Vezt (vezatin, adherens junctions transmembrane protein) - Rat Genome Database

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Gene: Vezt (vezatin, adherens junctions transmembrane protein) Rattus norvegicus
Analyze
Symbol: Vezt
Name: vezatin, adherens junctions transmembrane protein
RGD ID: 1359117
Description: Predicted to enable myosin binding activity. Predicted to be involved in cell-cell adhesion and synapse maturation. Predicted to act upstream of or within chordate embryonic development. Predicted to be located in cytosol and nucleoplasm. Predicted to be part of stereocilia ankle link complex. Predicted to be active in glutamatergic synapse; plasma membrane; and postsynapse. Orthologous to human VEZT (vezatin, adherens junctions transmembrane protein); INTERACTS WITH 2,6-dinitrotoluene; acrylamide; carbonyl sulfide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: MGC94969; transmembrane protein vezatin; vezatin
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8730,399,208 - 30,484,429 (-)NCBIGRCr8
mRatBN7.2728,512,214 - 28,597,429 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl728,534,249 - 28,597,356 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx730,523,904 - 30,595,207 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0732,686,151 - 32,757,454 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0732,464,268 - 32,527,945 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0734,888,487 - 34,951,712 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl734,888,491 - 34,951,644 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0734,946,142 - 35,009,809 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4731,096,615 - 31,159,787 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1731,116,887 - 31,180,058 (-)NCBI
Celera725,627,720 - 25,690,723 (-)NCBICelera
Cytogenetic Map7q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Vezatin, a novel transmembrane protein, bridges myosin VIIA to the cadherin-catenins complex. Kussel-Andermann P, etal., EMBO J 2000 Nov 15;19(22):6020-9.
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:16199027   PMID:17567809  


