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Gene: Ddi2 (DDI proteasomal shuttling factor 2) Rattus norvegicus

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Symbol:

Ddi2

Name:

DDI proteasomal shuttling factor 2 (Ensembl:DNA damage inducible 1 homolog 2)

RGD ID:

1311815

Description:

Predicted to enable aspartic-type endopeptidase activity; identical protein binding activity; and ubiquitin binding activity. Predicted to be involved in several processes, including cellular response to hydroxyurea; proteolysis; and regulation of DNA stability. Orthologous to human DDI2 (DNA damage inducible 1 homolog 2) and RSC1A1 (regulator of solute carriers 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; metformin.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

DNA damage inducible 1 homolog 2; DNA-damage inducible protein 2; LOC313668; protein DDI1 homolog 2; RGD1311815; similar to RIKEN cDNA 1700027M01

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DDI2 (DDI proteasomal shuttling factor 2)	HGNC	Ensembl, HomoloGene, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Ddi2 (DNA-damage inducible protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ddi2 (DDI proteasomal shuttling factor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DDI2 (DDI proteasomal shuttling factor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DDI2 (DNA damage inducible 1 homolog 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DDI2 (DDI proteasomal shuttling factor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Ddi2 (DDI proteasomal shuttling factor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	RSC1A1 (regulator of solute carriers 1)	HGNC	Ensembl, OrthoDB
Alliance orthologs ³
Mus musculus (house mouse):	Ddi2 (DNA-damage inducible protein 2)	Alliance	DIOPT (OrthoFinder\|PANTHER\|PhylomeDB)
Homo sapiens (human):	RSC1A1 (regulator of solute carriers 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|PhylomeDB)
Homo sapiens (human):	RSC1A1 (regulator of solute carriers 1)	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|PhylomeDB)
Homo sapiens (human):	DDI2 (DDI proteasomal shuttling factor 2)	Alliance	DIOPT (HGNC\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	DDI2 (DDI proteasomal shuttling factor 2)	Alliance	DIOPT (HGNC\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rsc1a1 (regulatory solute carrier protein, family 1, member 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rsc1a1 (regulatory solute carrier protein, family 1, member 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ddi2 (DNA-damage inducible protein 2)	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ddi2 (DNA-damage inducible protein 2)	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	DDI1	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	DDI1	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ddi-1	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ddi-1	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	rngo	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	rngo	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ddi2	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ddi2	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	159,272,625 - 159,318,365 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	159,272,625 - 159,318,310 (-)	Ensembl				GRCr8
mRatBN7.2	5	153,989,591 - 154,035,342 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	153,995,589 - 154,035,283 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	156,674,824 - 156,720,295 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	158,448,107 - 158,493,578 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	158,437,257 - 158,482,731 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	160,230,958 - 160,282,836 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	160,230,955 - 160,282,810 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	163,945,355 - 163,995,230 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	160,582,315 - 160,621,531 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	152,349,276 - 152,388,832 (-)	NCBI		Celera
RGSC_v3.1	5	160,587,176 - 160,631,541 (-)	NCBI
Cytogenetic Map	5	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,6-dimethoxyphenol (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (ISO)

bisphenol F (ISO)

butanal (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

carbon nanotube (ISO)

chlorpyrifos (ISO)

diarsenic trioxide (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

dimethyl sulfoxide (ISO)

disodium selenite (ISO)

doxorubicin (ISO)

folic acid (ISO)

furfural (ISO)

GSK-J4 (ISO)

hydrogen cyanide (ISO)

hydrogen peroxide (ISO)

ivermectin (ISO)

leflunomide (ISO)

metformin (EXP)

methapyrilene (ISO)

okadaic acid (ISO)

paracetamol (EXP,ISO)

perfluorohexanesulfonic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

potassium cyanide (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sodium chloride (ISO)

theophylline (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

troglitazone (ISO)

tungsten (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to hydroxyurea (IEA,ISO)

proteasomal protein catabolic process (ISO)

protein processing (ISO)

protein transport (IEA)

proteolysis (IEA)

proteolysis involved in protein catabolic process (IEA)

regulation of DNA stability (IEA,ISO)

regulation of protein stability (IEA,ISO)

Cellular Component

cytosol (ISO)

nucleoplasm (ISO)

Molecular Function

aspartic-type endopeptidase activity (IEA,ISO)

hydrolase activity (IEA)

identical protein binding (ISO)

peptidase activity (IEA)

protein binding (ISO)

ubiquitin binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	GOA pipeline	RGD automated data pipeline
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:27461074	PMID:27528193	PMID:27676298	PMID:29290612

Genomics

Comparative Map Data

Ddi2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	159,272,625 - 159,318,365 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	159,272,625 - 159,318,310 (-)	Ensembl				GRCr8
mRatBN7.2	5	153,989,591 - 154,035,342 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	153,995,589 - 154,035,283 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	156,674,824 - 156,720,295 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	158,448,107 - 158,493,578 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	158,437,257 - 158,482,731 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	160,230,958 - 160,282,836 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	160,230,955 - 160,282,810 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	163,945,355 - 163,995,230 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	160,582,315 - 160,621,531 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	152,349,276 - 152,388,832 (-)	NCBI		Celera
RGSC_v3.1	5	160,587,176 - 160,631,541 (-)	NCBI
Cytogenetic Map	5	q36	NCBI

DDI2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	15,617,458 - 15,669,044 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	15,617,458 - 15,669,044 (+)	Ensembl			hg38	GRCh38
GRCh37	1	15,943,953 - 15,995,539 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	15,816,657 - 15,859,335 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	1	14,426,817 - 14,470,431 (+)	NCBI		Celera
Cytogenetic Map	1	p36.21	NCBI
HuRef	1	14,463,422 - 14,506,965 (+)	NCBI		HuRef
CHM1_1	1	15,742,627 - 15,786,290 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	15,062,171 - 15,113,775 (+)	NCBI		T2T-CHM13v2.0

Ddi2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	141,410,874 - 141,450,730 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	141,404,860 - 141,450,743 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	141,683,563 - 141,723,419 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	141,677,549 - 141,723,419 (-)	Ensembl			mm10	GRCm38
MGSCv37	4	141,239,478 - 141,279,334 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	140,955,639 - 140,995,495 (-)	NCBI		MGSCv36	mm8
Celera	4	143,507,133 - 143,546,916 (-)	NCBI		Celera
Cytogenetic Map	4	D3	NCBI
cM Map	4	74.69	NCBI

Ddi2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955527	2,493,469 - 2,534,768 (-)	Ensembl
ChiLan1.0	NW_004955527	2,498,211 - 2,534,768 (-)	NCBI	ChiLan1.0	ChiLan1.0

DDI2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	211,247,481 - 211,301,116 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	210,496,015 - 210,549,655 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	14,757,327 - 14,810,959 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	15,749,497 - 15,795,631 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	15,749,497 - 15,790,263 (+)	Ensembl			panPan2	panpan1.1
PanPan1.1 Ensembl	1	15,793,469 - 15,795,325 (+)	Ensembl			panPan2	panpan1.1

DDI2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	81,915,613 - 81,957,803 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	78,459,544 - 78,495,093 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	82,570,756 - 82,606,321 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	82,570,758 - 82,606,257 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	79,323,680 - 79,359,224 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	80,342,173 - 80,377,711 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	81,407,500 - 81,443,055 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

DDI2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	116,640,166 - 116,680,403 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666054	20,167,661 - 20,222,435 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ddi2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	16,428,745 - 16,462,251 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ddi2
168 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	838
Count of miRNA genes:	320
Interacting mature miRNAs:	414
Transcripts:	ENSRNOT00000016352
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10053720	Scort26	Serum corticosterone level QTL 26	2.06	0.0147	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	130249266	172190305	Rat
8552960	Pigfal15	Plasma insulin-like growth factor 1 level QTL 15			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	116702075	161702075	Rat
1354583	Despr3	Despair related QTL3	4.98	0.0002	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	5	132930505	172190305	Rat
61444	Strs2	Sensitivity to stroke QTL 2	4.7		cerebrum integrity trait (VT:0010549)	post-insult time to onset of cerebrovascular lesion (CMO:0002343)	5	141212838	172190305	Rat
1300119	Bp180	Blood pressure QTL 180	3.82		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	5	149642129	171146538	Rat
61452	Ciaa5	CIA Autoantibody QTL 5	3.5		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	5	99905133	172190305	Rat
8552908	Pigfal4	Plasma insulin-like growth factor 1 level QTL 4	6.6		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	133789363	172190305	Rat
1331803	Rf32	Renal function QTL 32	2.798		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	134369199	172190305	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	65089051	166764498	Rat
7794791	Mcs33	Mammary carcinoma susceptibility QTL 33	1.93		mammary gland integrity trait (VT:0010552)	mammary tumor incidence/prevalence measurement (CMO:0000946)	5	136631198	172190305	Rat
1354631	Swd2	Spike wave discharge measurement QTL 2	3.64	0.0002	brain electrophysiology trait (VT:0010557)	brain total spike-and-wave discharge duration (CMO:0001740)	5	156396728	172190305	Rat
1598861	Cm64	Cardiac mass QTL 64	2.9		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	133081618	172190305	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	51657967	166600247	Rat
631263	Cm24	Cardiac mass QTL 24	3.5		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	5	149805999	162987697	Rat
631505	Bp103	Blood pressure QTL 103	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	138002522	170842766	Rat
1581505	Rf54	Renal function QTL 54			kidney physiology trait (VT:0002136)	kidney 20-HETE level (CMO:0001854)	5	133270647	172190305	Rat
2317753	Glom24	Glomerulus QTL 24	3.1		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	5	141764300	172190305	Rat
8694169	Bw148	Body weight QTL 148	5	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	133789363	172190305	Rat
1331721	Bp210	Blood pressure QTL 210	3.413		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	5	148093485	172129029	Rat
1581510	Cm54	Cardiac mass QTL 54	3.4	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	5	125969677	172190305	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55124766	172190305	Rat
631272	Lanf1	Left ventricular atrial natriuretic factor QTL 1	12		heart left ventricle natriuretic peptide A amount (VT:0010596)	heart left ventricle natriuretic peptide A level (CMO:0002165)	5	156396728	167181764	Rat
724525	Bp147	Blood pressure QTL 147	4.3	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	131708216	172190305	Rat
2313096	Bmd78	Bone mineral density QTL 78	3.1	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	5	149661912	166600247	Rat
8694441	Bw169	Body weight QTL 169	17.61	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	5	116702075	161702075	Rat
8694389	Bw160	Body weight QTL 160	6.17	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	5	116702075	161702075	Rat
8694198	Abfw3	Abdominal fat weight QTL 3	16.13	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	5	116702075	161702075	Rat
1298090	Bp155	Blood pressure QTL 155	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	5	156289283	171137955	Rat
1598819	Bp292	Blood pressure QTL 292	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	133081618	172190305	Rat

Markers in Region

AU040698

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	153,995,867 - 153,995,964 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	160,237,230 - 160,237,326	NCBI	Rnor6.0
Rnor_5.0	5	163,951,630 - 163,951,726	UniSTS	Rnor5.0
RGSC_v3.4	5	160,582,594 - 160,582,690	UniSTS	RGSC3.4
Celera	5	152,349,555 - 152,349,651	UniSTS
Cytogenetic Map	5	q36	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	92	59	6	356	192	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001395586	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006239305	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006239306	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006239308	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC097361	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000016352 ⟹ ENSRNOP00000016352

