anxiety related response QTL 54	2.54	0.05	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	116184844	161184844	Rat
1578670	Bss14	Bone structure and strength QTL 14	16.4		femur morphology trait (VT:0000559)	bone trabecular cross-sectional area (CMO:0002311)	4	88883695	133883695	Rat
12798523	Anxrr56	Anxiety related response QTL 56	2.83	0.05	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	86583980	131583980	Rat
70201	Gcr1	Gastric cancer resistance QTL 1	2.7		stomach morphology trait (VT:0000470)	stomach tumor susceptibility score (CMO:0002043)	4	103834277	148834277	Rat
70200	Alc18	Alcohol consumption QTL 18	9.2		drinking behavior trait (VT:0001422)	ethanol intake volume to total fluid intake volume ratio (CMO:0001591)	4	57613339	151163960	Rat
12798527	Anxrr58	Anxiety related response QTL 58	4.11	0.05	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	121020385	148834277	Rat
2316958	Gluco58	Glucose level QTL 58	10		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	12212457	182430611	Rat
1578662	Bss15	Bone structure and strength QTL 15	19.6		femur width (VT:1000666)	femoral neck width (CMO:0001695)	4	88883695	133883695	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001009502	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763145	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592764	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592765	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592766	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592767	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039108043	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039108044	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286449	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286450	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC112891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ868236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473957	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000039353 ⟹ ENSRNOP00000034561

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	4	129,479,766 - 129,515,435 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000077530 ⟹ ENSRNOP00000073147

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	131,276,573 - 131,311,926 (-)	Ensembl
mRatBN7.2 Ensembl	4	129,718,914 - 129,756,445 (-)	Ensembl
Rnor_6.0 Ensembl	4	129,477,807 - 129,514,390 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000115685 ⟹ ENSRNOP00000081702

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	4	129,718,901 - 129,752,586 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000125432 ⟹ ENSRNOP00000106888

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	131,277,574 - 131,309,269 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000130855 ⟹ ENSRNOP00000105223

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	131,276,573 - 131,311,926 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000154943 ⟹ ENSRNOP00000105600

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	131,276,573 - 131,311,863 (-)	Ensembl

RefSeq Acc Id:

NM_001009502 ⟹ NP_001009502

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	131,277,574 - 131,313,243 (-)	NCBI
mRatBN7.2	4	129,720,886 - 129,756,558 (-)	NCBI
Rnor_6.0	4	129,479,766 - 129,515,435 (-)	NCBI
Rnor_5.0	4	193,981,263 - 194,019,171 (-)	NCBI
RGSC_v3.4	4	131,833,304 - 131,869,461 (-)	RGD
Celera	4	118,596,974 - 118,632,628 (-)	RGD

Sequence:

show sequence

ATGCGCATACATGTAATTATGATCACCTACACAAGCAGAATAGAAATAATTATGAAAGAGCAAA
AACAAAAGTTAAGAGTAGCCATTGAACTTGGACAGTTCACGGACAGTCCCCTCCAGACACTTTG
GTCGCTGGGTGTGGTCAAGGCATTCGGGTCCGCCCTTGAGCCCGGAGCCAAGGTGTCGTGTCTG
CTCCCGGGCGCCCCCTGGCCCGACTTGGGCGCCGGAGGTTTCCGGTTCGCGGCCGCCGGCGGTG
ACGTCTCGTTTGCTCCCGAGCCGCCCGCGCCGCCGCTCCCTAGCCAAGCTGCAGGCCTGTGGAA
ATCCAATCAAGCCATACACCGAGTGGAGCGCGCTTGGCCGTTTTGTGCAAGAAGACGCGGTAGC
CTTGCCGAGTCTTGCCAGAGAACTCAACTCCAAGAAGGCTTTCTGCCAGGCCCTGAAGTTGTAC
TTTAATGCACCATAGGGAACCCAGCGTATGCAAGTGGAGCCGTGGATTTGGATAACCGAAATTC
TGGACCTACTCTTCCTAGCAGTGACTTAGAGGGTCTGCAGGTTGCTATGTTAATGCTGCTTGTC
TTTGGAGTACTGCTTCATGAAGTCCCCCTGAGTGGCCAGGACGAGGCTCATCCTGAGGCTGACA
GAGTGCCCGGCGAAGCCCTCTATGACTACTCCAGCCTCCGCCTCCCAGAGGAGCACATTCCCTT
CTTCCTGCACAGTAACAGGCATGTTGCCTCTGTGTGCAGGGAGGATTCCCACTGTCCGTATAAG
AAACACTTAGAGAGTCTAAATTCCTGCTGGGGGTATGAGAAGTCCTGCACACCAGAGTCTAGAT
TTGGCTCCCCCATTTGCAGCTATGTGGACTTGGGATGGACCGACACCCTGGAGTCAGCCCAGGA
CATGTTCTGGAAACAAGCTGACTTCGGATATGCTCGGGAGCGGCTGGAGGAGATACGAATGTTC
TGCCGGCCAGAGAGTGCGAGCGACTCAAGTCTGCTTTGCTCTCGTTACCTTCAGTATTGTAGAG
CTACTGGTCTATACCTGGACTTAAGAAACATCAAGAGAAACCATGACAGATTCAAGGAAGATTT
TCTTCAGGGTGGTGATATTGGAGGATACTGTAAACTTGACCGTCATGCACTGGTGTCTGAAGGT
CAGCGCAAAAGCCCTCTGCAGTCTTGGTTTGCTGAGCTACAAGGCTACACTCAGCTCAATTTCA
GGCCTATAGAAGATGCTAAATGTGACATCGTTGTTGAAAAACCAACATATTTTATGAAATTAGA
TGCAGGTATTAACATGTACCACCACTTTTGTGACTTCCTGAATCTCTACCTCACTCAGCACATA
AACAATTCTTTCAGTACAGACGTGTACATTGTCATGTGGGACACCAGCTCTTATGGATACGGTG
ACCTCTTCTCTGATACCTGGAAAGCATTTACTGACTATGACGTCATACATTTGAAAACCTACGA
TTCCAAAAAGGTGTGTTTTAAAGAAGCTGTGTTTTCGTTGCTGCCCCGCATGCGGTACGGGCTG
TTCTATAACACGCCTCTGATCTCTGGCTGTCAGAACACTGGGTTATTCAGGGCCTTCTCCCAGC
ACGTGCTGCACAGGCTGAACATCTCTCAAGAGGGACCCAAGGATGGGAAACTTCGAGTTACCAT
TCTTGCACGCAGCACAGAATACCGGAAAATCCTGAACCAAAATGAGCTGGTAAATGCCCTGAAA
ACAGTATCCACATTTGAAGTCCGGGTGGTTGATTACAAGTACAGAGAACTCGGGTTTTTAGATC
AGCTAAGGATCACGCACAACACGGACATATTTATCGGCATGCACGGAGCTGGTCTTACCCACTT
ACTTTTCCTTCCAGACTGGGCTGCTGTATTCGAGCTGTACAACTGTGAGGATGAGCGCTGTTAC
TTAGACCTGGCCAGGCTCAGAGGCATCTACTACATCACCTGGCAGAAGCCCAGCAAAGTGTTTC
CTCAAGATAAGGGGCACCATCCAACTCTGGGGGAGCACCCGAAGTTTACCAACTACTCTTTCGA
CGTAGAGGAATTCATGTACCTTGTCCTGCAGGCTGCAGAACATGTACTGCAGCACCCGCAGTGG
CCGTTGAAGAAGAACCACGATGAACTATAG

hide sequence

RefSeq Acc Id:

XM_008763145 ⟹ XP_008761367

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	131,275,587 - 131,312,771 (-)	NCBI
mRatBN7.2	4	129,718,897 - 129,756,106 (-)	NCBI
Rnor_6.0	4	129,477,779 - 129,514,977 (-)	NCBI

Sequence:

show sequence

CGCCCTTGAGCCCGGAGCCAAGGTGTCGTGTCTGCTCCCGGGCGCCCCCTGGCCCGACTTGGGC
GCCGGAGGTTTCCGGTTCGCGGCCGCCGGCGGTGACGTCTCGTTTGCTCCCGAGCCGCCCGCGC
CGCCGCTCCCTAGCCAAGCTGCAGGCCTGTGGAAATCCAATCAAGCCATACACGAGTGGAGCGC
GCTTGGCCGTTTTGTGCAAGAAGACGCGGTAGCCTTGCCGAGTCTTGCCAGAGAACTCAACTCC
AAGAAGGCTTTCTGCCAGGCCCTGAAGTTGTACTTTAATGCACCATAGGGAACCCAGCGTATGC
AAGTGGTTTTGTTAACCAGCAGAACGCATTGCAGAGCCGTGGATTTGGATAACCGAAATTCTGG
ACCTACTCTTCCTAGCAGTGACTTAGAGGGTCTGCAGGTTGCTATGTTAATGCTGCTTGTCTTT
GGAGTACTGCTTCATGAAGTCCCCCTGAGTGGCCAGGACGAGGCTCATCCTGAGGCTGACAGAG
TGCCCGGCGAAGCCCTCTATGACTACTCCAGCCTCCGCCTCCCAGAGGAGCACATTCCCTTCTT
CCTGCACAGTAACAGGCATGTTGCCTCTGTGTGCAGGGAGGATTCCCACTGTCCGTATAAGAAA
CACTTAGAGAGTCTAAATTCCTGCTGGGGGTATGAGAAGTCCTGCACACCAGAGTCTAGATTTG
GCTCCCCCATTTGCAGCTATGTGGACTTGGGATGGACCGACACCCTGGAGTCAGCCCAGGACAT
GTTCTGGAAACAAGCTGACTTCGGATATGCTCGGGAGCGGCTGGAGGAGATACGAATGTTCTGC
CGGCCAGAGAGTGCGAGCGACTCAAGTCTGCTTTGCTCTCGTTACCTTCAGTATTGTAGAGCTA
CTGGTCTATACCTGGACTTAAGAAACATCAAGAGAAACCATGACAGATTCAAGGAAGATTTTCT
TCAGGGTGGTGATATTGGAGGATACTGTAAACTTGACCGTCATGCACTGGTGTCTGAAGGTCAG
CGCAAAAGCCCTCTGCAGTCTTGGTTTGCTGAGCTACAAGGCTACACTCAGCTCAATTTCAGGC
CTATAGAAGATGCTAAATGTGACATCGTTGTTGAAAAACCAACATATTTTATGAAATTAGATGC
AGGTATTAACATGTACCACCACTTTTGTGACTTCCTGAATCTCTACCTCACTCAGCACATAAAC
AATTCTTTCAGTACAGACGTGTACATTGTCATGTGGGACACCAGCTCTTATGGATACGGTGACC
TCTTCTCTGATACCTGGAAAGCATTTACTGACTATGACGTCATACATTTGAAAACCTACGATTC
CAAAAAGGTGTGTTTTAAAGAAGCTGTGTTTTCGTTGCTGCCCCGCATGCGGTACGGGCTGTTC
TATAACACGCCTCTGATCTCTGGCTGTCAGAACACTGGGTTATTCAGGGCCTTCTCCCAGCACG
TGCTGCACAGGCTGAACATCTCTCAAGAGGGACCCAAGGATGGGAAACTTCGAGTTACCATTCT
TGCACGCAGCACAGAATACCGGAAAATCCTGAACCAAAATGAGCTGGTAAATGCCCTGAAAACA
GTATCCACATTTGAAGTCCGGGTGGTTGATTACAAGTACAGAGAACTCGGGTTTTTAGATCAGC
TAAGGATCACGCACAACACGGACATATTTATCGGCATGCACGGAGCTGGTCTTACCCACTTACT
TTTCCTTCCAGACTGGGCTGCTGTATTCGAGCTGTACAACTGTGAGGATGAGCGCTGTTACTTA
GACCTGGCCAGGCTCAGAGGCATCTACTACATCACCTGGCAGAAGCCCAGCAAAGTGTTTCCTC
AAGATAAGGGGCACCATCCAACTCTGGGGGAGCACCCGAAGTTTACCAACTACTCTTTCGACGT
AGAGGAATTCATGTACCTTGTCCTGCAGGCTGCAGAACATGTACTGCAGCACCCGCAGTGGCCG
TTGAAGAAGAACCACGATGAACTATAGAAATGCCCAGGTTGTTTACCACGGTGTTGGACACTCC
CACAGGCAGACACACAATCAAAGGAGCAGAACAACCTCTCATATCCTACTGTAAGATGATTCAC
GGACTTTACTTCTGAACGTAGCTCAGGCTGGTCTTGAACTCATGATCCCCTTGCCTCAGCCAGC
TGAGCACTCAGCTTACAGATGAGCACGACCACGCCTGTCTACAGAATCACCTTTTCGTGTGAAA
GCGCACCTTCAGGGTACTTTAAGTCTCCCCCATGTCTCTCGTGTCCTGGCTATTTATCAGCAGT
ATTTTTGCACTGAAAAAAAAATGTTACTTTTATAGTTTAGAGCTGGGCAGATGCCCATTGGTGT
AGCTGAGCTTTCCAGTTGGGACACCAAAGTTGTCACCTTCGGTGGCTTCAGAACTGATAAGTGT
GTTTGTTAACTGTAAGTGGTCGTAATTCCAGAGTGTCACAGCTTGATGTTTACCTACTTGGGTA
AACTCAGGACTATTATTGTTTACCATTGTGTGTTCATAAATATGGTTTTAGGGGTTGGTTGGGT
TTAATCCCTAGCAACATACACACATACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTTTCTCATGCATGCACACACGCACACACACACACACACCAGTCCAAGCCTGTGAC
TATCAGGACCAAGCTATAGGAATGTGCTATAGACCAGTGTTTAGTCAACTCCAGCTTACGTGCA
TCAAGAGCCTGAAAGAAAATCATGCTTTTGTATTTATTAATTTGTGTTTCTGTATCTCTTTTGG
ATCATGTATGTAATGGCAATGTTGATAGGAACCCACTGGAACATTCTGCAGTACCATCTCCACT
GACCCTCCAGCCATGGAGAGCATTCGTGCTGACTTGCCAGGGAGTCTTAGTTTCCGTCAGGCAA
GCGTTTGTAAGCACGGACAGCTATGGGTATCCACGTCCGGCAGGATGAAGGTAACCGTAGCCTT
TGTAAAAACTGCCAAGTTGCCACATGAAGAGAAGACTCTTTCTCTGTTTGTTTTTGTTTTTGTT
TTTTAAAGTAAGAGCTTAAAAACACAGTAGACCTGTGAATTACCCAATCAAAACAAAAGCCCTA
AAAAAGTGGCACAGAGTAAACAGGATGTGTGATGCAGGCTTCCCTGCACTGGCTTTAACCGACT
GCTGAGCGTACAGCTCCTGGGTTTATTCTGTTGTACAGTGGGATGATGCTTGAGTCTTGTTAAC
ATTCGAGGCTACTTTTAATTTCTACAGTGCACTTAGCAAATCCCAGCCAAGGACTTTATTTTTA
AATTTTAGAGGAGTGACCTACAAAATAAAATATTGGTAACCAATGCCTCCTCGGAAGCTTGCTG
CCATTTCCTTTCAGGATTTGTTAAAAGACTGCAGAGTTTATTTATTATCTTTAAAGGAAATAGT
GACCCTTCGTAGGCAGGACTTCTCTTCGGGTCGTAAAATTGTTTGGAAAAAAAACTGTAACATG
AGGAATTGTTGGATGGCATGTTTGCCGCTGTTCTAGGTGCAGAATACTAGGTAGGCGGGGGGAG
GAGGGGTGCTCCACAGGAGGGGGCTTGGAAAGATCCTTTTGCCCTGATCATCCGAAGAGAACCA
TCCGGAAGACTGCTTCTGGAAAACCGTCGTCCTCCTACCTCATTGCAAGCAGCACAGGGGCCTG
TGTTCACAGACCACCGAGGATTCCAGAAACTGAGAACAGTCTCACCTGGAAACTGTATCTGAAT
ATTTTGCATTTAGAATATACTTTATATAAAGACAGTCATTTAAATTTTTAATTGATGGGATTAA
CTTTTTATCAGACTTTTTTTGTGGGAGCAGAAGATCTTCAAATGGTTGTAAAATTTAAAGTGTA
GACATGGCCCTTTTTATTAAGTCTGTAAGGGGACACCTTTCATTGTACATTTCAGACATAGCTT
TGGAATAAAGTTTTCTATATTTCATTTAAA