Genomics

Comparative Map Data
Vezt
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8730,399,208 - 30,484,429 (-)NCBIGRCr8
mRatBN7.2728,512,214 - 28,597,429 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl728,534,249 - 28,597,356 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx730,523,904 - 30,595,207 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0732,686,151 - 32,757,454 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0732,464,268 - 32,527,945 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0734,888,487 - 34,951,712 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl734,888,491 - 34,951,644 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0734,946,142 - 35,009,809 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4731,096,615 - 31,159,787 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1731,116,887 - 31,180,058 (-)NCBI
Celera725,627,720 - 25,690,723 (-)NCBICelera
Cytogenetic Map7q13NCBI
VEZT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381295,217,807 - 95,302,799 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1295,217,746 - 95,302,799 (+)EnsemblGRCh38hg38GRCh38
GRCh371295,611,583 - 95,696,575 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361294,135,653 - 94,220,697 (+)NCBINCBI36Build 36hg18NCBI36
Celera1295,282,459 - 95,367,461 (+)NCBICelera
Cytogenetic Map12q22NCBI
HuRef1292,680,071 - 92,764,871 (+)NCBIHuRef
CHM1_11295,577,045 - 95,662,018 (+)NCBICHM1_1
T2T-CHM13v2.01295,198,602 - 95,283,569 (+)NCBIT2T-CHM13v2.0
Vezt
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391093,797,384 - 93,871,661 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1093,775,027 - 93,871,679 (-)EnsemblGRCm39 Ensembl
GRCm381093,961,522 - 94,035,799 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1093,939,165 - 94,035,817 (-)EnsemblGRCm38mm10GRCm38
MGSCv371093,430,845 - 93,498,493 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361093,397,899 - 93,465,547 (-)NCBIMGSCv36mm8
Celera1095,942,273 - 96,009,945 (-)NCBICelera
Cytogenetic Map10C2NCBI
Vezt
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540531,801,979 - 31,867,693 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540531,801,946 - 31,869,588 (+)NCBIChiLan1.0ChiLan1.0
VEZT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210103,290,683 - 103,373,557 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112103,287,038 - 103,371,478 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01292,809,279 - 92,893,527 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11296,203,543 - 96,287,046 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1296,203,543 - 96,287,046 (+)Ensemblpanpan1.1panPan2
VEZT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11535,162,734 - 35,232,689 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1535,162,833 - 35,228,040 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1535,549,421 - 35,617,480 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01535,827,134 - 35,900,837 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1535,827,144 - 35,897,273 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11535,100,370 - 35,168,435 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01535,195,245 - 35,263,216 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01535,458,034 - 35,525,824 (+)NCBIUU_Cfam_GSD_1.0
Vezt
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494524,719,785 - 24,796,647 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650711,438,901 - 11,515,151 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650711,438,790 - 11,518,021 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
VEZT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl588,031,979 - 88,104,742 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1588,000,027 - 88,104,768 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2592,199,802 - 92,302,330 (-)NCBISscrofa10.2Sscrofa10.2susScr3
VEZT
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11190,622,655 - 90,708,046 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037154,462,342 - 154,545,044 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Vezt
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475011,808,192 - 11,868,985 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475011,808,192 - 11,869,019 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Vezt
554 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:334
Count of miRNA genes:199
Interacting mature miRNAs:238
Transcripts:ENSRNOT00000030015
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354644Spl4Serum phospholipid level QTL 44.9blood phospholipid amount (VT:0006084)blood phospholipid level (CMO:0001169)71965431749753746Rat
7411569Bw137Body weight QTL 1370.001body mass (VT:0001259)body weight gain (CMO:0000420)72192119566921195Rat
9590102Sffal5Serum free fatty acids level QTL 58.620.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)7532901950329019Rat
1578652Bmd15Bone mineral density QTL 155.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)7986646760460686Rat
1641885Alcrsp9Alcohol response QTL 9alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)72409960669099606Rat
631503Bp102Blood pressure QTL 1021.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7144822433Rat
1549840Bss5Bone structure and strength QTL 59.8femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)72475184169751841Rat
10755438Coatc9Coat color QTL 90coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7352928048529280Rat
2298547Neuinf5Neuroinflammation QTL 53.7nervous system integrity trait (VT:0010566)spinal cord Cd74 protein level (CMO:0002131)7946224658265113Rat
10059592Kidm45Kidney mass QTL 453.950.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)7757398552573985Rat
2317047Wbc4White blood cell count QTL 40.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)7135342956Rat
10755440Coatc10Coat color QTL 100coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7749649952496499Rat
1354637Scl30Serum cholesterol level QTL 303.7blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)71965431749753746Rat
724560Plsm3Polydactyly-luxate syndrome (PLS) morphotypes QTL 30.0003tibia length (VT:0004357)tibia length (CMO:0000450)7134000259Rat
1354639Spl5Serum phospholipid level QTL 53.9blood LDL phospholipid amount (VT:0010505)blood low density lipoprotein phospholipid level (CMO:0001568)71965431752888450Rat
7411566Bw136Body weight QTL 13610.40.001body mass (VT:0001259)body weight gain (CMO:0000420)7131962314Rat
10755451Coatc11Coat color QTL 110coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)71794435762944357Rat
2317059Aia15Adjuvant induced arthritis QTL 152.46joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)71700459862004598Rat
61410Bw19Body weight QTL 196.20.001body mass (VT:0001259)body weight (CMO:0000012)7144782185Rat
1643004Pain2Pain QTL 21mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)7946224698011544Rat
2290372Gluco33Glucose level QTL 332.71blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)72055570529891047Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)7924703115097879Rat
9590142Scort5Serum corticosterone level QTL 524.40.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)7131962314Rat
1582260Bw72Body weight QTL 723.20.0043body mass (VT:0001259)body weight (CMO:0000012)71579556538073970Rat
1582261Bw69Body weight QTL 693.20.0048body mass (VT:0001259)body weight (CMO:0000012)71579556538073970Rat
1582262Bw75Body weight QTL 7530.0038body mass (VT:0001259)body weight (CMO:0000012)71579556538073970Rat
70190Mcs6Mammary carcinoma susceptibility QTL 62.29mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)72673740163902784Rat
1300132Bp182Blood pressure QTL 1823.49arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)71965431784928080Rat
61369Mcs2Mammary carcinoma susceptibility QTL 23.38mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)71903280735526300Rat
738033Anxrr6Anxiety related response QTL 64.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)71557388960573889Rat