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	159,278,376 - 159,283,585 (-)	Ensembl
mRatBN7.2 Ensembl	5	153,995,590 - 154,035,283 (-)	Ensembl
Rnor_6.0 Ensembl	5	160,236,952 - 160,282,810 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000076160 ⟹ ENSRNOP00000068216

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	5	160,230,955 - 160,282,810 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109253 ⟹ ENSRNOP00000087348

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	159,277,949 - 159,310,051 (-)	Ensembl
mRatBN7.2 Ensembl	5	153,995,589 - 154,027,085 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119479 ⟹ ENSRNOP00000077256

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	159,277,949 - 159,318,310 (-)	Ensembl
mRatBN7.2 Ensembl	5	153,995,589 - 154,035,283 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000125439 ⟹ ENSRNOP00000111109

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	159,272,625 - 159,286,746 (-)	Ensembl

RefSeq Acc Id:

NM_001395586 ⟹ NP_001382515

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	159,272,625 - 159,318,310 (-)	NCBI
mRatBN7.2	5	153,989,591 - 154,035,283 (-)	NCBI

RefSeq Acc Id:

XM_006239305 ⟹ XP_006239367

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	159,272,630 - 159,318,365 (-)	NCBI
mRatBN7.2	5	153,989,596 - 154,035,342 (-)	NCBI
Rnor_6.0	5	160,230,958 - 160,282,836 (-)	NCBI
Rnor_5.0	5	163,945,355 - 163,995,230 (-)	NCBI

Sequence:

show sequence

AGACGGCCTCGCAGGCGGGTGGCGGCGGCCGCGCTGGCTGCTGAGGGCGGGAGCGAGTGAGTCA
CTGCGCGCGTGTGAGGGAGGGAAGGAGCGAGCGAGCGAGCAGCCCGCGCCCGCCGCCCTCCCGC
AGCTCCCGCCAGGCCCCCCGCCGCCGGCTGCCCTCCGCCCAGGCCGGGCCGAGCCGAGCCGGGT
CGGGCCCGGGCCATGCTGCTCACCGTGTACTGTGTGCGGAGGGACCTCTCCGAGGTGACCTTTT
CCCTCCAGGTCGACGCCGACTTCGAGCTGCACAACTTCCGCGCGCTGTGCGAGCTCGAGTCCGG
GATCCCTGCCGCCGAGAGCCAGATTGTCTACGCAGAAAGACCTCTCACGGACAACCACAGGTCA
CTGGCTTCTTACGGTTTAAAAGATGGCGATGTTGTAATTCTGCGACAGAAGGAGAATGCAGACC
CTCGCCCTTCAGTGCAGTTCTCAAACTTACCCCGGATTGACTTCAGTAGCATAGCTGTGCCTGG
TACGTCAAACCCCCAACAGCGCCAGCTGCCCAGGACACAGGCTCAGCTCTTGTCTCCTGGGGAG
AGAACATCGACTCCTCAGGGTTTAGACAGCCCAGCCCTGCTCCGAGACATGCTGCTGGCCAACC
CACATGAGTTGTCCTTGCTGAAGGAGCGCAACCCACCCTTGGCAGAAGCTCTGCTCAGCGGTGA
TCTTGAAAAATTCTCTAGGGTCCTGGTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAACAAGAA
CGCATTCGTCTGTTTTCTGCTGACCCCTTTGATCTTGAAGCTCAGGCAAAGATAGAAGAAGACA
TAAGGCAGCAGAACATCGAGGAGAACATGACCATAGCTATGGAGGAGGCCCCGGAGAGCTTTGG
GCAGGTCGCCATGCTCTACATCAACTGCAGAGTGAACGGGCATCCTGTGAAAGCCTTCGTTGAC
TCAGGTGCCCAGATGACTATTATGAGCCAGGCCTGTGCAGAAAGGTGTAACATTATGAGACTGG
TGGACCGTCGGTGGGCTGGCATTGCCAAAGGAGTGGGCACGCAGAAGATTATTGGAAGGGTGCA
TCTAGCTCAGGTTCAGATTGAAGGCGATTTTCTGGCATGTTCCTTCTCGATTCTGGAAGAACAG
CCTATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCATCAGTGTTCTATTGACTTGAAGA
AAAATGTCCTGGTGATTGGCACCACAGGCTCACAGACCACCTTCCTTCCTGAGGGGGAGTTACC
AGAGTGTGCTCGCTTGGCATATGGAACTGGGCGAGAGGACATACGGCCAGAGGAAATTGCAGAC
CAAGAATTAGCAGAAGCCATTCAAAAATCAGCTGAGGATGCAGAGAAAAGCAGTAAAGAATCTA
CCTCACTGGGAACGCCATCATTGCTGACTTCAGAAGGACTCAACCATCCAGCTCCTTCAGGGCA
CAGTCCTGAGGTTGGTAGCCCTACGAGTCTCGCTCGCTCTGTCTCTGCTTCCGTCTGCGCCATC
AAGCCCAGTGACCCCAATAGCATTGGATCTCCAGCTGTGGAGGCGACAAAGGCTTCAGCTGAAT
TCCAGACAAACTCTAAGAAAACAGACCCTCCTCTGCAGGTCCTCCCTGATCTCGCTTCCTCGGC
AGAACGGAGTCTGGCTATGCCTTTGCATAATTCATCAGACGAAGCATTTGTTACAGGTAATTTG
GAGAAATCTGCTGAAAAAAGAACCCAGGGCCTCAGAGTTTATCTCCACACAAGACAGGACGCTA
GTTTATCTCTCACAACTACTGGGACGCATGAGCCACAGATATTTGTGGAGGAAAAGAGTTGGCA
TCCAGAAAATCAGAACTCAAGTCAAGTGAACGGCCTTCAGCAGCACAGAGAAACAGAGCGTGTG
CAGCGTGAGCCTGGAGCGCAGAGCGTTCCAGGTGACCGGGAGTGTCTCTGTCACACAGAAGACC
TTGAGCTTCAGGAAGAAGCTGTCGGTTGGGAAGCTGTGATGAAAGGCAGTGGGGCACTACTGAG
CACCGCTCATCTTCTCAGTGCAGAGGAAGGTCTTCCAGCTCCAGGGCGCTGTAGCTGCTCCTGC
TCAGAAGCCCTGATGGAGGTGGATACAGCTGAACAGTCTCCAGTCGCTAGCTGCAACTCCACAG
GCAGGCCCGTCATCACGAGCCCAGGTGTGTCACATGTCACTTCAGAGCATCCCTCTATGGAAGT
AGAAACGTCACAGTGTAACCTCTCCTGTGACCGCGTGGAACATTCCATCTTGACTCGGGATTTG
CAGCTCCCAGATAATGTTGAAATGTCTACAATGGATAACAAAGATGACCGCTCCTCTTCCCCTC
TCAGTGGCCATGGTCAGCCCTCTCTGGAGTCAGCAGAAGAATTTTGTTCATCTGTCACAGTGGC
CTTGAAAGAACTACATGAGCTTTTGGTCATTAGCTGTAAGCCAGCTTCAGAAGATTCACCTGAG
GACATCACCTGTCAGTCAGAAATAGCAGCTGAGAGCCAAGCAAGCATTTCAGACCTTACAGGCA
GGAGTACCCAAAGCGAGCATCTGACCCCTAGTGACCAGCACCCACAAGTCTCCTGTCCCCAGGC
CACCTCTGAGTCAGAAAAGACAGAAATCTTAGGAGCTGCACCCCATGCTGCGGGAGAAGATGAT
ACATCCACTGGCTTTGGAGGTCTAGGTGATGGCTTGTCACCTGGCCAAGAAGGCCTCCCCAGAT
CAACAGAGTCAGTCAGGAAGAGCTGTTCTGTTGCCATAACCTCGGCTAAACTGTCTGAGCAGTT
GCCCTGCACCTCAGGTGTGGAGAGCTCACTGGAGCTTGCAGCAGGTGAGGAGGGGGCCCACAGT
CAGCCTTCTGAGCATGTGCAGAATCCAGGCCCAGACAGGCCCGAGACCAGCACTGTCTGCCCCG
GAGCTGTGTTGCCCTTCGGTGGATTGGACCAACCTACCACACAGTCCTTGTCCACTCCCTCTAC
TCTTCCACCCTTTGTCTTTCCTGCTGCAGATGTGGACAGGATTCTTGGTGCCGGCTTCACTCTG
CAGGAAGCTCTCGGGGCTTTGCATCGAGTTGGTGGGAACGCAGACCTTGCACTTCTTGTTTTGT
TAGCAAAGAACATTGTAGTCCCTACATAATTGTGGGAAAGTGGGCTAGGCCACGTCTCATTCCT
TTTGAAAAAGCCCTTTTCACACAAATATGCTCAATACACATTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCATACACACACAATATGTGTAGAAAATCTGCAAGCAAAATGTTGAGCCAGATTTTT
TTTCCGGCCAAAGTAATTTATGATCTTTTGTCTGATGAATTTGTCTATCCTACTTGTTAAATTT
TGGGCCTTTTAATTGTATTGGCAGTGTGTGCATACAAAAGCTTTTTATTCTCATTAAGATGATG
TATTCTGGAATAAAGCGGATGGTTTTGTGTATAGCACACCATTTTAGAATGAGTGAATGCTTTG
AAAGCAGGAGTCATGAGGAGCCTGCCTGCCACCTATGGAGCTAGGACAGATGAGCTGCCGTGTG
GCTCTGGCTGTGCTGCGTGCAGGTATGGGCTGTTAACAGGAAGCTGGAGAAGAGAACTTTAGAG
TTGGATGTTTTAAGGAGAAGGTAATAACTTCCAGAGTTGTATGTTTTGATTTGTGTGCTCAGGG
TTGACATTTAAATAGGGTGAGTGGGAGGGCTTAAACCTTGGGCTGTCTTGTGCATCATAGGCTG
CTGCATGGACTGATTGCCAAATACTTTCATGACCATGGGTAGTGTGTGGGGAAATTCACATGAG
AGTGAAACATGGTGCTACTTGTATTTAAAAAGGGAAGGGGAAACCGTGGTCGTAATTCCATTTG
TAAGTGTCAAGGACTGTGAGTTAAAGATAATGGCTTAGACAAACATGGGCGTGTACTAGAGACA
GGGTTGAGGTATCTCACACCCTCGTTCGCTGGTAGTGATCGGGGTTTGACCACCAGGAACCTGC
TGGCTGTGTAAACTCATCTGCTAAGACGTTGTTCCCGTGTTCAGTCGAGCCATGTGAGACAGCA
CTGGAGAACCTTTGTCCCTGTCCTCTCAGTGCATGGACCGAGAGTCCGTGAGTGTCCCTCGTGG
CAGTGGAAAAACAATGGAAGTTCTGACAACAGTGGCCTTGGTACAGTCTTCATCCCTTTCTTTC
CTCAGGAGTTTCTTTTCTCAGCAGGATCCATGTTTGTGTTCATCGAGCTGAGCTGGAGTGGGGC
AGAATGTGTAGCTGTGTATTGTGGCCTTTTTAGTGTCAGCTCTCGCCTTGCAAGTCGCTGTCCC
ATGGGCCCCACTGTGCAATAATCACTCCAGATAGGTTTTCGAGCATCCTCTCCTGGAACAGTAA
CTGTTGTCTGAGGTGTCTGACAGGAATCCGGAATCTTGCTCTTCTTGAAAAGGATTTTGAGGAT
AATTCCTGGTTCTGGAATGAGAGTTTGCAGTCATTAAAATGAAAGTGTTGAAATTGAATTCTGA
ACTGATTCTGTCTAAAAGTCACTATCCCACCACCACCACCCTCTCTCAAAGCTTTTTTTTTTTT
TTTTAAATCCATCAAAATTGAAGTCCTCGAGCACAGACGGGTTCATGTCTCAGGAGTTTTGGAG
CATTGGGGGCACTGACAGGGGTCTCTGTTCTTTGGTCTGTTCTTTTTGCTGCATTGTTTGTGTG
CCGAGGCACTTCAGTGACATGGTGGCAAGTCACACCAAGCATCATGATCCTTTCTGGAATTAGG
ACATGGTTGCCGGATGGCCTTGTGGCTTCCTGCTCTCTCCATCGGGCCCTCAGAACATCAGGCT
AGCCGAGCTATCTTTGAGAAAAGCTTTGTCAGATGAGCACGGCATGTCCGCCTTTTGCCTGTTC
TACACCAAAGATGTATGTGTGATTCACTAGGAAAGTGCTCCCAGGATTCTGTCACCTGACTCAG
AGCAGAGCCTGAGGCAGAGGCAGAAGCAGGCAGTGCGTTGACGCCTGGCATTGGCTTGAGGTGG
GGAGGGGGTGAATTTTAGAGTCAAAAATCTTTGGGGTTACAGGGTGGGGTGGACAGAAGGAAGT
ACTGATGACAGACTCCTCCCAGAAGGCAGAAGAGATCGGCATGCAAAGTCGGTGTGGCCACTGA
CTCCGCCACGGACGCTTGCTGGGGAGCAGCCCTAGCTGGATTATAGAATCCAGTCTGGAAAAGT
TTTCTTTACAATAGCCTTTACATATGTACTTGTCTAAAAATAACCATTTTAGAAGCAGTTTGAT
GGGCCAATGATTGTACAGGCGTTCCTAGGAATCCTTTGAATGAGCTTGATGCACTTGCCAAATC
CTTTGTTCCTTTGGTGGTTTTCTTTGCAACAGATAGTTGCTTTTGATTCTTAAGATCTGTCAAA
TGTAAGCAAAATCGAAGGCCAGGCACGCTGACACACCTTTCACTCTAGGAGTGTTCACTAATGA
ACTCTGAGTTCATTAGTGAGACCCTGTCTTTTCAAAAGGAGATTTAAAAAAAAAAATCTTTCGT
CTGAAGTTTGTATAAAGTTAGGAATTTGTTATTAATTGATTGGCTTAAACTGAGCGAGAGGACA
GAGGACATTGTGGACAACATCACATTAGTGGCACTTCAGAGTCAGCTTTCACTTAGTCACTCTA
CCAAGAGTACAATGACATCATTGTGAAACCTAGTGCTGAGCCAGCCAGATGACACCTGTAACTA
ACGGCAAGGGCAGCTCCTGGTCCAGACCCTTGTCAGGTGTTCCGTGGTGGCTGCTTACCTCCTG
CAGCGGTCTCCATTCACGCACCGAAGGGCTTTCTTGTAAAACTGAAGACACAAGCTGAAGGGCG
GGAGAGAGGGCCCTTTGATTCTGGGAAGGGCCATTTCAGGACGTGCTGGCCGCCCTCTGCAGCG
GCCGAAGCCTTCCTCTGGCGGGCTGAGCTCCAGATGCTGACGGGTGAAGGCAGGAGTAGGTGCC
TGGCAAAGGAAGCTTTAGTGGATGGTTAGTGGTGTGTGAGAACCTCTGCCTCTGGTCATCTCTA
GACGCAGGAAAGGGGAGAGACAGCCCTGGGTGTCTACCCAAAACATCCTGGCAAGATGATGCCT
AGGAATAGGTAGGGGACCTGGTGTCGTGGATTTTGACTGGCTTGCATAGCATCTGCCTGTTAGT
CCCTCTCTACAGCTTTCTATCTCTAGCGGAAGCCATAAGAATTTGTTTCAACTTTTCAGCTCAT
GTCTATAAATAAATACTAAGCTATCTCAAATCTAAGGTGATTGATAAATACTTTACATAGGTTG
AAAAGCAGCTCTTGTGTCTACAGATACCTGCACGCCTGGTGGCTTTTCTTCCTACTCTGTACAT
AGTAAACTGCCTTGGACAGGGCAGTACACGAGCGTCTAGGCAAGTTTCCTTTTCTGTCTTGTGT
TTTCTTTGAGACAGGATCTCGCCATAACCCAGGATGGCCTCAAGCTCATGGCGGTTTCTCTGCC
TCGGCCTTTAGGATGCTAGGATCGCAGGTGCACATAGCAATGCCCAGTTCACTCAGCGCATTCC
AGTGGCTACCTGTGGTGGGCATAAACAATGTGGCCGACTGGCTGGTGTATCACTAGCAGCCCAT
AGGGCCGAGGGGTGCGGCTTGGTGGAACTCCTGGGGAGCATGTGAGGTCCTAGGTTTGATCCTT
ACCACCGGAAAAAGTAAAAGTCAGTCTTGGGATTTAATAAAGTCCGAGGCTGACTAGAACCCTG
TAATTTCCCTCTCTCAGTAGTTAACATAACAGCATTTGGTGTTTCCTACATCCCCTCTGAATTA
CCTGACTCCCAGAGTGTCTGTAGAGCCGCAGTAAGGACTTTGGGGTGAGCCTTTGATGTACTTG
CTTTTCTTTCGTGCCTTAATTTTTTTGAATAGCAGAAGCATCACATCTTGGGAGTATCGGGGAA
AGGTTAGAGGGCAGCCCTCCTGGAGAGGACTGACTGCCACTAGATGTGGTCCTTGGCTCCTTAC
CACTTTGATTCACCCTTGCCTGCTTCAAACATTAGGTTTTCCCGGGTAGGAGTTTCTGCATCCT
GTATACCAAAAAATGGTTTCTAGTGTTTCTTGTTTTCTGTTGCACCTTTTGTGCTGTGATAGGG
AGAGACCAAATCTTACTCCTCCCATCAAAGCTATGCAGCATGAGCAAGGGTTCATCAGTGTTCA
TCAAGCATGGACTGTAGCTCAGCAGCAGCCAAACCAGACAGGAGCCTGGGCTTCGAAGCCTTCG
GGGAGATACGGGGCAGTTTTGAACTAAGATCTGTTTTTCCTATTAGCATGCTATTCCACCCCCG
CCCCGGCATGCTTTTGTTTTTGAGGAGACTTCTTACAGCCCAAACTGGCCTTGAACTAGCAATC
CTAAAGTAGCTGGGTTCACGAAGTCGTAGGCACACTCTGTAATATCCAGGTAGCATGCTTTCAT
TTTTAAACTTTGTTATATGGTTGCAGGTTAGAGCCCACTGGGAGGGGGAGAAAACAAGCCCATG
ATGGAATTCAACGCTGTAAACCTAGAGTTGTACTCTAAAGTGCTTAGTTTTAGTGTTGTTTTAA
ACAATTGGGGGCTGGTGTGGTGCCACACACCTTTAAGCTGTAAGTGCAAGGCCAGTCAGGGCTA
CAGAGAGGAACCGTCTTAAATCAAAAAAATGAATAAAAACAGTTGAGGGTGTAGGGCAATAGCA
CGGTGGTAGGCAGAATGCTTGCCTAGCTGCAGGAAGTCCTCAGCCCAGCCCCCAGCACTGCATA
AGCCACGTGCGGGGTGCCGGTAATTCCCAGCACTGGAGACAGGAGAGAGAAGCAGAAGTTCAAG
GTCATTCTTGACTGCGTGGGTTACATGAAACCCTGTCACTTAAGAGTGGGTAAAGGGTCAACTG
TAGCTCAGTGGTAGAGCACTTGCCTGACATGTACAAGGCCCTGGGTTTGACTCCCAACACTGCA
CAGAAAGGATTTTTTTTTAAAAGATTAGTAGAAATAACTGAAGATGCTGAGGAGTTGGTGTATA
AAGCTGTGGACAGGAAGGCACAGGCAGGAGAGGTGTCCCGTGAAGGAACTGGGGGGATAGCTGT
TTCCCTTCAGGACGCAGGGTCCCATGCAGCACTTAAGATAGGCGAGTGTAACCCCGCCAACCCC
CAGGGAGCAGAACTCAGCCGAGGCCTCTGCAGGATGTGCAGTGTGGACAAGAGAATCCGGAGCA
GAAGTGACCGGGTGTTGGGATGGGCAGACAGGATTGCTCTGCCAGCTCCACAAGACTTCAACCC
TCCATTTAGGATAGCGGGTGTGTGCACCCCTGAAGCATAGCTTTCCGGTTAGGAAATATGCTTA
AAAGTTGTTCAGTAATTAAACGTGAGGGTTGGGGGTTTGTGAAATGGGGGAGGGAGGCTGGGTG
AGTTTTAGGACACCATCTGGGTCAAACTTACCAAGAAAACGATGGATCAGCATAGGAGTTTCTT
TACCTGCAAAGTGTGGACCACAGACCGGAAGGCATCGAGCATGAGATCAGACGGCTTCTTACTG
TGATTAAGCAGCCGAAGGAGGTTTTGATTGGGTGACTTGGGTGAGGGGCGTGTCCCCTTTGCCC
TGTCAGGTGATGGGCAGGGTTTGGTTGCCTGAAACCTGCAAACTTGAATGAGTGTGTCTGTGAC
CTGCAGAACAGACCTGTGTCCCTACAGGAGCCAGCCAGATGTGTGTTCACGGGCTCCCTGAGCA
GTCCTTATAACCCGGAAGACATGTGGCCTCACACTCTTCCACCCGACTAGCGAGGCTTGTGCTC
TCTCCCTGTATCCCCCGGGCGTGCGTTCACTCTGGTGAGACATCAGAGGGAATCTGTTGCGTTG
GGTGAATCTCCTCTACATGTACTTTCCTTGGGAAACTATTAGTGCATTTGTATCCAGATCTCTC
CATGGCAACCTGGACCCGATGGCTTCAACCCCCAGCAAAGGTTCCCTGGTTTTCTAGCCACAGT
TGACAGATTGTAACTAGGAAGCCCTCTTTGGCTTCCTGCAGTTGCCTGAGTGTCATGAGGTTTT
CTGGCTTCTCCTTAAGCTTTGACACTACGTCTTTTGAGATCTAGTCTGGTTAGCAAAATCTGCA
TGCGAGTGGCCCACCCAGCCATGCCCAGATGCTTTGAGAGTTGGGAAAACTGAGAACTGATAAG
CTGCACTCAGGAATCCCAAGGTCAGTCGCTGTGTGTGCTAACTGGTTAGGACTGTCTGCAGCTG
AACGCACTAGATGCCTTTGAGTTTGATTTTTTTGTTTTTTGTTTTTTTGTTTTTGTTTTTTTTT
TTTGTCATATTTTGAAATGTAAGTCAGCCCTGAATAATCCAAACACTTTATTTTATTTTTCTTC
TTTAATAGGAACTTTCTGAAGAAAACGTGATGTGTAAAACCTTTGATATTTAAGACAATAAAGT
TTTTATCATAAGA

hide sequence

RefSeq Acc Id:

XM_006239306 ⟹ XP_006239368

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	159,272,630 - 159,310,608 (-)	NCBI
mRatBN7.2	5	153,989,596 - 154,027,586 (-)	NCBI
Rnor_6.0	5	160,230,958 - 160,275,140 (-)	NCBI
Rnor_5.0	5	163,945,355 - 163,995,230 (-)	NCBI

Sequence:

show sequence

AGTTATGTATAAAATTTGTAAAATTGGACAGACAAGTTCTGTTCTCTTGTCTCTAGAAGGATTC
AGTTTTGAAGAGTCACTTTTTGCCCTGTCACCACAGACTTGGGAGCAGAATGACAGTGAATGGT
CAGAGTGGCCCGTGTAGGTGCTGTCTGCTCGCCCTGTGCCTAGGACCTTTGCTAAGAGAGCGTG
TGGGTGGATGAGGGAGGCTTGGCGGTAGAGCTCAGCGGTAGACAAGTTGCTGACCAGGTACAAA
GCCCTGGACTTAGCTTGGAAAAGGAACCAGAAGGGACATCTGTTGTGATCAGTCCTGGTGGCTT
GCTGGACACAAGAAATTTGACTCTTGGCCCACCTAGTGGCAGGGCCCCTCCCAGAGTTCCTGGC
TGAGTTAATACCCAGCTCAGGTTGCTCTGTTGGCTCGTGGCCCAGTGCAGAGTCTACTCAGGGT
GCTGCTGTGGCTCAGGCCCCAGTCTGTTCTGCGGACTGTGTGATGACATAGGGGCCACGTCACA
CCCTTATGTGGCTATGTCAGGGTGCCGCTGTGTGTTCCATCCCTTCTTCCCCTCATACTGCTCT
CTGCTGTTGTACTATGATTGGCTCGCGTGTTTCCTTTCCTATTTATGTTTCTTTCACAAGCGGG
AGTGCGATTGTCTACGCAGAAAGACCTCTCACGGACAACCACAGGTCACTGGCTTCTTACGGTT
TAAAAGATGGCGATGTTGTAATTCTGCGACAGAAGGAGAATGCAGACCCTCGCCCTTCAGTGCA
GTTCTCAAACTTACCCCGGATTGACTTCAGTAGCATAGCTGTGCCTGGTACGTCAAACCCCCAA
CAGCGCCAGCTGCCCAGGACACAGGCTCAGCTCTTGTCTCCTGGGGAGAGAACATCGACTCCTC
AGGGTTTAGACAGCCCAGCCCTGCTCCGAGACATGCTGCTGGCCAACCCACATGAGTTGTCCTT
GCTGAAGGAGCGCAACCCACCCTTGGCAGAAGCTCTGCTCAGCGGTGATCTTGAAAAATTCTCT
AGGGTCCTGGTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAACAAGAACGCATTCGTCTGTTTT
CTGCTGACCCCTTTGATCTTGAAGCTCAGGCAAAGATAGAAGAAGACATAAGGCAGCAGAACAT
CGAGGAGAACATGACCATAGCTATGGAGGAGGCCCCGGAGAGCTTTGGGCAGGTCGCCATGCTC
TACATCAACTGCAGAGTGAACGGGCATCCTGTGAAAGCCTTCGTTGACTCAGGTGCCCAGATGA
CTATTATGAGCCAGGCCTGTGCAGAAAGGTGTAACATTATGAGACTGGTGGACCGTCGGTGGGC
TGGCATTGCCAAAGGAGTGGGCACGCAGAAGATTATTGGAAGGGTGCATCTAGCTCAGGTTCAG
ATTGAAGGCGATTTTCTGGCATGTTCCTTCTCGATTCTGGAAGAACAGCCTATGGACATGCTTC
TGGGACTGGACATGCTTAAACGGCATCAGTGTTCTATTGACTTGAAGAAAAATGTCCTGGTGAT
TGGCACCACAGGCTCACAGACCACCTTCCTTCCTGAGGGGGAGTTACCAGAGTGTGCTCGCTTG
GCATATGGAACTGGGCGAGAGGACATACGGCCAGAGGAAATTGCAGACCAAGAATTAGCAGAAG
CCATTCAAAAATCAGCTGAGGATGCAGAGAAAAGCAGTAAAGAATCTACCTCACTGGGAACGCC
ATCATTGCTGACTTCAGAAGGACTCAACCATCCAGCTCCTTCAGGGCACAGTCCTGAGGTTGGT
AGCCCTACGAGTCTCGCTCGCTCTGTCTCTGCTTCCGTCTGCGCCATCAAGCCCAGTGACCCCA
ATAGCATTGGATCTCCAGCTGTGGAGGCGACAAAGGCTTCAGCTGAATTCCAGACAAACTCTAA
GAAAACAGACCCTCCTCTGCAGGTCCTCCCTGATCTCGCTTCCTCGGCAGAACGGAGTCTGGCT
ATGCCTTTGCATAATTCATCAGACGAAGCATTTGTTACAGGTAATTTGGAGAAATCTGCTGAAA
AAAGAACCCAGGGCCTCAGAGTTTATCTCCACACAAGACAGGACGCTAGTTTATCTCTCACAAC
TACTGGGACGCATGAGCCACAGATATTTGTGGAGGAAAAGAGTTGGCATCCAGAAAATCAGAAC
TCAAGTCAAGTGAACGGCCTTCAGCAGCACAGAGAAACAGAGCGTGTGCAGCGTGAGCCTGGAG
CGCAGAGCGTTCCAGGTGACCGGGAGTGTCTCTGTCACACAGAAGACCTTGAGCTTCAGGAAGA
AGCTGTCGGTTGGGAAGCTGTGATGAAAGGCAGTGGGGCACTACTGAGCACCGCTCATCTTCTC
AGTGCAGAGGAAGGTCTTCCAGCTCCAGGGCGCTGTAGCTGCTCCTGCTCAGAAGCCCTGATGG
AGGTGGATACAGCTGAACAGTCTCCAGTCGCTAGCTGCAACTCCACAGGCAGGCCCGTCATCAC
GAGCCCAGGTGTGTCACATGTCACTTCAGAGCATCCCTCTATGGAAGTAGAAACGTCACAGTGT
AACCTCTCCTGTGACCGCGTGGAACATTCCATCTTGACTCGGGATTTGCAGCTCCCAGATAATG
TTGAAATGTCTACAATGGATAACAAAGATGACCGCTCCTCTTCCCCTCTCAGTGGCCATGGTCA
GCCCTCTCTGGAGTCAGCAGAAGAATTTTGTTCATCTGTCACAGTGGCCTTGAAAGAACTACAT
GAGCTTTTGGTCATTAGCTGTAAGCCAGCTTCAGAAGATTCACCTGAGGACATCACCTGTCAGT
CAGAAATAGCAGCTGAGAGCCAAGCAAGCATTTCAGACCTTACAGGCAGGAGTACCCAAAGCGA
GCATCTGACCCCTAGTGACCAGCACCCACAAGTCTCCTGTCCCCAGGCCACCTCTGAGTCAGAA
AAGACAGAAATCTTAGGAGCTGCACCCCATGCTGCGGGAGAAGATGATACATCCACTGGCTTTG
GAGGTCTAGGTGATGGCTTGTCACCTGGCCAAGAAGGCCTCCCCAGATCAACAGAGTCAGTCAG
GAAGAGCTGTTCTGTTGCCATAACCTCGGCTAAACTGTCTGAGCAGTTGCCCTGCACCTCAGGT
GTGGAGAGCTCACTGGAGCTTGCAGCAGGTGAGGAGGGGGCCCACAGTCAGCCTTCTGAGCATG
TGCAGAATCCAGGCCCAGACAGGCCCGAGACCAGCACTGTCTGCCCCGGAGCTGTGTTGCCCTT
CGGTGGATTGGACCAACCTACCACACAGTCCTTGTCCACTCCCTCTACTCTTCCACCCTTTGTC
TTTCCTGCTGCAGATGTGGACAGGATTCTTGGTGCCGGCTTCACTCTGCAGGAAGCTCTCGGGG
CTTTGCATCGAGTTGGTGGGAACGCAGACCTTGCACTTCTTGTTTTGTTAGCAAAGAACATTGT
AGTCCCTACATAATTGTGGGAAAGTGGGCTAGGCCACGTCTCATTCCTTTTGAAAAAGCCCTTT
TCACACAAATATGCTCAATACACATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATACACA
CACAATATGTGTAGAAAATCTGCAAGCAAAATGTTGAGCCAGATTTTTTTTCCGGCCAAAGTAA
TTTATGATCTTTTGTCTGATGAATTTGTCTATCCTACTTGTTAAATTTTGGGCCTTTTAATTGT
ATTGGCAGTGTGTGCATACAAAAGCTTTTTATTCTCATTAAGATGATGTATTCTGGAATAAAGC
GGATGGTTTTGTGTATAGCACACCATTTTAGAATGAGTGAATGCTTTGAAAGCAGGAGTCATGA
GGAGCCTGCCTGCCACCTATGGAGCTAGGACAGATGAGCTGCCGTGTGGCTCTGGCTGTGCTGC
GTGCAGGTATGGGCTGTTAACAGGAAGCTGGAGAAGAGAACTTTAGAGTTGGATGTTTTAAGGA
GAAGGTAATAACTTCCAGAGTTGTATGTTTTGATTTGTGTGCTCAGGGTTGACATTTAAATAGG
GTGAGTGGGAGGGCTTAAACCTTGGGCTGTCTTGTGCATCATAGGCTGCTGCATGGACTGATTG
CCAAATACTTTCATGACCATGGGTAGTGTGTGGGGAAATTCACATGAGAGTGAAACATGGTGCT
ACTTGTATTTAAAAAGGGAAGGGGAAACCGTGGTCGTAATTCCATTTGTAAGTGTCAAGGACTG
TGAGTTAAAGATAATGGCTTAGACAAACATGGGCGTGTACTAGAGACAGGGTTGAGGTATCTCA
CACCCTCGTTCGCTGGTAGTGATCGGGGTTTGACCACCAGGAACCTGCTGGCTGTGTAAACTCA
TCTGCTAAGACGTTGTTCCCGTGTTCAGTCGAGCCATGTGAGACAGCACTGGAGAACCTTTGTC
CCTGTCCTCTCAGTGCATGGACCGAGAGTCCGTGAGTGTCCCTCGTGGCAGTGGAAAAACAATG
GAAGTTCTGACAACAGTGGCCTTGGTACAGTCTTCATCCCTTTCTTTCCTCAGGAGTTTCTTTT
CTCAGCAGGATCCATGTTTGTGTTCATCGAGCTGAGCTGGAGTGGGGCAGAATGTGTAGCTGTG
TATTGTGGCCTTTTTAGTGTCAGCTCTCGCCTTGCAAGTCGCTGTCCCATGGGCCCCACTGTGC
AATAATCACTCCAGATAGGTTTTCGAGCATCCTCTCCTGGAACAGTAACTGTTGTCTGAGGTGT
