Nudt5 (nudix hydrolase 5) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Nudt5 (nudix hydrolase 5) Rattus norvegicus
Analyze
Symbol: Nudt5
Name: nudix hydrolase 5
RGD ID: 1359284
Description: Predicted to enable several functions, including magnesium ion binding activity; protein homodimerization activity; and pyrophosphatase activity. Predicted to be involved in D-ribose catabolic process; chromatin remodeling; and nucleoside phosphate metabolic process. Predicted to act upstream of or within nucleobase-containing compound metabolic process. Predicted to be active in nucleus. Orthologous to human NUDT5 (nudix hydrolase 5); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 8-oxo-dGDP phosphatase; ADP-sugar pyrophosphatase; MGC94209; nuclear ATP-synthesis protein NUDIX5; nucleoside diphosphate-linked moiety X motif 5; nudix (nucleoside diphosphate linked moiety X)-type motif 5; nudix motif 5; nudix-type motif 5
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81777,345,041 - 77,368,308 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1777,345,045 - 77,368,308 (-)EnsemblGRCr8
mRatBN7.21772,435,690 - 72,459,008 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1772,435,697 - 72,459,001 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1775,941,724 - 75,964,783 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01779,763,182 - 79,786,241 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01773,813,441 - 73,836,500 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01776,387,027 - 76,410,309 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1776,387,031 - 76,410,294 (-)Ensemblrn6Rnor6.0
Rnor_5.01778,043,450 - 78,066,592 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41783,496,937 - 83,520,204 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1771,885,608 - 71,908,867 (-)NCBICelera
RGSC_v3.11783,507,773 - 83,531,037 (-)NCBI
Cytogenetic Map17q12.3NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleus  (IBA,IEA,ISO,ISS)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
8. Cloning and characterization of a new member of the Nudix hydrolases from human and mouse. Yang H, etal., J Biol Chem 2000 Mar 24;275(12):8844-53.
Additional References at PubMed
PMID:10567213   PMID:15489334   PMID:17052728   PMID:18462755   PMID:19056867   PMID:19699693   PMID:21070968   PMID:21389046   PMID:21630459   PMID:23376485   PMID:27257257   PMID:31505169  
PMID:31904090  


Genomics

Comparative Map Data
Nudt5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81777,345,041 - 77,368,308 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1777,345,045 - 77,368,308 (-)EnsemblGRCr8
mRatBN7.21772,435,690 - 72,459,008 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1772,435,697 - 72,459,001 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1775,941,724 - 75,964,783 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01779,763,182 - 79,786,241 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01773,813,441 - 73,836,500 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01776,387,027 - 76,410,309 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1776,387,031 - 76,410,294 (-)Ensemblrn6Rnor6.0
Rnor_5.01778,043,450 - 78,066,592 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41783,496,937 - 83,520,204 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1771,885,608 - 71,908,867 (-)NCBICelera
RGSC_v3.11783,507,773 - 83,531,037 (-)NCBI
Cytogenetic Map17q12.3NCBI
NUDT5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381012,165,330 - 12,195,891 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1012,165,328 - 12,196,127 (-)Ensemblhg38GRCh38
GRCh371012,207,329 - 12,237,890 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361012,249,579 - 12,278,149 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341012,249,579 - 12,278,149NCBI
Celera1012,139,104 - 12,167,676 (-)NCBICelera
Cytogenetic Map10p14NCBI
HuRef1012,126,113 - 12,154,585 (-)NCBIHuRef
CHM1_11012,209,568 - 12,238,155 (-)NCBICHM1_1
T2T-CHM13v2.01012,176,604 - 12,207,161 (-)NCBIT2T-CHM13v2.0
Nudt5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3925,849,839 - 5,875,631 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl25,849,830 - 5,876,706 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm3825,845,034 - 5,870,820 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl25,845,019 - 5,871,895 (+)Ensemblmm10GRCm38
MGSCv3725,766,080 - 5,789,782 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv3625,762,306 - 5,786,008 (+)NCBIMGSCv36mm8
Celera25,796,081 - 5,819,835 (+)NCBICelera
Cytogenetic Map2A1NCBI
cM Map23.62NCBI
Nudt5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955462190,999 - 203,736 (-)Ensembl
ChiLan1.0NW_004955462190,872 - 211,975 (-)NCBIChiLan1.0ChiLan1.0
NUDT5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2824,699,928 - 24,728,195 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11024,705,260 - 24,733,527 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01012,177,922 - 12,206,435 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11012,155,747 - 12,186,679 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1012,158,106 - 12,176,533 (-)EnsemblpanPan2panpan1.1