hide sequence

RefSeq Acc Id:

XM_017592764 ⟹ XP_017448253

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	131,275,587 - 131,312,771 (-)	NCBI
mRatBN7.2	4	129,718,897 - 129,756,106 (-)	NCBI
Rnor_6.0	4	129,477,779 - 129,514,977 (-)	NCBI

Sequence:

show sequence

CGCCCTTGAGCCCGGAGCCAAGGTGTCGTGTCTGCTCCCGGGCGCCCCCTGGCCCGACTTGGGC
GCCGGAGGTTTCCGGTTCGCGGCCGCCGGCGGTGACGTCTCGTTTGCTCCCGAGCCGCCCGCGC
CGCCGCTCCCTAGCCAAGCTGCAGGCCTGTGGAAATCCAATCAAGCCATACACGAGTGGAGCGC
GCTTGGCCGTTTTGTGCAAGAAGACGCGGTAGCCTTGCCGAGTCTTGCCAGAGAACTCAACTCC
AAGAAGGCTTTCTGCCAGGCCCTGAAGTTGTACTTTAATGCACCATAGGGAACCCAGCGTATGC
AAGTGGGTACGTGCCCTCCCTTGCAAAAGCCAACTGTCTGATCTGCTTCTTTAGATTTTCCCCA
TGGCTAAGGGTTACTTTTTTCCATGAATGGTCAAGTTTTGTTAACCAGCAGAACGCATTGCAGA
GCCGTGGATTTGGATAACCGAAATTCTGGACCTACTCTTCCTAGCAGTGACTTAGAGGGTCTGC
AGGTTGCTATGTTAATGCTGCTTGTCTTTGGAGTACTGCTTCATGAAGTCCCCCTGAGTGGCCA
GGACGAGGCTCATCCTGAGGCTGACAGAGTGCCCGGCGAAGCCCTCTATGACTACTCCAGCCTC
CGCCTCCCAGAGGAGCACATTCCCTTCTTCCTGCACAGTAACAGGCATGTTGCCTCTGTGTGCA
GGGAGGATTCCCACTGTCCGTATAAGAAACACTTAGAGAGTCTAAATTCCTGCTGGGGGTATGA
GAAGTCCTGCACACCAGAGTCTAGATTTGGCTCCCCCATTTGCAGCTATGTGGACTTGGGATGG
ACCGACACCCTGGAGTCAGCCCAGGACATGTTCTGGAAACAAGCTGACTTCGGATATGCTCGGG
AGCGGCTGGAGGAGATACGAATGTTCTGCCGGCCAGAGAGTGCGAGCGACTCAAGTCTGCTTTG
CTCTCGTTACCTTCAGTATTGTAGAGCTACTGGTCTATACCTGGACTTAAGAAACATCAAGAGA
AACCATGACAGATTCAAGGAAGATTTTCTTCAGGGTGGTGATATTGGAGGATACTGTAAACTTG
ACCGTCATGCACTGGTGTCTGAAGGTCAGCGCAAAAGCCCTCTGCAGTCTTGGTTTGCTGAGCT
ACAAGGCTACACTCAGCTCAATTTCAGGCCTATAGAAGATGCTAAATGTGACATCGTTGTTGAA
AAACCAACATATTTTATGAAATTAGATGCAGGTATTAACATGTACCACCACTTTTGTGACTTCC
TGAATCTCTACCTCACTCAGCACATAAACAATTCTTTCAGTACAGACGTGTACATTGTCATGTG
GGACACCAGCTCTTATGGATACGGTGACCTCTTCTCTGATACCTGGAAAGCATTTACTGACTAT
GACGTCATACATTTGAAAACCTACGATTCCAAAAAGGTGTGTTTTAAAGAAGCTGTGTTTTCGT
TGCTGCCCCGCATGCGGTACGGGCTGTTCTATAACACGCCTCTGATCTCTGGCTGTCAGAACAC
TGGGTTATTCAGGGCCTTCTCCCAGCACGTGCTGCACAGGCTGAACATCTCTCAAGAGGGACCC
AAGGATGGGAAACTTCGAGTTACCATTCTTGCACGCAGCACAGAATACCGGAAAATCCTGAACC
AAAATGAGCTGGTAAATGCCCTGAAAACAGTATCCACATTTGAAGTCCGGGTGGTTGATTACAA
GTACAGAGAACTCGGGTTTTTAGATCAGCTAAGGATCACGCACAACACGGACATATTTATCGGC
ATGCACGGAGCTGGTCTTACCCACTTACTTTTCCTTCCAGACTGGGCTGCTGTATTCGAGCTGT
ACAACTGTGAGGATGAGCGCTGTTACTTAGACCTGGCCAGGCTCAGAGGCATCTACTACATCAC
CTGGCAGAAGCCCAGCAAAGTGTTTCCTCAAGATAAGGGGCACCATCCAACTCTGGGGGAGCAC
CCGAAGTTTACCAACTACTCTTTCGACGTAGAGGAATTCATGTACCTTGTCCTGCAGGCTGCAG
