Pdia5 (protein disulfide isomerase family A, member 5) - Rat Genome Database

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Gene: Pdia5 (protein disulfide isomerase family A, member 5) Rattus norvegicus
Analyze
Symbol: Pdia5
Name: protein disulfide isomerase family A, member 5
RGD ID: 1359236
Description: Predicted to enable protein disulfide isomerase activity and protein-disulfide reductase activity. Predicted to be involved in protein folding. Predicted to be located in endoplasmic reticulum lumen. Predicted to be active in endoplasmic reticulum. Orthologous to human PDIA5 (protein disulfide isomerase family A member 5); INTERACTS WITH 17beta-estradiol; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC100911928; protein disulfide isomerase A5; protein disulfide isomerase-associated 5; protein disulfide-isomerase A5; protein disulfide-isomerase A5-like
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81178,777,436 - 78,892,370 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1178,777,419 - 78,864,329 (+)EnsemblGRCr8
mRatBN7.21165,272,152 - 65,359,087 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1165,272,155 - 65,359,084 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1174,095,261 - 74,182,045 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01166,757,523 - 66,844,318 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01165,788,798 - 65,875,595 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01168,493,035 - 68,578,999 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1168,493,035 - 68,578,995 (+)Ensemblrn6Rnor6.0
Rnor_5.01171,580,311 - 71,666,275 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41167,117,749 - 67,204,482 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1164,733,302 - 64,819,377 (+)NCBICelera
RGSC_v3.11167,175,337 - 67,262,069 (+)NCBI
Cytogenetic Map11q22NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View
COVID-19  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-amino-2,6-dinitrotoluene  (EXP)
6-propyl-2-thiouracil  (EXP)
acetamide  (EXP)
acrolein  (ISO)
acrylamide  (EXP,ISO)
adefovir pivoxil  (ISO)
amitrole  (EXP)
antimycin A  (ISO)
aristolochic acid A  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP)
bisphenol AF  (ISO)
bromobenzene  (EXP)
buspirone  (EXP)
cadmium dichloride  (ISO)
captan  (ISO)
carbon nanotube  (ISO)
chloroacetaldehyde  (ISO)
chlorpromazine  (EXP)
cidofovir anhydrous  (ISO)
cisplatin  (ISO)
clodronic acid  (ISO)
clofibrate  (ISO)
clofibric acid  (EXP)
cobalt dichloride  (ISO)
Cuprizon  (EXP)
cyclosporin A  (EXP,ISO)
cylindrospermopsin  (ISO)
diazinon  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
endosulfan  (EXP)
entinostat  (ISO)
fenofibrate  (EXP)
flutamide  (EXP)
folic acid  (ISO)
folpet  (ISO)
genistein  (ISO)
gentamycin  (EXP)
glyphosate  (ISO)
ibuprofen  (EXP)
ifosfamide  (ISO)
ivermectin  (ISO)
ketamine  (EXP)
lithium chloride  (ISO)
menadione  (ISO)
metformin  (EXP)
methoxychlor  (EXP)
N-methyl-4-phenylpyridinium  (EXP)
N-nitrosodiethylamine  (EXP)
nefazodone  (EXP)
nickel dichloride  (EXP)
okadaic acid  (ISO)
organophosphorus compound  (EXP)
ozone  (ISO)
panobinostat  (ISO)
paracetamol  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
propiconazole  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
sulfadimethoxine  (EXP)
tert-butyl hydroperoxide  (ISO)
testosterone  (ISO)
thapsigargin  (ISO)
thiram  (ISO)
titanium dioxide  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (EXP,ISO)
troglitazone  (EXP)
tunicamycin  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
protein folding  (IBA,IEA,ISO)