CTGACAGGAATCCGGAATCTTGCTCTTCTTGAAAAGGATTTTGAGGATAATTCCTGGTTCTGGA
ATGAGAGTTTGCAGTCATTAAAATGAAAGTGTTGAAATTGAATTCTGAACTGATTCTGTCTAAA
AGTCACTATCCCACCACCACCACCCTCTCTCAAAGCTTTTTTTTTTTTTTTTAAATCCATCAAA
ATTGAAGTCCTCGAGCACAGACGGGTTCATGTCTCAGGAGTTTTGGAGCATTGGGGGCACTGAC
AGGGGTCTCTGTTCTTTGGTCTGTTCTTTTTGCTGCATTGTTTGTGTGCCGAGGCACTTCAGTG
ACATGGTGGCAAGTCACACCAAGCATCATGATCCTTTCTGGAATTAGGACATGGTTGCCGGATG
GCCTTGTGGCTTCCTGCTCTCTCCATCGGGCCCTCAGAACATCAGGCTAGCCGAGCTATCTTTG
AGAAAAGCTTTGTCAGATGAGCACGGCATGTCCGCCTTTTGCCTGTTCTACACCAAAGATGTAT
GTGTGATTCACTAGGAAAGTGCTCCCAGGATTCTGTCACCTGACTCAGAGCAGAGCCTGAGGCA
GAGGCAGAAGCAGGCAGTGCGTTGACGCCTGGCATTGGCTTGAGGTGGGGAGGGGGTGAATTTT
AGAGTCAAAAATCTTTGGGGTTACAGGGTGGGGTGGACAGAAGGAAGTACTGATGACAGACTCC
TCCCAGAAGGCAGAAGAGATCGGCATGCAAAGTCGGTGTGGCCACTGACTCCGCCACGGACGCT
TGCTGGGGAGCAGCCCTAGCTGGATTATAGAATCCAGTCTGGAAAAGTTTTCTTTACAATAGCC
TTTACATATGTACTTGTCTAAAAATAACCATTTTAGAAGCAGTTTGATGGGCCAATGATTGTAC
AGGCGTTCCTAGGAATCCTTTGAATGAGCTTGATGCACTTGCCAAATCCTTTGTTCCTTTGGTG
GTTTTCTTTGCAACAGATAGTTGCTTTTGATTCTTAAGATCTGTCAAATGTAAGCAAAATCGAA
GGCCAGGCACGCTGACACACCTTTCACTCTAGGAGTGTTCACTAATGAACTCTGAGTTCATTAG
TGAGACCCTGTCTTTTCAAAAGGAGATTTAAAAAAAAAAATCTTTCGTCTGAAGTTTGTATAAA
GTTAGGAATTTGTTATTAATTGATTGGCTTAAACTGAGCGAGAGGACAGAGGACATTGTGGACA
ACATCACATTAGTGGCACTTCAGAGTCAGCTTTCACTTAGTCACTCTACCAAGAGTACAATGAC
ATCATTGTGAAACCTAGTGCTGAGCCAGCCAGATGACACCTGTAACTAACGGCAAGGGCAGCTC
CTGGTCCAGACCCTTGTCAGGTGTTCCGTGGTGGCTGCTTACCTCCTGCAGCGGTCTCCATTCA
CGCACCGAAGGGCTTTCTTGTAAAACTGAAGACACAAGCTGAAGGGCGGGAGAGAGGGCCCTTT
GATTCTGGGAAGGGCCATTTCAGGACGTGCTGGCCGCCCTCTGCAGCGGCCGAAGCCTTCCTCT
GGCGGGCTGAGCTCCAGATGCTGACGGGTGAAGGCAGGAGTAGGTGCCTGGCAAAGGAAGCTTT
AGTGGATGGTTAGTGGTGTGTGAGAACCTCTGCCTCTGGTCATCTCTAGACGCAGGAAAGGGGA
GAGACAGCCCTGGGTGTCTACCCAAAACATCCTGGCAAGATGATGCCTAGGAATAGGTAGGGGA
CCTGGTGTCGTGGATTTTGACTGGCTTGCATAGCATCTGCCTGTTAGTCCCTCTCTACAGCTTT
CTATCTCTAGCGGAAGCCATAAGAATTTGTTTCAACTTTTCAGCTCATGTCTATAAATAAATAC
TAAGCTATCTCAAATCTAAGGTGATTGATAAATACTTTACATAGGTTGAAAAGCAGCTCTTGTG
TCTACAGATACCTGCACGCCTGGTGGCTTTTCTTCCTACTCTGTACATAGTAAACTGCCTTGGA
CAGGGCAGTACACGAGCGTCTAGGCAAGTTTCCTTTTCTGTCTTGTGTTTTCTTTGAGACAGGA
TCTCGCCATAACCCAGGATGGCCTCAAGCTCATGGCGGTTTCTCTGCCTCGGCCTTTAGGATGC
TAGGATCGCAGGTGCACATAGCAATGCCCAGTTCACTCAGCGCATTCCAGTGGCTACCTGTGGT
GGGCATAAACAATGTGGCCGACTGGCTGGTGTATCACTAGCAGCCCATAGGGCCGAGGGGTGCG
GCTTGGTGGAACTCCTGGGGAGCATGTGAGGTCCTAGGTTTGATCCTTACCACCGGAAAAAGTA
AAAGTCAGTCTTGGGATTTAATAAAGTCCGAGGCTGACTAGAACCCTGTAATTTCCCTCTCTCA
GTAGTTAACATAACAGCATTTGGTGTTTCCTACATCCCCTCTGAATTACCTGACTCCCAGAGTG
TCTGTAGAGCCGCAGTAAGGACTTTGGGGTGAGCCTTTGATGTACTTGCTTTTCTTTCGTGCCT
TAATTTTTTTGAATAGCAGAAGCATCACATCTTGGGAGTATCGGGGAAAGGTTAGAGGGCAGCC
CTCCTGGAGAGGACTGACTGCCACTAGATGTGGTCCTTGGCTCCTTACCACTTTGATTCACCCT
TGCCTGCTTCAAACATTAGGTTTTCCCGGGTAGGAGTTTCTGCATCCTGTATACCAAAAAATGG
TTTCTAGTGTTTCTTGTTTTCTGTTGCACCTTTTGTGCTGTGATAGGGAGAGACCAAATCTTAC
TCCTCCCATCAAAGCTATGCAGCATGAGCAAGGGTTCATCAGTGTTCATCAAGCATGGACTGTA
GCTCAGCAGCAGCCAAACCAGACAGGAGCCTGGGCTTCGAAGCCTTCGGGGAGATACGGGGCAG
TTTTGAACTAAGATCTGTTTTTCCTATTAGCATGCTATTCCACCCCCGCCCCGGCATGCTTTTG
TTTTTGAGGAGACTTCTTACAGCCCAAACTGGCCTTGAACTAGCAATCCTAAAGTAGCTGGGTT
CACGAAGTCGTAGGCACACTCTGTAATATCCAGGTAGCATGCTTTCATTTTTAAACTTTGTTAT
ATGGTTGCAGGTTAGAGCCCACTGGGAGGGGGAGAAAACAAGCCCATGATGGAATTCAACGCTG
TAAACCTAGAGTTGTACTCTAAAGTGCTTAGTTTTAGTGTTGTTTTAAACAATTGGGGGCTGGT
GTGGTGCCACACACCTTTAAGCTGTAAGTGCAAGGCCAGTCAGGGCTACAGAGAGGAACCGTCT
TAAATCAAAAAAATGAATAAAAACAGTTGAGGGTGTAGGGCAATAGCACGGTGGTAGGCAGAAT
GCTTGCCTAGCTGCAGGAAGTCCTCAGCCCAGCCCCCAGCACTGCATAAGCCACGTGCGGGGTG
CCGGTAATTCCCAGCACTGGAGACAGGAGAGAGAAGCAGAAGTTCAAGGTCATTCTTGACTGCG
TGGGTTACATGAAACCCTGTCACTTAAGAGTGGGTAAAGGGTCAACTGTAGCTCAGTGGTAGAG
CACTTGCCTGACATGTACAAGGCCCTGGGTTTGACTCCCAACACTGCACAGAAAGGATTTTTTT
TTAAAAGATTAGTAGAAATAACTGAAGATGCTGAGGAGTTGGTGTATAAAGCTGTGGACAGGAA
GGCACAGGCAGGAGAGGTGTCCCGTGAAGGAACTGGGGGGATAGCTGTTTCCCTTCAGGACGCA
GGGTCCCATGCAGCACTTAAGATAGGCGAGTGTAACCCCGCCAACCCCCAGGGAGCAGAACTCA
GCCGAGGCCTCTGCAGGATGTGCAGTGTGGACAAGAGAATCCGGAGCAGAAGTGACCGGGTGTT
GGGATGGGCAGACAGGATTGCTCTGCCAGCTCCACAAGACTTCAACCCTCCATTTAGGATAGCG
GGTGTGTGCACCCCTGAAGCATAGCTTTCCGGTTAGGAAATATGCTTAAAAGTTGTTCAGTAAT
TAAACGTGAGGGTTGGGGGTTTGTGAAATGGGGGAGGGAGGCTGGGTGAGTTTTAGGACACCAT
CTGGGTCAAACTTACCAAGAAAACGATGGATCAGCATAGGAGTTTCTTTACCTGCAAAGTGTGG
ACCACAGACCGGAAGGCATCGAGCATGAGATCAGACGGCTTCTTACTGTGATTAAGCAGCCGAA
GGAGGTTTTGATTGGGTGACTTGGGTGAGGGGCGTGTCCCCTTTGCCCTGTCAGGTGATGGGCA
GGGTTTGGTTGCCTGAAACCTGCAAACTTGAATGAGTGTGTCTGTGACCTGCAGAACAGACCTG
TGTCCCTACAGGAGCCAGCCAGATGTGTGTTCACGGGCTCCCTGAGCAGTCCTTATAACCCGGA
AGACATGTGGCCTCACACTCTTCCACCCGACTAGCGAGGCTTGTGCTCTCTCCCTGTATCCCCC
GGGCGTGCGTTCACTCTGGTGAGACATCAGAGGGAATCTGTTGCGTTGGGTGAATCTCCTCTAC
ATGTACTTTCCTTGGGAAACTATTAGTGCATTTGTATCCAGATCTCTCCATGGCAACCTGGACC
CGATGGCTTCAACCCCCAGCAAAGGTTCCCTGGTTTTCTAGCCACAGTTGACAGATTGTAACTA
GGAAGCCCTCTTTGGCTTCCTGCAGTTGCCTGAGTGTCATGAGGTTTTCTGGCTTCTCCTTAAG
CTTTGACACTACGTCTTTTGAGATCTAGTCTGGTTAGCAAAATCTGCATGCGAGTGGCCCACCC
AGCCATGCCCAGATGCTTTGAGAGTTGGGAAAACTGAGAACTGATAAGCTGCACTCAGGAATCC
CAAGGTCAGTCGCTGTGTGTGCTAACTGGTTAGGACTGTCTGCAGCTGAACGCACTAGATGCCT
TTGAGTTTGATTTTTTTGTTTTTTGTTTTTTTGTTTTTGTTTTTTTTTTTTGTCATATTTTGAA
ATGTAAGTCAGCCCTGAATAATCCAAACACTTTATTTTATTTTTCTTCTTTAATAGGAACTTTC
TGAAGAAAACGTGATGTGTAAAACCTTTGATATTTAAGACAATAAAGTTTTTATCATAAGA

