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Gene: Mysm1 (myb-like, SWIRM and MPN domains 1) Rattus norvegicus

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Symbol:

Mysm1

Name:

myb-like, SWIRM and MPN domains 1

RGD ID:

1311787

Description:

Predicted to enable deubiquitinase activity; histone binding activity; and transcription coactivator activity. Predicted to be involved in chromatin remodeling; positive regulation of transcription by RNA polymerase II; and regulation of hemopoiesis. Predicted to act upstream of or within pigmentation; regulation of cell migration; and regulation of hair follicle development. Predicted to be located in nucleus. Predicted to be part of protein-containing complex. Human ortholog(s) of this gene implicated in diabetic retinopathy. Orthologous to human MYSM1 (Myb like, SWIRM and MPN domains 1); PARTICIPATES IN histone modification pathway; INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

deubiquitinase MYSM1; histone H2A deubiquitinase MYSM1; LOC298247; RGD1311787; similar to KIAA1915 protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MYSM1 (Myb like, SWIRM and MPN domains 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Mysm1 (myb-like, SWIRM and MPN domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Mysm1 (Myb like, SWIRM and MPN domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MYSM1 (Myb like, SWIRM and MPN domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MYSM1 (Myb like, SWIRM and MPN domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Mysm1 (Myb like, SWIRM and MPN domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MYSM1 (Myb like, SWIRM and MPN domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MYSM1 (Myb like, SWIRM and MPN domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Mysm1 (Myb like, SWIRM and MPN domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Mysm1 (Myb like, SWIRM and MPN domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Mysm1 (myb-like, SWIRM and MPN domains 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	MYSM1 (Myb like, SWIRM and MPN domains 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	mysm1 (Myb-like, SWIRM and MPN domains 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	mysm1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	mysm1	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	114,877,112 - 114,981,463 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	114,889,269 - 114,942,385 (-)	Ensembl				GRCr8
mRatBN7.2	5	109,761,345 - 109,826,652 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	109,776,286 - 109,819,967 (-)	Ensembl				mRatBN7.2
Rnor_6.0	5	113,902,115 - 113,939,083 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	113,906,803 - 113,939,127 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	117,841,917 - 117,892,263 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	115,249,981 - 115,282,319 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	108,403,783 - 108,440,731 (-)	NCBI		Celera
RGSC_v3.1	5	115,255,206 - 115,362,678 (-)	NCBI
Cytogenetic Map	5	q33	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bone Marrow Failure Syndrome 4 (ISO)

diabetic retinopathy (ISO)

genetic disease (ISO)

lymphopenia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

3,4-methylenedioxymethamphetamine (ISO)

6-propyl-2-thiouracil (EXP)

amitrole (EXP)

benzo[a]pyrene (EXP,ISO)

bis(2-chloroethyl) sulfide (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

diazinon (EXP)

Dibutyl phosphate (ISO)

dichloromethane (ISO)

doxorubicin (ISO)

endosulfan (ISO)

formaldehyde (ISO)

FR900359 (ISO)

fulvestrant (ISO)

gentamycin (EXP)

irinotecan (ISO)

levonorgestrel (ISO)

methimazole (EXP)

methyl methanesulfonate (ISO)

miconazole (ISO)

phenobarbital (ISO)

potassium chromate (ISO)

propiconazole (ISO)

quercetin (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

sulforaphane (ISO)

sunitinib (ISO)

testosterone undecanoate (ISO)

thapsigargin (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

troglitazone (ISO)

tungsten (ISO)

valproic acid (EXP,ISO)

vincristine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

chromatin remodeling (IBA,ISO)

pigmentation (ISO)

positive regulation of transcription by RNA polymerase II (IBA,ISO)

regulation of cell migration (ISO)

regulation of hair follicle development (ISO)

regulation of hemopoiesis (ISO)

Cellular Component

nucleolus (ISO)

nucleoplasm (ISO)

nucleus (ISO)

protein-containing complex (ISO)

Molecular Function

DNA binding (IEA)

histone binding (IBA,ISO)

histone H2A deubiquitinase activity (ISO)

metal-dependent deubiquitinase activity (ISO)

metallopeptidase activity (IEA)

peptidase activity (IEA)

protein binding (ISO)

transcription coactivator activity (IBA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

histone modification pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	H2A-DUBbing the mammalian epigenome: expanding frontiers for histone H2A deubiquitinating enzymes in cell biology and physiology.	Belle JI and Nijnik A, Int J Biochem Cell Biol. 2014 May;50:161-74. doi: 10.1016/j.biocel.2014.03.004. Epub 2014 Mar 16.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Genome-wide association study of diabetic retinopathy in a Taiwanese population.	Huang YC, etal., Ophthalmology. 2011 Apr;118(4):642-8. doi: 10.1016/j.ophtha.2010.07.020. Epub 2011 Feb 18.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	The critical role of histone H2A-deubiquitinase Mysm1 in hematopoiesis and lymphocyte differentiation.	Nijnik A, etal., Blood. 2012 Feb 9;119(6):1370-9. doi: 10.1182/blood-2011-05-352666. Epub 2011 Dec 19.
6.	GOA pipeline	RGD automated data pipeline
7.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
9.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:17707232	PMID:24721909	PMID:25340873	PMID:26220525

Genomics

Comparative Map Data

Mysm1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	114,877,112 - 114,981,463 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	114,889,269 - 114,942,385 (-)	Ensembl				GRCr8
mRatBN7.2	5	109,761,345 - 109,826,652 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	109,776,286 - 109,819,967 (-)	Ensembl				mRatBN7.2
Rnor_6.0	5	113,902,115 - 113,939,083 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	113,906,803 - 113,939,127 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	117,841,917 - 117,892,263 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	115,249,981 - 115,282,319 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	108,403,783 - 108,440,731 (-)	NCBI		Celera
RGSC_v3.1	5	115,255,206 - 115,362,678 (-)	NCBI
Cytogenetic Map	5	q33	NCBI

MYSM1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	58,654,743 - 58,700,062 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	58,643,440 - 58,700,090 (-)	Ensembl			hg38	GRCh38
GRCh37	1	59,120,415 - 59,165,734 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	58,898,178 - 58,938,335 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	1	57,409,098 - 57,449,255 (-)	NCBI		Celera
Cytogenetic Map	1	p32.1	NCBI
HuRef	1	57,230,623 - 57,275,921 (-)	NCBI		HuRef
CHM1_1	1	59,235,741 - 59,281,136 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	58,532,658 - 58,578,032 (-)	NCBI		T2T-CHM13v2.0

Mysm1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	94,830,274 - 94,867,392 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	94,830,277 - 94,867,337 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	94,942,037 - 94,979,155 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	94,942,040 - 94,979,100 (-)	Ensembl			mm10	GRCm38
MGSCv37	4	94,608,732 - 94,645,791 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	94,434,059 - 94,471,118 (-)	NCBI		MGSCv36	mm8
MGSCv36	4	92,679,679 - 92,716,946 (-)	NCBI		MGSCv36	mm8
Celera	4	93,309,750 - 93,362,518 (-)	NCBI		Celera
Cytogenetic Map	4	C5	NCBI
cM Map	4	43.34	NCBI

Mysm1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955464	1,185,174 - 1,220,848 (+)	Ensembl
ChiLan1.0	NW_004955464	1,185,184 - 1,226,709 (+)	NCBI	ChiLan1.0	ChiLan1.0

MYSM1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	168,148,533 - 168,194,103 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	167,300,868 - 167,344,264 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	57,916,267 - 57,961,812 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	59,621,583 - 59,666,843 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	59,626,793 - 59,666,809 (-)	Ensembl			panPan2	panpan1.1

MYSM1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	51,037,222 - 51,079,229 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	51,036,874 - 51,075,259 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	51,101,765 - 51,144,584 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	51,216,170 - 51,259,011 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	51,215,367 - 51,256,838 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	51,166,523 - 51,209,333 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	51,111,717 - 51,154,378 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	51,395,364 - 51,438,208 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Mysm1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	72,270,089 - 72,311,300 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936522	3,104,996 - 3,144,087 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936522	3,105,018 - 3,143,215 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MYSM1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	153,756,182 - 153,795,535 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	6	153,755,209 - 153,798,412 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	141,363,206 - 141,387,318 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MYSM1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	74,284,627 - 74,323,651 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	74,284,665 - 74,323,088 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666033	43,034,948 - 43,078,496 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mysm1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624862	1,615,558 - 1,666,148 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624862	1,615,494 - 1,666,440 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Mysm1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	57,931,378 - 57,963,909 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Mysm1
652 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	11
Count of miRNA genes:	11
Interacting mature miRNAs:	11
Transcripts:	ENSRNOT00000039554
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357396	Bw44	Body weight QTL 44	4.19		body mass (VT:0001259)	body weight (CMO:0000012)	5	73779642	118779642	Rat
1331796	Thshl2	Thyroid stimulating hormone level QTL 2	2.3		blood thyroid-stimulating hormone amount (VT:0005119)	serum thyroid stimulating hormone level (CMO:0001248)	5	102105698	152749382	Rat
2303586	Gluco52	Glucose level QTL 52	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	100826632	145826632	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	44924861	153890773	Rat
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	38207390	136631402	Rat
1298070	Scl18	Serum cholesterol level QTL 18	3.7		blood LDL cholesterol amount (VT:0000181)	calculated plasma low density lipoprotein cholesterol level (CMO:0001245)	5	84630798	129630798	Rat
61452	Ciaa5	CIA Autoantibody QTL 5	3.5		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	5	99905133	172190305	Rat
1331801	Rf33	Renal function QTL 33	4.149		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	48523123	134369373	Rat
2302381	Bw84	Body weight QTL 84	4.47		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	5	73779642	118779642	Rat
1357402	Bw46	Body weight QTL 46	4.47		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	5	73779642	118779642	Rat
1298077	Bp157	Blood pressure QTL 157			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	114474223	121056531	Rat
7411582	Foco3	Food consumption QTL 3	7.5	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	5	92583776	137583776	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	65089051	166764498	Rat
1598859	Cm66	Cardiac mass QTL 66	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	84630798	129630798	Rat
7207486	Bss109	Bone structure and strength QTL 109			femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	5	112142946	157142946	Rat
7207481	Bss106	Bone structure and strength QTL 106	7.9		femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	5	112142946	157142946	Rat
1302790	Scl20	Serum cholesterol level QTL 20	6.4	0.0001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	110770739	155770739	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	51657967	166600247	Rat
1549838	Bss4	Bone structure and strength QTL 4	9.2		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	5	112142946	157142946	Rat
1582212	Livw2	Liver weight QTL 2	3.5	0.0004	liver mass (VT:0003402)	liver weight to body weight ratio (CMO:0000633)	5	104018576	124314782	Rat
7411564	Bw135	Body weight QTL 135		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	92583776	137583776	Rat
8657050	Bw146	Body weight QTL 146	19.84	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	98972960	143972960	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55124766	172190305	Rat
7411601	Foco12	Food consumption QTL 12	19.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	5	92583776	137583776	Rat
2303618	Vencon1	Ventilatory control QTL 1	3.8		respiration trait (VT:0001943)	oxygen consumption (CMO:0002169)	5	100826632	145826632	Rat
2317056	Wbc3	White blood cell count QTL 3	2.51	0.01	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	5	111236572	156236572	Rat
7394708	Emca11	Estrogen-induced mammary cancer QTL 11			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	73176602	118176602	Rat
1598846	Bp293	Blood pressure QTL 293	3.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	84630798	129630798	Rat
7394710	Emca12	Estrogen-induced mammary cancer QTL 12			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	94034903	139034903	Rat
1598847	Cm62	Cardiac mass QTL 62	3.4		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	114131300	159131300	Rat
1358909	Kidm25	Kidney mass QTL 25	1.87		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	5	95062526	133270832	Rat
70189	Mcs5	Mammary carcinoma susceptibility QTL 5	10.51		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	60601597	137492949	Rat
7207488	Bss110	Bone structure and strength QTL 1	8.4		femur strength trait (VT:0010010)	femur stiffness (CMO:0001674)	5	112142946	157142946	Rat
7207491	Bss112	Bone structure and strength QTL 112	7		femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	5	112142946	157142946	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	36460764	136631402	Rat
1354598	Srn6	Serum renin concentration QTL 6	3.8		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	5	74335621	156302135	Rat
1600362	Mcs19	Mammary carcinoma susceptibility QTL 19	2.5		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	82032155	127032155	Rat
1298086	Bp156	Blood pressure QTL 156			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	89369373	134369373	Rat
2306971	Anxrr21	Anxiety related response QTL 21	9.47		fear/anxiety-related behavior trait (VT:1000241)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	5	70969494	136328156	Rat
1298089	Scl14	Serum cholesterol level QTL 14	5.8	0.0004	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	114131300	159131300	Rat
1358895	Bp254	Blood pressure QTL 254	3.6	0.0003	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	5	97492524	133270832	Rat
2312671	Scl64	Serum cholesterol level QTL 64		0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	73779642	118779642	Rat
6903316	Bw113	Body weight QTL 113	2	0.0103	body mass (VT:0001259)	body weight (CMO:0000012)	5	92881678	137881678	Rat
1358889	Bp261	Blood pressure QTL 261	2.86		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	5	95062526	133270832	Rat
1358187	Emca1	Estrogen-induced mammary cancer QTL 1	4.4		mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	5	104262817	153890625	Rat

Markers in Region

RH142050

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	5	114,903,473 - 114,904,451 (+)	Marker Load Pipeline
mRatBN7.2	5	109,787,740 - 109,788,718 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	113,906,812 - 113,907,789	NCBI	Rnor6.0
Rnor_5.0	5	117,853,358 - 117,854,335	UniSTS	Rnor5.0
RGSC_v3.4	5	115,250,106 - 115,251,083	UniSTS	RGSC3.4
Celera	5	108,408,478 - 108,409,455	UniSTS
RH 3.4 Map	5	779.3	UniSTS
Cytogenetic Map	5	q33	UniSTS

