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Gene: Mtg2 (mitochondrial ribosome-associated GTPase 2) Rattus norvegicus

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Symbol:

Mtg2

Name:

mitochondrial ribosome-associated GTPase 2

RGD ID:

1359243

Description:

Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in mitochondrial large ribosomal subunit assembly; regulation of mitochondrial translation; and regulation of respiratory system process. Predicted to be located in mitochondrial inner membrane and mitochondrial ribosome. Predicted to be active in mitochondrial matrix. Orthologous to human MTG2 (mitochondrial ribosome associated GTPase 2); INTERACTS WITH 4,4'-sulfonyldiphenol; acrylamide; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

GTP binding protein 5; GTP-binding protein 5; Gtpbp5; LOC296462; similar to GTP binding protein 5

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MTG2 (mitochondrial ribosome associated GTPase 2)	HGNC	Ensembl, HomoloGene, NCBI, Panther
Mus musculus (house mouse):	Mtg2 (mitochondrial ribosome associated GTPase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Mtg2 (mitochondrial ribosome associated GTPase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MTG2 (mitochondrial ribosome associated GTPase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MTG2 (mitochondrial ribosome associated GTPase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Mtg2 (mitochondrial ribosome associated GTPase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MTG2 (mitochondrial ribosome associated GTPase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MTG2 (mitochondrial ribosome associated GTPase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Mtg2 (mitochondrial ribosome associated GTPase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Mtg2 (mitochondrial ribosome associated GTPase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	MTG2 (mitochondrial ribosome associated GTPase 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Mtg2 (mitochondrial ribosome associated GTPase 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	mtg2 (mitochondrial ribosome-associated GTPase 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	MTG2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	MTG2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG13390	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	M01E5.2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	mtg2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	mtg2	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	187,543,166 - 187,558,973 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	187,543,178 - 187,558,989 (+)	Ensembl				GRCr8
mRatBN7.2	3	167,165,542 - 167,181,358 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	167,165,982 - 167,181,358 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	171,543,194 - 171,558,554 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	180,502,277 - 180,517,637 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	177,166,945 - 177,182,321 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	175,448,214 - 175,464,109 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	175,450,979 - 175,464,117 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	181,654,573 - 181,670,468 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	169,129,431 - 169,144,778 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	165,398,751 - 165,414,086 (-)	NCBI		Celera
RGSC_v3.1	3	169,035,466 - 169,050,813 (+)	NCBI
Cytogenetic Map	3	q43	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2-hydroxypropanoic acid (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

acrylamide (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

bisphenol A (EXP)

bisphenol F (EXP)

cadmium dichloride (ISO)

CGP 52608 (ISO)

corosolic acid (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (ISO)

folic acid (ISO)

FR900359 (ISO)

hydrogen peroxide (ISO)

indometacin (ISO)

ketamine (EXP)

pirinixic acid (ISO)

rac-lactic acid (ISO)

sodium arsenite (ISO)

theophylline (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

vinclozolin (EXP)

vincristine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mitochondrial large ribosomal subunit assembly (IEA,ISO)

regulation of mitochondrial translation (IEA,ISO)

regulation of respiratory system process (IEA,ISO)

ribosome biogenesis (IEA)

Cellular Component

mitochondrial inner membrane (IEA,ISO)

mitochondrial matrix (IEA,ISO)

mitochondrial ribosome (IEA,ISO)

mitochondrion (IBA,ISO)

Molecular Function

GTP binding (IBA,IEA)

GTPase activity (IBA,IEA,ISO)

magnesium ion binding (IEA)

nucleotide binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
4.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:18614015	PMID:23396448	PMID:34800366

Genomics

Comparative Map Data

Mtg2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	187,543,166 - 187,558,973 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	187,543,178 - 187,558,989 (+)	Ensembl				GRCr8
mRatBN7.2	3	167,165,542 - 167,181,358 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	167,165,982 - 167,181,358 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	171,543,194 - 171,558,554 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	180,502,277 - 180,517,637 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	177,166,945 - 177,182,321 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	175,448,214 - 175,464,109 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	175,450,979 - 175,464,117 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	181,654,573 - 181,670,468 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	169,129,431 - 169,144,778 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	165,398,751 - 165,414,086 (-)	NCBI		Celera
RGSC_v3.1	3	169,035,466 - 169,050,813 (+)	NCBI
Cytogenetic Map	3	q43	NCBI

MTG2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	62,183,028 - 62,203,568 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	62,183,025 - 62,203,568 (+)	Ensembl			hg38	GRCh38
GRCh37	20	60,758,084 - 60,778,624 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	60,191,476 - 60,211,218 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	20	60,201,647 - 60,211,168	NCBI
Celera	20	57,493,254 - 57,512,996 (+)	NCBI		Celera
Cytogenetic Map	20	q13.33	NCBI
HuRef	20	57,535,382 - 57,555,091 (+)	NCBI		HuRef
CHM1_1	20	60,659,036 - 60,678,778 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	20	63,973,904 - 63,994,443 (+)	NCBI		T2T-CHM13v2.0