hide sequence

RefSeq Acc Id:

XM_006239308 ⟹ XP_006239370

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	159,272,630 - 159,283,572 (-)	NCBI
mRatBN7.2	5	153,989,596 - 154,000,536 (-)	NCBI
Rnor_6.0	5	160,230,958 - 160,242,383 (-)	NCBI
Rnor_5.0	5	163,945,355 - 163,995,230 (-)	NCBI

Sequence:

show sequence

GGAAGAGAGAAAGAGAGAGAAAAGAAAGAAAGGAGAGAAAGGAAGAAAAGAAAGGAGAGAAATA
GAGAGAGTCTTGAGCTTGGAATGGTGACACCTGCCCATATGCCACATCCTCAGAATGTCTAGGC
CTTGTCTCAAAAAAAAATATGTATATATATTTTGAGGAATTTGGAAAGCTACTATACTGGTTCA
CTAACCTGTGTAAAACGGGCTTTGAGCAGCTCTTGATGGATTGACTTTGCCTGGGGCACATTTG
CCTCCAGTGTGCAGAGCTGTGGAGTAATCCTTTCAGAGTACAGACACCGCGCTGGTTATGTTCG
GAGAGAGTTGAAGCTCCACAGTCTTTGGGATGCCACGCTGTGGAGACTCCTGCTTTCACAGATG
GGAAGGAGTGAGGACTGCAGCCCTGCATGCTGTGTGGTTTTGCATTGTTAACCCACGTTTGCTT
GTCTGTTTCCTAATCCAAACAGAGCGTCAGAAGCCATGATGCATGTAGTGTGTGTGTGCTGCAG
CTGGAGTGGGCCCAGACCAGGTATTTATAGACGCCACATTAACCTTCCGTCCAGTTGTCACCTG
TGCTCTGAAAAACTGTCTGCGATCATTCTGGAAACTCAAGACTTTGTCCTGTTCAATCTGGTTA
CAACTAGCCTGTATGTACATGTATACGTATGTTGCTGTATGCACACATGGCATAAATTCTGTTA
AAATGTGACTGGTTGTTGGAACAGTCCAGGGGGAAATCTTAGTGAAAAGTATTCAGTGCCTACT
ACCTCTGAGAGCCGAAAACACTGAAGAAGAAAAGAAGTGAATGCAGCACTGTCCCAGCAATTTG
TTGTAGATATATGATTCTTTTTAAACCTTTGGGGTTTGTTTTGTTTTGTTTTGTTTTGTTTTTC
AAAAAAGCTGGAAGTCCTCAAATGTTTGAAGTTCATAAAAAGGTTATGTTTTCATTTTATTGAG
CAGAAATGGGAAGTTGAACCAAATGGCTTCTCCAGAATCATAGGTGGTAATAGGTGGCCTGGGC
ATTGCTCGTGCTTTCTTGCCATCCCATTCTTTGGACGATGACACAAGAGGATCCAAGGTTTGAG
CCCAAGCTGAACTGTATAGTGAAAGCATCTTTAAAATAAATGTTGACATAATACACTTGCTAAT
TTTATCTGACAATCTGACACAGGGCTTTTTAAATAAGGGTTTGGAGGCTGGTTGTAATTAGATT
TATAGCATAATATTCATTCTGTCTGTCTGTCTCTGTCTCTCTCTCTCTCTCTCTGTCTCTCTCT
CTCTCTCATTTTAAGGACATTGGGCATAGTTGCTGTCCCTTAGCATTTTTTCCTAACCCCTCTG
GTACTAGTGTTTCAGTGCCAGAGGATGGCACACATGCTGCTCTGACAGTAAGTACAGTCTGCCT
GGGCACCTTCACCGCTCCTGCTTTTTTGGGGCGCACAGGTCCTTGACACTGAACCCAGATGGTA
CGTGATGCTGTGGTGCTGACCTGGACATTCTTTTGCAGTGTGCTCTTTTATGATAGCGTTAGTC
CAGAATTGAGTGTATTTCACAGTCGGCTGTATTGATTATTGGATAAAAACCTAAAGACTTGCTG
TATTTACAGGACGTAGTTTAAACAGAGACAAAACAATCCTATTTTTAGCCAATGTAAGGTAGTT
CCTTAAGAAGTCAGTCAGTGCCTTGAGGTGGTGCCACTGGGCTTTGATGCCAGCATTTGGGAGT
CAGGCAGGTAGATCCCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGTACAGCCAA
AGAAACTCTCGAAAAACAAACAGAAAGGACAGCATAGCTGCATGAGATCTGTCTCAACCCAAAA
AGAGAAGCCAACTTCGAGCATGGCCCAGCCTCTGACACAGCTCTGCAGGGATTAGTTGATTAGA
GTGACTTTTACATCGTAACTGCGCTCTCTGTGCCTTCGAGAGTGGAAATCCAGCTGATGTTAGT
GTTCAGCACAAAGCATCTGCAGTGAATTTAACAATCCAGGAGCCAATGTTTCCAGCTTGATAGC
AGTCTATGATTTTTAATGAAAGACACCATGGGTGGTTAGAGGCTAGTTTTTAATAGCACCAGAG
GAGTTGGACCACTGTGGTGTCCACACTGATGTCCCCATCATGTTTGAAGGGCAATCAAATTAGG
GTGAGTCTAAGTTATTGTTGCCTATCAGGAAACTATCACACTGTTCCATAAAGTCCTTGTTAAT
TCTGTTGTGCTGTATCAGAGTCACAGCCTTTGGAAGCTGGGTATGATTCTGCATGTTGTAATCC
CATCACTCAGACTAAAGCAGGAAACGCCACAAGTCTCAGGCTCAGCAGACTGCATTACAGAGCT
GGAGGTGTGGTTGGACTAGCAGAGAACCTCCTGGCATGGAGAAAAGCAGTAAAGAATCTACCTC
ACTGGGAACGCCATCATTGCTGACTTCAGAAGGACTCAACCATCCAGCTCCTTCAGGGCACAGT
CCTGAGGTTGGTAGCCCTACGAGTCTCGCTCGCTCTGTCTCTGCTTCCGTCTGCGCCATCAAGC
CCAGTGACCCCAATAGCATTGGATCTCCAGCTGTGGAGGCGACAAAGGCTTCAGCTGAATTCCA
GACAAACTCTAAGAAAACAGACCCTCCTCTGCAGGTCCTCCCTGATCTCGCTTCCTCGGCAGAA
CGGAGTCTGGCTATGCCTTTGCATAATTCATCAGACGAAGCATTTGTTACAGGTAATTTGGAGA
AATCTGCTGAAAAAAGAACCCAGGGCCTCAGAGTTTATCTCCACACAAGACAGGACGCTAGTTT
ATCTCTCACAACTACTGGGACGCATGAGCCACAGATATTTGTGGAGGAAAAGAGTTGGCATCCA
GAAAATCAGAACTCAAGTCAAGTGAACGGCCTTCAGCAGCACAGAGAAACAGAGCGTGTGCAGC
GTGAGCCTGGAGCGCAGAGCGTTCCAGGTGACCGGGAGTGTCTCTGTCACACAGAAGACCTTGA
GCTTCAGGAAGAAGCTGTCGGTTGGGAAGCTGTGATGAAAGGCAGTGGGGCACTACTGAGCACC
GCTCATCTTCTCAGTGCAGAGGAAGGTCTTCCAGCTCCAGGGCGCTGTAGCTGCTCCTGCTCAG
AAGCCCTGATGGAGGTGGATACAGCTGAACAGTCTCCAGTCGCTAGCTGCAACTCCACAGGCAG
GCCCGTCATCACGAGCCCAGGTGTGTCACATGTCACTTCAGAGCATCCCTCTATGGAAGTAGAA
ACGTCACAGTGTAACCTCTCCTGTGACCGCGTGGAACATTCCATCTTGACTCGGGATTTGCAGC
TCCCAGATAATGTTGAAATGTCTACAATGGATAACAAAGATGACCGCTCCTCTTCCCCTCTCAG
TGGCCATGGTCAGCCCTCTCTGGAGTCAGCAGAAGAATTTTGTTCATCTGTCACAGTGGCCTTG
AAAGAACTACATGAGCTTTTGGTCATTAGCTGTAAGCCAGCTTCAGAAGATTCACCTGAGGACA
TCACCTGTCAGTCAGAAATAGCAGCTGAGAGCCAAGCAAGCATTTCAGACCTTACAGGCAGGAG
TACCCAAAGCGAGCATCTGACCCCTAGTGACCAGCACCCACAAGTCTCCTGTCCCCAGGCCACC
TCTGAGTCAGAAAAGACAGAAATCTTAGGAGCTGCACCCCATGCTGCGGGAGAAGATGATACAT
CCACTGGCTTTGGAGGTCTAGGTGATGGCTTGTCACCTGGCCAAGAAGGCCTCCCCAGATCAAC
AGAGTCAGTCAGGAAGAGCTGTTCTGTTGCCATAACCTCGGCTAAACTGTCTGAGCAGTTGCCC
TGCACCTCAGGTGTGGAGAGCTCACTGGAGCTTGCAGCAGGTGAGGAGGGGGCCCACAGTCAGC
CTTCTGAGCATGTGCAGAATCCAGGCCCAGACAGGCCCGAGACCAGCACTGTCTGCCCCGGAGC
TGTGTTGCCCTTCGGTGGATTGGACCAACCTACCACACAGTCCTTGTCCACTCCCTCTACTCTT
CCACCCTTTGTCTTTCCTGCTGCAGATGTGGACAGGATTCTTGGTGCCGGCTTCACTCTGCAGG
AAGCTCTCGGGGCTTTGCATCGAGTTGGTGGGAACGCAGACCTTGCACTTCTTGTTTTGTTAGC
AAAGAACATTGTAGTCCCTACATAATTGTGGGAAAGTGGGCTAGGCCACGTCTCATTCCTTTTG
AAAAAGCCCTTTTCACACAAATATGCTCAATACACATTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCATACACACACAATATGTGTAGAAAATCTGCAAGCAAAATGTTGAGCCAGATTTTTTTTC
CGGCCAAAGTAATTTATGATCTTTTGTCTGATGAATTTGTCTATCCTACTTGTTAAATTTTGGG
CCTTTTAATTGTATTGGCAGTGTGTGCATACAAAAGCTTTTTATTCTCATTAAGATGATGTATT
CTGGAATAAAGCGGATGGTTTTGTGTATAGCACACCATTTTAGAATGAGTGAATGCTTTGAAAG
CAGGAGTCATGAGGAGCCTGCCTGCCACCTATGGAGCTAGGACAGATGAGCTGCCGTGTGGCTC
TGGCTGTGCTGCGTGCAGGTATGGGCTGTTAACAGGAAGCTGGAGAAGAGAACTTTAGAGTTGG
ATGTTTTAAGGAGAAGGTAATAACTTCCAGAGTTGTATGTTTTGATTTGTGTGCTCAGGGTTGA
CATTTAAATAGGGTGAGTGGGAGGGCTTAAACCTTGGGCTGTCTTGTGCATCATAGGCTGCTGC
ATGGACTGATTGCCAAATACTTTCATGACCATGGGTAGTGTGTGGGGAAATTCACATGAGAGTG
AAACATGGTGCTACTTGTATTTAAAAAGGGAAGGGGAAACCGTGGTCGTAATTCCATTTGTAAG
TGTCAAGGACTGTGAGTTAAAGATAATGGCTTAGACAAACATGGGCGTGTACTAGAGACAGGGT
TGAGGTATCTCACACCCTCGTTCGCTGGTAGTGATCGGGGTTTGACCACCAGGAACCTGCTGGC
TGTGTAAACTCATCTGCTAAGACGTTGTTCCCGTGTTCAGTCGAGCCATGTGAGACAGCACTGG
AGAACCTTTGTCCCTGTCCTCTCAGTGCATGGACCGAGAGTCCGTGAGTGTCCCTCGTGGCAGT
GGAAAAACAATGGAAGTTCTGACAACAGTGGCCTTGGTACAGTCTTCATCCCTTTCTTTCCTCA
GGAGTTTCTTTTCTCAGCAGGATCCATGTTTGTGTTCATCGAGCTGAGCTGGAGTGGGGCAGAA