AACATGTACTGCAGCACCCGCAGTGGCCGTTGAAGAAGAACCACGATGAACTATAGAAATGCCC
AGGTTGTTTACCACGGTGTTGGACACTCCCACAGGCAGACACACAATCAAAGGAGCAGAACAAC
CTCTCATATCCTACTGTAAGATGATTCACGGACTTTACTTCTGAACGTAGCTCAGGCTGGTCTT
GAACTCATGATCCCCTTGCCTCAGCCAGCTGAGCACTCAGCTTACAGATGAGCACGACCACGCC
TGTCTACAGAATCACCTTTTCGTGTGAAAGCGCACCTTCAGGGTACTTTAAGTCTCCCCCATGT
CTCTCGTGTCCTGGCTATTTATCAGCAGTATTTTTGCACTGAAAAAAAAATGTTACTTTTATAG
TTTAGAGCTGGGCAGATGCCCATTGGTGTAGCTGAGCTTTCCAGTTGGGACACCAAAGTTGTCA
CCTTCGGTGGCTTCAGAACTGATAAGTGTGTTTGTTAACTGTAAGTGGTCGTAATTCCAGAGTG
TCACAGCTTGATGTTTACCTACTTGGGTAAACTCAGGACTATTATTGTTTACCATTGTGTGTTC
ATAAATATGGTTTTAGGGGTTGGTTGGGTTTAATCCCTAGCAACATACACACATACTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCATGCATGCACACACGCACAC
ACACACACACACCAGTCCAAGCCTGTGACTATCAGGACCAAGCTATAGGAATGTGCTATAGACC
AGTGTTTAGTCAACTCCAGCTTACGTGCATCAAGAGCCTGAAAGAAAATCATGCTTTTGTATTT
ATTAATTTGTGTTTCTGTATCTCTTTTGGATCATGTATGTAATGGCAATGTTGATAGGAACCCA
CTGGAACATTCTGCAGTACCATCTCCACTGACCCTCCAGCCATGGAGAGCATTCGTGCTGACTT
GCCAGGGAGTCTTAGTTTCCGTCAGGCAAGCGTTTGTAAGCACGGACAGCTATGGGTATCCACG
TCCGGCAGGATGAAGGTAACCGTAGCCTTTGTAAAAACTGCCAAGTTGCCACATGAAGAGAAGA
CTCTTTCTCTGTTTGTTTTTGTTTTTGTTTTTTAAAGTAAGAGCTTAAAAACACAGTAGACCTG
TGAATTACCCAATCAAAACAAAAGCCCTAAAAAAGTGGCACAGAGTAAACAGGATGTGTGATGC
AGGCTTCCCTGCACTGGCTTTAACCGACTGCTGAGCGTACAGCTCCTGGGTTTATTCTGTTGTA
CAGTGGGATGATGCTTGAGTCTTGTTAACATTCGAGGCTACTTTTAATTTCTACAGTGCACTTA
GCAAATCCCAGCCAAGGACTTTATTTTTAAATTTTAGAGGAGTGACCTACAAAATAAAATATTG
GTAACCAATGCCTCCTCGGAAGCTTGCTGCCATTTCCTTTCAGGATTTGTTAAAAGACTGCAGA
GTTTATTTATTATCTTTAAAGGAAATAGTGACCCTTCGTAGGCAGGACTTCTCTTCGGGTCGTA
AAATTGTTTGGAAAAAAAACTGTAACATGAGGAATTGTTGGATGGCATGTTTGCCGCTGTTCTA
GGTGCAGAATACTAGGTAGGCGGGGGGAGGAGGGGTGCTCCACAGGAGGGGGCTTGGAAAGATC
CTTTTGCCCTGATCATCCGAAGAGAACCATCCGGAAGACTGCTTCTGGAAAACCGTCGTCCTCC
TACCTCATTGCAAGCAGCACAGGGGCCTGTGTTCACAGACCACCGAGGATTCCAGAAACTGAGA
ACAGTCTCACCTGGAAACTGTATCTGAATATTTTGCATTTAGAATATACTTTATATAAAGACAG
TCATTTAAATTTTTAATTGATGGGATTAACTTTTTATCAGACTTTTTTTGTGGGAGCAGAAGAT
CTTCAAATGGTTGTAAAATTTAAAGTGTAGACATGGCCCTTTTTATTAAGTCTGTAAGGGGACA
CCTTTCATTGTACATTTCAGACATAGCTTTGGAATAAAGTTTTCTATATTTCATTTAAA

hide sequence

RefSeq Acc Id:

XM_017592765 ⟹ XP_017448254

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	131,275,587 - 131,312,488 (-)	NCBI
mRatBN7.2	4	129,718,897 - 129,755,811 (-)	NCBI
Rnor_6.0	4	129,477,779 - 129,514,689 (-)	NCBI

Sequence:

show sequence

GAGATACCCGGCCAGGCCTGTCCTGTTCCCTAGATCCCCATGCTGGGGCGGAGTCGCTTCTCCA
GATCTTCCCCGGCCGGCACACCTGGGACCCGAGCGTCTTCTAGGACAGCAGCTCCCCCAAGCAG
CCGGGACAGGGGTTGGCTGCTGCTGGGCCTGTGGAAATCCAATCAAGCCATACACGAGTGGAGC
GCGCTTGGCCGTTTTGTGCAAGAAGACGCGGTAGCCTTGCCGAGTCTTGCCAGAGAACTCAACT
CCAAGAAGGCTTTCTGCCAGGCCCTGAAGTTGTACTTTAATGCACCATAGGGAACCCAGCGTAT
GCAAGTGGGTACGTGCCCTCCCTTGCAAAAGCCAACTGTCTGATCTGCTTCTTTAGATTTTCCC
CATGGCTAAGGGTTACTTTTTTCCATGAATGGTCAAGTTTTGTTAACCAGCAGAACGCATTGCA
GAGCCGTGGATTTGGATAACCGAAATTCTGGACCTACTCTTCCTAGCAGTGACTTAGAGGGTCT
GCAGGTTGCTATGTTAATGCTGCTTGTCTTTGGAGTACTGCTTCATGAAGTCCCCCTGAGTGGC
CAGGACGAGGCTCATCCTGAGGCTGACAGAGTGCCCGGCGAAGCCCTCTATGACTACTCCAGCC
TCCGCCTCCCAGAGGAGCACATTCCCTTCTTCCTGCACAGTAACAGGCATGTTGCCTCTGTGTG
CAGGGAGGATTCCCACTGTCCGTATAAGAAACACTTAGAGAGTCTAAATTCCTGCTGGGGGTAT
GAGAAGTCCTGCACACCAGAGTCTAGATTTGGCTCCCCCATTTGCAGCTATGTGGACTTGGGAT
GGACCGACACCCTGGAGTCAGCCCAGGACATGTTCTGGAAACAAGCTGACTTCGGATATGCTCG
GGAGCGGCTGGAGGAGATACGAATGTTCTGCCGGCCAGAGAGTGCGAGCGACTCAAGTCTGCTT
TGCTCTCGTTACCTTCAGTATTGTAGAGCTACTGGTCTATACCTGGACTTAAGAAACATCAAGA
GAAACCATGACAGATTCAAGGAAGATTTTCTTCAGGGTGGTGATATTGGAGGATACTGTAAACT
TGACCGTCATGCACTGGTGTCTGAAGGTCAGCGCAAAAGCCCTCTGCAGTCTTGGTTTGCTGAG
CTACAAGGCTACACTCAGCTCAATTTCAGGCCTATAGAAGATGCTAAATGTGACATCGTTGTTG
AAAAACCAACATATTTTATGAAATTAGATGCAGGTATTAACATGTACCACCACTTTTGTGACTT
CCTGAATCTCTACCTCACTCAGCACATAAACAATTCTTTCAGTACAGACGTGTACATTGTCATG
TGGGACACCAGCTCTTATGGATACGGTGACCTCTTCTCTGATACCTGGAAAGCATTTACTGACT
ATGACGTCATACATTTGAAAACCTACGATTCCAAAAAGGTGTGTTTTAAAGAAGCTGTGTTTTC
GTTGCTGCCCCGCATGCGGTACGGGCTGTTCTATAACACGCCTCTGATCTCTGGCTGTCAGAAC
ACTGGGTTATTCAGGGCCTTCTCCCAGCACGTGCTGCACAGGCTGAACATCTCTCAAGAGGGAC
CCAAGGATGGGAAACTTCGAGTTACCATTCTTGCACGCAGCACAGAATACCGGAAAATCCTGAA
CCAAAATGAGCTGGTAAATGCCCTGAAAACAGTATCCACATTTGAAGTCCGGGTGGTTGATTAC
AAGTACAGAGAACTCGGGTTTTTAGATCAGCTAAGGATCACGCACAACACGGACATATTTATCG
GCATGCACGGAGCTGGTCTTACCCACTTACTTTTCCTTCCAGACTGGGCTGCTGTATTCGAGCT
GTACAACTGTGAGGATGAGCGCTGTTACTTAGACCTGGCCAGGCTCAGAGGCATCTACTACATC
ACCTGGCAGAAGCCCAGCAAAGTGTTTCCTCAAGATAAGGGGCACCATCCAACTCTGGGGGAGC
ACCCGAAGTTTACCAACTACTCTTTCGACGTAGAGGAATTCATGTACCTTGTCCTGCAGGCTGC
AGAACATGTACTGCAGCACCCGCAGTGGCCGTTGAAGAAGAACCACGATGAACTATAGAAATGC
CCAGGTTGTTTACCACGGTGTTGGACACTCCCACAGGCAGACACACAATCAAAGGAGCAGAACA
ACCTCTCATATCCTACTGTAAGATGATTCACGGACTTTACTTCTGAACGTAGCTCAGGCTGGTC
TTGAACTCATGATCCCCTTGCCTCAGCCAGCTGAGCACTCAGCTTACAGATGAGCACGACCACG
CCTGTCTACAGAATCACCTTTTCGTGTGAAAGCGCACCTTCAGGGTACTTTAAGTCTCCCCCAT
GTCTCTCGTGTCCTGGCTATTTATCAGCAGTATTTTTGCACTGAAAAAAAAATGTTACTTTTAT
AGTTTAGAGCTGGGCAGATGCCCATTGGTGTAGCTGAGCTTTCCAGTTGGGACACCAAAGTTGT
CACCTTCGGTGGCTTCAGAACTGATAAGTGTGTTTGTTAACTGTAAGTGGTCGTAATTCCAGAG
TGTCACAGCTTGATGTTTACCTACTTGGGTAAACTCAGGACTATTATTGTTTACCATTGTGTGT
TCATAAATATGGTTTTAGGGGTTGGTTGGGTTTAATCCCTAGCAACATACACACATACTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCATGCATGCACACACGCAC
ACACACACACACACCAGTCCAAGCCTGTGACTATCAGGACCAAGCTATAGGAATGTGCTATAGA
CCAGTGTTTAGTCAACTCCAGCTTACGTGCATCAAGAGCCTGAAAGAAAATCATGCTTTTGTAT
TTATTAATTTGTGTTTCTGTATCTCTTTTGGATCATGTATGTAATGGCAATGTTGATAGGAACC
CACTGGAACATTCTGCAGTACCATCTCCACTGACCCTCCAGCCATGGAGAGCATTCGTGCTGAC
TTGCCAGGGAGTCTTAGTTTCCGTCAGGCAAGCGTTTGTAAGCACGGACAGCTATGGGTATCCA
CGTCCGGCAGGATGAAGGTAACCGTAGCCTTTGTAAAAACTGCCAAGTTGCCACATGAAGAGAA
GACTCTTTCTCTGTTTGTTTTTGTTTTTGTTTTTTAAAGTAAGAGCTTAAAAACACAGTAGACC
TGTGAATTACCCAATCAAAACAAAAGCCCTAAAAAAGTGGCACAGAGTAAACAGGATGTGTGAT
GCAGGCTTCCCTGCACTGGCTTTAACCGACTGCTGAGCGTACAGCTCCTGGGTTTATTCTGTTG
TACAGTGGGATGATGCTTGAGTCTTGTTAACATTCGAGGCTACTTTTAATTTCTACAGTGCACT
TAGCAAATCCCAGCCAAGGACTTTATTTTTAAATTTTAGAGGAGTGACCTACAAAATAAAATAT
TGGTAACCAATGCCTCCTCGGAAGCTTGCTGCCATTTCCTTTCAGGATTTGTTAAAAGACTGCA
GAGTTTATTTATTATCTTTAAAGGAAATAGTGACCCTTCGTAGGCAGGACTTCTCTTCGGGTCG
TAAAATTGTTTGGAAAAAAAACTGTAACATGAGGAATTGTTGGATGGCATGTTTGCCGCTGTTC
TAGGTGCAGAATACTAGGTAGGCGGGGGGAGGAGGGGTGCTCCACAGGAGGGGGCTTGGAAAGA
TCCTTTTGCCCTGATCATCCGAAGAGAACCATCCGGAAGACTGCTTCTGGAAAACCGTCGTCCT
CCTACCTCATTGCAAGCAGCACAGGGGCCTGTGTTCACAGACCACCGAGGATTCCAGAAACTGA
GAACAGTCTCACCTGGAAACTGTATCTGAATATTTTGCATTTAGAATATACTTTATATAAAGAC
AGTCATTTAAATTTTTAATTGATGGGATTAACTTTTTATCAGACTTTTTTTGTGGGAGCAGAAG
ATCTTCAAATGGTTGTAAAATTTAAAGTGTAGACATGGCCCTTTTTATTAAGTCTGTAAGGGGA
CACCTTTCATTGTACATTTCAGACATAGCTTTGGAATAAAGTTTTCTATATTTCATTTAAA

hide sequence

RefSeq Acc Id:

XM_017592766 ⟹ XP_017448255

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	131,275,587 - 131,312,772 (-)	NCBI
mRatBN7.2	4	129,718,897 - 129,756,106 (-)	NCBI
Rnor_6.0	4	129,477,779 - 129,514,977 (-)	NCBI