NUDT5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1224,239,632 - 24,266,763 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl224,239,627 - 24,264,469 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha221,264,305 - 21,291,440 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0224,610,542 - 24,637,704 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl224,610,578 - 24,636,671 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1221,738,034 - 21,765,080 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0222,580,389 - 22,607,450 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0223,295,525 - 23,322,665 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Nudt5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934426,983,696 - 27,004,087 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364843,156,586 - 3,169,146 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364843,148,955 - 3,169,527 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NUDT5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1059,765,703 - 59,790,157 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11059,765,444 - 59,787,773 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21065,552,312 - 65,574,261 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NUDT5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1912,218,466 - 12,247,129 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605117,722,354 - 17,753,197 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nudt5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248054,903,373 - 4,915,846 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248054,903,250 - 4,922,719 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Nudt5
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11412,170,309 - 12,183,716 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Nudt5
166 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:69
Count of miRNA genes:59
Interacting mature miRNAs:65
Transcripts:ENSRNOT00000023892
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
152023626Bp403Blood pressure QTL 4033.86arterial blood pressure trait (VT:2000000)172413612784432719Rat
2301412Kidm40Kidney mass QTL 400.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)174238816487388164Rat
631502Cm26Cardiac mass QTL 263.71heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)177061350286062352Rat
1354588Bvd4Brain ventricular dilatation QTL 45.310.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)175819406487388164Rat
9590107Sffal7Serum free fatty acids level QTL 74.810.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)173310464578104645Rat
1354654Spl7Serum phospholipid level QTL 75.5blood phospholipid amount (VT:0006084)blood phospholipid level (CMO:0001169)173803135483031354Rat
2317038Ginf3Gastrointestinal inflammation QTL 32.890.005liver integrity trait (VT:0010547)liver granuloma severity score (CMO:0002157)175482950393515804Rat
1598871Memor5Memory QTL 55.3exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)174096801789341781Rat
1581512Cm55Cardiac mass QTL 552.80.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172723344583975845Rat
1354629Scl31Serum cholesterol level QTL 314.1blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)173803135483031354Rat
152025238Slep14Serum leptin concentration QTL 144.62blood leptin amount (VT:0005667)172439059584432719Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)173803135483031354Rat
61466Niddm12Non-insulin dependent diabetes mellitus QTL 123.20.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)176515487293515804Rat
1354635Bp245Blood pressure QTL 2456arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)173803135483031354Rat
8552928Pigfal9Plasma insulin-like growth factor 1 level QTL 99blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)173310464578104645Rat
12904736Cm121Cardiac mass QTL 1210.043heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)174238816487388164Rat
1300148Bp192Blood pressure QTL 1923.47arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)174605012691050126Rat
4889894Eae33Experimental allergic encephalomyelitis QTL 335.20.0001nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)175560459793006569Rat
2324621Coatc5Coat color QTL 5coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)174265489587654895Rat
1354619Bp242Blood pressure QTL 2426.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)173768787782687877Rat
1300131Bp193Blood pressure QTL 1933.3arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)176855004093515804Rat
7488963Bp369Blood pressure QTL 3690.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)176369714782818564Rat
1300129Rf25Renal function QTL 253.03blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)174106235286062352Rat
152023740Bp406Blood pressure QTL 4066.06arterial blood pressure trait (VT:2000000)172413612784432719Rat
1354663Bvd5Brain ventricular dilatation QTL 53.510.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)173219953486201342Rat
152023737Bp405Blood pressure QTL 4055.06arterial blood pressure trait (VT:2000000)2413612784432719Rat