Markers in Region
RH134549  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2728,534,402 - 28,534,616 (+)MAPPERmRatBN7.2
Rnor_6.0734,888,645 - 34,888,858NCBIRnor6.0
Rnor_5.0734,946,300 - 34,946,513UniSTSRnor5.0
RGSC_v3.4731,096,773 - 31,096,986UniSTSRGSC3.4
Celera725,627,878 - 25,628,091UniSTS
RH 3.4 Map7194.2UniSTS
Cytogenetic Map7q13UniSTS
BF399551  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2728,535,408 - 28,535,610 (+)MAPPERmRatBN7.2
Rnor_6.0734,889,651 - 34,889,852NCBIRnor6.0
Rnor_5.0734,947,306 - 34,947,507UniSTSRnor5.0
RGSC_v3.4731,097,779 - 31,097,980UniSTSRGSC3.4
Celera725,628,884 - 25,629,085UniSTS
RH 3.4 Map7195.4UniSTS
Cytogenetic Map7q13UniSTS
BE118041  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2728,548,210 - 28,548,392 (+)MAPPERmRatBN7.2
Rnor_6.0734,902,451 - 34,902,632NCBIRnor6.0
Rnor_5.0734,960,106 - 34,960,287UniSTSRnor5.0
RGSC_v3.4731,110,579 - 31,110,760UniSTSRGSC3.4
Celera725,641,680 - 25,641,861UniSTS
RH 3.4 Map7194.8UniSTS
Cytogenetic Map7q13UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001006984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039078694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039078696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039078697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005486572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC105868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC083840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000030015   ⟹   ENSRNOP00000038458
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl728,534,249 - 28,597,356 (-)Ensembl
Rnor_6.0 Ensembl734,888,491 - 34,951,644 (-)Ensembl
RefSeq Acc Id: NM_001006984   ⟹   NP_001006985
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8730,421,239 - 30,484,366 (-)NCBI
mRatBN7.2728,534,245 - 28,597,375 (-)NCBI
Rnor_6.0734,888,487 - 34,951,644 (-)NCBI
Rnor_5.0734,946,142 - 35,009,809 (-)NCBI
RGSC_v3.4731,096,615 - 31,159,787 (-)RGD
Celera725,627,720 - 25,690,723 (-)RGD
Sequence:
RefSeq Acc Id: XM_017594734   ⟹   XP_017450223
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8730,421,696 - 30,484,429 (-)NCBI
mRatBN7.2728,534,245 - 28,597,429 (-)NCBI
Rnor_6.0734,888,487 - 34,951,712 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039078694   ⟹   XP_038934622
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8730,421,696 - 30,484,429 (-)NCBI
mRatBN7.2728,534,245 - 28,597,429 (-)NCBI
RefSeq Acc Id: XM_039078696   ⟹   XP_038934624
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8730,421,696 - 30,484,429 (-)NCBI
mRatBN7.2728,535,320 - 28,597,429 (-)NCBI
RefSeq Acc Id: XM_039078697   ⟹   XP_038934625
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8730,421,696 - 30,455,402 (-)NCBI
mRatBN7.2728,534,245 - 28,571,376 (-)NCBI
RefSeq Acc Id: XM_063263202   ⟹   XP_063119272
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8730,421,696 - 30,455,402 (-)NCBI
RefSeq Acc Id: XM_063263203   ⟹   XP_063119273
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8730,421,696 - 30,458,314 (-)NCBI
RefSeq Acc Id: XR_005486572
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8730,399,208 - 30,484,429 (-)NCBI
mRatBN7.2728,512,214 - 28,597,429 (-)NCBI
RefSeq Acc Id: NP_001006985   ⟸   NM_001006984
- UniProtKB: Q5XI52 (UniProtKB/Swiss-Prot),   A6IFZ9 (UniProtKB/TrEMBL),   A6IG00 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017450223   ⟸   XM_017594734
- Peptide Label: isoform X5
- UniProtKB: A0A8L2QL87 (UniProtKB/TrEMBL),   A6IFZ8 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000038458   ⟸   ENSRNOT00000030015
RefSeq Acc Id: XP_038934622   ⟸   XM_039078694
- Peptide Label: isoform X1
- UniProtKB: A6IG00 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038934625   ⟸   XM_039078697
- Peptide Label: isoform X4
- UniProtKB: A6IG01 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038934624   ⟸   XM_039078696
- Peptide Label: isoform X3
- UniProtKB: A6IFZ8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119273   ⟸   XM_063263203
- Peptide Label: isoform X6
- UniProtKB: A6IG00 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119272   ⟸   XM_063263202
- Peptide Label: isoform X2
- UniProtKB: A6IG01 (UniProtKB/TrEMBL)
Protein Domains
Myosin-binding

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5XI52-F1-model_v2 AlphaFold Q5XI52 1-782 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695151
Promoter ID:EPDNEW_R5676
Type:initiation region
Name:Vezt_1
Description:vezatin, adherens junctions transmembrane protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0734,951,629 - 34,951,689EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1359117 AgrOrtholog
BioCyc Gene G2FUF-34380 BioCyc
Ensembl Genes ENSRNOG00000006514 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000030015.5 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7114280 IMAGE-MGC_LOAD
InterPro Myosin-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Vezatin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:299738 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:94969 IMAGE-MGC_LOAD
NCBI Gene 299738 ENTREZGENE
PANTHER PTHR15989 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VEZATIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Vezatin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Vezt PhenoGen
RatGTEx ENSRNOG00000006514 RatGTEx
UniProt A0A8L2QL87 ENTREZGENE, UniProtKB/TrEMBL
  A6IFZ8 ENTREZGENE, UniProtKB/TrEMBL
  A6IFZ9 ENTREZGENE, UniProtKB/TrEMBL
  A6IG00 ENTREZGENE, UniProtKB/TrEMBL
  A6IG01 ENTREZGENE, UniProtKB/TrEMBL
  A6IG02_RAT UniProtKB/TrEMBL
  A6IG04_RAT UniProtKB/TrEMBL
  A6IG05_RAT UniProtKB/TrEMBL
  Q5XI52 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-03-30 Vezt  vezatin, adherens junctions transmembrane protein  MGC94969  transmembrane protein vezatin  Symbol and Name updated 1299863 APPROVED
2005-07-29 MGC94969  transmembrane protein vezatin      Symbol and Name status set to provisional 70820 PROVISIONAL