Mtg2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	179,712,366 - 179,727,695 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	179,712,381 - 179,727,695 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	180,070,573 - 180,085,902 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	180,070,588 - 180,085,902 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	179,805,298 - 179,820,607 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	180,000,002 - 180,015,310 (+)	NCBI		MGSCv36	mm8
Celera	2	184,152,902 - 184,168,374 (+)	NCBI		Celera
Cytogenetic Map	2	H4	NCBI
cM Map	2	102.59	NCBI

Mtg2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955528	1,838,051 - 1,847,672 (-)	Ensembl
ChiLan1.0	NW_004955528	1,838,051 - 1,849,331 (-)	NCBI	ChiLan1.0	ChiLan1.0

MTG2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	67,965,605 - 67,986,123 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	67,958,726 - 67,979,245 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	58,549,895 - 58,570,406 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	59,870,003 - 59,890,140 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	59,870,003 - 59,890,140 (+)	Ensembl			panPan2	panpan1.1

MTG2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	46,216,653 - 46,229,400 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	46,223,141 - 46,229,344 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	45,452,688 - 45,466,024 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	47,072,155 - 47,085,491 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	47,072,627 - 47,085,468 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	46,173,592 - 46,186,926 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	46,296,790 - 46,310,130 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	47,051,087 - 47,064,424 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Mtg2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	194,387,870 - 194,396,740 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936514	9,841,507 - 9,850,525 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936514	9,841,507 - 9,850,383 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MTG2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	61,604,971 - 61,614,691 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	17	61,598,216 - 61,614,699 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

MTG2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	2,038,420 - 2,057,497 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	2,036,043 - 2,045,369 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666050	49,985,009 - 50,004,957 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mtg2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624741	28,053,475 - 28,072,462 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624741	28,054,647 - 28,070,886 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Mtg2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	157,155,994 - 157,169,953 (+)	NCBI		Rrattus_CSIRO_v1

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
9589106	Insul23	Insulin level QTL 23	13.86	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	3	152055202	189428310	Rat
10755461	Coatc16	Coat color QTL 16			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	3	142898802	187898802	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	145335553	189428310	Rat
1578653	Vnigr3	Vascular neointimal growth QTL 3	3.1		artery morphology trait (VT:0002191)	artery neointimal hyperplastic lesion area (CMO:0001414)	3	151075912	189428310	Rat
1298068	Bp167	Blood pressure QTL 167		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	161492708	189428310	Rat
1582256	Insul9	Insulin level QTL 9	4.4	0.0016	blood insulin amount (VT:0001560)	absolute change in serum insulin level (CMO:0002038)	3	155759447	189428310	Rat
1582248	Insul7	Insulin level QTL 7	3.9	0.0041	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
1578666	Vnigr1	Vascular neointimal growth QTL 1	4.6		artery morphology trait (VT:0002191)	artery lumen area (CMO:0001409)	3	151075912	189428310	Rat
1300161	Rf10	Renal function QTL 10	3.57		renal blood flow trait (VT:2000006)	absolute change in renal vascular resistance (CMO:0001900)	3	181611379	189428310	Rat
8552791	Vie2	Viral induced encephalitis QTL 2	4.1		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	3	166376089	189428310	Rat
1578656	Vnigr2	Vascular neointimal growth QTL 2	4.2		artery morphology trait (VT:0002191)	lesioned artery residual lumen area (CMO:0001417)	3	151075912	189428310	Rat
631541	Bp81	Blood pressure QTL 81	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	144575244	189428310	Rat
1582213	Insul6	Insulin level QTL 6	3.7	0.0009	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
1598854	Memor10	Memory QTL 10	2		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	3	166376089	189428310	Rat

Markers in Region

RH139957

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	167,164,983 - 167,165,166 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	175,447,742 - 175,447,924	NCBI	Rnor6.0
Rnor_5.0	3	181,670,758 - 181,670,940	UniSTS	Rnor5.0
RGSC_v3.4	3	169,128,430 - 169,128,612	UniSTS	RGSC3.4
Celera	3	165,414,905 - 165,415,087	UniSTS
RH 3.4 Map	3	1524.0	UniSTS
Cytogenetic Map	3	q43	UniSTS

D2Bwg0647e

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	167,178,043 - 167,178,389 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	175,460,797 - 175,461,142	NCBI	Rnor6.0
Rnor_5.0	3	181,657,539 - 181,657,885	NCBI	Rnor5.0
RGSC_v3.4	3	169,141,466 - 169,141,811	UniSTS	RGSC3.4
Cytogenetic Map	3	q43	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	92	59	6	356	192	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001013924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001430335	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001430336	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001430337	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001430338	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001430339	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001430340	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001430341	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001430342	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001430343	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001430345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001430346	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001430347	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001430348	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235818	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235820	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762485	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762487	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762491	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591618	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283424	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283425	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283426	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283427	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283428	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283429	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283430	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283431	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283432	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283434	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283435	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283436	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283437	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283438	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283439	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC130642	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC083707	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000089716 ⟹ ENSRNOP00000073234

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	187,546,040 - 187,558,969 (+)	Ensembl
mRatBN7.2 Ensembl	3	167,168,422 - 167,181,358 (+)	Ensembl
Rnor_6.0 Ensembl	3	175,450,979 - 175,464,117 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119776 ⟹ ENSRNOP00000088561

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	187,543,282 - 187,558,989 (+)	Ensembl
mRatBN7.2 Ensembl	3	167,165,982 - 167,181,356 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000172091 ⟹ ENSRNOP00000110209