Mysm1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	109,793,011 - 109,793,628 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	113,912,083 - 113,912,699	NCBI	Rnor6.0
Rnor_5.0	5	117,858,629 - 117,859,245	UniSTS	Rnor5.0
Celera	5	108,413,749 - 108,414,365	UniSTS
Cytogenetic Map	5	q33	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001428926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428927	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006225400	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763911	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763912	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763913	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763914	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008776003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008776004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008776005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008776006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288580	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288581	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288582	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288583	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473998	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000039554 ⟹ ENSRNOP00000030043

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	114,889,269 - 114,942,385 (-)	Ensembl
mRatBN7.2 Ensembl	5	109,776,286 - 109,819,967 (-)	Ensembl
Rnor_6.0 Ensembl	5	113,906,803 - 113,939,127 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102038 ⟹ ENSRNOP00000089875

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	114,903,065 - 114,935,732 (-)	Ensembl
mRatBN7.2 Ensembl	5	109,785,138 - 109,819,967 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119743 ⟹ ENSRNOP00000097255

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	114,903,050 - 114,942,385 (-)	Ensembl
mRatBN7.2 Ensembl	5	109,776,286 - 109,816,741 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000124137 ⟹ ENSRNOP00000112470

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	114,902,470 - 114,935,328 (-)	Ensembl

RefSeq Acc Id:

XM_006238409 ⟹ XP_006238471

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	114,898,779 - 114,935,695 (-)	NCBI
mRatBN7.2	5	109,783,046 - 109,819,857 (-)	NCBI
Rnor_6.0	5	113,902,115 - 113,938,955 (-)	NCBI
Rnor_5.0	5	117,841,917 - 117,892,263 (-)	NCBI

Sequence:

show sequence

CGCAGAGCGGGGTCCTGCGGGCCGGGCTGTGCTAGGCAAGGGCCGGAGGATGCGGTTGGCCAAG
GGTCCGTGTGGACGGCGTCAGGACCCGGGTTGCTCCTGGCCGGAAGTCGGCCGGGTCCACGGGT
CGGGGCGTGGACCTAGTGCCCTGGGTTGGACTGTTTGTCTCCGCTTCCTGGGTTGCAGTGGACC
TGTTTCACTTCGGATTCCTTCCTGCATTCGCTTTGTCTCAGGCTCCTCAAAGCAACTTGAATCC
TGGCGCCTAGTCTACAGGACCTGACTTCATAGACACTTGGTCCCGTCCCTGCAAGCGACCTTGA
TCTAGTGGTTTGAATCCTGCTTCTCAGGACAAGTTGTTGAAAACTTGCAGAGAGGCAGCTTATC
TTAAAGGATCCAGATTTTAGAGTTGGACAATTCATGTTTGCCTTCTGCATTTGCTCTTCCTGTT
TACTGTCAAGGCATTTGTGGCATTTCCAAGCAAGAATCACATGTCGATCTTACTGTTAAATGAT
GGAAATACAGCATCAGTTTTTCAAGATCACTATCTTGATTCAACATGGAGAAGGGAGAATGGCT
GTCTTCCTTGGACTCTGGATAGCACCATCAGTGACGAAAACAGAGCTGTCATTGAGAAAATGCT
GTTGGAAGAAGAGTATTATTTATCTAATAAATCACTTCCAGGAAAATTCTGGGTTAATCAAAAG
GAAAATGATAAAAAATGCACGAACAGCCTACAGAAAACAGGAAAGATCATGGTACGTTCTCCTG
CAAAACCATCCAGTTATTCAGTAAAGTGGACGATAGAAGAGAAAAAACTGTTTGAACAAGGACT
GGCTAAATTTGGCCGAAGATGGACCAAAATCGCAGCACTAGTTAAAAGTCGCACAGTTTTACAA
GTGAAGAGTTATGCCAGACAATACTTCAGAAATAAGGTAAAGTGGGGTGCGGAGAAAGAAACAC
CAACTTTGAAGAGCAACAGTGATCTTCAGGTTAAAAATAAAGATGAAAGGACAAAGGTGTGGGT
CGCATCAGATCCCAACCTTAATGCTGTAAAAATAGAGAAGTTGTCTGATGATGAAGATGTAGAC
ATCACCGATGAGCTGGATGAGTTGACTTCTCAAACATCACAAAAGAATTATGGCGGCCATCTTA
CTTTAGATGTTCCTAGTAGTAAAATGTATAAGACCAACCAAGGAGAATTATGCCAAGAAGGTTC
ATTAGCTAAATCTGCAGAAGAAAATCTTCAGAATGTGAAGCAAAGTGAAGCAGAAGCATGTTCA
AGCTCAGAAATTATGTCATGGGCTGAAAAACAAAATAATAATGGCAAAAACTCAGTTGAATTAA
ATGAGAAATACAGTAAACTGGTTGAGGAATACACTATGCTAACAGAGGAAACCAAGCACTCACC
TTCTCCAGAGCCCTGTGAGGGTCAGAAGGACCCACGTGGAAATGAACTGCTTTTGCCTCCTTGC
CAAGTGGAGGAGGAAAACCATGAAGGAGAAGAGCTTAAGCCACCGGAACAAGAAGTAGAAATAG
ATAGAAATGTCATTCAAGAAGAAGAAAAGCAAGCAATTCCTGAGTTTTTTGAGGGGCGTCAAAC
TAAAACACCAGAACGCTATTTGAAAATTAGAAACTACATTTTGGATCAGTGGGAAATATGCAAA
CCGAAATACTTAAATAAGACCTCAGTACGTCCTGGCCTGAAGAACTGTGGGGATGTTAATTGTA
TTGGACGGATTCATACATACCTCGAGTTGATAGGAGCAATCAATTTTGGATGTGAGCAGGCCAT
ATACAACAGGCCACAACCAGTTGATAAAGTCCGAGTGACCGACAGAAAAGATGCAGAAGCAGCA
TACCAGCTTGCCTGGCGCCTGCAGTCCATGAGAACAAGGAGACGTAGGGTCCGAGATCCATGGG
GAAACTGGTGTGATGCAAAAGACTTAGAAGGGCAAACATTTGAGCATCTATCTGTGGAGGAGTT
GGCAAGAAGAGAAGAGGAGGAAAAGTGCAAACCTATTAAATTTTCAAAAGCTTCAAAACTTCCC
AAAAGCTCACTTGATCCCTTCCAACTGATACCTTGTCATTTTTTCAGTGGAGAAAAGCAGGAGC
CATTTCAGGTGAAAGTAGCTTCAGAAGCACTTTTAATAATGGATCTGCATGCCCACGTGTCTAT
GGCAGAGGTGATTGGGCTTTTAGGAGGAAGATACTCAGAAGCTGATAAGGTCCTTGAAGTCTGT
GCAGCAGAGCCGTGTAACAGTCTGAGTACAGGACTTCAGTGTGAGATGGACCCTGTCTCACAGA
CACAGGCCTCAGAAACCTTGGCTCTCAGAGGCTGCAGTGTTATTGGGTGGTACCATTCTCATCC
TGCGTTTGATCCTAATCCGTCTTTACGCGATATTGACACACAAGCCAAATACCAGAGTTATTTC
TCCAGAGGAGGAGCAAAGTTCATTGGAATGATTGTTAGTCCATATAATCGAAGTAATCCTTTAC
CATATTCCCAGATTACCTGCTTGGTTATAAGTGAAGAACTTAGCCCTGATGGTACCTATCGTTT