TGTGTAGCTGTGTATTGTGGCCTTTTTAGTGTCAGCTCTCGCCTTGCAAGTCGCTGTCCCATGG
GCCCCACTGTGCAATAATCACTCCAGATAGGTTTTCGAGCATCCTCTCCTGGAACAGTAACTGT
TGTCTGAGGTGTCTGACAGGAATCCGGAATCTTGCTCTTCTTGAAAAGGATTTTGAGGATAATT
CCTGGTTCTGGAATGAGAGTTTGCAGTCATTAAAATGAAAGTGTTGAAATTGAATTCTGAACTG
ATTCTGTCTAAAAGTCACTATCCCACCACCACCACCCTCTCTCAAAGCTTTTTTTTTTTTTTTT
AAATCCATCAAAATTGAAGTCCTCGAGCACAGACGGGTTCATGTCTCAGGAGTTTTGGAGCATT
GGGGGCACTGACAGGGGTCTCTGTTCTTTGGTCTGTTCTTTTTGCTGCATTGTTTGTGTGCCGA
GGCACTTCAGTGACATGGTGGCAAGTCACACCAAGCATCATGATCCTTTCTGGAATTAGGACAT
GGTTGCCGGATGGCCTTGTGGCTTCCTGCTCTCTCCATCGGGCCCTCAGAACATCAGGCTAGCC
GAGCTATCTTTGAGAAAAGCTTTGTCAGATGAGCACGGCATGTCCGCCTTTTGCCTGTTCTACA
CCAAAGATGTATGTGTGATTCACTAGGAAAGTGCTCCCAGGATTCTGTCACCTGACTCAGAGCA
GAGCCTGAGGCAGAGGCAGAAGCAGGCAGTGCGTTGACGCCTGGCATTGGCTTGAGGTGGGGAG
GGGGTGAATTTTAGAGTCAAAAATCTTTGGGGTTACAGGGTGGGGTGGACAGAAGGAAGTACTG
ATGACAGACTCCTCCCAGAAGGCAGAAGAGATCGGCATGCAAAGTCGGTGTGGCCACTGACTCC
GCCACGGACGCTTGCTGGGGAGCAGCCCTAGCTGGATTATAGAATCCAGTCTGGAAAAGTTTTC
TTTACAATAGCCTTTACATATGTACTTGTCTAAAAATAACCATTTTAGAAGCAGTTTGATGGGC
CAATGATTGTACAGGCGTTCCTAGGAATCCTTTGAATGAGCTTGATGCACTTGCCAAATCCTTT
GTTCCTTTGGTGGTTTTCTTTGCAACAGATAGTTGCTTTTGATTCTTAAGATCTGTCAAATGTA
AGCAAAATCGAAGGCCAGGCACGCTGACACACCTTTCACTCTAGGAGTGTTCACTAATGAACTC
TGAGTTCATTAGTGAGACCCTGTCTTTTCAAAAGGAGATTTAAAAAAAAAAATCTTTCGTCTGA
AGTTTGTATAAAGTTAGGAATTTGTTATTAATTGATTGGCTTAAACTGAGCGAGAGGACAGAGG
ACATTGTGGACAACATCACATTAGTGGCACTTCAGAGTCAGCTTTCACTTAGTCACTCTACCAA
GAGTACAATGACATCATTGTGAAACCTAGTGCTGAGCCAGCCAGATGACACCTGTAACTAACGG
CAAGGGCAGCTCCTGGTCCAGACCCTTGTCAGGTGTTCCGTGGTGGCTGCTTACCTCCTGCAGC
GGTCTCCATTCACGCACCGAAGGGCTTTCTTGTAAAACTGAAGACACAAGCTGAAGGGCGGGAG
AGAGGGCCCTTTGATTCTGGGAAGGGCCATTTCAGGACGTGCTGGCCGCCCTCTGCAGCGGCCG
AAGCCTTCCTCTGGCGGGCTGAGCTCCAGATGCTGACGGGTGAAGGCAGGAGTAGGTGCCTGGC
AAAGGAAGCTTTAGTGGATGGTTAGTGGTGTGTGAGAACCTCTGCCTCTGGTCATCTCTAGACG
CAGGAAAGGGGAGAGACAGCCCTGGGTGTCTACCCAAAACATCCTGGCAAGATGATGCCTAGGA
ATAGGTAGGGGACCTGGTGTCGTGGATTTTGACTGGCTTGCATAGCATCTGCCTGTTAGTCCCT
CTCTACAGCTTTCTATCTCTAGCGGAAGCCATAAGAATTTGTTTCAACTTTTCAGCTCATGTCT
ATAAATAAATACTAAGCTATCTCAAATCTAAGGTGATTGATAAATACTTTACATAGGTTGAAAA
GCAGCTCTTGTGTCTACAGATACCTGCACGCCTGGTGGCTTTTCTTCCTACTCTGTACATAGTA
AACTGCCTTGGACAGGGCAGTACACGAGCGTCTAGGCAAGTTTCCTTTTCTGTCTTGTGTTTTC
TTTGAGACAGGATCTCGCCATAACCCAGGATGGCCTCAAGCTCATGGCGGTTTCTCTGCCTCGG
CCTTTAGGATGCTAGGATCGCAGGTGCACATAGCAATGCCCAGTTCACTCAGCGCATTCCAGTG
GCTACCTGTGGTGGGCATAAACAATGTGGCCGACTGGCTGGTGTATCACTAGCAGCCCATAGGG
CCGAGGGGTGCGGCTTGGTGGAACTCCTGGGGAGCATGTGAGGTCCTAGGTTTGATCCTTACCA
CCGGAAAAAGTAAAAGTCAGTCTTGGGATTTAATAAAGTCCGAGGCTGACTAGAACCCTGTAAT
TTCCCTCTCTCAGTAGTTAACATAACAGCATTTGGTGTTTCCTACATCCCCTCTGAATTACCTG
ACTCCCAGAGTGTCTGTAGAGCCGCAGTAAGGACTTTGGGGTGAGCCTTTGATGTACTTGCTTT
TCTTTCGTGCCTTAATTTTTTTGAATAGCAGAAGCATCACATCTTGGGAGTATCGGGGAAAGGT
TAGAGGGCAGCCCTCCTGGAGAGGACTGACTGCCACTAGATGTGGTCCTTGGCTCCTTACCACT
TTGATTCACCCTTGCCTGCTTCAAACATTAGGTTTTCCCGGGTAGGAGTTTCTGCATCCTGTAT
ACCAAAAAATGGTTTCTAGTGTTTCTTGTTTTCTGTTGCACCTTTTGTGCTGTGATAGGGAGAG
ACCAAATCTTACTCCTCCCATCAAAGCTATGCAGCATGAGCAAGGGTTCATCAGTGTTCATCAA
GCATGGACTGTAGCTCAGCAGCAGCCAAACCAGACAGGAGCCTGGGCTTCGAAGCCTTCGGGGA
GATACGGGGCAGTTTTGAACTAAGATCTGTTTTTCCTATTAGCATGCTATTCCACCCCCGCCCC
GGCATGCTTTTGTTTTTGAGGAGACTTCTTACAGCCCAAACTGGCCTTGAACTAGCAATCCTAA
AGTAGCTGGGTTCACGAAGTCGTAGGCACACTCTGTAATATCCAGGTAGCATGCTTTCATTTTT
AAACTTTGTTATATGGTTGCAGGTTAGAGCCCACTGGGAGGGGGAGAAAACAAGCCCATGATGG
AATTCAACGCTGTAAACCTAGAGTTGTACTCTAAAGTGCTTAGTTTTAGTGTTGTTTTAAACAA
TTGGGGGCTGGTGTGGTGCCACACACCTTTAAGCTGTAAGTGCAAGGCCAGTCAGGGCTACAGA
GAGGAACCGTCTTAAATCAAAAAAATGAATAAAAACAGTTGAGGGTGTAGGGCAATAGCACGGT
GGTAGGCAGAATGCTTGCCTAGCTGCAGGAAGTCCTCAGCCCAGCCCCCAGCACTGCATAAGCC
ACGTGCGGGGTGCCGGTAATTCCCAGCACTGGAGACAGGAGAGAGAAGCAGAAGTTCAAGGTCA
TTCTTGACTGCGTGGGTTACATGAAACCCTGTCACTTAAGAGTGGGTAAAGGGTCAACTGTAGC
TCAGTGGTAGAGCACTTGCCTGACATGTACAAGGCCCTGGGTTTGACTCCCAACACTGCACAGA
AAGGATTTTTTTTTAAAAGATTAGTAGAAATAACTGAAGATGCTGAGGAGTTGGTGTATAAAGC
TGTGGACAGGAAGGCACAGGCAGGAGAGGTGTCCCGTGAAGGAACTGGGGGGATAGCTGTTTCC
CTTCAGGACGCAGGGTCCCATGCAGCACTTAAGATAGGCGAGTGTAACCCCGCCAACCCCCAGG
GAGCAGAACTCAGCCGAGGCCTCTGCAGGATGTGCAGTGTGGACAAGAGAATCCGGAGCAGAAG
TGACCGGGTGTTGGGATGGGCAGACAGGATTGCTCTGCCAGCTCCACAAGACTTCAACCCTCCA
TTTAGGATAGCGGGTGTGTGCACCCCTGAAGCATAGCTTTCCGGTTAGGAAATATGCTTAAAAG
TTGTTCAGTAATTAAACGTGAGGGTTGGGGGTTTGTGAAATGGGGGAGGGAGGCTGGGTGAGTT
TTAGGACACCATCTGGGTCAAACTTACCAAGAAAACGATGGATCAGCATAGGAGTTTCTTTACC
TGCAAAGTGTGGACCACAGACCGGAAGGCATCGAGCATGAGATCAGACGGCTTCTTACTGTGAT
TAAGCAGCCGAAGGAGGTTTTGATTGGGTGACTTGGGTGAGGGGCGTGTCCCCTTTGCCCTGTC
AGGTGATGGGCAGGGTTTGGTTGCCTGAAACCTGCAAACTTGAATGAGTGTGTCTGTGACCTGC
AGAACAGACCTGTGTCCCTACAGGAGCCAGCCAGATGTGTGTTCACGGGCTCCCTGAGCAGTCC
TTATAACCCGGAAGACATGTGGCCTCACACTCTTCCACCCGACTAGCGAGGCTTGTGCTCTCTC
CCTGTATCCCCCGGGCGTGCGTTCACTCTGGTGAGACATCAGAGGGAATCTGTTGCGTTGGGTG
AATCTCCTCTACATGTACTTTCCTTGGGAAACTATTAGTGCATTTGTATCCAGATCTCTCCATG
GCAACCTGGACCCGATGGCTTCAACCCCCAGCAAAGGTTCCCTGGTTTTCTAGCCACAGTTGAC
AGATTGTAACTAGGAAGCCCTCTTTGGCTTCCTGCAGTTGCCTGAGTGTCATGAGGTTTTCTGG
CTTCTCCTTAAGCTTTGACACTACGTCTTTTGAGATCTAGTCTGGTTAGCAAAATCTGCATGCG
AGTGGCCCACCCAGCCATGCCCAGATGCTTTGAGAGTTGGGAAAACTGAGAACTGATAAGCTGC
ACTCAGGAATCCCAAGGTCAGTCGCTGTGTGTGCTAACTGGTTAGGACTGTCTGCAGCTGAACG
CACTAGATGCCTTTGAGTTTGATTTTTTTGTTTTTTGTTTTTTTGTTTTTGTTTTTTTTTTTTG
TCATATTTTGAAATGTAAGTCAGCCCTGAATAATCCAAACACTTTATTTTATTTTTCTTCTTTA
ATAGGAACTTTCTGAAGAAAACGTGATGTGTAAAACCTTTGATATTTAAGACAATAAAGTTTTT
ATCATAAGA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001382515	(Get FASTA)	NCBI Sequence Viewer
	XP_006239367	(Get FASTA)	NCBI Sequence Viewer
	XP_006239368	(Get FASTA)	NCBI Sequence Viewer
	XP_006239370	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH97361	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000016352
	ENSRNOP00000016352.8
	ENSRNOP00000077256
	ENSRNOP00000077256.1
	ENSRNOP00000087348
	ENSRNOP00000087348.1
	ENSRNOP00000111109.1