152023736Bp404Blood pressure QTL 4043.78arterial blood pressure trait (VT:2000000)172413612784432719Rat
724528Uae4Urinary albumin excretion QTL 44.90.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)173604553781045537Rat
2302365Gluco40Glucose level QTL 404.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)176456982086954580Rat

Markers in Region
RH127877  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2837,400,148 - 37,400,315 (+)MAPPERmRatBN7.2
Rnor_6.0840,159,907 - 40,160,073NCBIRnor6.0
Rnor_5.0840,160,731 - 40,160,897UniSTSRnor5.0
RGSC_v3.4838,935,630 - 38,935,796UniSTSRGSC3.4
Celera837,055,126 - 37,055,292UniSTS
RH 3.4 Map8353.51UniSTS
Cytogenetic Map8q21UniSTS
Cytogenetic Map17q12.3UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 162 91 90 59 92 59 6 356 192 11 141 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000023892   ⟹   ENSRNOP00000023893
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1777,345,045 - 77,368,308 (-)Ensembl
mRatBN7.2 Ensembl1772,435,697 - 72,458,961 (-)Ensembl
Rnor_6.0 Ensembl1776,387,031 - 76,410,294 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000082669   ⟹   ENSRNOP00000075734
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1777,345,045 - 77,368,308 (-)Ensembl
mRatBN7.2 Ensembl1772,436,112 - 72,459,001 (-)Ensembl
Rnor_6.0 Ensembl1776,387,562 - 76,401,249 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000100837   ⟹   ENSRNOP00000086413
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1772,439,533 - 72,444,425 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000165716   ⟹   ENSRNOP00000107251
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1777,345,045 - 77,365,772 (-)Ensembl
RefSeq Acc Id: NM_001007733   ⟹   NP_001007734
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81777,345,041 - 77,368,308 (-)NCBI
mRatBN7.21772,435,693 - 72,458,961 (-)NCBI
Rnor_6.01776,387,027 - 76,410,294 (-)NCBI
Rnor_5.01778,043,450 - 78,066,592 (-)NCBI
RGSC_v3.41783,496,937 - 83,520,204 (-)RGD
Celera1771,885,608 - 71,908,867 (-)RGD
Sequence:
RefSeq Acc Id: XM_008771875   ⟹   XP_008770097
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81777,345,430 - 77,368,236 (-)NCBI
mRatBN7.21772,435,690 - 72,459,008 (-)NCBI
Rnor_6.01776,387,228 - 76,410,309 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001007734 (Get FASTA)   NCBI Sequence Viewer  
  XP_008770097 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH79176 (Get FASTA)   NCBI Sequence Viewer  
  EDL78658 (Get FASTA)   NCBI Sequence Viewer  
  EDL78659 (Get FASTA)   NCBI Sequence Viewer  
  EDL78660 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000075734
  ENSRNOP00000075734.1
GenBank Protein Q6AY63 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001007734   ⟸   NM_001007733
- UniProtKB: Q6AY63 (UniProtKB/Swiss-Prot),   A0A140TAD1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008770097   ⟸   XM_008771875
- Peptide Label: isoform X1
- UniProtKB: A0A140TAD1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000075734   ⟸   ENSRNOT00000082669
Ensembl Acc Id: ENSRNOP00000023893   ⟸   ENSRNOT00000023892
Ensembl Acc Id: ENSRNOP00000086413   ⟸   ENSRNOT00000100837
Ensembl Acc Id: ENSRNOP00000107251   ⟸   ENSRNOT00000165716
Protein Domains
Nudix hydrolase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6AY63-F1-model_v2 AlphaFold Q6AY63 1-219 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700573
Promoter ID:EPDNEW_R11093
Type:initiation region
Name:Nudt5_1
Description:nudix hydrolase 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01776,410,320 - 76,410,380EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1359284 AgrOrtholog
BioCyc Gene G2FUF-8706 BioCyc
Ensembl Genes ENSRNOG00000017741 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000082669 ENTREZGENE
  ENSRNOT00000082669.2 UniProtKB/Swiss-Prot
Gene3D-CATH Nucleoside Triphosphate Pyrophosphohydrolase UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7130276 IMAGE-MGC_LOAD
InterPro Nudix_hydrolase UniProtKB/Swiss-Prot
  NUDIX_hydrolase-like_dom_sf UniProtKB/Swiss-Prot
  NUDIX_hydrolase_CS UniProtKB/Swiss-Prot
  NUDIX_hydrolase_dom UniProtKB/Swiss-Prot
KEGG Report rno:361274 UniProtKB/Swiss-Prot
MGC_CLONE MGC:94209 IMAGE-MGC_LOAD
NCBI Gene 361274 ENTREZGENE
PANTHER ADP-SUGAR PYROPHOSPHATASE UniProtKB/Swiss-Prot
  UDP/ADP-SUGAR PYROPHOSPHATASE UniProtKB/Swiss-Prot
Pfam NUDIX UniProtKB/Swiss-Prot
PhenoGen Nudt5 PhenoGen
PRINTS NUDIXFAMILY UniProtKB/Swiss-Prot
PROSITE NUDIX UniProtKB/Swiss-Prot
  NUDIX_BOX UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000017741 RatGTEx
Superfamily-SCOP SSF55811 UniProtKB/Swiss-Prot
UniProt A0A140TAD1 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LQJ1_RAT UniProtKB/TrEMBL
  A6JLY1_RAT UniProtKB/TrEMBL
  A6JLY3_RAT UniProtKB/TrEMBL
  NUDT5_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-10 Nudt5  nudix hydrolase 5  Nudt5  nudix (nucleoside diphosphate linked moiety X)-type motif 5  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Nudt5  nudix (nucleoside diphosphate linked moiety X)-type motif 5    nudix-type motif 5  Name updated 1299863 APPROVED
2005-07-29 Nudt5  nudix-type motif 5      Symbol and Name status set to provisional 70820 PROVISIONAL