ACCTTACAAATTTGAAGTACAACAGATGTTAGAAGAACCTCAGTGGGAATTAGTGTTTGAGAAG
ACAAGATGGATAATCGAAAAATACAGGCTCTCTCATAGCAGCGTCCCCATGGATAGAATATTTC
GCCGTGATTCTGACCTAACTTGTCTGCAGAAACTTTTGGAGTGTCTAAGGAAAACACTAAGCAA
AGTAGCCAATTGTTTCATCGCTGAGGAATTCTTGACTCAAGTTGAAAATTTGTTCCTTTCCAAT
TACAAAAGCAAGGAAGAAAATGGACTGGCAGAAGAAAACAGTGCAAAGGAATTGTTCATGTAAT
TATTTTAAAGTAAGATGTTCTAATCTTGGCATGCTATTGTAAATAATTGAGATTTTTAAAGCAA
TATAAATTATGTATTTTTTTCTGTTAATCCATAAAACTCTAAACTTTCCCACATAAATAATGTG
TGAAGGAAGAGAGATTGGCTTGTTCTTAGAGTAGTAATCAAGAGTGGTAGGTAGACCCCTGCCT
ATATTAAGCGGCGCAGTGGGCCATGATGGCTTGAGCTCTGGCCAGCTTTACGGTGTGCAGCTTG
ATAAGTAGACTATGGCTAAACTTGGCTTCTTCTCCGAAGGAGTCTGTTTCTTACATTGGCATCT
TATCTCAGACATACTTTCTCCCCACATGTTCCCCACATGAGGGGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGGTGGGGGGAGGGAGATTTGGCTATTTGGGTGTTGCAGCCTAGGTGTGGAACAGGTTAATG
TGGTTGAGAACTACTGACTAATAATCGGACAACATGCTCTGAAGTGCCAGCACTGCAAAGGGGG
AATACCCTTAGAAATGTTCAGACAGGGAGACCAAAAGGAAGAAGGACCAACCTTCAGTCTGCTG
CATCTGCTTCAGTCTTATTGTGAACCACTATACTGTACCATAGTCAGCCTCCTCAGGGATTTAA
ATGTTTAAATGAAAAGTAACCTTTTTTCATGTACAATTCAAATCGTTCATGTACTATTAGTGAA
TATTTCTGCTAGCTGGAGAACTGGTGGTTCCCCTTGTCCACGCCTTCCTATTGGTGACAGTTTT
GTTATATGGAAACTAAATGTGAGCTTAGAGTTTTCTCTTTTGCTGCTGTTGTAGTTACAGCCAC
AGAAGGAGGTAGCCCTGGATGGAGCGGCTGCTGTCTTAGGTGGCCTGAGTCTGATTTGGGCTGT
GTGATTTTTAGAAATGGACTTTGCTTTCTCTAGGCCAAGTTTGTTTTATGCAGCTGAGGCTAAT
CCCACCCTGAGTGTTGCTCTAGCTCTGGTTTATCTGCTGACTTGTTGGGCTACACCTTTGGAAC
TTCACTTTCAGATTGTGTGGGCCCCAAATTAACATGTAGTTTACAAGAAAGCCAGCAGTTTCTC
CATTTCCCTCTGTACATTTAGTACAAACAATGAAACATACTTTGTAAAAGTCCTCTTGAAGTCT
AGAAGTATAAAACTCAGAGCAAATAATCAGGAGTCCTGAGCTCTCACCTAATCTGCTCAGCTCT
GGTACCTGACCTTGCTCCACCCTCAGCTCCCTAAACTCAGCAGCTGAGACCCAATGAGCTAAAT
TCTGTCACTTGGTGTCTCTGCAAGCCCAGAAGGCTACAAAAGTCAGTAGCAGCTTTCCTTCCCT
TCACCTGTCTGCTCACAGGTGCTGGAACAGACCTGAAAGGGATGGTAGTTAACTTTCTTGCTGT
TTTCCAGAATGATGTTGAATTTTAAAAAGTTCTTTCTTAAATTTGGGCTTTACACACACCAATG
GTTAACTGTATTCACTGAGCTATACATTGCAAGAACTCAAGGGATAGCAGTAGTCAGAGTGTAG
GGCCTTGAGAACAGAACTTTTTAAGCAACTATTAAGAAAAAAACAACTATCTTCTGACTATAGA
ATATATTTGTAATTTATCTTATGGAATATTTAAATACAGAGAAATATATGCAAAGTATAGATAT
CTCAAATCTACTGTTGAGAAAATATTTTACATAGGAATTAAATTCTTAACCAGTTTTTAACAGC
GTAAATTCAGAACACTCAGAGTTACCGTTTGTCTGCTTTTGTTTCCTGTCTGTTCTCTGTGCCG
CCCTCTTTTCTCTTGTCCTAGTGTCTACACTTGGGCAGCTGCCGATGGCCGCTCTGCCAACCTT
GGCCTCCTGAGAATAGTTAGAGCCAAGACCCTAAAGAAGCACAAATGAGTCTGGAACTTGAGGG
GGCATATAACACAGAAGCTCCTGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
AAGGCCCATTTCAACAGTGTTTGCAGAAGTGGAGGACCAGAGATGCCCAAGTCTCTTCGTCCTA
AATTCTGTTTTTATTGATGCATACAGCTGTAAAATGAGCTTAAATTTTGTTTCTTATTCTGACA
TGGCTAAGGAAACTTAATAATACTTCTATATTAGACTTACTGTTATCGCGTCTCAGCCTTTTGA
CTAAGATCAAGTGTAGACTTATTGTTCTTCAAAATTAATACTCAAGACAGCCAAATCAGTGAAA
CAAGACCAGTAAGGTGAAGCTCCATGGCTGTCGTTTAACCTTGGCCATTTTTTCCCTGTCCATT
TAAATGGCCTAGAACTCCCACTCTTAGAGTTGGTTTGGCCACATGCTCAACACTCATGAGGTTT
TAGGCACCATGCACTTTTGCTCATTTGGACCCCTTCCTTAGAGAATTTAAAATTATGTTTTATA
ATTGTGTTTTATAACATGACAGTATTCACATTTTAATTAAAATATTCTTTTAATTTAAAAATTG
GGTTATTTTTCCTAATAAAATTAAGTAAAACGTTTGTTACACACCCTTTAAAATTCTGAGTCTA
GATTGTGCCTGTGTTCTGAGAGGGTTGTTGGAGAATGCAGACAGTGTTCTCCCTCCCTTACCAC
CACTCCGTTATTTATTGCCACTCCAGCCAGGGGTACTGCAGCTCCTACTATCACAGGCCTGCAC
ATCTGAACTTCATTCTTTCCCATCCTAGCCAGAACTCAGTATGGCTTAGATCATTCATGGGAGG
TGGGGAGTGCAGCAGCTAGAAATCAGTAGATAGGAATTTTACTTTGGTTCCTACTTTTACAGCC
TGTGTCTCACCTTCCCTTTTCTCTCAAACCCTCATATTCATCCATTCTCACAGCCCATGAGTCT
AAGAGCTTTCTGTCATTTGCTGAAAGTACTTAAGCAGGCCCATTCAGGACATCCCGCAGTTGTT
TATGGTTTAGCATTGGCCCGGGCGTCTCCACAGAATGTTCCTCCTCAGGCTGGGGTAGGTGAGG
TCTGTGACATGCAGACTGTAAGCACATGCAGTCGCTTCATTTCTCAGGACAGAGAAAATGGCAG
CCTTGGCTTTCCAGTGAAAGCCATCTACTGCCCTTAGTCTGCCTTCCCCGGGTGTGTTGCCGAG
TCCTGGCGGAAGGAGCTGGAGAAGCCGATAGAACCTGTATGCGCTCTGCTCTGGCTCTGCTCTG
TTGCTGCCCTTAGTCTGCCTTCCCCAGGTGTGTTGCTGCCCTTAGTCTGCCTTCCCCGGCTGTG
TTGCTGAGTCCTGGCGGAAGGAGCTGGAGAAGCGGATAGAACCTGTATGCGCTCTGCTCTGGCT
CTGCTCTGGTGCCAGCAGAAGGCACCCACACACACTCACAGTTTGCCAGCAGACATCCCATGTG
GGTTTCTTCTCATCAGTAGGGGAAGTGGCCACCCAAATTTCCCTTGTTCTTCTTTACCAGCCAG
GCACTCAGTCTGGTGTCACGTGACGCGGCACAGAGGAAAGCCGCTTCTCAGAAGTCTGAGAAAA
GCACACACATTGTGATGAACATGTACTCTATCAGCATTATCAAACTTAACAAAGAAACTTCATC
TCTAGAACTGCATCTCAAGCTTCCTGTTTGTTAATATGCTCTTATGACAATATATTTTGTAATG
TATCCAGAGAAATCAGAATAGTGTGATATCCTTATTTCCTGACCTTTTCTGAAAAAGTTTTATG
CATGCTTTCATTTCCTATAACTTTGCTTCTGGTATCTCTTTTACCTTATTATTACCCCACCAAA
TCAGAAGGAAATAAAAGCATCCAAGAGGAACTTAAAAGGTTCTAAATGAAACTAAACTTTAAAC
CTGAAATTAATTCACAGCATCCAGGTAACTTATTTTTGTCCTTTGCTGATTCTGTCATATATTC
ATGTGACTTCCTGGGGAAATGCCTGGTTTGTTGTCTCGGAGGATCCTAGTAGCTTTTGAAGAAT
TTGTTAAATACTTTCTCACAGTTCATATTTCCTGTTTTATATAATATCATAAAATTGAGACCTG
AGTGGTGGTGCACACCTTTAATCCCAGAACTCAGAGGCAGAGGCAGGAGGATCTCTACAGTTTG
AGGTTAGCCTGGAACAAGACTGCTTAGTAAGACCCTATCTTAAAAATCAACAAAATGTCTGTTT
CAGCATGAGTTCTAAAATTGTAATTAGATTTTATTTAGCCTGATTTATGTAAATAAGTCTTTTA
TATTGCCTTTAAATGTATAGATTGGAGTTAACTTGCACAGTTGTATTGTATATAAGATATTGCA
TGACCATTAATGAACTTGTTGCTGTTTTCCCACAATGTTAACAGTTTTGTGAATTTTTCACTAT
GCATTTACAGTGTTCTATAACAATGACTTAAAACTATTTTATACATTTAAACATTACGTTATAT
TGTATATATCTACTTAAAGAGTATTGTAAATGTCAGTGTTTATAAAATTATGACTTTCCCCAAA
ATATAAACTCATCTTTCCAAACTAACTTGTGACATATTACAAATACCGATTTTAAGCTTTGACA
TATTATCTTGTAGTGAAAGCTAAGAAGAAACATGCTGTCAAGTAAATGTAAGCAAAATTTGAAA
ATAAATTTGATGTCTTTGTAA