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	187,543,178 - 187,558,989 (+)	Ensembl

RefSeq Acc Id:

NM_001013924 ⟹ NP_001013946

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,605 - 187,558,973 (+)	NCBI
mRatBN7.2	3	167,165,985 - 167,181,356 (+)	NCBI
Rnor_6.0	3	175,448,743 - 175,464,109 (+)	NCBI
Rnor_5.0	3	181,654,573 - 181,670,468 (-)	NCBI
RGSC_v3.4	3	169,129,431 - 169,144,778 (+)	RGD
Celera	3	165,398,751 - 165,414,086 (-)	RGD

Sequence:

show sequence

CTTTTGGAAAGCCTTTATGGATGCACTCCTCGGCGTGCCGCCTAACTGGGCATTTGACTTATCC
TGAGTCCCTGCCTCCGCGGCTTTATTCTTTTAAAGGTTTCCACATATCTGGCTCCCTGGCTGGC
CTTGAATTTCTTGTGTGGTAGAGGATGACCTTGATAATCCCATCTTCCCACCTCCAACCACTGA
GTGCAGCACAGTGAGGCCATGGTACCTACCAGACTTGTCTTGGCCAGGACTTGCACTGTGTTTG
ACAGTGTTTTGAAATGGGCTCCATCCACATGTGCTGTCCTCAAGCCCAGCCAGCTGCTTCCTCT
GCAAGCGTCATGCAGATTGCTCTCTGTGGGCATCGTAGACCACGCTAAGCACCGGGAGCCTTCT
GGGAAGAAGCTACTGTCAGAGAAGAAACTGAAAAGGCATTTCGTGGATCACCGGAGAGTGCTGT
TCCGTGGAGGAAGTGGGGGCTCTGGCATGAGCTGCTTCCACAGTGAACCCCGCAAGGAGTTCGG
AGGCCCTGATGGTGGGGATGGAGGAAATGGTGGACACATCATCCTGAGAGTTGACCAGCAAGTC
AAGTCCTTGTCCTCGGTCTTGTCCCAGTATCAGGGTTTCAGTGGAGAAGACGGTGGCAGTAAAA
ACTGCTTTGGACGTGGTGGTGCCACCCTCTACATCCAGGTCCCTGTGGGCACCTTGGTGAAAGA
AGGAGATGAGATTGTGGCTGACCTCTCCCACCTGGGAGACGAGTATGTGGCAGCTCTCGGAGGT
GCAGGAGGAAAAGGCAATCGTTTCTTTCTGGCCAATGACAACCGTGCCCCTGTAACTTGCACCC
CTGGACAACCGGGTCAGGAGCGGGTCCTCTATTTGGAACTCAAGACAATGGCTCACGCTGGGAT
GGTTGGCTTCCCGAATGCTGGGAAATCCTCTCTCCTTCGAGCCATTTCAAATGCAAAACCTGCT
GTAGCTTCCTACCCATTCACCACCTTGAACCCTCACGTGGGGATTGTTCACTATGAAGGCCACC
AACAGGTAGCAGTGGCAGACATCCCAGGAATCATCCGAGGCGCACACCAGAACAAGGGCCTGGG
CCTCAGCTTCCTCAGGCATATCGAGCGCTGTCGCTTCTTCCTGTATGTGGTAGATCTTTCCTTG
CCTGAGCCATGGACACAGGTTGACGATTTAAAATATGAACTAGAGAAGTATGAAGAAGGCCCGT
CAGAGAGGTCCCACGTGATCATTGCAAATAAGATTGATCTCCCGCAGGCCAGAGCCCACTTGCT
TCAGCTCCAGGACCGCCTCGGACAGGAGGTCATAGCCCTGTCAGCACTGACTGGGGAGAACCTG
GAGCAGCTGCTTCTACACCTGAAGGTGCTGCATGATGCCCACATAGAGGCCGAGCTGGAGCAGG
GTCGCCAGCCTCTCAGGTGGTAGTGAGCACAGGGCTGTGTGCCCCAGGGCCAGTGTTGGACAGG
GGTGGGCCAGCAGTCACAGGAAGCAAAAGCAACCTTTTTGTAAACTGCAGGCCGCTTTGAACTC
CAGAGACTAAGTACTTGCTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006235818 ⟹ XP_006235880

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,190 - 187,558,973 (+)	NCBI
mRatBN7.2	3	167,165,655 - 167,181,358 (+)	NCBI
Rnor_6.0	3	175,448,214 - 175,464,109 (+)	NCBI
Rnor_5.0	3	181,654,573 - 181,670,468 (-)	NCBI