RefSeq Acc Id:	XP_006239367 ⟸ XM_006239305
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5Y0Y2 (UniProtKB/TrEMBL), A0A8I6GFW9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLLTVYCVRRDLSEVTFSLQVDADFELHNFRALCELESGIPAAESQIVYAERPLTDNHRSLASY GLKDGDVVILRQKENADPRPSVQFSNLPRIDFSSIAVPGTSNPQQRQLPRTQAQLLSPGERTST PQGLDSPALLRDMLLANPHELSLLKERNPPLAEALLSGDLEKFSRVLVEQQQDRARREQERIRL FSADPFDLEAQAKIEEDIRQQNIEENMTIAMEEAPESFGQVAMLYINCRVNGHPVKAFVDSGAQ MTIMSQACAERCNIMRLVDRRWAGIAKGVGTQKIIGRVHLAQVQIEGDFLACSFSILEEQPMDM LLGLDMLKRHQCSIDLKKNVLVIGTTGSQTTFLPEGELPECARLAYGTGREDIRPEEIADQELA EAIQKSAEDAEKSSKESTSLGTPSLLTSEGLNHPAPSGHSPEVGSPTSLARSVSASVCAIKPSD PNSIGSPAVEATKASAEFQTNSKKTDPPLQVLPDLASSAERSLAMPLHNSSDEAFVTGNLEKSA EKRTQGLRVYLHTRQDASLSLTTTGTHEPQIFVEEKSWHPENQNSSQVNGLQQHRETERVQREP GAQSVPGDRECLCHTEDLELQEEAVGWEAVMKGSGALLSTAHLLSAEEGLPAPGRCSCSCSEAL MEVDTAEQSPVASCNSTGRPVITSPGVSHVTSEHPSMEVETSQCNLSCDRVEHSILTRDLQLPD NVEMSTMDNKDDRSSSPLSGHGQPSLESAEEFCSSVTVALKELHELLVISCKPASEDSPEDITC QSEIAAESQASISDLTGRSTQSEHLTPSDQHPQVSCPQATSESEKTEILGAAPHAAGEDDTSTG FGGLGDGLSPGQEGLPRSTESVRKSCSVAITSAKLSEQLPCTSGVESSLELAAGEEGAHSQPSE HVQNPGPDRPETSTVCPGAVLPFGGLDQPTTQSLSTPSTLPPFVFPAADVDRILGAGFTLQEAL GALHRVGGNADLALLVLLAKNIVVPT hide sequence

RefSeq Acc Id:	XP_006239368 ⟸ XM_006239306
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6GFW9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWLCQGAAVCSIPSSPHTALCCCTMIGSRVSFPIYVSFTSGSAIVYAERPLTDNHRSLASYGLK DGDVVILRQKENADPRPSVQFSNLPRIDFSSIAVPGTSNPQQRQLPRTQAQLLSPGERTSTPQG LDSPALLRDMLLANPHELSLLKERNPPLAEALLSGDLEKFSRVLVEQQQDRARREQERIRLFSA DPFDLEAQAKIEEDIRQQNIEENMTIAMEEAPESFGQVAMLYINCRVNGHPVKAFVDSGAQMTI MSQACAERCNIMRLVDRRWAGIAKGVGTQKIIGRVHLAQVQIEGDFLACSFSILEEQPMDMLLG LDMLKRHQCSIDLKKNVLVIGTTGSQTTFLPEGELPECARLAYGTGREDIRPEEIADQELAEAI QKSAEDAEKSSKESTSLGTPSLLTSEGLNHPAPSGHSPEVGSPTSLARSVSASVCAIKPSDPNS IGSPAVEATKASAEFQTNSKKTDPPLQVLPDLASSAERSLAMPLHNSSDEAFVTGNLEKSAEKR TQGLRVYLHTRQDASLSLTTTGTHEPQIFVEEKSWHPENQNSSQVNGLQQHRETERVQREPGAQ SVPGDRECLCHTEDLELQEEAVGWEAVMKGSGALLSTAHLLSAEEGLPAPGRCSCSCSEALMEV DTAEQSPVASCNSTGRPVITSPGVSHVTSEHPSMEVETSQCNLSCDRVEHSILTRDLQLPDNVE MSTMDNKDDRSSSPLSGHGQPSLESAEEFCSSVTVALKELHELLVISCKPASEDSPEDITCQSE IAAESQASISDLTGRSTQSEHLTPSDQHPQVSCPQATSESEKTEILGAAPHAAGEDDTSTGFGG LGDGLSPGQEGLPRSTESVRKSCSVAITSAKLSEQLPCTSGVESSLELAAGEEGAHSQPSEHVQ NPGPDRPETSTVCPGAVLPFGGLDQPTTQSLSTPSTLPPFVFPAADVDRILGAGFTLQEALGAL HRVGGNADLALLVLLAKNIVVPT hide sequence

RefSeq Acc Id:	XP_006239370 ⟸ XM_006239308
- Peptide Label:	isoform X3
- UniProtKB:	A6ITV4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEKSSKESTSLGTPSLLTSEGLNHPAPSGHSPEVGSPTSLARSVSASVCAIKPSDPNSIGSPAV EATKASAEFQTNSKKTDPPLQVLPDLASSAERSLAMPLHNSSDEAFVTGNLEKSAEKRTQGLRV YLHTRQDASLSLTTTGTHEPQIFVEEKSWHPENQNSSQVNGLQQHRETERVQREPGAQSVPGDR ECLCHTEDLELQEEAVGWEAVMKGSGALLSTAHLLSAEEGLPAPGRCSCSCSEALMEVDTAEQS PVASCNSTGRPVITSPGVSHVTSEHPSMEVETSQCNLSCDRVEHSILTRDLQLPDNVEMSTMDN KDDRSSSPLSGHGQPSLESAEEFCSSVTVALKELHELLVISCKPASEDSPEDITCQSEIAAESQ ASISDLTGRSTQSEHLTPSDQHPQVSCPQATSESEKTEILGAAPHAAGEDDTSTGFGGLGDGLS PGQEGLPRSTESVRKSCSVAITSAKLSEQLPCTSGVESSLELAAGEEGAHSQPSEHVQNPGPDR PETSTVCPGAVLPFGGLDQPTTQSLSTPSTLPPFVFPAADVDRILGAGFTLQEALGALHRVGGN ADLALLVLLAKNIVVPT hide sequence

Ensembl Acc Id:

ENSRNOP00000016352 ⟸ ENSRNOT00000016352

Ensembl Acc Id:

ENSRNOP00000068216 ⟸ ENSRNOT00000076160

Ensembl Acc Id:

ENSRNOP00000077256 ⟸ ENSRNOT00000119479

Ensembl Acc Id:

ENSRNOP00000087348 ⟸ ENSRNOT00000109253

RefSeq Acc Id:	NP_001382515 ⟸ NM_001395586
- UniProtKB:	A0A8J8Y1M0 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000111109 ⟸ ENSRNOT00000125439

Protein Domains

UBA Ubiquitin-like

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A096MJP9-F1-model_v2	AlphaFold	A0A096MJP9	1-986	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694231

Promoter ID:

EPDNEW_R4756

Type:

multiple initiation site

Name:

Ddi2_1

Description:

DNA damage inducible 1 homolog 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	160,282,836 - 160,282,896	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311815	AgrOrtholog
BioCyc Gene	G2FUF-39334	BioCyc
Ensembl Genes	ENSRNOG00000012274	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000016352	ENTREZGENE
	ENSRNOT00000016352.8	UniProtKB/TrEMBL
	ENSRNOT00000109253	ENTREZGENE
	ENSRNOT00000109253.2	UniProtKB/TrEMBL
	ENSRNOT00000119479	ENTREZGENE
	ENSRNOT00000119479.2	UniProtKB/TrEMBL
	ENSRNOT00000125439.1	UniProtKB/TrEMBL
Gene3D-CATH	2.40.70.10	UniProtKB/TrEMBL
	Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7442573	IMAGE-MGC_LOAD
InterPro	Ddi1/2_HDD	UniProtKB/TrEMBL
	DDI1_N	UniProtKB/TrEMBL
	Peptidase_aspartic	UniProtKB/TrEMBL
	Peptidase_aspartic_euk-pred	UniProtKB/TrEMBL
	UBA	UniProtKB/TrEMBL
	Ubiquitin	UniProtKB/TrEMBL
	Ubiquitin-rel_dom	UniProtKB/TrEMBL
MGC_CLONE	MGC:114394	IMAGE-MGC_LOAD
NCBI Gene	313668	ENTREZGENE
PANTHER	DNA DAMAGE-INDUCIBLE 1 HOMOLOG 2	UniProtKB/TrEMBL
	SODIUM-GLUCOSE COTRANSPORTER REGULATORY PROTEIN -RELATED	UniProtKB/TrEMBL
Pfam	Asp_protease	UniProtKB/TrEMBL
	Ddi2_HDD	UniProtKB/TrEMBL
	ubiquitin	UniProtKB/TrEMBL
PhenoGen	Ddi2	PhenoGen
PROSITE	UBA	UniProtKB/TrEMBL
	UBIQUITIN_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000012274	RatGTEx
SMART	UBA	UniProtKB/TrEMBL
Superfamily-SCOP	Pept_Aspartic	UniProtKB/TrEMBL
	SSF54236	UniProtKB/TrEMBL
UniProt	A0A8I5Y0Y2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GFW9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8J8Y1M0	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0M6X4_RAT	UniProtKB/TrEMBL
	A6ITV4	ENTREZGENE, UniProtKB/TrEMBL
	Q4V8J5_RAT	UniProtKB/TrEMBL
UniProt Secondary	F1MAK5	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2025-11-13	Ddi2	DDI proteasomal shuttling factor 2	Ddi2	DNA damage inducible 1 homolog 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2017-03-02	Ddi2	DNA damage inducible 1 homolog 2	Ddi2	DNA-damage inducible protein 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-15	Ddi2	DNA-damage inducible protein 2	RGD1311815	similar to RIKEN cDNA 1700027M01	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1311815	similar to RIKEN cDNA 1700027M01	RGD1311815_predicted	similar to RIKEN cDNA 1700027M01 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1311815_predicted	similar to RIKEN cDNA 1700027M01 (predicted)	LOC313668_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC313668_predicted	similar to RIKEN cDNA 1700027M01 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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