hide sequence

RefSeq Acc Id:

XM_008763911 ⟹ XP_008762133

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	114,898,779 - 114,955,628 (-)	NCBI
mRatBN7.2	5	109,783,046 - 109,826,652 (-)	NCBI
Rnor_6.0	5	113,902,115 - 113,939,082 (-)	NCBI

Sequence:

show sequence

CGCCCCCGACCCGCCGCATCTCGCGGGATCTCACGAGTACGCCTGTGTCAAGTGCAGTCATGGA
AGCTGAGGAGGCGGATGTGGATGTGGAGGGAGATGTGGCGGCGGCAGCACAGCCGGGAAATGAT
GGAAATACAGCATCAGTTTTTCAAGATCACTATCTTGATTCAACATGGAGAAGGGAGAATGGCT
GTCTTCCTTGGACTCTGGATAGCACCATCAGTGACGAAAACAGAGCTGTCATTGAGAAAATGCT
GTTGGAAGAAGAGTATTATTTATCTAATAAATCACTTCCAGGAAAATTCTGGGTTAATCAAAAG
GAAAATGATAAAAAATGCACGAACAGCCTACAGAAAACAGGAAAGATCATGGTACGTTCTCCTG
CAAAACCATCCAGTTATTCAGTAAAGTGGACGATAGAAGAGAAAAAACTGTTTGAACAAGGACT
GGCTAAATTTGGCCGAAGATGGACCAAAATCGCAGCACTAGTTAAAAGTCGCACAGTTTTACAA
GTGAAGAGTTATGCCAGACAATACTTCAGAAATAAGGTAAAGTGGGGTGCGGAGAAAGAAACAC
CAACTTTGAAGAGCAACAGTGATCTTCAGGTTAAAAATAAAGATGAAAGGACAAAGGTGTGGGT
CGCATCAGATCCCAACCTTAATGCTGTAAAAATAGAGAAGTTGTCTGATGATGAAGATGTAGAC
ATCACCGATGAGCTGGATGAGTTGACTTCTCAAACATCACAAAAGAATTATGGCGGCCATCTTA
CTTTAGATGTTCCTAGTAGTAAAATGTATAAGACCAACCAAGGAGAATTATGCCAAGAAGGTTC
ATTAGCTAAATCTGCAGAAGAAAATCTTCAGAATGTGAAGCAAAGTGAAGCAGAAGCATGTTCA
AGCTCAGAAATTATGTCATGGGCTGAAAAACAAAATAATAATGGCAAAAACTCAGTTGAATTAA
ATGAGAAATACAGTAAACTGGTTGAGGAATACACTATGCTAACAGAGGAAACCAAGCACTCACC
TTCTCCAGAGCCCTGTGAGGGTCAGAAGGACCCACGTGGAAATGAACTGCTTTTGCCTCCTTGC
CAAGTGGAGGAGGAAAACCATGAAGGAGAAGAGCTTAAGCCACCGGAACAAGAAGTAGAAATAG
ATAGAAATGTCATTCAAGAAGAAGAAAAGCAAGCAATTCCTGAGTTTTTTGAGGGGCGTCAAAC
TAAAACACCAGAACGCTATTTGAAAATTAGAAACTACATTTTGGATCAGTGGGAAATATGCAAA
CCGAAATACTTAAATAAGACCTCAGTACGTCCTGGCCTGAAGAACTGTGGGGATGTTAATTGTA
TTGGACGGATTCATACATACCTCGAGTTGATAGGAGCAATCAATTTTGGATGTGAGCAGGCCAT
ATACAACAGGCCACAACCAGTTGATAAAGTCCGAGTGACCGACAGAAAAGATGCAGAAGCAGCA
TACCAGCTTGCCTGGCGCCTGCAGTCCATGAGAACAAGGAGACGTAGGGTCCGAGATCCATGGG
GAAACTGGTGTGATGCAAAAGACTTAGAAGGGCAAACATTTGAGCATCTATCTGTGGAGGAGTT
GGCAAGAAGAGAAGAGGAGGAAAAGTGCAAACCTATTAAATTTTCAAAAGCTTCAAAACTTCCC
AAAAGCTCACTTGATCCCTTCCAACTGATACCTTGTCATTTTTTCAGTGGAGAAAAGCAGGAGC
CATTTCAGGTGAAAGTAGCTTCAGAAGCACTTTTAATAATGGATCTGCATGCCCACGTGTCTAT
GGCAGAGGTGATTGGGCTTTTAGGAGGAAGATACTCAGAAGCTGATAAGGTCCTTGAAGTCTGT
GCAGCAGAGCCGTGTAACAGTCTGAGTACAGGACTTCAGTGTGAGATGGACCCTGTCTCACAGA
CACAGGCCTCAGAAACCTTGGCTCTCAGAGGCTGCAGTGTTATTGGGTGGTACCATTCTCATCC
TGCGTTTGATCCTAATCCGTCTTTACGCGATATTGACACACAAGCCAAATACCAGAGTTATTTC
TCCAGAGGAGGAGCAAAGTTCATTGGAATGATTGTTAGTCCATATAATCGAAGTAATCCTTTAC
CATATTCCCAGATTACCTGCTTGGTTATAAGTGAAGAACTTAGCCCTGATGGTACCTATCGTTT
ACCTTACAAATTTGAAGTACAACAGATGTTAGAAGAACCTCAGTGGGAATTAGTGTTTGAGAAG
ACAAGATGGATAATCGAAAAATACAGGCTCTCTCATAGCAGCGTCCCCATGGATAGAATATTTC
GCCGTGATTCTGACCTAACTTGTCTGCAGAAACTTTTGGAGTGTCTAAGGAAAACACTAAGCAA
AGTAGCCAATTGTTTCATCGCTGAGGAATTCTTGACTCAAGTTGAAAATTTGTTCCTTTCCAAT
TACAAAAGCAAGGAAGAAAATGGACTGGCAGAAGAAAACAGTGCAAAGGAATTGTTCATGTAAT
TATTTTAAAGTAAGATGTTCTAATCTTGGCATGCTATTGTAAATAATTGAGATTTTTAAAGCAA
TATAAATTATGTATTTTTTTCTGTTAATCCATAAAACTCTAAACTTTCCCACATAAATAATGTG
TGAAGGAAGAGAGATTGGCTTGTTCTTAGAGTAGTAATCAAGAGTGGTAGGTAGACCCCTGCCT
ATATTAAGCGGCGCAGTGGGCCATGATGGCTTGAGCTCTGGCCAGCTTTACGGTGTGCAGCTTG
ATAAGTAGACTATGGCTAAACTTGGCTTCTTCTCCGAAGGAGTCTGTTTCTTACATTGGCATCT
TATCTCAGACATACTTTCTCCCCACATGTTCCCCACATGAGGGGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGGTGGGGGGAGGGAGATTTGGCTATTTGGGTGTTGCAGCCTAGGTGTGGAACAGGTTAATG
TGGTTGAGAACTACTGACTAATAATCGGACAACATGCTCTGAAGTGCCAGCACTGCAAAGGGGG
AATACCCTTAGAAATGTTCAGACAGGGAGACCAAAAGGAAGAAGGACCAACCTTCAGTCTGCTG
CATCTGCTTCAGTCTTATTGTGAACCACTATACTGTACCATAGTCAGCCTCCTCAGGGATTTAA
ATGTTTAAATGAAAAGTAACCTTTTTTCATGTACAATTCAAATCGTTCATGTACTATTAGTGAA
TATTTCTGCTAGCTGGAGAACTGGTGGTTCCCCTTGTCCACGCCTTCCTATTGGTGACAGTTTT
GTTATATGGAAACTAAATGTGAGCTTAGAGTTTTCTCTTTTGCTGCTGTTGTAGTTACAGCCAC
AGAAGGAGGTAGCCCTGGATGGAGCGGCTGCTGTCTTAGGTGGCCTGAGTCTGATTTGGGCTGT
GTGATTTTTAGAAATGGACTTTGCTTTCTCTAGGCCAAGTTTGTTTTATGCAGCTGAGGCTAAT
CCCACCCTGAGTGTTGCTCTAGCTCTGGTTTATCTGCTGACTTGTTGGGCTACACCTTTGGAAC
TTCACTTTCAGATTGTGTGGGCCCCAAATTAACATGTAGTTTACAAGAAAGCCAGCAGTTTCTC
CATTTCCCTCTGTACATTTAGTACAAACAATGAAACATACTTTGTAAAAGTCCTCTTGAAGTCT
AGAAGTATAAAACTCAGAGCAAATAATCAGGAGTCCTGAGCTCTCACCTAATCTGCTCAGCTCT
GGTACCTGACCTTGCTCCACCCTCAGCTCCCTAAACTCAGCAGCTGAGACCCAATGAGCTAAAT
TCTGTCACTTGGTGTCTCTGCAAGCCCAGAAGGCTACAAAAGTCAGTAGCAGCTTTCCTTCCCT
TCACCTGTCTGCTCACAGGTGCTGGAACAGACCTGAAAGGGATGGTAGTTAACTTTCTTGCTGT
TTTCCAGAATGATGTTGAATTTTAAAAAGTTCTTTCTTAAATTTGGGCTTTACACACACCAATG
GTTAACTGTATTCACTGAGCTATACATTGCAAGAACTCAAGGGATAGCAGTAGTCAGAGTGTAG
GGCCTTGAGAACAGAACTTTTTAAGCAACTATTAAGAAAAAAACAACTATCTTCTGACTATAGA
ATATATTTGTAATTTATCTTATGGAATATTTAAATACAGAGAAATATATGCAAAGTATAGATAT
CTCAAATCTACTGTTGAGAAAATATTTTACATAGGAATTAAATTCTTAACCAGTTTTTAACAGC
GTAAATTCAGAACACTCAGAGTTACCGTTTGTCTGCTTTTGTTTCCTGTCTGTTCTCTGTGCCG
CCCTCTTTTCTCTTGTCCTAGTGTCTACACTTGGGCAGCTGCCGATGGCCGCTCTGCCAACCTT
GGCCTCCTGAGAATAGTTAGAGCCAAGACCCTAAAGAAGCACAAATGAGTCTGGAACTTGAGGG
GGCATATAACACAGAAGCTCCTGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
AAGGCCCATTTCAACAGTGTTTGCAGAAGTGGAGGACCAGAGATGCCCAAGTCTCTTCGTCCTA
AATTCTGTTTTTATTGATGCATACAGCTGTAAAATGAGCTTAAATTTTGTTTCTTATTCTGACA
TGGCTAAGGAAACTTAATAATACTTCTATATTAGACTTACTGTTATCGCGTCTCAGCCTTTTGA
CTAAGATCAAGTGTAGACTTATTGTTCTTCAAAATTAATACTCAAGACAGCCAAATCAGTGAAA
CAAGACCAGTAAGGTGAAGCTCCATGGCTGTCGTTTAACCTTGGCCATTTTTTCCCTGTCCATT
TAAATGGCCTAGAACTCCCACTCTTAGAGTTGGTTTGGCCACATGCTCAACACTCATGAGGTTT
TAGGCACCATGCACTTTTGCTCATTTGGACCCCTTCCTTAGAGAATTTAAAATTATGTTTTATA
ATTGTGTTTTATAACATGACAGTATTCACATTTTAATTAAAATATTCTTTTAATTTAAAAATTG
GGTTATTTTTCCTAATAAAATTAAGTAAAACGTTTGTTACACACCCTTTAAAATTCTGAGTCTA
GATTGTGCCTGTGTTCTGAGAGGGTTGTTGGAGAATGCAGACAGTGTTCTCCCTCCCTTACCAC
CACTCCGTTATTTATTGCCACTCCAGCCAGGGGTACTGCAGCTCCTACTATCACAGGCCTGCAC
ATCTGAACTTCATTCTTTCCCATCCTAGCCAGAACTCAGTATGGCTTAGATCATTCATGGGAGG
TGGGGAGTGCAGCAGCTAGAAATCAGTAGATAGGAATTTTACTTTGGTTCCTACTTTTACAGCC
TGTGTCTCACCTTCCCTTTTCTCTCAAACCCTCATATTCATCCATTCTCACAGCCCATGAGTCT
AAGAGCTTTCTGTCATTTGCTGAAAGTACTTAAGCAGGCCCATTCAGGACATCCCGCAGTTGTT
TATGGTTTAGCATTGGCCCGGGCGTCTCCACAGAATGTTCCTCCTCAGGCTGGGGTAGGTGAGG
TCTGTGACATGCAGACTGTAAGCACATGCAGTCGCTTCATTTCTCAGGACAGAGAAAATGGCAG
CCTTGGCTTTCCAGTGAAAGCCATCTACTGCCCTTAGTCTGCCTTCCCCGGGTGTGTTGCCGAG
TCCTGGCGGAAGGAGCTGGAGAAGCCGATAGAACCTGTATGCGCTCTGCTCTGGCTCTGCTCTG
TTGCTGCCCTTAGTCTGCCTTCCCCAGGTGTGTTGCTGCCCTTAGTCTGCCTTCCCCGGCTGTG
TTGCTGAGTCCTGGCGGAAGGAGCTGGAGAAGCGGATAGAACCTGTATGCGCTCTGCTCTGGCT
CTGCTCTGGTGCCAGCAGAAGGCACCCACACACACTCACAGTTTGCCAGCAGACATCCCATGTG
GGTTTCTTCTCATCAGTAGGGGAAGTGGCCACCCAAATTTCCCTTGTTCTTCTTTACCAGCCAG
GCACTCAGTCTGGTGTCACGTGACGCGGCACAGAGGAAAGCCGCTTCTCAGAAGTCTGAGAAAA
GCACACACATTGTGATGAACATGTACTCTATCAGCATTATCAAACTTAACAAAGAAACTTCATC
TCTAGAACTGCATCTCAAGCTTCCTGTTTGTTAATATGCTCTTATGACAATATATTTTGTAATG
TATCCAGAGAAATCAGAATAGTGTGATATCCTTATTTCCTGACCTTTTCTGAAAAAGTTTTATG
CATGCTTTCATTTCCTATAACTTTGCTTCTGGTATCTCTTTTACCTTATTATTACCCCACCAAA
TCAGAAGGAAATAAAAGCATCCAAGAGGAACTTAAAAGGTTCTAAATGAAACTAAACTTTAAAC
CTGAAATTAATTCACAGCATCCAGGTAACTTATTTTTGTCCTTTGCTGATTCTGTCATATATTC
ATGTGACTTCCTGGGGAAATGCCTGGTTTGTTGTCTCGGAGGATCCTAGTAGCTTTTGAAGAAT
TTGTTAAATACTTTCTCACAGTTCATATTTCCTGTTTTATATAATATCATAAAATTGAGACCTG
AGTGGTGGTGCACACCTTTAATCCCAGAACTCAGAGGCAGAGGCAGGAGGATCTCTACAGTTTG
AGGTTAGCCTGGAACAAGACTGCTTAGTAAGACCCTATCTTAAAAATCAACAAAATGTCTGTTT
CAGCATGAGTTCTAAAATTGTAATTAGATTTTATTTAGCCTGATTTATGTAAATAAGTCTTTTA
TATTGCCTTTAAATGTATAGATTGGAGTTAACTTGCACAGTTGTATTGTATATAAGATATTGCA
TGACCATTAATGAACTTGTTGCTGTTTTCCCACAATGTTAACAGTTTTGTGAATTTTTCACTAT
GCATTTACAGTGTTCTATAACAATGACTTAAAACTATTTTATACATTTAAACATTACGTTATAT
TGTATATATCTACTTAAAGAGTATTGTAAATGTCAGTGTTTATAAAATTATGACTTTCCCCAAA
ATATAAACTCATCTTTCCAAACTAACTTGTGACATATTACAAATACCGATTTTAAGCTTTGACA
TATTATCTTGTAGTGAAAGCTAAGAAGAAACATGCTGTCAAGTAAATGTAAGCAAAATTTGAAA
ATAAATTTGATGTCTTTGTAA