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:15489334   PMID:16677074  


Genomics

Comparative Map Data
Pdia5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81178,777,436 - 78,892,370 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1178,777,419 - 78,864,329 (+)EnsemblGRCr8
mRatBN7.21165,272,152 - 65,359,087 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1165,272,155 - 65,359,084 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1174,095,261 - 74,182,045 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01166,757,523 - 66,844,318 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01165,788,798 - 65,875,595 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01168,493,035 - 68,578,999 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1168,493,035 - 68,578,995 (+)Ensemblrn6Rnor6.0
Rnor_5.01171,580,311 - 71,666,275 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41167,117,749 - 67,204,482 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1164,733,302 - 64,819,377 (+)NCBICelera
RGSC_v3.11167,175,337 - 67,262,069 (+)NCBI
Cytogenetic Map11q22NCBI
PDIA5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383123,067,025 - 123,162,104 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3123,067,025 - 123,225,227 (+)Ensemblhg38GRCh38
GRCh373122,785,872 - 122,880,951 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363124,268,655 - 124,363,567 (+)NCBIBuild 36Build 36hg18NCBI36
Celera3121,192,646 - 121,287,739 (+)NCBICelera
Cytogenetic Map3q21.1NCBI
HuRef3120,158,749 - 120,254,205 (+)NCBIHuRef
CHM1_13122,749,529 - 122,844,663 (+)NCBICHM1_1
T2T-CHM13v2.03125,787,101 - 125,882,179 (+)NCBIT2T-CHM13v2.0
Pdia5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391635,217,678 - 35,311,289 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1635,217,682 - 35,311,243 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381635,397,308 - 35,490,919 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1635,397,312 - 35,490,873 (-)Ensemblmm10GRCm38
MGSCv371635,397,398 - 35,490,959 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361635,317,059 - 35,410,620 (-)NCBIMGSCv36mm8
Celera1635,866,403 - 35,959,222 (-)NCBICelera
Cytogenetic Map16B3NCBI
cM Map1625.37NCBI
Pdia5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542722,268,511 - 22,356,181 (+)Ensembl
ChiLan1.0NW_00495542722,268,730 - 22,356,123 (+)NCBIChiLan1.0ChiLan1.0
PDIA5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22121,012,763 - 121,107,773 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13121,017,569 - 121,112,548 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03120,155,981 - 120,250,961 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13127,059,751 - 127,154,451 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3127,059,751 - 127,154,451 (+)EnsemblpanPan2panpan1.1
PDIA5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13326,131,969 - 26,227,256 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3326,131,893 - 26,227,253 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3326,154,925 - 26,249,690 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03326,365,077 - 26,460,503 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3326,364,927 - 26,460,501 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13326,161,419 - 26,256,156 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03326,204,706 - 26,300,729 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03326,763,803 - 26,858,825 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Pdia5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602128,116,195 - 128,206,073 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367252,024,643 - 2,114,560 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049367252,024,646 - 2,114,530 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PDIA5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13137,296,883 - 137,398,628 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.113137,300,086 - 137,398,465 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213146,843,483 - 146,941,924 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PDIA5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12257,711,049 - 57,806,058 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2257,711,041 - 57,806,037 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666041108,540,265 - 108,633,350 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pdia5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046249121,408,645 - 1,523,498 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Pdia5
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1420,184,542 - 20,270,188 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Pdia5
626 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:109
Count of miRNA genes:83
Interacting mature miRNAs:90
Transcripts:ENSRNOT00000067984
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)112252474682951192Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)114644316891443168Rat
70208Niddm22Non-insulin dependent diabetes mellitus QTL 223.61blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)117330848796070872Rat
1581565Pur10Proteinuria QTL 100.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)115827236396350770Rat
4889859Pur28Proteinuria QTL 2819.50.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)115892833699753367Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
10755497Bp388Blood pressure QTL 3882.76arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)113294306789836615Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)113642841681428416Rat
10058954Gmadr7Adrenal mass QTL 72.490.0049adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)117385089499753367Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)113461876079618760Rat
1300135Rf19Renal function QTL 193.38blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)115441539196071021Rat
2298551Neuinf10Neuroinflammation QTL 103.7nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)115893182292356038Rat
2312566Glom20Glomerulus QTL 203.60.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)115775483796071021Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112019354996351019Rat
9589032Epfw10Epididymal fat weight QTL 109.290.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)113674945981749459Rat
724561Plsm4Polydactyly-luxate syndrome (PLS) morphotypes QTL 40.0003forelimb integrity trait (VT:0010562)front foot phalanges count (CMO:0001947)116796218499753367Rat
9590313Scort20Serum corticosterone level QTL 206.510.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)113674945981749459Rat
4889521Gluco62Glucose level QTL 622.820.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)116859932196497754Rat
7411658Foco27Food consumption QTL 2716.20.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)116985594399753367Rat
631506Bp104Blood pressure QTL 1042.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)117330831599753367Rat
8694424Bw162Body weight QTL 1623.80.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
1581572Uae35Urinary albumin excretion QTL 350.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)115827236396350770Rat
1300110Stl7Serum triglyceride level QTL 74.64blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)115107102196071021Rat