Sequence:

show sequence

ACCTGGCTTTTCCCTGGTTTTGTGAGACAGGGTCACTGTGTGTCTCAGGATGGGCTGGAATTCA
CGGTGATTCTTCTGCTCAGGTTCCTCAGTGCCCTTATAGTAGACTTTTGGCTTCAGTGCTGTAG
GGACCCCGGGCTCAGAGGCGGTACCGCGCCTTCCGGCTTGCTGGTGCACTGCGCATGCGCGGCC
AGAAACCCGCCCCGGAAGCAGTCGAGCGAGCGGAGGTGGGAGCCTGCAGGGAGCCGGTTTCCAC
ATATCTGGCTCCCTGGCTGGCCTTGAATTTCTTGTGTGGTAGAGGATGACCTTGATAATCCCAT
CTTCCCACCTCCAACCACTGAGTGCAGCACAGGCCATGGTACCTACCAGACTTGTCTTGGCCAG
GACTTGCACTGTGTTTGACAGTGTTTTGAAATGGGCTCCATCCACATGTGCTGTCCTCAAGCCC
AGCCAGCTGCTTCCTCTGCAAGCGTCATGCAGATTGCTCTCTGTGGGCATCGTAGACCACGCTA
AGCACCGGGAGCCTTCTGGGAAGAAGCTACTGTCAGAGAAGAAACTGAAAAGGCATTTCGTGGA
TCACCGGAGAGTGCTGTTCCGTGGAGGAAGTGGGGGCTCTGGCATGAGCTGCTTCCACAGTGAA
CCCCGCAAGGAGTTCGGAGGCCCTGATGGTGGGGATGGAGGAAATGGTGGACACATCATCCTGA
GAGTTGACCAGCAAGTCAAGTCCTTGTCCTCGGTCTTGTCCCAGTATCAGGGTTTCAGTGGAGA
AGACGGTGGCAGTAAAAACTGCTTTGGACGTGGTGGTGCCACCCTCTACATCCAGGTCCCTGTG
GGCACCTTGGTGAAAGAAGGAGATGAGATTGTGGCTGACCTCTCCCACCTGGGAGACGAGTATG
TGGCAGCTCTCGGAGGTGCAGGAGGAAAAGGCAATCGTTTCTTTCTGGCCAATGACAACCGTGC
CCCTGTAACTTGCACCCCTGGACAACCGGGTCAGGAGCGGGTCCTCTATTTGGAACTCAAGACA
ATGGCTCACGCTGGGATGGTTGGCTTCCCGAATGCTGGGAAATCCTCTCTCCTTCGAGCCATTT
CAAATGCAAAACCTGCTGTAGCTTCCTACCCATTCACCACCTTGAACCCTCACGTGGGGATTGT
TCACTATGAAGGCCACCAACAGGTAGCAGTGGCAGACATCCCAGGAATCATCCGAGGCGCACAC
CAGAACAAGGGCCTGGGCCTCAGCTTCCTCAGGCATATCGAGCGCTGTCGCTTCTTCCTGTATG
TGGTAGATCTTTCCTTGCCTGAGCCATGGACACAGGTTGACGATTTAAAATATGAACTAGAGAA
GTATGAAGAAGGCCTGTCAGAGAGGTCCCACGTGATCATTGCAAATAAGATTGATCTCCCGCAG
GCCAGAGCCCACTTGCTTCAGCTCCAGGACCGCCTCGGACAGGAGGTCATAGCCCTGTCAGCAC
TGACTGGGGAGAACCTGGAGCAGCTGCTTCTACACCTGAAGGTGCTGCATGATGCCCACATAGA
GGCCGAGCTGGAGCAGGGTCGCCAGCCTCTCAGGTGGTAGTGAGCACAGGGCTGTGTGCCCCAG
GGCCAGTGTTGGACAGGGGTGGGCCAGCAGTCACAGGAAGCAAAAGCAACCTTTTTGTAAACTG
CAGGCCGCTTTGAACTCCAGAGACTAAGTACTTGCTAATA

hide sequence

RefSeq Acc Id:

XM_006235820 ⟹ XP_006235882

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,285 - 187,558,973 (+)	NCBI
mRatBN7.2	3	167,165,665 - 167,181,358 (+)	NCBI
Rnor_6.0	3	175,448,214 - 175,464,109 (+)	NCBI
Rnor_5.0	3	181,654,573 - 181,670,468 (-)	NCBI

Sequence:

show sequence

ACCTGGCTTTTCCCTGGTTTTGTGAGACAGGGTCACTGTGTGTCTCAGGATGGGCTGGAATTCA
CGGTGATTCTTCTGCTCAGGTTCCTCAGTGCCCTTATAGTAGACTTTTGGCTTCAGTGCTGTAG
GGACCCCGGGCTCAGAGGCGGTACCGCGCCTTCCGGCTTGCTGGTGCACTGCGCATGCGCGGCC
AGAAACCCGCCCCGGAAGCAGTCGAGCGAGCGGAGGTGGGAGCCTGCAGGGAGCCGACAGGTTT
CCACATATCTGGCTCCCTGGCTGGCCTTGAATTTCTTGTGTGGTAGAGGATGACCTTGATAATC
CCATCTTCCCACCTCCAACCACTGAGTGCAGCACAGTGAGGCCATGGTACCTACCAGACTTGTC
TTGGCCAGGACTTGCACTGTGTTTGACAGTGTTTTGAAATGGGCTCCATCCACATGTGCTGTCC
TCAAGCCCAGCCAGCTGCTTCCTCTGCAAGCGTCATGCAGATTGCTCTCTGTGGGCATCGTAGA
CCACGCTAAGCACCGGGAGCCTTCTGGGAAGAAGCTACTGTCAGAGAAGAAACTGAAAAGGCAT
TTCGTGGATCACCGGAGAGTGCTGTTCCGTGGAGGAAGTGGGGGCTCTGGCATGAGCTGCTTCC
ACAGTGAACCCCGCAAGGAGTTCGGAGGCCCTGATGGTGGGGATGGAGGAAATGGTGGACACAT
CATCCTGAGAGTTGACCAGCAAGTCAAGTCCTTGTCCTCGGTCTTGTCCCAGTATCAGGGTTTC
AGTGGAGAAGACGGTGGCAGTAAAAACTGCTTTGGACGTGGTGGTGCCACCCTCTACATCCAGG
TCCCTGTGGGCACCTTGGTGAAAGAAGGAGATGAGATTGTGGCTGACCTCTCCCACCTGGGAGA
CGAGTATGTGGCAGCTCTCGGAGGTGCAGGAGGAAAAGGCAATCGTTTCTTTCTGGCCAATGAC
AACCGTGCCCCTGTAACTTGCACCCCTGGACAACCGGGTCAGGAGCGGGTCCTCTATTTGGAAC
TCAAGACAATGGCTCACGCTGGGATGGTTGGCTTCCCGAATGCTGGGAAATCCTCTCTCCTTCG
AGCCATTTCAAATGCAAAACCTGCTGTAGCTTCCTACCCATTCACCACCTTGAACCCTCACGTG
GGGATTGTTCACTATGAAGGCCACCAACAGGTAGCAGTGGCAGACATCCCAGGAATCATCCGAG
GCGCACACCAGAACAAGGGCCTGGGCCTCAGCTTCCTCAGGCATATCGAGCGCTGTCGCTTCTT
CCTGTATGTGGTAGATCTTTCCTTGCCTGAGCCATGGACACAGGTTGACGATTTAAAATATGAA
CTAGAGAAGTATGAAGAAGGCCTGTCAGAGAGGTCCCACGTGATCATTGCAAATAAGATTGATC
TCCCGCAGGCCAGAGCCCACTTGCTTCAGCTCCAGGACCGCCTCGGACAGGAGGTCATAGCCCT
GTCAGCACTGACTGGGGAGAACCTGGAGCAGCTGCTTCTACACCTGAAGGTGCTGCATGATGCC
CACATAGAGGCCGAGCTGGAGCAGGGTCGCCAGCCTCTCAGGTGGTAGTGAGCACAGGGCTGTG
TGCCCCAGGGCCAGTGTTGGACAGGGGTGGGCCAGCAGTCACAGGAAGCAAAAGCAACCTTTTT
GTAAACTGCAGGCCGCTTTGAACTCCAGAGACTAAGTACTTGCTAATA

hide sequence

RefSeq Acc Id:

XM_017591618 ⟹ XP_017447107

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,310 - 187,558,973 (+)	NCBI
mRatBN7.2	3	167,165,733 - 167,181,358 (+)	NCBI
Rnor_6.0	3	175,448,214 - 175,464,109 (+)	NCBI

Sequence:

show sequence

ACCTGGCTTTTCCCTGGTTTTGTGAGACAGGGTCACTGTGTGTCTCAGGATGGGCTGGAATTCA
CGGTGATTCTTCTGCTCAGGTTCCTCAGTGCCCTTATAGTAGACTTTTGGCTTCAGTGCTGTAG
GGACCCCGGGCTCAGAGGCGGTACCGCGCCTTCCGGCTTGCTGGTGCACTGCGCATGCGCGGCC
AGAAACCCGCCCCGGAAGCAGTCGAGCGAGCGGAGGTGGGAGCCTGCAGGGAGCCGGTGGGTGC
GGGCGGTGTTTCCCGGTGTGCATTCTGCGGTGGCGGGTGGCTTGCGGGATGGCTGGGCGGGATT
TCTGTGTGTCGTGGCTCAGATGGGGACGGCCCGTCCGGCCTGAGCGCCAGAAAGTTGGTTTCTG
AGGGATTCGTTCTTGCTTGAGCTTGGTGGTGCCCGCCTGTAATCTCATCTGAGGCAGGTGGATT
TCTAGGAGTTCGAGGCCCGCCTAGGCCACATAGTGAGACCATGAACAGAAAACGATGACAGAAT
GTTACCCTTGCCCAGGTCTTTTGGAAAGCCTTTATGGATGCACTCCTCGGCGTGCCGCCTAACT
GGGCATTTGACTTATCCTGAGTCCCTGCCTCCGCGGCTTTATTCTTTTAAAGGTTTCCACATAT
CTGGCTCCCTGGCTGGCCTTGAATTTCTTGTGTGGTAGAGGATGACCTTGATAATCCCATCTTC
CCACCTCCAACCACTGAGTGCAGCACAGGCCATGGTACCTACCAGACTTGTCTTGGCCAGGACT
TGCACTGTGTTTGACAGTGTTTTGAAATGGGCTCCATCCACATGTGCTGTCCTCAAGCCCAGCC
AGCTGCTTCCTCTGCAAGCGTCATGCAGATTGCTCTCTGTGGGCATCGTAGACCACGCTAAGCA
CCGGGAGCCTTCTGGGAAGAAGCTACTGTCAGAGAAGAAACTGAAAAGGCATTTCGTGGATCAC
CGGAGAGTGCTGTTCCGTGGAGGAAGTGGGGGCTCTGGCATGAGCTGCTTCCACAGTGAACCCC
GCAAGGAGTTCGGAGGCCCTGATGGTGGGGATGGAGGAAATGGTGGACACATCATCCTGAGAGT
TGACCAGCAAGTCAAGTCCTTGTCCTCGGTCTTGTCCCAGTATCAGGGTTTCAGTGGAGAAGAC
GGTGGCAGTAAAAACTGCTTTGGACGTGGTGGTGCCACCCTCTACATCCAGGTTGGCTTCCCGA
ATGCTGGGAAATCCTCTCTCCTTCGAGCCATTTCAAATGCAAAACCTGCTGTAGCTTCCTACCC
ATTCACCACCTTGAACCCTCACGTGGGGATTGTTCACTATGAAGGCCACCAACAGGTAGCAGTG
GCAGACATCCCAGGAATCATCCGAGGCGCACACCAGAACAAGGGCCTGGGCCTCAGCTTCCTCA
GGCATATCGAGCGCTGTCGCTTCTTCCTGTATGTGGTAGATCTTTCCTTGCCTGAGCCATGGAC
ACAGGTTGACGATTTAAAATATGAACTAGAGAAGTATGAAGAAGGCCTGTCAGAGAGGTCCCAC
GTGATCATTGCAAATAAGATTGATCTCCCGCAGGCCAGAGCCCACTTGCTTCAGCTCCAGGACC
GCCTCGGACAGGAGGTCATAGCCCTGTCAGCACTGACTGGGGAGAACCTGGAGCAGCTGCTTCT
ACACCTGAAGGTGCTGCATGATGCCCACATAGAGGCCGAGCTGGAGCAGGGTCGCCAGCCTCTC
AGGTGGTAGTGAGCACAGGGCTGTGTGCCCCAGGGCCAGTGTTGGACAGGGGTGGGCCAGCAGT
CACAGGAAGCAAAAGCAACCTTTTTGTAAACTGCAGGCCGCTTTGAACTCCAGAGACTAAGTAC
TTGCTAATA