Sequence:

show sequence

CGCCCTTGAGCCCGGAGCCAAGGTGTCGTGTCTGCTCCCGGGCGCCCCCTGGCCCGACTTGGGC
GCCGGAGGTTTCCGGTTCGCGGCCGCCGGCGGTGACGTCTCGTTTGCTCCCGAGCCGCCCGCGC
CGCCGCTCCCTAGCCAAGCTGCAGGCCTGTGGAAATCCAATCAAGCCATACACGAGTGGAGCGC
GCTTGGCCGTTTTGTGCAAGAAGACGCGGTAGCCTTGCCGAGTCTTGCCAGAGAACTCAACTCC
AAGAAGGCTTTCTGCCAGGCCCTGAAGTTGTACTTTAATGCACCATAGGGAACCCAGCGTATGC
AAGTGGGTCTGCAGGTTGCTATGTTAATGCTGCTTGTCTTTGGAGTACTGCTTCATGAAGTCCC
CCTGAGTGGCCAGGACGAGGCTCATCCTGAGGCTGACAGAGTGCCCGGCGAAGCCCTCTATGAC
TACTCCAGCCTCCGCCTCCCAGAGGAGCACATTCCCTTCTTCCTGCACAGTAACAGGCATGTTG
CCTCTGTGTGCAGGGAGGATTCCCACTGTCCGTATAAGAAACACTTAGAGAGTCTAAATTCCTG
CTGGGGGTATGAGAAGTCCTGCACACCAGAGTCTAGATTTGGCTCCCCCATTTGCAGCTATGTG
GACTTGGGATGGACCGACACCCTGGAGTCAGCCCAGGACATGTTCTGGAAACAAGCTGACTTCG
GATATGCTCGGGAGCGGCTGGAGGAGATACGAATGTTCTGCCGGCCAGAGAGTGCGAGCGACTC
AAGTCTGCTTTGCTCTCGTTACCTTCAGTATTGTAGAGCTACTGGTCTATACCTGGACTTAAGA
AACATCAAGAGAAACCATGACAGATTCAAGGAAGATTTTCTTCAGGGTGGTGATATTGGAGGAT
ACTGTAAACTTGACCGTCATGCACTGGTGTCTGAAGGTCAGCGCAAAAGCCCTCTGCAGTCTTG
GTTTGCTGAGCTACAAGGCTACACTCAGCTCAATTTCAGGCCTATAGAAGATGCTAAATGTGAC
ATCGTTGTTGAAAAACCAACATATTTTATGAAATTAGATGCAGGTATTAACATGTACCACCACT
TTTGTGACTTCCTGAATCTCTACCTCACTCAGCACATAAACAATTCTTTCAGTACAGACGTGTA
CATTGTCATGTGGGACACCAGCTCTTATGGATACGGTGACCTCTTCTCTGATACCTGGAAAGCA
TTTACTGACTATGACGTCATACATTTGAAAACCTACGATTCCAAAAAGGTGTGTTTTAAAGAAG
CTGTGTTTTCGTTGCTGCCCCGCATGCGGTACGGGCTGTTCTATAACACGCCTCTGATCTCTGG
CTGTCAGAACACTGGGTTATTCAGGGCCTTCTCCCAGCACGTGCTGCACAGGCTGAACATCTCT
CAAGAGGGACCCAAGGATGGGAAACTTCGAGTTACCATTCTTGCACGCAGCACAGAATACCGGA
AAATCCTGAACCAAAATGAGCTGGTAAATGCCCTGAAAACAGTATCCACATTTGAAGTCCGGGT
GGTTGATTACAAGTACAGAGAACTCGGGTTTTTAGATCAGCTAAGGATCACGCACAACACGGAC
ATATTTATCGGCATGCACGGAGCTGGTCTTACCCACTTACTTTTCCTTCCAGACTGGGCTGCTG
TATTCGAGCTGTACAACTGTGAGGATGAGCGCTGTTACTTAGACCTGGCCAGGCTCAGAGGCAT
CTACTACATCACCTGGCAGAAGCCCAGCAAAGTGTTTCCTCAAGATAAGGGGCACCATCCAACT
CTGGGGGAGCACCCGAAGTTTACCAACTACTCTTTCGACGTAGAGGAATTCATGTACCTTGTCC
TGCAGGCTGCAGAACATGTACTGCAGCACCCGCAGTGGCCGTTGAAGAAGAACCACGATGAACT
ATAGAAATGCCCAGGTTGTTTACCACGGTGTTGGACACTCCCACAGGCAGACACACAATCAAAG
GAGCAGAACAACCTCTCATATCCTACTGTAAGATGATTCACGGACTTTACTTCTGAACGTAGCT
CAGGCTGGTCTTGAACTCATGATCCCCTTGCCTCAGCCAGCTGAGCACTCAGCTTACAGATGAG
CACGACCACGCCTGTCTACAGAATCACCTTTTCGTGTGAAAGCGCACCTTCAGGGTACTTTAAG
TCTCCCCCATGTCTCTCGTGTCCTGGCTATTTATCAGCAGTATTTTTGCACTGAAAAAAAAATG
TTACTTTTATAGTTTAGAGCTGGGCAGATGCCCATTGGTGTAGCTGAGCTTTCCAGTTGGGACA
CCAAAGTTGTCACCTTCGGTGGCTTCAGAACTGATAAGTGTGTTTGTTAACTGTAAGTGGTCGT
AATTCCAGAGTGTCACAGCTTGATGTTTACCTACTTGGGTAAACTCAGGACTATTATTGTTTAC
CATTGTGTGTTCATAAATATGGTTTTAGGGGTTGGTTGGGTTTAATCCCTAGCAACATACACAC
ATACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCATGCATGC
ACACACGCACACACACACACACACCAGTCCAAGCCTGTGACTATCAGGACCAAGCTATAGGAAT
GTGCTATAGACCAGTGTTTAGTCAACTCCAGCTTACGTGCATCAAGAGCCTGAAAGAAAATCAT
GCTTTTGTATTTATTAATTTGTGTTTCTGTATCTCTTTTGGATCATGTATGTAATGGCAATGTT
GATAGGAACCCACTGGAACATTCTGCAGTACCATCTCCACTGACCCTCCAGCCATGGAGAGCAT
TCGTGCTGACTTGCCAGGGAGTCTTAGTTTCCGTCAGGCAAGCGTTTGTAAGCACGGACAGCTA
TGGGTATCCACGTCCGGCAGGATGAAGGTAACCGTAGCCTTTGTAAAAACTGCCAAGTTGCCAC
ATGAAGAGAAGACTCTTTCTCTGTTTGTTTTTGTTTTTGTTTTTTAAAGTAAGAGCTTAAAAAC
ACAGTAGACCTGTGAATTACCCAATCAAAACAAAAGCCCTAAAAAAGTGGCACAGAGTAAACAG
GATGTGTGATGCAGGCTTCCCTGCACTGGCTTTAACCGACTGCTGAGCGTACAGCTCCTGGGTT
TATTCTGTTGTACAGTGGGATGATGCTTGAGTCTTGTTAACATTCGAGGCTACTTTTAATTTCT
ACAGTGCACTTAGCAAATCCCAGCCAAGGACTTTATTTTTAAATTTTAGAGGAGTGACCTACAA
AATAAAATATTGGTAACCAATGCCTCCTCGGAAGCTTGCTGCCATTTCCTTTCAGGATTTGTTA
AAAGACTGCAGAGTTTATTTATTATCTTTAAAGGAAATAGTGACCCTTCGTAGGCAGGACTTCT
CTTCGGGTCGTAAAATTGTTTGGAAAAAAAACTGTAACATGAGGAATTGTTGGATGGCATGTTT
GCCGCTGTTCTAGGTGCAGAATACTAGGTAGGCGGGGGGAGGAGGGGTGCTCCACAGGAGGGGG
CTTGGAAAGATCCTTTTGCCCTGATCATCCGAAGAGAACCATCCGGAAGACTGCTTCTGGAAAA
CCGTCGTCCTCCTACCTCATTGCAAGCAGCACAGGGGCCTGTGTTCACAGACCACCGAGGATTC
CAGAAACTGAGAACAGTCTCACCTGGAAACTGTATCTGAATATTTTGCATTTAGAATATACTTT
ATATAAAGACAGTCATTTAAATTTTTAATTGATGGGATTAACTTTTTATCAGACTTTTTTTGTG
GGAGCAGAAGATCTTCAAATGGTTGTAAAATTTAAAGTGTAGACATGGCCCTTTTTATTAAGTC
TGTAAGGGGACACCTTTCATTGTACATTTCAGACATAGCTTTGGAATAAAGTTTTCTATATTTC
ATTTAAA