hide sequence

RefSeq Acc Id:

XM_008763912 ⟹ XP_008762134

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	114,898,779 - 114,942,385 (-)	NCBI
mRatBN7.2	5	109,783,046 - 109,826,652 (-)	NCBI
Rnor_6.0	5	113,902,115 - 113,939,083 (-)	NCBI

Sequence:

show sequence

CCGCCCCCGACCCGCCGCATCTCGCGGGATCTCACGAGTACGCCTGTGTCAAGTGCAGTCATGG
AAGCTGAGGAGGCGGATGTGGATGTGGAGGGAGATGTGGCGGCGGCAGCACAGCCGGGAAATGA
TGGAAATACAGCATCAGTTTTTCAAGATCACTATCTTGATTCAACATGGAGAAGGGAGAATGGC
TGTCTTCCTTGGACTCTGGATAGCACCATCAGTGACGAAAACAGAGCTGTCATTGAGAAAATGC
TGTTGGAAGAAGAGTATTATTTATCTAATAAATCACTTCCAGGAAAATTCTGGGTTAATCAAAA
GGAAAATGATAAAAAATGCACGAACAGCCTACAGAAAACAGGAAAGATCATGGTACGTTCTCCT
GCAAAACCATCCAGTTATTCAGTAAAGTGGACGATAGAAGAGAAAAAACTGTTTGAACAAGGAC
TGGCTAAATTTGGCCGAAGATGGACCAAAATCGCAGCACTAGTTAAAAGTCGCACAGTTTTACA
AGTGAAGAGTTATGCCAGACAATACTTCAGAAATAAGGTAAAGTGGGGTGCGGAGAAAGAAACA
CCAACTTTGAAGAGCAACAGTGATCTTCAGGTTAAAAATAAAGATGAAAGGACAAAGGTGTGGG
TCGCATCAGATCCCAACCTTAATGCTGTAAAAATAGAGAAGTTGTCTGATGATGAAGATGTAGA
CATCACCGATGAGCTGGATGAGTTGACTTCTCAAACATCACAAAAGAATTATGGCGGCCATCTT
ACTTTAGATGTTCCTAGTAGTAAAATGTATAAGACCAACCAAGGAGAATTATGCCAAGAAGGTT
CATTAGCTAAATCTGCAGAAGAAAATCTTCAGAATGTGAAGCAAAGTGAAGCAGAAGCATGTTC
AAGCTCAGAAATTATGTCATGGGCTGAAAAACAAAATAATAATGGCAAAAACTCAGTTGAATTA
AATGAGAAATACAGTAAACTGGTTGAGGAATACACTATGCTAACAGAGGAAACCAAGCACTCAC
CTTCTCCAGAGCCCTGTGAGGGTCAGAAGGACCCACGTGGAAATGAACTGCTTTTGCCTCCTTG
CCAAGTGGAGGAGGAAAACCATGAAGGAGAAGAGCTTAAGCCACCGGAACAAGAAGTAGAAATA
GATAGAAATGTCATTCAAGAAGAAGAAAAGCAAGCAATTCCTGAGTTTTTTGAGGGGCGTCAAA
CTAAAACACCAGAACGCTATTTGAAAATTAGAAACTACATTTTGGATCAGTGGGAAATATGCAA
ACCGAAATACTTAAATAAGACCTCAGTACGTCCTGGCCTGAAGAACTGTGGGGATGTTAATTGT
ATTGGACGGATTCATACATACCTCGAGTTGATAGGAGCAATCAATTTTGGATGTGAGCAGGCCA
TATACAACAGGCCACAACCAGTTGATAAAGTCCGAGTGACCGACAGAAAAGATGCAGAAGCAGC
ATACCAGCTTGCCTGGCGCCTGCAGTCCATGAGAACAAGGAGACGTAGGGTCCGAGATCCATGG
GGAAACTGGTGTGATGCAAAAGACTTAGAAGGGCAAACATTTGAGCATCTATCTGTGGAGGAGT
TGGCAAGAAGAGAAGAGGAGGAAAAGTGCAAACCTATTAAATTTTCAAAAGCTTCAAAACTTCC
CAAAAGCTCACTTGATCCCTTCCAACTGATACCTTGTCATTTTTTCAGTGGAGAAAAGCAGGAG
CCATTTCAGGTGAAAGTAGCTTCAGAAGCACTTTTAATAATGGATCTGCATGCCCACGTGTCTA
TGGCAGAGGTGATTGGGCTTTTAGGAGGAAGATACTCAGAAGCTGATAAGGTCCTTGAAGTCTG
TGCAGCAGAGCCGTGTAACAGTCTGAGTACAGGACTTCAGTGTGAGATGGACCCTGTCTCACAG
ACACAGGCCTCAGAAACCTTGGCTCTCAGAGGCTGCAGTGTTATTGGGTGGTACCATTCTCATC
CTGCGTTTGATCCTAATCCGTCTTTACGCGATATTGACACACAAGCCAAATACCAGAGTTATTT
CTCCAGAGGAGGAGCAAAGTTCATTGGAATGATTGTTAGTCCATATAATCGAAGTAATCCTTTA
CCATATTCCCAGATTACCTGCTTGGTTATAAGTGAAGAACTTAGCCCTGATGGTACCTATCGTT
TACCTTACAAATTTGAAGTACAACAGATGTTAGAAGAACCTCAGTGGGAATTAGTGTTTGAGAA
GACAAGATGGATAATCGAAAAATACAGGCTCTCTCATAGCGTCCCCATGGATAGAATATTTCGC
CGTGATTCTGACCTAACTTGTCTGCAGAAACTTTTGGAGTGTCTAAGGAAAACACTAAGCAAAG
TAGCCAATTGTTTCATCGCTGAGGAATTCTTGACTCAAGTTGAAAATTTGTTCCTTTCCAATTA
CAAAAGCAAGGAAGAAAATGGACTGGCAGAAGAAAACAGTGCAAAGGAATTGTTCATGTAATTA
TTTTAAAGTAAGATGTTCTAATCTTGGCATGCTATTGTAAATAATTGAGATTTTTAAAGCAATA
TAAATTATGTATTTTTTTCTGTTAATCCATAAAACTCTAAACTTTCCCACATAAATAATGTGTG
AAGGAAGAGAGATTGGCTTGTTCTTAGAGTAGTAATCAAGAGTGGTAGGTAGACCCCTGCCTAT
ATTAAGCGGCGCAGTGGGCCATGATGGCTTGAGCTCTGGCCAGCTTTACGGTGTGCAGCTTGAT
AAGTAGACTATGGCTAAACTTGGCTTCTTCTCCGAAGGAGTCTGTTTCTTACATTGGCATCTTA
TCTCAGACATACTTTCTCCCCACATGTTCCCCACATGAGGGGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGGTGGGGGGAGGGAGATTTGGCTATTTGGGTGTTGCAGCCTAGGTGTGGAACAGGTTAATGTG
GTTGAGAACTACTGACTAATAATCGGACAACATGCTCTGAAGTGCCAGCACTGCAAAGGGGGAA
TACCCTTAGAAATGTTCAGACAGGGAGACCAAAAGGAAGAAGGACCAACCTTCAGTCTGCTGCA
TCTGCTTCAGTCTTATTGTGAACCACTATACTGTACCATAGTCAGCCTCCTCAGGGATTTAAAT
GTTTAAATGAAAAGTAACCTTTTTTCATGTACAATTCAAATCGTTCATGTACTATTAGTGAATA
TTTCTGCTAGCTGGAGAACTGGTGGTTCCCCTTGTCCACGCCTTCCTATTGGTGACAGTTTTGT
TATATGGAAACTAAATGTGAGCTTAGAGTTTTCTCTTTTGCTGCTGTTGTAGTTACAGCCACAG
AAGGAGGTAGCCCTGGATGGAGCGGCTGCTGTCTTAGGTGGCCTGAGTCTGATTTGGGCTGTGT
GATTTTTAGAAATGGACTTTGCTTTCTCTAGGCCAAGTTTGTTTTATGCAGCTGAGGCTAATCC
CACCCTGAGTGTTGCTCTAGCTCTGGTTTATCTGCTGACTTGTTGGGCTACACCTTTGGAACTT
CACTTTCAGATTGTGTGGGCCCCAAATTAACATGTAGTTTACAAGAAAGCCAGCAGTTTCTCCA
TTTCCCTCTGTACATTTAGTACAAACAATGAAACATACTTTGTAAAAGTCCTCTTGAAGTCTAG
AAGTATAAAACTCAGAGCAAATAATCAGGAGTCCTGAGCTCTCACCTAATCTGCTCAGCTCTGG
TACCTGACCTTGCTCCACCCTCAGCTCCCTAAACTCAGCAGCTGAGACCCAATGAGCTAAATTC
TGTCACTTGGTGTCTCTGCAAGCCCAGAAGGCTACAAAAGTCAGTAGCAGCTTTCCTTCCCTTC
ACCTGTCTGCTCACAGGTGCTGGAACAGACCTGAAAGGGATGGTAGTTAACTTTCTTGCTGTTT
TCCAGAATGATGTTGAATTTTAAAAAGTTCTTTCTTAAATTTGGGCTTTACACACACCAATGGT
TAACTGTATTCACTGAGCTATACATTGCAAGAACTCAAGGGATAGCAGTAGTCAGAGTGTAGGG
CCTTGAGAACAGAACTTTTTAAGCAACTATTAAGAAAAAAACAACTATCTTCTGACTATAGAAT
ATATTTGTAATTTATCTTATGGAATATTTAAATACAGAGAAATATATGCAAAGTATAGATATCT
CAAATCTACTGTTGAGAAAATATTTTACATAGGAATTAAATTCTTAACCAGTTTTTAACAGCGT
AAATTCAGAACACTCAGAGTTACCGTTTGTCTGCTTTTGTTTCCTGTCTGTTCTCTGTGCCGCC
CTCTTTTCTCTTGTCCTAGTGTCTACACTTGGGCAGCTGCCGATGGCCGCTCTGCCAACCTTGG
CCTCCTGAGAATAGTTAGAGCCAAGACCCTAAAGAAGCACAAATGAGTCTGGAACTTGAGGGGG
CATATAACACAGAAGCTCCTGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAA
GGCCCATTTCAACAGTGTTTGCAGAAGTGGAGGACCAGAGATGCCCAAGTCTCTTCGTCCTAAA
TTCTGTTTTTATTGATGCATACAGCTGTAAAATGAGCTTAAATTTTGTTTCTTATTCTGACATG
GCTAAGGAAACTTAATAATACTTCTATATTAGACTTACTGTTATCGCGTCTCAGCCTTTTGACT
AAGATCAAGTGTAGACTTATTGTTCTTCAAAATTAATACTCAAGACAGCCAAATCAGTGAAACA
AGACCAGTAAGGTGAAGCTCCATGGCTGTCGTTTAACCTTGGCCATTTTTTCCCTGTCCATTTA
AATGGCCTAGAACTCCCACTCTTAGAGTTGGTTTGGCCACATGCTCAACACTCATGAGGTTTTA
GGCACCATGCACTTTTGCTCATTTGGACCCCTTCCTTAGAGAATTTAAAATTATGTTTTATAAT
TGTGTTTTATAACATGACAGTATTCACATTTTAATTAAAATATTCTTTTAATTTAAAAATTGGG
TTATTTTTCCTAATAAAATTAAGTAAAACGTTTGTTACACACCCTTTAAAATTCTGAGTCTAGA
TTGTGCCTGTGTTCTGAGAGGGTTGTTGGAGAATGCAGACAGTGTTCTCCCTCCCTTACCACCA
CTCCGTTATTTATTGCCACTCCAGCCAGGGGTACTGCAGCTCCTACTATCACAGGCCTGCACAT
CTGAACTTCATTCTTTCCCATCCTAGCCAGAACTCAGTATGGCTTAGATCATTCATGGGAGGTG
GGGAGTGCAGCAGCTAGAAATCAGTAGATAGGAATTTTACTTTGGTTCCTACTTTTACAGCCTG
TGTCTCACCTTCCCTTTTCTCTCAAACCCTCATATTCATCCATTCTCACAGCCCATGAGTCTAA
GAGCTTTCTGTCATTTGCTGAAAGTACTTAAGCAGGCCCATTCAGGACATCCCGCAGTTGTTTA
TGGTTTAGCATTGGCCCGGGCGTCTCCACAGAATGTTCCTCCTCAGGCTGGGGTAGGTGAGGTC
TGTGACATGCAGACTGTAAGCACATGCAGTCGCTTCATTTCTCAGGACAGAGAAAATGGCAGCC
TTGGCTTTCCAGTGAAAGCCATCTACTGCCCTTAGTCTGCCTTCCCCGGGTGTGTTGCCGAGTC
CTGGCGGAAGGAGCTGGAGAAGCCGATAGAACCTGTATGCGCTCTGCTCTGGCTCTGCTCTGTT
GCTGCCCTTAGTCTGCCTTCCCCAGGTGTGTTGCTGCCCTTAGTCTGCCTTCCCCGGCTGTGTT
GCTGAGTCCTGGCGGAAGGAGCTGGAGAAGCGGATAGAACCTGTATGCGCTCTGCTCTGGCTCT
GCTCTGGTGCCAGCAGAAGGCACCCACACACACTCACAGTTTGCCAGCAGACATCCCATGTGGG
TTTCTTCTCATCAGTAGGGGAAGTGGCCACCCAAATTTCCCTTGTTCTTCTTTACCAGCCAGGC
ACTCAGTCTGGTGTCACGTGACGCGGCACAGAGGAAAGCCGCTTCTCAGAAGTCTGAGAAAAGC
ACACACATTGTGATGAACATGTACTCTATCAGCATTATCAAACTTAACAAAGAAACTTCATCTC
TAGAACTGCATCTCAAGCTTCCTGTTTGTTAATATGCTCTTATGACAATATATTTTGTAATGTA
TCCAGAGAAATCAGAATAGTGTGATATCCTTATTTCCTGACCTTTTCTGAAAAAGTTTTATGCA
TGCTTTCATTTCCTATAACTTTGCTTCTGGTATCTCTTTTACCTTATTATTACCCCACCAAATC
AGAAGGAAATAAAAGCATCCAAGAGGAACTTAAAAGGTTCTAAATGAAACTAAACTTTAAACCT
GAAATTAATTCACAGCATCCAGGTAACTTATTTTTGTCCTTTGCTGATTCTGTCATATATTCAT
GTGACTTCCTGGGGAAATGCCTGGTTTGTTGTCTCGGAGGATCCTAGTAGCTTTTGAAGAATTT
GTTAAATACTTTCTCACAGTTCATATTTCCTGTTTTATATAATATCATAAAATTGAGACCTGAG
TGGTGGTGCACACCTTTAATCCCAGAACTCAGAGGCAGAGGCAGGAGGATCTCTACAGTTTGAG
GTTAGCCTGGAACAAGACTGCTTAGTAAGACCCTATCTTAAAAATCAACAAAATGTCTGTTTCA
GCATGAGTTCTAAAATTGTAATTAGATTTTATTTAGCCTGATTTATGTAAATAAGTCTTTTATA
TTGCCTTTAAATGTATAGATTGGAGTTAACTTGCACAGTTGTATTGTATATAAGATATTGCATG
ACCATTAATGAACTTGTTGCTGTTTTCCCACAATGTTAACAGTTTTGTGAATTTTTCACTATGC
ATTTACAGTGTTCTATAACAATGACTTAAAACTATTTTATACATTTAAACATTACGTTATATTG
TATATATCTACTTAAAGAGTATTGTAAATGTCAGTGTTTATAAAATTATGACTTTCCCCAAAAT
ATAAACTCATCTTTCCAAACTAACTTGTGACATATTACAAATACCGATTTTAAGCTTTGACATA
TTATCTTGTAGTGAAAGCTAAGAAGAAACATGCTGTCAAGTAAATGTAAGCAAAATTTGAAAAT
AAATTTGATGTCTTTGTAA

hide sequence

RefSeq Acc Id:

XM_008763913 ⟹ XP_008762135

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	114,898,779 - 114,942,385 (-)	NCBI
mRatBN7.2	5	109,783,046 - 109,826,652 (-)	NCBI
Rnor_6.0	5	113,902,115 - 113,939,083 (-)	NCBI

Sequence:

show sequence

CCGCCCCCGACCCGCCGCATCTCGCGGGATCTCACGAGTACGCCTGTGTCAAGTGCAGTCATGG
AAGCTGAGGAGGCGGATGTGGATGTGGAGGGAGATGTGGCGGCGGCAGCACAGCCGGGAAATGA
TGGAAATACAGCATCAGTTTTTCAAGATCACTATCTTGATTCAACATGGAGAAGGGAGAATGGC
TGTCTTCCTTGGACTCTGGATAGCACCATCAGTGACGAAAACAGAGCTGTCATTGAGAAAATGC
TGTTGGAAGAAGAGTATTATTTATCTAATAAATCACTTCCAGGAAAATTCTGGGTTAATCAAAA
GGAAAATGATAAAAAATGCACGAACAGCCTACAGAAAACAGGAAAGATCATGGTACGTTCTCCT
GCAAAACCATCCAGTTATTCAGTAAAGTGGACGATAGAAGAGAAAAAACTGTTTGAACAAGGAC
TGGCTAAATTTGGCCGAAGATGGACCAAAATCGCAGCACTAGTTAAAAGTCGCACAGTTTTACA
AGTGAAGAGTTATGCCAGACAATACTTCAGAAATAAGGTAAAGTGGGGTGCGGAGAAAGAAACA
CCAACTTTGAAGAGCAACAGTGATCTTCAGGTTAAAAATAAAGATGAAAGGACAAAGGTGTGGG
TCGCATCAGATCCCAACCTTAATGCTGTAAAAATAGAGAAGTTGTCTGATGATGAAGATGTAGA
CATCACCGATGAGCTGGATGAGTTGACTTCTCAAACATCACAAAAGAATTATGGCGGCCATCTT
ACTTTAGATGTTCCTAGTAGTAAAATGTATAAGACCAACCAAGGAGAATTATGCCAAGAAGGTT
CATTAGCTAAATCTGCAGAAGAAAATCTTCAGAATGTGAAGCAAAGTGAAGCAGAAGCATGTTC
AAGCTCAGAAATTATGTCATGGGCTGAAAAACAAAATAATAATGGCAAAAACTCAGTTGAATTA
AATGAGAAATACAGTAAACTGGTTGAGGAATACACTATGCTAACAGAGGAAACCAAGCACTCAC
CTTCTCCAGAGCCCTGTGAGGGTCAGAAGGACCCACGTGGAAATGAACTGCTTTTGCCTCCTTG
CCAAGTGGAGGAGGAAAACCATGAAGGAGAAGAGCTTAAGCCACCGGAACAAGAAGTAGAAATA
GATAGAAATGTCATTCAAGAAGAAGAAAAGCAAGCAATTCCTGAGTTTTTTGAGGGGCGTCAAA
CTAAAACACCAGAACGCTATTTGAAAATTAGAAACTACATTTTGGATCAGTGGGAAATATGCAA
ACCGAAATACTTAAATAAGACCTCAGTACGTCCTGGCCTGAAGAACTGTGGGGATGTTAATTGT
ATTGGACGGATTCATACATACCTCGAGTTGATAGGAGCAATCAATTTTGGATGTGAGCAGGCCA
TATACAACAGGCCACAACCAGTTGATAAAGTCCGAGTGACCGACAGAAAAGATGCAGAAGCAGC
ATACCAGCTTGCCTGGCGCCTGCAGTCCATGAGAACAAGGAGACGTAGGGTCCGAGATCCATGG
GGAAACTGGTGTGATGCAAAAGACTTAGAAGGGCAAACATTTGAGCATCTATCTGTGGAGGAGT
TGGCAAGAAGAGAAGAGGAGGAAAAGTGCAAACCTATTAAATTTTCAAAAGCTTCAAAACTTCC
CAAAAGCTCACTTGATCCCTTCCAACTGATACCTTGTCATTTTTTCAGTGGAGAAAAGCAGGAG
CCATTTCAGGTGAAAGTAGCTTCAGAAGCACTTTTAATAATGGATCTGCATGCCCACGTGTCTA
TGGCAGAGGTGATTGGGCTTTTAGGAGGAAGATACTCAGAAGCTGATAAGGTCCTTGAAGTCTG
TGCAGCAGAGCCGTGTAACAGTCTGAGTACAGGACTTCAGTGTGAGATGGACCCTGTCTCACAG
ACACAGGCCTCAGAAACCTTGGCTCTCAGAGGCTGCAGTGTTATTGGGTGGTACCATTCTCATC
CTGCGTTTGATCCTAATCCGTCTTTACGCGATATTGACACACAAGCCAAATACCAGAGTTATTT
CTCCAGAGGAGGAGCAAAGTTCATTGGAATGATTGTTAGTCCATATAATCGAAGTAATCCTTTA
CCATATTCCCAGATTACCTGCTTGGTTATAAGTGAAGAACTTAGCCCTGATGGTTTACCTTACA
AATTTGAAGTACAACAGATGTTAGAAGAACCTCAGTGGGAATTAGTGTTTGAGAAGACAAGATG
GATAATCGAAAAATACAGGCTCTCTCATAGCAGCGTCCCCATGGATAGAATATTTCGCCGTGAT
TCTGACCTAACTTGTCTGCAGAAACTTTTGGAGTGTCTAAGGAAAACACTAAGCAAAGTAGCCA
ATTGTTTCATCGCTGAGGAATTCTTGACTCAAGTTGAAAATTTGTTCCTTTCCAATTACAAAAG
CAAGGAAGAAAATGGACTGGCAGAAGAAAACAGTGCAAAGGAATTGTTCATGTAATTATTTTAA
AGTAAGATGTTCTAATCTTGGCATGCTATTGTAAATAATTGAGATTTTTAAAGCAATATAAATT
ATGTATTTTTTTCTGTTAATCCATAAAACTCTAAACTTTCCCACATAAATAATGTGTGAAGGAA
GAGAGATTGGCTTGTTCTTAGAGTAGTAATCAAGAGTGGTAGGTAGACCCCTGCCTATATTAAG
CGGCGCAGTGGGCCATGATGGCTTGAGCTCTGGCCAGCTTTACGGTGTGCAGCTTGATAAGTAG
ACTATGGCTAAACTTGGCTTCTTCTCCGAAGGAGTCTGTTTCTTACATTGGCATCTTATCTCAG
ACATACTTTCTCCCCACATGTTCCCCACATGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTGG
GGGGAGGGAGATTTGGCTATTTGGGTGTTGCAGCCTAGGTGTGGAACAGGTTAATGTGGTTGAG
AACTACTGACTAATAATCGGACAACATGCTCTGAAGTGCCAGCACTGCAAAGGGGGAATACCCT
TAGAAATGTTCAGACAGGGAGACCAAAAGGAAGAAGGACCAACCTTCAGTCTGCTGCATCTGCT
TCAGTCTTATTGTGAACCACTATACTGTACCATAGTCAGCCTCCTCAGGGATTTAAATGTTTAA
ATGAAAAGTAACCTTTTTTCATGTACAATTCAAATCGTTCATGTACTATTAGTGAATATTTCTG
CTAGCTGGAGAACTGGTGGTTCCCCTTGTCCACGCCTTCCTATTGGTGACAGTTTTGTTATATG
GAAACTAAATGTGAGCTTAGAGTTTTCTCTTTTGCTGCTGTTGTAGTTACAGCCACAGAAGGAG
GTAGCCCTGGATGGAGCGGCTGCTGTCTTAGGTGGCCTGAGTCTGATTTGGGCTGTGTGATTTT
TAGAAATGGACTTTGCTTTCTCTAGGCCAAGTTTGTTTTATGCAGCTGAGGCTAATCCCACCCT
GAGTGTTGCTCTAGCTCTGGTTTATCTGCTGACTTGTTGGGCTACACCTTTGGAACTTCACTTT
CAGATTGTGTGGGCCCCAAATTAACATGTAGTTTACAAGAAAGCCAGCAGTTTCTCCATTTCCC
TCTGTACATTTAGTACAAACAATGAAACATACTTTGTAAAAGTCCTCTTGAAGTCTAGAAGTAT
AAAACTCAGAGCAAATAATCAGGAGTCCTGAGCTCTCACCTAATCTGCTCAGCTCTGGTACCTG
ACCTTGCTCCACCCTCAGCTCCCTAAACTCAGCAGCTGAGACCCAATGAGCTAAATTCTGTCAC
TTGGTGTCTCTGCAAGCCCAGAAGGCTACAAAAGTCAGTAGCAGCTTTCCTTCCCTTCACCTGT
CTGCTCACAGGTGCTGGAACAGACCTGAAAGGGATGGTAGTTAACTTTCTTGCTGTTTTCCAGA
ATGATGTTGAATTTTAAAAAGTTCTTTCTTAAATTTGGGCTTTACACACACCAATGGTTAACTG
TATTCACTGAGCTATACATTGCAAGAACTCAAGGGATAGCAGTAGTCAGAGTGTAGGGCCTTGA
GAACAGAACTTTTTAAGCAACTATTAAGAAAAAAACAACTATCTTCTGACTATAGAATATATTT
GTAATTTATCTTATGGAATATTTAAATACAGAGAAATATATGCAAAGTATAGATATCTCAAATC
TACTGTTGAGAAAATATTTTACATAGGAATTAAATTCTTAACCAGTTTTTAACAGCGTAAATTC
AGAACACTCAGAGTTACCGTTTGTCTGCTTTTGTTTCCTGTCTGTTCTCTGTGCCGCCCTCTTT
TCTCTTGTCCTAGTGTCTACACTTGGGCAGCTGCCGATGGCCGCTCTGCCAACCTTGGCCTCCT
GAGAATAGTTAGAGCCAAGACCCTAAAGAAGCACAAATGAGTCTGGAACTTGAGGGGGCATATA
ACACAGAAGCTCCTGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGGCCCA
TTTCAACAGTGTTTGCAGAAGTGGAGGACCAGAGATGCCCAAGTCTCTTCGTCCTAAATTCTGT
TTTTATTGATGCATACAGCTGTAAAATGAGCTTAAATTTTGTTTCTTATTCTGACATGGCTAAG
GAAACTTAATAATACTTCTATATTAGACTTACTGTTATCGCGTCTCAGCCTTTTGACTAAGATC
AAGTGTAGACTTATTGTTCTTCAAAATTAATACTCAAGACAGCCAAATCAGTGAAACAAGACCA
GTAAGGTGAAGCTCCATGGCTGTCGTTTAACCTTGGCCATTTTTTCCCTGTCCATTTAAATGGC
CTAGAACTCCCACTCTTAGAGTTGGTTTGGCCACATGCTCAACACTCATGAGGTTTTAGGCACC
ATGCACTTTTGCTCATTTGGACCCCTTCCTTAGAGAATTTAAAATTATGTTTTATAATTGTGTT
TTATAACATGACAGTATTCACATTTTAATTAAAATATTCTTTTAATTTAAAAATTGGGTTATTT
TTCCTAATAAAATTAAGTAAAACGTTTGTTACACACCCTTTAAAATTCTGAGTCTAGATTGTGC
CTGTGTTCTGAGAGGGTTGTTGGAGAATGCAGACAGTGTTCTCCCTCCCTTACCACCACTCCGT
TATTTATTGCCACTCCAGCCAGGGGTACTGCAGCTCCTACTATCACAGGCCTGCACATCTGAAC
TTCATTCTTTCCCATCCTAGCCAGAACTCAGTATGGCTTAGATCATTCATGGGAGGTGGGGAGT
GCAGCAGCTAGAAATCAGTAGATAGGAATTTTACTTTGGTTCCTACTTTTACAGCCTGTGTCTC
ACCTTCCCTTTTCTCTCAAACCCTCATATTCATCCATTCTCACAGCCCATGAGTCTAAGAGCTT
TCTGTCATTTGCTGAAAGTACTTAAGCAGGCCCATTCAGGACATCCCGCAGTTGTTTATGGTTT
AGCATTGGCCCGGGCGTCTCCACAGAATGTTCCTCCTCAGGCTGGGGTAGGTGAGGTCTGTGAC
ATGCAGACTGTAAGCACATGCAGTCGCTTCATTTCTCAGGACAGAGAAAATGGCAGCCTTGGCT
TTCCAGTGAAAGCCATCTACTGCCCTTAGTCTGCCTTCCCCGGGTGTGTTGCCGAGTCCTGGCG
GAAGGAGCTGGAGAAGCCGATAGAACCTGTATGCGCTCTGCTCTGGCTCTGCTCTGTTGCTGCC
CTTAGTCTGCCTTCCCCAGGTGTGTTGCTGCCCTTAGTCTGCCTTCCCCGGCTGTGTTGCTGAG
TCCTGGCGGAAGGAGCTGGAGAAGCGGATAGAACCTGTATGCGCTCTGCTCTGGCTCTGCTCTG
GTGCCAGCAGAAGGCACCCACACACACTCACAGTTTGCCAGCAGACATCCCATGTGGGTTTCTT
CTCATCAGTAGGGGAAGTGGCCACCCAAATTTCCCTTGTTCTTCTTTACCAGCCAGGCACTCAG
TCTGGTGTCACGTGACGCGGCACAGAGGAAAGCCGCTTCTCAGAAGTCTGAGAAAAGCACACAC
ATTGTGATGAACATGTACTCTATCAGCATTATCAAACTTAACAAAGAAACTTCATCTCTAGAAC
TGCATCTCAAGCTTCCTGTTTGTTAATATGCTCTTATGACAATATATTTTGTAATGTATCCAGA
GAAATCAGAATAGTGTGATATCCTTATTTCCTGACCTTTTCTGAAAAAGTTTTATGCATGCTTT
CATTTCCTATAACTTTGCTTCTGGTATCTCTTTTACCTTATTATTACCCCACCAAATCAGAAGG
AAATAAAAGCATCCAAGAGGAACTTAAAAGGTTCTAAATGAAACTAAACTTTAAACCTGAAATT
AATTCACAGCATCCAGGTAACTTATTTTTGTCCTTTGCTGATTCTGTCATATATTCATGTGACT
TCCTGGGGAAATGCCTGGTTTGTTGTCTCGGAGGATCCTAGTAGCTTTTGAAGAATTTGTTAAA
TACTTTCTCACAGTTCATATTTCCTGTTTTATATAATATCATAAAATTGAGACCTGAGTGGTGG
TGCACACCTTTAATCCCAGAACTCAGAGGCAGAGGCAGGAGGATCTCTACAGTTTGAGGTTAGC
CTGGAACAAGACTGCTTAGTAAGACCCTATCTTAAAAATCAACAAAATGTCTGTTTCAGCATGA
GTTCTAAAATTGTAATTAGATTTTATTTAGCCTGATTTATGTAAATAAGTCTTTTATATTGCCT
TTAAATGTATAGATTGGAGTTAACTTGCACAGTTGTATTGTATATAAGATATTGCATGACCATT
AATGAACTTGTTGCTGTTTTCCCACAATGTTAACAGTTTTGTGAATTTTTCACTATGCATTTAC
AGTGTTCTATAACAATGACTTAAAACTATTTTATACATTTAAACATTACGTTATATTGTATATA
TCTACTTAAAGAGTATTGTAAATGTCAGTGTTTATAAAATTATGACTTTCCCCAAAATATAAAC
TCATCTTTCCAAACTAACTTGTGACATATTACAAATACCGATTTTAAGCTTTGACATATTATCT
TGTAGTGAAAGCTAAGAAGAAACATGCTGTCAAGTAAATGTAAGCAAAATTTGAAAATAAATTT
GATGTCTTTGTAA

hide sequence

RefSeq Acc Id:

XM_008763914 ⟹ XP_008762136

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	114,898,779 - 114,942,385 (-)	NCBI
mRatBN7.2	5	109,783,046 - 109,826,652 (-)	NCBI
Rnor_6.0	5	113,902,115 - 113,939,082 (-)	NCBI

Sequence:

show sequence

CGCCCCCGACCCGCCGCATCTCGCGGGATCTCACGAGTACGCCTGTGTCAAGTGCAGTCATGGA
AGCTGAGGAGGCGGATGTGGATGTGGAGGGAGATGTGGCGGCGGCAGCACAGCCGGGAAATGAT
GGAAATACAGCATCAGTTTTTCAAGATCACTATCTTGATTCAACATGGAGAAGGGAGAATGGCT
GTCTTCCTTGGACTCTGGATAGCACCATCAGTGACGAAAACAGAGCTGTCATTGAGAAAATGCT
GTTGGAAGAAGAGTATTATTTATCTAATAAATCACTTCCAGGAAAATTCTGGGTTAATCAAAAG
GAAAATGATAAAAAATGCACGAACAGGGTACGTTCTCCTGCAAAACCATCCAGTTATTCAGTAA
AGTGGACGATAGAAGAGAAAAAACTGTTTGAACAAGGACTGGCTAAATTTGGCCGAAGATGGAC
CAAAATCGCAGCACTAGTTAAAAGTCGCACAGTTTTACAAGTGAAGAGTTATGCCAGACAATAC
TTCAGAAATAAGGTAAAGTGGGGTGCGGAGAAAGAAACACCAACTTTGAAGAGCAACAGTGATC
TTCAGGTTAAAAATAAAGATGAAAGGACAAAGGTGTGGGTCGCATCAGATCCCAACCTTAATGC
TGTAAAAATAGAGAAGTTGTCTGATGATGAAGATGTAGACATCACCGATGAGCTGGATGAGTTG
ACTTCTCAAACATCACAAAAGAATTATGGCGGCCATCTTACTTTAGATGTTCCTAGTAGTAAAA
TGTATAAGACCAACCAAGGAGAATTATGCCAAGAAGGTTCATTAGCTAAATCTGCAGAAGAAAA
TCTTCAGAATGTGAAGCAAAGTGAAGCAGAAGCATGTTCAAGCTCAGAAATTATGTCATGGGCT
GAAAAACAAAATAATAATGGCAAAAACTCAGTTGAATTAAATGAGAAATACAGTAAACTGGTTG
AGGAATACACTATGCTAACAGAGGAAACCAAGCACTCACCTTCTCCAGAGCCCTGTGAGGGTCA
GAAGGACCCACGTGGAAATGAACTGCTTTTGCCTCCTTGCCAAGTGGAGGAGGAAAACCATGAA
GGAGAAGAGCTTAAGCCACCGGAACAAGAAGTAGAAATAGATAGAAATGTCATTCAAGAAGAAG
AAAAGCAAGCAATTCCTGAGTTTTTTGAGGGGCGTCAAACTAAAACACCAGAACGCTATTTGAA
AATTAGAAACTACATTTTGGATCAGTGGGAAATATGCAAACCGAAATACTTAAATAAGACCTCA
GTACGTCCTGGCCTGAAGAACTGTGGGGATGTTAATTGTATTGGACGGATTCATACATACCTCG
AGTTGATAGGAGCAATCAATTTTGGATGTGAGCAGGCCATATACAACAGGCCACAACCAGTTGA
TAAAGTCCGAGTGACCGACAGAAAAGATGCAGAAGCAGCATACCAGCTTGCCTGGCGCCTGCAG
TCCATGAGAACAAGGAGACGTAGGGTCCGAGATCCATGGGGAAACTGGTGTGATGCAAAAGACT
TAGAAGGGCAAACATTTGAGCATCTATCTGTGGAGGAGTTGGCAAGAAGAGAAGAGGAGGAAAA
GTGCAAACCTATTAAATTTTCAAAAGCTTCAAAACTTCCCAAAAGCTCACTTGATCCCTTCCAA
CTGATACCTTGTCATTTTTTCAGTGGAGAAAAGCAGGAGCCATTTCAGGTGAAAGTAGCTTCAG
AAGCACTTTTAATAATGGATCTGCATGCCCACGTGTCTATGGCAGAGGTGATTGGGCTTTTAGG
AGGAAGATACTCAGAAGCTGATAAGGTCCTTGAAGTCTGTGCAGCAGAGCCGTGTAACAGTCTG
AGTACAGGACTTCAGTGTGAGATGGACCCTGTCTCACAGACACAGGCCTCAGAAACCTTGGCTC
TCAGAGGCTGCAGTGTTATTGGGTGGTACCATTCTCATCCTGCGTTTGATCCTAATCCGTCTTT
ACGCGATATTGACACACAAGCCAAATACCAGAGTTATTTCTCCAGAGGAGGAGCAAAGTTCATT
GGAATGATTGTTAGTCCATATAATCGAAGTAATCCTTTACCATATTCCCAGATTACCTGCTTGG
TTATAAGTGAAGAACTTAGCCCTGATGGTACCTATCGTTTACCTTACAAATTTGAAGTACAACA
GATGTTAGAAGAACCTCAGTGGGAATTAGTGTTTGAGAAGACAAGATGGATAATCGAAAAATAC
AGGCTCTCTCATAGCAGCGTCCCCATGGATAGAATATTTCGCCGTGATTCTGACCTAACTTGTC
TGCAGAAACTTTTGGAGTGTCTAAGGAAAACACTAAGCAAAGTAGCCAATTGTTTCATCGCTGA
GGAATTCTTGACTCAAGTTGAAAATTTGTTCCTTTCCAATTACAAAAGCAAGGAAGAAAATGGA
CTGGCAGAAGAAAACAGTGCAAAGGAATTGTTCATGTAATTATTTTAAAGTAAGATGTTCTAAT
CTTGGCATGCTATTGTAAATAATTGAGATTTTTAAAGCAATATAAATTATGTATTTTTTTCTGT
TAATCCATAAAACTCTAAACTTTCCCACATAAATAATGTGTGAAGGAAGAGAGATTGGCTTGTT
CTTAGAGTAGTAATCAAGAGTGGTAGGTAGACCCCTGCCTATATTAAGCGGCGCAGTGGGCCAT
GATGGCTTGAGCTCTGGCCAGCTTTACGGTGTGCAGCTTGATAAGTAGACTATGGCTAAACTTG
GCTTCTTCTCCGAAGGAGTCTGTTTCTTACATTGGCATCTTATCTCAGACATACTTTCTCCCCA
CATGTTCCCCACATGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTGGGGGGAGGGAGATTTGG
CTATTTGGGTGTTGCAGCCTAGGTGTGGAACAGGTTAATGTGGTTGAGAACTACTGACTAATAA
TCGGACAACATGCTCTGAAGTGCCAGCACTGCAAAGGGGGAATACCCTTAGAAATGTTCAGACA
GGGAGACCAAAAGGAAGAAGGACCAACCTTCAGTCTGCTGCATCTGCTTCAGTCTTATTGTGAA
CCACTATACTGTACCATAGTCAGCCTCCTCAGGGATTTAAATGTTTAAATGAAAAGTAACCTTT
TTTCATGTACAATTCAAATCGTTCATGTACTATTAGTGAATATTTCTGCTAGCTGGAGAACTGG
TGGTTCCCCTTGTCCACGCCTTCCTATTGGTGACAGTTTTGTTATATGGAAACTAAATGTGAGC
TTAGAGTTTTCTCTTTTGCTGCTGTTGTAGTTACAGCCACAGAAGGAGGTAGCCCTGGATGGAG
CGGCTGCTGTCTTAGGTGGCCTGAGTCTGATTTGGGCTGTGTGATTTTTAGAAATGGACTTTGC
TTTCTCTAGGCCAAGTTTGTTTTATGCAGCTGAGGCTAATCCCACCCTGAGTGTTGCTCTAGCT
CTGGTTTATCTGCTGACTTGTTGGGCTACACCTTTGGAACTTCACTTTCAGATTGTGTGGGCCC
CAAATTAACATGTAGTTTACAAGAAAGCCAGCAGTTTCTCCATTTCCCTCTGTACATTTAGTAC
AAACAATGAAACATACTTTGTAAAAGTCCTCTTGAAGTCTAGAAGTATAAAACTCAGAGCAAAT
AATCAGGAGTCCTGAGCTCTCACCTAATCTGCTCAGCTCTGGTACCTGACCTTGCTCCACCCTC
AGCTCCCTAAACTCAGCAGCTGAGACCCAATGAGCTAAATTCTGTCACTTGGTGTCTCTGCAAG
CCCAGAAGGCTACAAAAGTCAGTAGCAGCTTTCCTTCCCTTCACCTGTCTGCTCACAGGTGCTG
GAACAGACCTGAAAGGGATGGTAGTTAACTTTCTTGCTGTTTTCCAGAATGATGTTGAATTTTA
AAAAGTTCTTTCTTAAATTTGGGCTTTACACACACCAATGGTTAACTGTATTCACTGAGCTATA
CATTGCAAGAACTCAAGGGATAGCAGTAGTCAGAGTGTAGGGCCTTGAGAACAGAACTTTTTAA
GCAACTATTAAGAAAAAAACAACTATCTTCTGACTATAGAATATATTTGTAATTTATCTTATGG
AATATTTAAATACAGAGAAATATATGCAAAGTATAGATATCTCAAATCTACTGTTGAGAAAATA
TTTTACATAGGAATTAAATTCTTAACCAGTTTTTAACAGCGTAAATTCAGAACACTCAGAGTTA
CCGTTTGTCTGCTTTTGTTTCCTGTCTGTTCTCTGTGCCGCCCTCTTTTCTCTTGTCCTAGTGT
CTACACTTGGGCAGCTGCCGATGGCCGCTCTGCCAACCTTGGCCTCCTGAGAATAGTTAGAGCC
AAGACCCTAAAGAAGCACAAATGAGTCTGGAACTTGAGGGGGCATATAACACAGAAGCTCCTGA
AAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGGCCCATTTCAACAGTGTTTGC
AGAAGTGGAGGACCAGAGATGCCCAAGTCTCTTCGTCCTAAATTCTGTTTTTATTGATGCATAC
AGCTGTAAAATGAGCTTAAATTTTGTTTCTTATTCTGACATGGCTAAGGAAACTTAATAATACT
TCTATATTAGACTTACTGTTATCGCGTCTCAGCCTTTTGACTAAGATCAAGTGTAGACTTATTG
TTCTTCAAAATTAATACTCAAGACAGCCAAATCAGTGAAACAAGACCAGTAAGGTGAAGCTCCA
TGGCTGTCGTTTAACCTTGGCCATTTTTTCCCTGTCCATTTAAATGGCCTAGAACTCCCACTCT
TAGAGTTGGTTTGGCCACATGCTCAACACTCATGAGGTTTTAGGCACCATGCACTTTTGCTCAT
TTGGACCCCTTCCTTAGAGAATTTAAAATTATGTTTTATAATTGTGTTTTATAACATGACAGTA
TTCACATTTTAATTAAAATATTCTTTTAATTTAAAAATTGGGTTATTTTTCCTAATAAAATTAA
GTAAAACGTTTGTTACACACCCTTTAAAATTCTGAGTCTAGATTGTGCCTGTGTTCTGAGAGGG
TTGTTGGAGAATGCAGACAGTGTTCTCCCTCCCTTACCACCACTCCGTTATTTATTGCCACTCC
AGCCAGGGGTACTGCAGCTCCTACTATCACAGGCCTGCACATCTGAACTTCATTCTTTCCCATC
CTAGCCAGAACTCAGTATGGCTTAGATCATTCATGGGAGGTGGGGAGTGCAGCAGCTAGAAATC
AGTAGATAGGAATTTTACTTTGGTTCCTACTTTTACAGCCTGTGTCTCACCTTCCCTTTTCTCT
CAAACCCTCATATTCATCCATTCTCACAGCCCATGAGTCTAAGAGCTTTCTGTCATTTGCTGAA
AGTACTTAAGCAGGCCCATTCAGGACATCCCGCAGTTGTTTATGGTTTAGCATTGGCCCGGGCG
TCTCCACAGAATGTTCCTCCTCAGGCTGGGGTAGGTGAGGTCTGTGACATGCAGACTGTAAGCA
CATGCAGTCGCTTCATTTCTCAGGACAGAGAAAATGGCAGCCTTGGCTTTCCAGTGAAAGCCAT
CTACTGCCCTTAGTCTGCCTTCCCCGGGTGTGTTGCCGAGTCCTGGCGGAAGGAGCTGGAGAAG
CCGATAGAACCTGTATGCGCTCTGCTCTGGCTCTGCTCTGTTGCTGCCCTTAGTCTGCCTTCCC
CAGGTGTGTTGCTGCCCTTAGTCTGCCTTCCCCGGCTGTGTTGCTGAGTCCTGGCGGAAGGAGC
TGGAGAAGCGGATAGAACCTGTATGCGCTCTGCTCTGGCTCTGCTCTGGTGCCAGCAGAAGGCA
CCCACACACACTCACAGTTTGCCAGCAGACATCCCATGTGGGTTTCTTCTCATCAGTAGGGGAA
GTGGCCACCCAAATTTCCCTTGTTCTTCTTTACCAGCCAGGCACTCAGTCTGGTGTCACGTGAC
GCGGCACAGAGGAAAGCCGCTTCTCAGAAGTCTGAGAAAAGCACACACATTGTGATGAACATGT
ACTCTATCAGCATTATCAAACTTAACAAAGAAACTTCATCTCTAGAACTGCATCTCAAGCTTCC
TGTTTGTTAATATGCTCTTATGACAATATATTTTGTAATGTATCCAGAGAAATCAGAATAGTGT
GATATCCTTATTTCCTGACCTTTTCTGAAAAAGTTTTATGCATGCTTTCATTTCCTATAACTTT
GCTTCTGGTATCTCTTTTACCTTATTATTACCCCACCAAATCAGAAGGAAATAAAAGCATCCAA
GAGGAACTTAAAAGGTTCTAAATGAAACTAAACTTTAAACCTGAAATTAATTCACAGCATCCAG
GTAACTTATTTTTGTCCTTTGCTGATTCTGTCATATATTCATGTGACTTCCTGGGGAAATGCCT
GGTTTGTTGTCTCGGAGGATCCTAGTAGCTTTTGAAGAATTTGTTAAATACTTTCTCACAGTTC
ATATTTCCTGTTTTATATAATATCATAAAATTGAGACCTGAGTGGTGGTGCACACCTTTAATCC
CAGAACTCAGAGGCAGAGGCAGGAGGATCTCTACAGTTTGAGGTTAGCCTGGAACAAGACTGCT
TAGTAAGACCCTATCTTAAAAATCAACAAAATGTCTGTTTCAGCATGAGTTCTAAAATTGTAAT
TAGATTTTATTTAGCCTGATTTATGTAAATAAGTCTTTTATATTGCCTTTAAATGTATAGATTG
GAGTTAACTTGCACAGTTGTATTGTATATAAGATATTGCATGACCATTAATGAACTTGTTGCTG
TTTTCCCACAATGTTAACAGTTTTGTGAATTTTTCACTATGCATTTACAGTGTTCTATAACAAT
GACTTAAAACTATTTTATACATTTAAACATTACGTTATATTGTATATATCTACTTAAAGAGTAT
TGTAAATGTCAGTGTTTATAAAATTATGACTTTCCCCAAAATATAAACTCATCTTTCCAAACTA
ACTTGTGACATATTACAAATACCGATTTTAAGCTTTGACATATTATCTTGTAGTGAAAGCTAAG
AAGAAACATGCTGTCAAGTAAATGTAAGCAAAATTTGAAAATAAATTTGATGTCTTTGTAA

hide sequence

RefSeq Acc Id:

XM_039111107 ⟹ XP_038967035

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	114,877,112 - 114,942,385 (-)	NCBI
mRatBN7.2	5	109,761,345 - 109,826,652 (-)	NCBI

RefSeq Acc Id:

XM_039111109 ⟹ XP_038967037

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	114,898,779 - 114,942,385 (-)	NCBI
mRatBN7.2	5	109,783,046 - 109,826,652 (-)	NCBI

RefSeq Acc Id:

XM_039111110 ⟹ XP_038967038

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	114,898,779 - 114,935,587 (-)	NCBI
mRatBN7.2	5	109,783,046 - 109,819,856 (-)	NCBI