hide sequence

RefSeq Acc Id:

XM_063283424 ⟹ XP_063139494

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,172 - 187,558,973 (+)	NCBI

RefSeq Acc Id:

XM_063283425 ⟹ XP_063139495

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,281 - 187,558,973 (+)	NCBI

RefSeq Acc Id:

XM_063283426 ⟹ XP_063139496

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,267 - 187,558,973 (+)	NCBI

RefSeq Acc Id:

XM_063283427 ⟹ XP_063139497

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,307 - 187,558,973 (+)	NCBI

RefSeq Acc Id:

XM_063283428 ⟹ XP_063139498

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,367 - 187,558,973 (+)	NCBI

RefSeq Acc Id:

XM_063283429 ⟹ XP_063139499

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,166 - 187,558,973 (+)	NCBI

RefSeq Acc Id:

XM_063283430 ⟹ XP_063139500

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,282 - 187,558,973 (+)	NCBI

RefSeq Acc Id:

XM_063283431 ⟹ XP_063139501

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,367 - 187,558,973 (+)	NCBI

RefSeq Acc Id:

XM_063283432 ⟹ XP_063139502

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,285 - 187,558,973 (+)	NCBI

RefSeq Acc Id:

XM_063283433 ⟹ XP_063139503

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,367 - 187,558,973 (+)	NCBI

RefSeq Acc Id:

XM_063283434 ⟹ XP_063139504

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,275 - 187,558,973 (+)	NCBI

RefSeq Acc Id:

XM_063283435 ⟹ XP_063139505

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,201 - 187,558,973 (+)	NCBI

RefSeq Acc Id:

XM_063283436 ⟹ XP_063139506

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,190 - 187,558,973 (+)	NCBI

RefSeq Acc Id:

XM_063283437 ⟹ XP_063139507

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,172 - 187,558,973 (+)	NCBI

RefSeq Acc Id:

XM_063283438 ⟹ XP_063139508

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,282 - 187,558,973 (+)	NCBI

RefSeq Acc Id:

XM_063283439 ⟹ XP_063139509

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	187,543,310 - 187,558,973 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001013946	(Get FASTA)	NCBI Sequence Viewer
	NP_001417264	(Get FASTA)	NCBI Sequence Viewer
	NP_001417265	(Get FASTA)	NCBI Sequence Viewer
	NP_001417266	(Get FASTA)	NCBI Sequence Viewer
	NP_001417267	(Get FASTA)	NCBI Sequence Viewer
	NP_001417268	(Get FASTA)	NCBI Sequence Viewer
	NP_001417269	(Get FASTA)	NCBI Sequence Viewer
	NP_001417270	(Get FASTA)	NCBI Sequence Viewer
	NP_001417271	(Get FASTA)	NCBI Sequence Viewer
	NP_001417272	(Get FASTA)	NCBI Sequence Viewer
	NP_001417274	(Get FASTA)	NCBI Sequence Viewer
	NP_001417275	(Get FASTA)	NCBI Sequence Viewer
	NP_001417276	(Get FASTA)	NCBI Sequence Viewer
	NP_001417277	(Get FASTA)	NCBI Sequence Viewer
	XP_006235880	(Get FASTA)	NCBI Sequence Viewer
	XP_006235882	(Get FASTA)	NCBI Sequence Viewer
	XP_017447107	(Get FASTA)	NCBI Sequence Viewer
	XP_063139494	(Get FASTA)	NCBI Sequence Viewer
	XP_063139495	(Get FASTA)	NCBI Sequence Viewer
	XP_063139496	(Get FASTA)	NCBI Sequence Viewer
	XP_063139497	(Get FASTA)	NCBI Sequence Viewer
	XP_063139498	(Get FASTA)	NCBI Sequence Viewer
	XP_063139499	(Get FASTA)	NCBI Sequence Viewer
	XP_063139500	(Get FASTA)	NCBI Sequence Viewer
	XP_063139501	(Get FASTA)	NCBI Sequence Viewer
	XP_063139502	(Get FASTA)	NCBI Sequence Viewer
	XP_063139503	(Get FASTA)	NCBI Sequence Viewer
	XP_063139504	(Get FASTA)	NCBI Sequence Viewer
	XP_063139505	(Get FASTA)	NCBI Sequence Viewer
	XP_063139506	(Get FASTA)	NCBI Sequence Viewer
	XP_063139507	(Get FASTA)	NCBI Sequence Viewer
	XP_063139508	(Get FASTA)	NCBI Sequence Viewer
	XP_063139509	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH83707	(Get FASTA)	NCBI Sequence Viewer
	EDL88830	(Get FASTA)	NCBI Sequence Viewer
	EDL88831	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000073234
	ENSRNOP00000073234.1
	ENSRNOP00000088561
	ENSRNOP00000088561.1
	ENSRNOP00000110209
	ENSRNOP00000110209.1

RefSeq Acc Id:

NP_001013946 ⟸ NM_001013924

- UniProtKB:

A0A8I6AA18 (UniProtKB/TrEMBL), A6KMC2 (UniProtKB/TrEMBL), Q5XIH5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVPTRLVLARTCTVFDSVLKWAPSTCAVLKPSQLLPLQASCRLLSVGIVDHAKHREPSGKKLLS
EKKLKRHFVDHRRVLFRGGSGGSGMSCFHSEPRKEFGGPDGGDGGNGGHIILRVDQQVKSLSSV
LSQYQGFSGEDGGSKNCFGRGGATLYIQVPVGTLVKEGDEIVADLSHLGDEYVAALGGAGGKGN
RFFLANDNRAPVTCTPGQPGQERVLYLELKTMAHAGMVGFPNAGKSSLLRAISNAKPAVASYPF
TTLNPHVGIVHYEGHQQVAVADIPGIIRGAHQNKGLGLSFLRHIERCRFFLYVVDLSLPEPWTQ
VDDLKYELEKYEEGPSERSHVIIANKIDLPQARAHLLQLQDRLGQEVIALSALTGENLEQLLLH
LKVLHDAHIEAELEQGRQPLRW

hide sequence

RefSeq Acc Id:

XP_006235880 ⟸ XM_006235818

- Peptide Label:

isoform X1

- Sequence:

show sequence

MTLIIPSSHLQPLSAAQAMVPTRLVLARTCTVFDSVLKWAPSTCAVLKPSQLLPLQASCRLLSV
GIVDHAKHREPSGKKLLSEKKLKRHFVDHRRVLFRGGSGGSGMSCFHSEPRKEFGGPDGGDGGN
GGHIILRVDQQVKSLSSVLSQYQGFSGEDGGSKNCFGRGGATLYIQVPVGTLVKEGDEIVADLS
HLGDEYVAALGGAGGKGNRFFLANDNRAPVTCTPGQPGQERVLYLELKTMAHAGMVGFPNAGKS
SLLRAISNAKPAVASYPFTTLNPHVGIVHYEGHQQVAVADIPGIIRGAHQNKGLGLSFLRHIER
CRFFLYVVDLSLPEPWTQVDDLKYELEKYEEGLSERSHVIIANKIDLPQARAHLLQLQDRLGQE
VIALSALTGENLEQLLLHLKVLHDAHIEAELEQGRQPLRW

hide sequence

RefSeq Acc Id:

XP_006235882 ⟸ XM_006235820

- Peptide Label:

isoform X3

- Sequence:

show sequence

MVPTRLVLARTCTVFDSVLKWAPSTCAVLKPSQLLPLQASCRLLSVGIVDHAKHREPSGKKLLS
EKKLKRHFVDHRRVLFRGGSGGSGMSCFHSEPRKEFGGPDGGDGGNGGHIILRVDQQVKSLSSV
LSQYQGFSGEDGGSKNCFGRGGATLYIQVPVGTLVKEGDEIVADLSHLGDEYVAALGGAGGKGN
RFFLANDNRAPVTCTPGQPGQERVLYLELKTMAHAGMVGFPNAGKSSLLRAISNAKPAVASYPF
TTLNPHVGIVHYEGHQQVAVADIPGIIRGAHQNKGLGLSFLRHIERCRFFLYVVDLSLPEPWTQ
VDDLKYELEKYEEGLSERSHVIIANKIDLPQARAHLLQLQDRLGQEVIALSALTGENLEQLLLH
LKVLHDAHIEAELEQGRQPLRW

