Ankzf1 (ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Ankzf1 (ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1) Rattus norvegicus
Analyze
Symbol: Ankzf1
Name: ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1
RGD ID: 1359242
Description: Predicted to enable RNA endonuclease activity and catalytic activity, acting on a tRNA. Predicted to be involved in cellular response to hydrogen peroxide; proteolysis involved in protein catabolic process; and rescue of stalled ribosome. Predicted to act upstream of or within tRNA 3'-terminal CCA addition. Predicted to be located in cytoplasm. Orthologous to human ANKZF1 (ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ankyrin repeat and zinc finger domain containing 1; ankyrin repeat and zinc finger domain-containing protein 1; ankyrin repeat containing protein RGD1359242; LOC363255; RGD1359242; similar to hypothetical protein FLJ10415; tRNA endonuclease ANKZF1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8984,136,862 - 84,143,830 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl984,136,862 - 84,145,091 (+)EnsemblGRCr8
mRatBN7.2976,688,194 - 76,695,162 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl976,688,194 - 76,696,469 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx985,132,777 - 85,139,969 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0990,261,668 - 90,268,859 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0988,647,881 - 88,655,073 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0982,393,619 - 82,400,537 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl982,393,672 - 82,400,530 (+)Ensemblrn6Rnor6.0
Rnor_5.0982,162,796 - 82,169,815 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4974,474,576 - 74,481,441 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera974,258,691 - 74,265,556 (+)NCBICelera
RGSC_v3.1974,621,557 - 74,628,419 (+)NCBI
Cytogenetic Map9q33NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA,ISO,ISS)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:15489334   PMID:19946888   PMID:28302725  


Genomics

Comparative Map Data
Ankzf1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8984,136,862 - 84,143,830 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl984,136,862 - 84,145,091 (+)EnsemblGRCr8
mRatBN7.2976,688,194 - 76,695,162 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl976,688,194 - 76,696,469 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx985,132,777 - 85,139,969 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0990,261,668 - 90,268,859 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0988,647,881 - 88,655,073 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0982,393,619 - 82,400,537 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl982,393,672 - 82,400,530 (+)Ensemblrn6Rnor6.0
Rnor_5.0982,162,796 - 82,169,815 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4974,474,576 - 74,481,441 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera974,258,691 - 74,265,556 (+)NCBICelera
RGSC_v3.1974,621,557 - 74,628,419 (+)NCBI
Cytogenetic Map9q33NCBI
ANKZF1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382219,229,806 - 219,236,679 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2219,229,769 - 219,236,679 (+)Ensemblhg38GRCh38
GRCh372220,094,528 - 220,101,401 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362219,802,723 - 219,809,635 (+)NCBIBuild 36Build 36hg18NCBI36
Celera2213,864,186 - 213,871,098 (+)NCBICelera
Cytogenetic Map2q35NCBI
HuRef2211,947,637 - 211,954,300 (+)NCBIHuRef
CHM1_12220,100,315 - 220,107,227 (+)NCBICHM1_1
T2T-CHM13v2.02219,714,571 - 219,721,444 (+)NCBIT2T-CHM13v2.0
Ankzf1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39175,168,794 - 75,176,031 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl175,168,795 - 75,176,031 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38175,192,160 - 75,199,387 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl175,192,151 - 75,199,387 (+)Ensemblmm10GRCm38
MGSCv37175,188,709 - 75,195,962 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36175,075,470 - 75,082,535 (+)NCBIMGSCv36mm8
Celera175,683,022 - 75,690,274 (+)NCBICelera
Cytogenetic Map1C4NCBI
cM Map138.62NCBI
Ankzf1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545314,196,927 - 14,203,826 (-)Ensembl
ChiLan1.0NW_00495545314,196,728 - 14,204,344 (-)NCBIChiLan1.0ChiLan1.0
ANKZF1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213121,860,255 - 121,867,132 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B121,875,230 - 121,882,097 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B106,487,377 - 106,494,258 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B225,078,308 - 225,085,205 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B225,078,322 - 225,085,205 (+)EnsemblpanPan2panpan1.1