Markers in Region
RH139475  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21165,348,131 - 65,348,313 (+)MAPPERmRatBN7.2
Rnor_6.01168,568,046 - 68,568,227NCBIRnor6.0
Rnor_5.01171,655,322 - 71,655,503UniSTSRnor5.0
RGSC_v3.41167,193,529 - 67,193,710UniSTSRGSC3.4
Celera1164,808,424 - 64,808,605UniSTS
RH 3.4 Map11439.3UniSTS
Cytogenetic Map11q22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 162 91 90 59 92 59 6 356 192 11 141 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000067984   ⟹   ENSRNOP00000059945
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1178,777,419 - 78,864,329 (+)Ensembl
mRatBN7.2 Ensembl1165,272,155 - 65,359,084 (+)Ensembl
Rnor_6.0 Ensembl1168,493,035 - 68,578,995 (+)Ensembl
RefSeq Acc Id: NM_001014125   ⟹   NP_001014147
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81178,777,508 - 78,864,339 (+)NCBI
mRatBN7.21165,272,247 - 65,359,087 (+)NCBI
Rnor_6.01168,493,035 - 68,578,999 (+)NCBI
Rnor_5.01171,580,311 - 71,666,275 (+)NCBI
RGSC_v3.41167,117,749 - 67,204,482 (+)RGD
Celera1164,733,302 - 64,819,377 (+)RGD
Sequence:
RefSeq Acc Id: XM_039088495   ⟹   XP_038944423
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81178,777,671 - 78,864,326 (+)NCBI
mRatBN7.21165,272,361 - 65,359,081 (+)NCBI
RefSeq Acc Id: XM_039088496   ⟹   XP_038944424
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81178,777,436 - 78,852,524 (+)NCBI
mRatBN7.21165,272,152 - 65,346,263 (+)NCBI
RefSeq Acc Id: XM_063270642   ⟹   XP_063126712
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81178,777,436 - 78,892,370 (+)NCBI
RefSeq Acc Id: XM_063270643   ⟹   XP_063126713
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81178,778,174 - 78,864,326 (+)NCBI
RefSeq Acc Id: XR_005491040
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81178,777,436 - 78,851,517 (+)NCBI
mRatBN7.21165,272,168 - 65,346,240 (+)NCBI
RefSeq Acc Id: XR_005491041
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81178,777,436 - 78,851,517 (+)NCBI
mRatBN7.21165,272,168 - 65,346,261 (+)NCBI
RefSeq Acc Id: NP_001014147   ⟸   NM_001014125
- Peptide Label: precursor
- UniProtKB: Q5I0H9 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSRNOP00000059945   ⟸   ENSRNOT00000067984
RefSeq Acc Id: XP_038944424   ⟸   XM_039088496
- Peptide Label: isoform X3
- UniProtKB: A6IRG4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038944423   ⟸   XM_039088495
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063126712   ⟸   XM_063270642
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063126713   ⟸   XM_063270643
- Peptide Label: isoform X2
Protein Domains
Thioredoxin

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5I0H9-F1-model_v2 AlphaFold Q5I0H9 1-517 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698190
Promoter ID:EPDNEW_R8715
Type:initiation region
Name:Pdia5_1
Description:protein disulfide isomerase family A, member 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01168,492,983 - 68,493,043EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1359236 AgrOrtholog
BioCyc Gene G2FUF-21191 BioCyc
Ensembl Genes ENSRNOG00000032327 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000067984 ENTREZGENE
  ENSRNOT00000067984.2 UniProtKB/Swiss-Prot
Gene3D-CATH Glutaredoxin UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7323988 IMAGE-MGC_LOAD
InterPro PDI UniProtKB/Swiss-Prot
  PDI_a_PDIR UniProtKB/Swiss-Prot
  PDIA5_N_PDI_b UniProtKB/Swiss-Prot
  Thioredoxin-like_sf UniProtKB/Swiss-Prot
  Thioredoxin_CS UniProtKB/Swiss-Prot
  Thioredoxin_domain UniProtKB/Swiss-Prot
KEGG Report rno:360722 UniProtKB/Swiss-Prot
MGC_CLONE MGC:109516 IMAGE-MGC_LOAD
NCBI Gene 360722 ENTREZGENE
PANTHER PROTEIN DISULFIDE-ISOMERASE A5 UniProtKB/Swiss-Prot
  PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED UniProtKB/Swiss-Prot
Pfam Thioredoxin UniProtKB/Swiss-Prot
PhenoGen Pdia5 PhenoGen
PRINTS THIOREDOXIN UniProtKB/Swiss-Prot
PROSITE THIOREDOXIN_1 UniProtKB/Swiss-Prot
  THIOREDOXIN_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000032327 RatGTEx
Superfamily-SCOP SSF52833 UniProtKB/Swiss-Prot
UniProt A6IRG2_RAT UniProtKB/TrEMBL
  A6IRG3_RAT UniProtKB/TrEMBL
  A6IRG4 ENTREZGENE, UniProtKB/TrEMBL
  A6IRG5_RAT UniProtKB/TrEMBL
  A6IRG6_RAT UniProtKB/TrEMBL
  A6IRG7_RAT UniProtKB/TrEMBL
  PDIA5_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Pdia5  protein disulfide isomerase family A, member 5  LOC100911928  protein disulfide-isomerase A5-like  Data merged from RGD:6489714 737654 PROVISIONAL
2012-07-05 LOC100911928  protein disulfide-isomerase A5-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-10-10 Pdia5  protein disulfide isomerase family A, member 5  Pdia5  protein disulfide isomerase-associated 5  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-11-17 Pdia5  protein disulfide isomerase-associated 5      Symbol and Name status set to approved 1299863 APPROVED
2005-07-29 Pdia5  protein disulfide isomerase-associated 5      Symbol and Name status set to provisional 70820 PROVISIONAL