hide sequence

RefSeq Acc Id:	XP_017447107 ⟸ XM_017591618
- Peptide Label:	isoform X4
- UniProtKB:	Q5XIH5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTLIIPSSHLQPLSAAQAMVPTRLVLARTCTVFDSVLKWAPSTCAVLKPSQLLPLQASCRLLSV GIVDHAKHREPSGKKLLSEKKLKRHFVDHRRVLFRGGSGGSGMSCFHSEPRKEFGGPDGGDGGN GGHIILRVDQQVKSLSSVLSQYQGFSGEDGGSKNCFGRGGATLYIQVGFPNAGKSSLLRAISNA KPAVASYPFTTLNPHVGIVHYEGHQQVAVADIPGIIRGAHQNKGLGLSFLRHIERCRFFLYVVD LSLPEPWTQVDDLKYELEKYEEGLSERSHVIIANKIDLPQARAHLLQLQDRLGQEVIALSALTG ENLEQLLLHLKVLHDAHIEAELEQGRQPLRW hide sequence

Ensembl Acc Id:

ENSRNOP00000073234 ⟸ ENSRNOT00000089716

Ensembl Acc Id:

ENSRNOP00000088561 ⟸ ENSRNOT00000119776

RefSeq Acc Id:	XP_063139499 ⟸ XM_063283429
- Peptide Label:	isoform X1
- UniProtKB:	Q5XIH5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139494 ⟸ XM_063283424
- Peptide Label:	isoform X1
- UniProtKB:	Q5XIH5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139507 ⟸ XM_063283437
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063139506 ⟸ XM_063283436
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063139505 ⟸ XM_063283435
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063139496 ⟸ XM_063283426
- Peptide Label:	isoform X1
- UniProtKB:	Q5XIH5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139504 ⟸ XM_063283434
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063139495 ⟸ XM_063283425
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063139500 ⟸ XM_063283430
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063139508 ⟸ XM_063283438
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063139502 ⟸ XM_063283432
- Peptide Label:	isoform X2
- UniProtKB:	Q5XIH5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139497 ⟸ XM_063283427
- Peptide Label:	isoform X1
- UniProtKB:	Q5XIH5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139509 ⟸ XM_063283439
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063139501 ⟸ XM_063283431
- Peptide Label:	isoform X2
- UniProtKB:	Q5XIH5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139503 ⟸ XM_063283433
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AA18 (UniProtKB/TrEMBL), A6KMC2 (UniProtKB/TrEMBL), Q5XIH5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139498 ⟸ XM_063283428
- Peptide Label:	isoform X1
- UniProtKB:	Q5XIH5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000110209 ⟸ ENSRNOT00000172091

Protein Domains

Obg OBG-type G

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K4Z6-F1-model_v2	AlphaFold	A0A0G2K4Z6	1-496	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1359243	AgrOrtholog
BioCyc Gene	G2FUF-46371	BioCyc
Ensembl Genes	ENSRNOG00000059919	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000089716	ENTREZGENE
	ENSRNOT00000089716.3	UniProtKB/TrEMBL
	ENSRNOT00000119776	ENTREZGENE
	ENSRNOT00000119776.2	UniProtKB/TrEMBL
	ENSRNOT00000172091	ENTREZGENE
	ENSRNOT00000172091.1	UniProtKB/TrEMBL
Gene3D-CATH	2.70.210.12	UniProtKB/TrEMBL
	3.40.50.300	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7190542	IMAGE-MGC_LOAD
InterPro	G_OBG	UniProtKB/TrEMBL
	GTP-bd_Obg/CgtA	UniProtKB/TrEMBL
	GTP1_OBG_dom_sf	UniProtKB/TrEMBL
	GTP1_OBG_sub	UniProtKB/TrEMBL
	GTP_binding_domain	UniProtKB/TrEMBL
	OBG_GTPase	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	Small_GTP-bd_dom	UniProtKB/TrEMBL
KEGG Report	rno:296462	UniProtKB/TrEMBL
MGC_CLONE	MGC:94597	IMAGE-MGC_LOAD
NCBI Gene	296462	ENTREZGENE
PANTHER	MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 2	UniProtKB/TrEMBL
	PTHR11702	UniProtKB/TrEMBL
Pfam	GTP1_OBG	UniProtKB/TrEMBL
	MMR_HSR1	UniProtKB/TrEMBL
PhenoGen	Mtg2	PhenoGen
PIRSF	GTP_bd_Obg/CgtA	UniProtKB/TrEMBL
PRINTS	GTP1OBG	UniProtKB/TrEMBL
PROSITE	G_OBG	UniProtKB/TrEMBL
	OBG	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000059919	RatGTEx
Superfamily-SCOP	GTP1_OBG_sub	UniProtKB/TrEMBL
	SSF52540	UniProtKB/TrEMBL
UniProt	A0A0G2K4Z6_RAT	UniProtKB/TrEMBL
	A0A8I6AA18	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0M485_RAT	UniProtKB/TrEMBL
	A6KMC2	ENTREZGENE, UniProtKB/TrEMBL
	Q5XIH5	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2014-02-24	Mtg2	mitochondrial ribosome-associated GTPase 2	Gtpbp5	GTP binding protein 5	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-04	Gtpbp5	GTP binding protein 5	LOC296462	similar to GTP binding protein 5	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-07-29	LOC296462	similar to GTP binding protein 5			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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