ANKZF1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13725,777,665 - 25,783,892 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3725,777,713 - 25,783,887 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3726,603,570 - 26,609,798 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03725,792,895 - 25,799,127 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3725,792,944 - 25,799,115 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13725,697,312 - 25,703,536 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03725,632,421 - 25,638,646 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03725,653,278 - 25,659,511 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Ankzf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303175,302,947 - 175,310,747 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365691,650,088 - 1,653,522 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365691,645,780 - 1,653,526 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANKZF1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15121,265,740 - 121,273,814 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.115121,265,693 - 121,273,813 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215134,300,646 - 134,308,773 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANKZF1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110105,133,136 - 105,140,439 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10105,133,216 - 105,140,141 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604094,255,969 - 94,263,166 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ankzf1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248235,780,484 - 5,787,007 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248235,780,287 - 5,787,543 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Ankzf1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v14148,550,811 - 148,557,782 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Ankzf1
51 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:57
Count of miRNA genes:44
Interacting mature miRNAs:54
Transcripts:ENSRNOT00000032419
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)9671488884474983Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)956047863101047863Rat
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)94002992585029925Rat
1582203Gluco19Glucose level QTL 193.30.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)963376862108376862Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)965657365108376720Rat
61352Bp34Blood pressure QTL 345arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)98216882386720295Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)94445825699506504Rat
1598834Memor11Memory QTL 112.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)94445825685262605Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)94172029586720295Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)964220169109220169Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)964220169109220169Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)944458256121768150Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)964220169109220169Rat
1581517Bp284Blood pressure QTL 284arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)93922018684220186Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)968875497121768150Rat
1354626Bvd1Brain ventricular dilatation QTL 13.730.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)983161999118999486Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)948718864108376862Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)94002992585029925Rat
1578757Pur6Proteinuria QTL 63.30.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)964220169109220169Rat
4889943Bss90Bone structure and strength QTL 904.1tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)95450650499506504Rat

Markers in Region
AA955828  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2976,693,367 - 76,693,536 (+)MAPPERmRatBN7.2
Rnor_6.0982,398,764 - 82,398,932NCBIRnor6.0
Rnor_5.0982,168,025 - 82,168,193UniSTSRnor5.0
RGSC_v3.4974,479,668 - 74,479,836UniSTSRGSC3.4
Celera974,263,783 - 74,263,951UniSTS
RH 3.4 Map9769.2UniSTS
Cytogenetic Map9q33UniSTS
AA955828  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2976,693,514 - 76,694,786 (+)MAPPERmRatBN7.2
Rnor_6.0982,398,911 - 82,400,182NCBIRnor6.0
Rnor_5.0982,168,172 - 82,169,443UniSTSRnor5.0
RGSC_v3.4974,479,815 - 74,481,086UniSTSRGSC3.4
Celera974,263,930 - 74,265,201UniSTS
RH 3.4 Map9769.2UniSTS