hide sequence

RefSeq Acc Id:

XM_039108043 ⟹ XP_038963971

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	131,275,587 - 131,312,772 (-)	NCBI
mRatBN7.2	4	129,718,897 - 129,756,106 (-)	NCBI

RefSeq Acc Id:

XM_039108044 ⟹ XP_038963972

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	131,275,587 - 131,300,809 (-)	NCBI
mRatBN7.2	4	129,718,897 - 129,744,129 (-)	NCBI

RefSeq Acc Id:

XM_063286446 ⟹ XP_063142516

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	131,275,587 - 131,312,680 (-)	NCBI

RefSeq Acc Id:

XM_063286447 ⟹ XP_063142517

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	131,275,587 - 131,312,619 (-)	NCBI

RefSeq Acc Id:

XM_063286449 ⟹ XP_063142519

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	131,275,587 - 131,312,772 (-)	NCBI

RefSeq Acc Id:

XM_063286450 ⟹ XP_063142520

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	131,275,587 - 131,311,668 (-)	NCBI

RefSeq Acc Id:

XM_063286451 ⟹ XP_063142521

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	131,285,648 - 131,312,772 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001009502	(Get FASTA)	NCBI Sequence Viewer
	XP_008761367	(Get FASTA)	NCBI Sequence Viewer
	XP_017448253	(Get FASTA)	NCBI Sequence Viewer
	XP_017448254	(Get FASTA)	NCBI Sequence Viewer
	XP_017448255	(Get FASTA)	NCBI Sequence Viewer
	XP_038963971	(Get FASTA)	NCBI Sequence Viewer
	XP_038963972	(Get FASTA)	NCBI Sequence Viewer
	XP_063142516	(Get FASTA)	NCBI Sequence Viewer
	XP_063142517	(Get FASTA)	NCBI Sequence Viewer
	XP_063142519	(Get FASTA)	NCBI Sequence Viewer
	XP_063142520	(Get FASTA)	NCBI Sequence Viewer
	XP_063142521	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	CAI30571	(Get FASTA)	NCBI Sequence Viewer
	EDL91420	(Get FASTA)	NCBI Sequence Viewer
	EDL91421	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000073147
	ENSRNOP00000105223
	ENSRNOP00000105600
GenBank Protein	Q5NDL0	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001009502 ⟸ NM_001009502
- Peptide Label:	precursor
- UniProtKB:	Q5NDL0 (UniProtKB/Swiss-Prot), A6IBF3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLMLLVFGVLLHEVPLSGQDEAHPEADRVPGEALYDYSSLRLPEEHIPFFLHSNRHVASVCRED SHCPYKKHLESLNSCWGYEKSCTPESRFGSPICSYVDLGWTDTLESAQDMFWKQADFGYARERL EEIRMFCRPESASDSSLLCSRYLQYCRATGLYLDLRNIKRNHDRFKEDFLQGGDIGGYCKLDRH ALVSEGQRKSPLQSWFAELQGYTQLNFRPIEDAKCDIVVEKPTYFMKLDAGINMYHHFCDFLNL YLTQHINNSFSTDVYIVMWDTSSYGYGDLFSDTWKAFTDYDVIHLKTYDSKKVCFKEAVFSLLP RMRYGLFYNTPLISGCQNTGLFRAFSQHVLHRLNISQEGPKDGKLRVTILARSTEYRKILNQNE LVNALKTVSTFEVRVVDYKYRELGFLDQLRITHNTDIFIGMHGAGLTHLLFLPDWAAVFELYNC EDERCYLDLARLRGIYYITWQKPSKVFPQDKGHHPTLGEHPKFTNYSFDVEEFMYLVLQAAEHV LQHPQWPLKKNHDEL hide sequence

RefSeq Acc Id:	XP_008761367 ⟸ XM_008763145
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K4R9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQVVLLTSRTHCRAVDLDNRNSGPTLPSSDLEGLQVAMLMLLVFGVLLHEVPLSGQDEAHPEAD RVPGEALYDYSSLRLPEEHIPFFLHSNRHVASVCREDSHCPYKKHLESLNSCWGYEKSCTPESR FGSPICSYVDLGWTDTLESAQDMFWKQADFGYARERLEEIRMFCRPESASDSSLLCSRYLQYCR ATGLYLDLRNIKRNHDRFKEDFLQGGDIGGYCKLDRHALVSEGQRKSPLQSWFAELQGYTQLNF RPIEDAKCDIVVEKPTYFMKLDAGINMYHHFCDFLNLYLTQHINNSFSTDVYIVMWDTSSYGYG DLFSDTWKAFTDYDVIHLKTYDSKKVCFKEAVFSLLPRMRYGLFYNTPLISGCQNTGLFRAFSQ HVLHRLNISQEGPKDGKLRVTILARSTEYRKILNQNELVNALKTVSTFEVRVVDYKYRELGFLD QLRITHNTDIFIGMHGAGLTHLLFLPDWAAVFELYNCEDERCYLDLARLRGIYYITWQKPSKVF PQDKGHHPTLGEHPKFTNYSFDVEEFMYLVLQAAEHVLQHPQWPLKKNHDEL hide sequence

RefSeq Acc Id:

XP_017448255 ⟸ XM_017592766

- Peptide Label:

isoform X4

- Sequence:

show sequence

MQVGLQVAMLMLLVFGVLLHEVPLSGQDEAHPEADRVPGEALYDYSSLRLPEEHIPFFLHSNRH
VASVCREDSHCPYKKHLESLNSCWGYEKSCTPESRFGSPICSYVDLGWTDTLESAQDMFWKQAD
FGYARERLEEIRMFCRPESASDSSLLCSRYLQYCRATGLYLDLRNIKRNHDRFKEDFLQGGDIG
GYCKLDRHALVSEGQRKSPLQSWFAELQGYTQLNFRPIEDAKCDIVVEKPTYFMKLDAGINMYH
HFCDFLNLYLTQHINNSFSTDVYIVMWDTSSYGYGDLFSDTWKAFTDYDVIHLKTYDSKKVCFK
EAVFSLLPRMRYGLFYNTPLISGCQNTGLFRAFSQHVLHRLNISQEGPKDGKLRVTILARSTEY
RKILNQNELVNALKTVSTFEVRVVDYKYRELGFLDQLRITHNTDIFIGMHGAGLTHLLFLPDWA
AVFELYNCEDERCYLDLARLRGIYYITWQKPSKVFPQDKGHHPTLGEHPKFTNYSFDVEEFMYL
VLQAAEHVLQHPQWPLKKNHDEL

hide sequence

RefSeq Acc Id:	XP_017448253 ⟸ XM_017592764
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K4R9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNGQVLLTSRTHCRAVDLDNRNSGPTLPSSDLEGLQVAMLMLLVFGVLLHEVPLSGQDEAHPEA DRVPGEALYDYSSLRLPEEHIPFFLHSNRHVASVCREDSHCPYKKHLESLNSCWGYEKSCTPES RFGSPICSYVDLGWTDTLESAQDMFWKQADFGYARERLEEIRMFCRPESASDSSLLCSRYLQYC RATGLYLDLRNIKRNHDRFKEDFLQGGDIGGYCKLDRHALVSEGQRKSPLQSWFAELQGYTQLN FRPIEDAKCDIVVEKPTYFMKLDAGINMYHHFCDFLNLYLTQHINNSFSTDVYIVMWDTSSYGY GDLFSDTWKAFTDYDVIHLKTYDSKKVCFKEAVFSLLPRMRYGLFYNTPLISGCQNTGLFRAFS QHVLHRLNISQEGPKDGKLRVTILARSTEYRKILNQNELVNALKTVSTFEVRVVDYKYRELGFL DQLRITHNTDIFIGMHGAGLTHLLFLPDWAAVFELYNCEDERCYLDLARLRGIYYITWQKPSKV FPQDKGHHPTLGEHPKFTNYSFDVEEFMYLVLQAAEHVLQHPQWPLKKNHDEL hide sequence

RefSeq Acc Id:	XP_017448254 ⟸ XM_017592765
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K4R9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNGQVLLTSRTHCRAVDLDNRNSGPTLPSSDLEGLQVAMLMLLVFGVLLHEVPLSGQDEAHPEA DRVPGEALYDYSSLRLPEEHIPFFLHSNRHVASVCREDSHCPYKKHLESLNSCWGYEKSCTPES RFGSPICSYVDLGWTDTLESAQDMFWKQADFGYARERLEEIRMFCRPESASDSSLLCSRYLQYC RATGLYLDLRNIKRNHDRFKEDFLQGGDIGGYCKLDRHALVSEGQRKSPLQSWFAELQGYTQLN FRPIEDAKCDIVVEKPTYFMKLDAGINMYHHFCDFLNLYLTQHINNSFSTDVYIVMWDTSSYGY GDLFSDTWKAFTDYDVIHLKTYDSKKVCFKEAVFSLLPRMRYGLFYNTPLISGCQNTGLFRAFS QHVLHRLNISQEGPKDGKLRVTILARSTEYRKILNQNELVNALKTVSTFEVRVVDYKYRELGFL DQLRITHNTDIFIGMHGAGLTHLLFLPDWAAVFELYNCEDERCYLDLARLRGIYYITWQKPSKV FPQDKGHHPTLGEHPKFTNYSFDVEEFMYLVLQAAEHVLQHPQWPLKKNHDEL hide sequence

Ensembl Acc Id:

ENSRNOP00000073147 ⟸ ENSRNOT00000077530

Ensembl Acc Id:

ENSRNOP00000034561 ⟸ ENSRNOT00000039353

RefSeq Acc Id:	XP_038963971 ⟸ XM_039108043
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038963972 ⟸ XM_039108044
- Peptide Label:	isoform X7

Ensembl Acc Id:

ENSRNOP00000081702 ⟸ ENSRNOT00000115685

RefSeq Acc Id:	XP_063142519 ⟸ XM_063286449
- Peptide Label:	isoform X5
- UniProtKB:	Q5NDL0 (UniProtKB/Swiss-Prot), A6IBF3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142516 ⟸ XM_063286446
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063142517 ⟸ XM_063286447
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063142520 ⟸ XM_063286450
- Peptide Label:	isoform X5
- UniProtKB:	Q5NDL0 (UniProtKB/Swiss-Prot), A6IBF3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142521 ⟸ XM_063286451
- Peptide Label:	isoform X6

Ensembl Acc Id:

ENSRNOP00000105600 ⟸ ENSRNOT00000154943

Ensembl Acc Id:

ENSRNOP00000106888 ⟸ ENSRNOT00000125432

Ensembl Acc Id:

ENSRNOP00000105223 ⟸ ENSRNOT00000130855

Protein Domains

Glycosyltransferase 61 catalytic

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5NDL0-F1-model_v2	AlphaFold	Q5NDL0	1-527	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693265

Promoter ID:

EPDNEW_R3790

Type:

multiple initiation site

Name:

Eogt_1

Description:

EGF domain specific O-linked N-acetylglucosamine transferase

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	4	129,514,872 - 129,514,932	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1359357	AgrOrtholog
BioCyc Gene	G2FUF-43608	BioCyc
Ensembl Genes	ENSRNOG00000024533	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000077530	ENTREZGENE
	ENSRNOT00000130855	ENTREZGENE
	ENSRNOT00000154943	ENTREZGENE
InterPro	Glyco_transf_61_cat	UniProtKB/Swiss-Prot
	Glycosyltransferase_61	UniProtKB/Swiss-Prot
KEGG Report	rno:494219	UniProtKB/Swiss-Prot
NCBI Gene	494219	ENTREZGENE
PANTHER	EGF DOMAIN-SPECIFIC O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE	UniProtKB/Swiss-Prot
	PTHR20961	UniProtKB/Swiss-Prot
Pfam	DUF563	UniProtKB/Swiss-Prot
PhenoGen	Eogt	PhenoGen
PROSITE	ER_TARGET	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000024533	RatGTEx
UniProt	A0A0G2K4R9	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LUG4_RAT	UniProtKB/TrEMBL
	A0ABK0LWQ2_RAT	UniProtKB/TrEMBL
	A0ABK0LXF0_RAT	UniProtKB/TrEMBL
	A6IBF3	ENTREZGENE, UniProtKB/TrEMBL
	EOGT_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-04-13	Eogt	EGF domain specific O-linked N-acetylglucosamine transferase	Eogt	EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-07-13	Eogt	EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase	Aer61	glycosyltransferase Aer61	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-07-29	Aer61	glycosyltransferase Aer61			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - CTD

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