Cytogenetic Map9q33UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 163 91 90 59 92 59 6 356 192 11 142 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000032419   ⟹   ENSRNOP00000036500
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl984,136,862 - 84,143,830 (+)Ensembl
mRatBN7.2 Ensembl976,688,276 - 76,695,134 (+)Ensembl
Rnor_6.0 Ensembl982,393,672 - 82,400,530 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000101981   ⟹   ENSRNOP00000087720
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl984,136,862 - 84,145,091 (+)Ensembl
mRatBN7.2 Ensembl976,688,194 - 76,696,469 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000139430   ⟹   ENSRNOP00000111906
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl984,136,911 - 84,143,829 (+)Ensembl
RefSeq Acc Id: NM_001014219   ⟹   NP_001014241
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,136,862 - 84,143,830 (+)NCBI
mRatBN7.2976,688,194 - 76,695,162 (+)NCBI
Rnor_6.0982,393,672 - 82,400,537 (+)NCBI
Rnor_5.0982,162,796 - 82,169,815 (+)NCBI
RGSC_v3.4974,474,576 - 74,481,441 (+)RGD
Celera974,258,691 - 74,265,556 (+)RGD
Sequence:
RefSeq Acc Id: XM_006245248   ⟹   XP_006245310
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,137,165 - 84,143,809 (+)NCBI
mRatBN7.2976,688,223 - 76,695,141 (+)NCBI
Rnor_6.0982,393,619 - 82,400,537 (+)NCBI
Rnor_5.0982,162,796 - 82,169,815 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063267411   ⟹   XP_063123481
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,137,165 - 84,143,809 (+)NCBI
RefSeq Acc Id: XR_005488937
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8984,137,165 - 84,142,214 (+)NCBI
mRatBN7.2976,688,223 - 76,693,574 (+)NCBI
RefSeq Acc Id: NP_001014241   ⟸   NM_001014219
- UniProtKB: Q66H85 (UniProtKB/Swiss-Prot),   A0A8L2QKJ1 (UniProtKB/TrEMBL),   A6JVY8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006245310   ⟸   XM_006245248
- Peptide Label: isoform X1
- UniProtKB: Q66H85 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSRNOP00000036500   ⟸   ENSRNOT00000032419
Ensembl Acc Id: ENSRNOP00000087720   ⟸   ENSRNOT00000101981
RefSeq Acc Id: XP_063123481   ⟸   XM_063267411
- Peptide Label: isoform X2
- UniProtKB: Q66H85 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSRNOP00000111906   ⟸   ENSRNOT00000139430
Protein Domains
VLRF1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q66H85-F1-model_v2 AlphaFold Q66H85 1-722 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696771
Promoter ID:EPDNEW_R7295
Type:initiation region
Name:Ankzf1_1
Description:ankyrin repeat and zinc finger domain containing 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0982,393,645 - 82,393,705EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1359242 AgrOrtholog
BioCyc Gene G2FUF-27091 BioCyc
Ensembl Genes ENSRNOG00000019052 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000032419 ENTREZGENE
  ENSRNOT00000139430 ENTREZGENE
Gene3D-CATH 1.25.40.20 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7126276 IMAGE-MGC_LOAD
InterPro Ankyrin_rpt UniProtKB/Swiss-Prot
  Ankyrin_rpt-contain_sf UniProtKB/Swiss-Prot
  ANKZ1/VMS1 UniProtKB/Swiss-Prot
  VATC UniProtKB/Swiss-Prot
  VLRF1/Vms1 UniProtKB/Swiss-Prot
  Znf_C2H2_type UniProtKB/Swiss-Prot
KEGG Report rno:363255 UniProtKB/Swiss-Prot
MGC_CLONE MGC:94116 IMAGE-MGC_LOAD
NCBI Gene 363255 ENTREZGENE
PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 UniProtKB/Swiss-Prot
  ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 UniProtKB/Swiss-Prot
Pfam Ank UniProtKB/Swiss-Prot
  bVLRF1 UniProtKB/Swiss-Prot
  VATC UniProtKB/Swiss-Prot
PhenoGen Ankzf1 PhenoGen
PROSITE ANK_REP_REGION UniProtKB/Swiss-Prot
  ANK_REPEAT UniProtKB/Swiss-Prot
  VLRF1 UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000019052 RatGTEx
SMART ANK UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48403 UniProtKB/Swiss-Prot
UniProt A0A8I6A8B6_RAT UniProtKB/TrEMBL
  A0A8L2QKJ1 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0MA19_RAT UniProtKB/TrEMBL
  A6JVY8 ENTREZGENE, UniProtKB/TrEMBL
  ANKZ1_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-05-09 Ankzf1  ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1  Ankzf1  ankyrin repeat and zinc finger domain containing 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-07 Ankzf1  ankyrin repeat and zinc finger domain containing 1  RGD1359242  ankyrin repeat containing protein RGD1359242  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-11-17 RGD1359242  ankyrin repeat containing protein RGD1359242  LOC363255  similar to hypothetical protein FLJ10415  Symbol and Name updated 1299863 APPROVED
2005-07-29 LOC363255  similar to hypothetical protein FLJ10415      Symbol and Name status set to provisional 70820 PROVISIONAL