RefSeq Acc Id:

XM_063288579 ⟹ XP_063144649

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	114,898,779 - 114,981,463 (-)	NCBI

RefSeq Acc Id:

XM_063288580 ⟹ XP_063144650

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	114,898,779 - 114,935,805 (-)	NCBI

RefSeq Acc Id:

XM_063288581 ⟹ XP_063144651

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	114,898,779 - 114,942,385 (-)	NCBI

RefSeq Acc Id:

XM_063288582 ⟹ XP_063144652

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	114,898,779 - 114,935,692 (-)	NCBI

RefSeq Acc Id:

XM_063288583 ⟹ XP_063144653

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	114,913,454 - 114,942,385 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001415855	(Get FASTA)	NCBI Sequence Viewer
	NP_001415856	(Get FASTA)	NCBI Sequence Viewer
	XP_006238471	(Get FASTA)	NCBI Sequence Viewer
	XP_008762133	(Get FASTA)	NCBI Sequence Viewer
	XP_008762134	(Get FASTA)	NCBI Sequence Viewer
	XP_008762135	(Get FASTA)	NCBI Sequence Viewer
	XP_008762136	(Get FASTA)	NCBI Sequence Viewer
	XP_038967035	(Get FASTA)	NCBI Sequence Viewer
	XP_038967037	(Get FASTA)	NCBI Sequence Viewer
	XP_038967038	(Get FASTA)	NCBI Sequence Viewer
	XP_063144649	(Get FASTA)	NCBI Sequence Viewer
	XP_063144650	(Get FASTA)	NCBI Sequence Viewer
	XP_063144651	(Get FASTA)	NCBI Sequence Viewer
	XP_063144652	(Get FASTA)	NCBI Sequence Viewer
	XP_063144653	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL97763	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000030043
	ENSRNOP00000030043.5
	ENSRNOP00000089875.2
	ENSRNOP00000097255
	ENSRNOP00000097255.2
	ENSRNOP00000112470
	ENSRNOP00000112470.1

RefSeq Acc Id:	XP_006238471 ⟸ XM_006238409
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6B5I6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSILLLNDGNTASVFQDHYLDSTWRRENGCLPWTLDSTISDENRAVIEKMLLEEEYYLSNKSLP GKFWVNQKENDKKCTNSLQKTGKIMVRSPAKPSSYSVKWTIEEKKLFEQGLAKFGRRWTKIAAL VKSRTVLQVKSYARQYFRNKVKWGAEKETPTLKSNSDLQVKNKDERTKVWVASDPNLNAVKIEK LSDDEDVDITDELDELTSQTSQKNYGGHLTLDVPSSKMYKTNQGELCQEGSLAKSAEENLQNVK QSEAEACSSSEIMSWAEKQNNNGKNSVELNEKYSKLVEEYTMLTEETKHSPSPEPCEGQKDPRG NELLLPPCQVEEENHEGEELKPPEQEVEIDRNVIQEEEKQAIPEFFEGRQTKTPERYLKIRNYI LDQWEICKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLELIGAINFGCEQAIYNRPQPVDKVRVT DRKDAEAAYQLAWRLQSMRTRRRRVRDPWGNWCDAKDLEGQTFEHLSVEELARREEEEKCKPIK FSKASKLPKSSLDPFQLIPCHFFSGEKQEPFQVKVASEALLIMDLHAHVSMAEVIGLLGGRYSE ADKVLEVCAAEPCNSLSTGLQCEMDPVSQTQASETLALRGCSVIGWYHSHPAFDPNPSLRDIDT QAKYQSYFSRGGAKFIGMIVSPYNRSNPLPYSQITCLVISEELSPDGTYRLPYKFEVQQMLEEP QWELVFEKTRWIIEKYRLSHSSVPMDRIFRRDSDLTCLQKLLECLRKTLSKVANCFIAEEFLTQ VENLFLSNYKSKEENGLAEENSAKELFM hide sequence

RefSeq Acc Id:	XP_008762134 ⟸ XM_008763912
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6B5I6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAEEADVDVEGDVAAAAQPGNDGNTASVFQDHYLDSTWRRENGCLPWTLDSTISDENRAVIEK MLLEEEYYLSNKSLPGKFWVNQKENDKKCTNSLQKTGKIMVRSPAKPSSYSVKWTIEEKKLFEQ GLAKFGRRWTKIAALVKSRTVLQVKSYARQYFRNKVKWGAEKETPTLKSNSDLQVKNKDERTKV WVASDPNLNAVKIEKLSDDEDVDITDELDELTSQTSQKNYGGHLTLDVPSSKMYKTNQGELCQE GSLAKSAEENLQNVKQSEAEACSSSEIMSWAEKQNNNGKNSVELNEKYSKLVEEYTMLTEETKH SPSPEPCEGQKDPRGNELLLPPCQVEEENHEGEELKPPEQEVEIDRNVIQEEEKQAIPEFFEGR QTKTPERYLKIRNYILDQWEICKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLELIGAINFGCEQ AIYNRPQPVDKVRVTDRKDAEAAYQLAWRLQSMRTRRRRVRDPWGNWCDAKDLEGQTFEHLSVE ELARREEEEKCKPIKFSKASKLPKSSLDPFQLIPCHFFSGEKQEPFQVKVASEALLIMDLHAHV SMAEVIGLLGGRYSEADKVLEVCAAEPCNSLSTGLQCEMDPVSQTQASETLALRGCSVIGWYHS HPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSPYNRSNPLPYSQITCLVISEELSPDGTY RLPYKFEVQQMLEEPQWELVFEKTRWIIEKYRLSHSVPMDRIFRRDSDLTCLQKLLECLRKTLS KVANCFIAEEFLTQVENLFLSNYKSKEENGLAEENSAKELFM hide sequence

RefSeq Acc Id:	XP_008762136 ⟸ XM_008763914
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6A9L8 (UniProtKB/TrEMBL), A0A8I6B5I6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAEEADVDVEGDVAAAAQPGNDGNTASVFQDHYLDSTWRRENGCLPWTLDSTISDENRAVIEK MLLEEEYYLSNKSLPGKFWVNQKENDKKCTNRVRSPAKPSSYSVKWTIEEKKLFEQGLAKFGRR WTKIAALVKSRTVLQVKSYARQYFRNKVKWGAEKETPTLKSNSDLQVKNKDERTKVWVASDPNL NAVKIEKLSDDEDVDITDELDELTSQTSQKNYGGHLTLDVPSSKMYKTNQGELCQEGSLAKSAE ENLQNVKQSEAEACSSSEIMSWAEKQNNNGKNSVELNEKYSKLVEEYTMLTEETKHSPSPEPCE GQKDPRGNELLLPPCQVEEENHEGEELKPPEQEVEIDRNVIQEEEKQAIPEFFEGRQTKTPERY LKIRNYILDQWEICKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLELIGAINFGCEQAIYNRPQP VDKVRVTDRKDAEAAYQLAWRLQSMRTRRRRVRDPWGNWCDAKDLEGQTFEHLSVEELARREEE EKCKPIKFSKASKLPKSSLDPFQLIPCHFFSGEKQEPFQVKVASEALLIMDLHAHVSMAEVIGL LGGRYSEADKVLEVCAAEPCNSLSTGLQCEMDPVSQTQASETLALRGCSVIGWYHSHPAFDPNP SLRDIDTQAKYQSYFSRGGAKFIGMIVSPYNRSNPLPYSQITCLVISEELSPDGTYRLPYKFEV QQMLEEPQWELVFEKTRWIIEKYRLSHSSVPMDRIFRRDSDLTCLQKLLECLRKTLSKVANCFI AEEFLTQVENLFLSNYKSKEENGLAEENSAKELFM hide sequence

RefSeq Acc Id:	XP_008762133 ⟸ XM_008763911
- Peptide Label:	isoform X1
- UniProtKB:	D4A7T9 (UniProtKB/TrEMBL), A0A8I6B5I6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAEEADVDVEGDVAAAAQPGNDGNTASVFQDHYLDSTWRRENGCLPWTLDSTISDENRAVIEK MLLEEEYYLSNKSLPGKFWVNQKENDKKCTNSLQKTGKIMVRSPAKPSSYSVKWTIEEKKLFEQ GLAKFGRRWTKIAALVKSRTVLQVKSYARQYFRNKVKWGAEKETPTLKSNSDLQVKNKDERTKV WVASDPNLNAVKIEKLSDDEDVDITDELDELTSQTSQKNYGGHLTLDVPSSKMYKTNQGELCQE GSLAKSAEENLQNVKQSEAEACSSSEIMSWAEKQNNNGKNSVELNEKYSKLVEEYTMLTEETKH SPSPEPCEGQKDPRGNELLLPPCQVEEENHEGEELKPPEQEVEIDRNVIQEEEKQAIPEFFEGR QTKTPERYLKIRNYILDQWEICKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLELIGAINFGCEQ AIYNRPQPVDKVRVTDRKDAEAAYQLAWRLQSMRTRRRRVRDPWGNWCDAKDLEGQTFEHLSVE ELARREEEEKCKPIKFSKASKLPKSSLDPFQLIPCHFFSGEKQEPFQVKVASEALLIMDLHAHV SMAEVIGLLGGRYSEADKVLEVCAAEPCNSLSTGLQCEMDPVSQTQASETLALRGCSVIGWYHS HPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSPYNRSNPLPYSQITCLVISEELSPDGTY RLPYKFEVQQMLEEPQWELVFEKTRWIIEKYRLSHSSVPMDRIFRRDSDLTCLQKLLECLRKTL SKVANCFIAEEFLTQVENLFLSNYKSKEENGLAEENSAKELFM hide sequence

RefSeq Acc Id:	XP_008762135 ⟸ XM_008763913
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6B5I6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAEEADVDVEGDVAAAAQPGNDGNTASVFQDHYLDSTWRRENGCLPWTLDSTISDENRAVIEK MLLEEEYYLSNKSLPGKFWVNQKENDKKCTNSLQKTGKIMVRSPAKPSSYSVKWTIEEKKLFEQ GLAKFGRRWTKIAALVKSRTVLQVKSYARQYFRNKVKWGAEKETPTLKSNSDLQVKNKDERTKV WVASDPNLNAVKIEKLSDDEDVDITDELDELTSQTSQKNYGGHLTLDVPSSKMYKTNQGELCQE GSLAKSAEENLQNVKQSEAEACSSSEIMSWAEKQNNNGKNSVELNEKYSKLVEEYTMLTEETKH SPSPEPCEGQKDPRGNELLLPPCQVEEENHEGEELKPPEQEVEIDRNVIQEEEKQAIPEFFEGR QTKTPERYLKIRNYILDQWEICKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLELIGAINFGCEQ AIYNRPQPVDKVRVTDRKDAEAAYQLAWRLQSMRTRRRRVRDPWGNWCDAKDLEGQTFEHLSVE ELARREEEEKCKPIKFSKASKLPKSSLDPFQLIPCHFFSGEKQEPFQVKVASEALLIMDLHAHV SMAEVIGLLGGRYSEADKVLEVCAAEPCNSLSTGLQCEMDPVSQTQASETLALRGCSVIGWYHS HPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSPYNRSNPLPYSQITCLVISEELSPDGLP YKFEVQQMLEEPQWELVFEKTRWIIEKYRLSHSSVPMDRIFRRDSDLTCLQKLLECLRKTLSKV ANCFIAEEFLTQVENLFLSNYKSKEENGLAEENSAKELFM hide sequence

Ensembl Acc Id:

ENSRNOP00000030043 ⟸ ENSRNOT00000039554

RefSeq Acc Id:	XP_038967035 ⟸ XM_039111107
- Peptide Label:	isoform X1
- UniProtKB:	D4A7T9 (UniProtKB/TrEMBL), A0A8I6B5I6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967037 ⟸ XM_039111109
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6B5I6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967038 ⟸ XM_039111110
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I6B5I6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000097255 ⟸ ENSRNOT00000119743

Ensembl Acc Id:

ENSRNOP00000089875 ⟸ ENSRNOT00000102038

RefSeq Acc Id:	XP_063144649 ⟸ XM_063288579
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6B5I6 (UniProtKB/TrEMBL), D4A7T9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144651 ⟸ XM_063288581
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6B5I6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144650 ⟸ XM_063288580
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063144652 ⟸ XM_063288582
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I6B5I6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144653 ⟸ XM_063288583
- Peptide Label:	isoform X10

Ensembl Acc Id:

ENSRNOP00000112470 ⟸ ENSRNOT00000124137

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A7T9-F1-model_v2	AlphaFold	D4A7T9	1-811	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693848

Promoter ID:

EPDNEW_R4368

Type:

multiple initiation site

Name:

Mysm1_1

Description:

myb-like, SWIRM and MPN domains 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	113,939,038 - 113,939,098	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311787	AgrOrtholog
BioCyc Gene	G2FUF-40699	BioCyc
Ensembl Genes	ENSRNOG00000026299	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000039554	ENTREZGENE
	ENSRNOT00000039554.8	UniProtKB/TrEMBL
	ENSRNOT00000102038.2	UniProtKB/TrEMBL
	ENSRNOT00000119743	ENTREZGENE
	ENSRNOT00000119743.2	UniProtKB/TrEMBL
	ENSRNOT00000124137	ENTREZGENE
	ENSRNOT00000124137.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.10.10	UniProtKB/TrEMBL
	Cytidine Deaminase, domain 2	UniProtKB/TrEMBL
	Homeodomain-like	UniProtKB/TrEMBL
InterPro	Homeodomain-like	UniProtKB/TrEMBL
	JAB_dom_prok	UniProtKB/TrEMBL
	JAMM_MPN+_peptidase_M67A	UniProtKB/TrEMBL
	Mov34_MPN_PAD1	UniProtKB/TrEMBL
	MPN	UniProtKB/TrEMBL
	Myb_dom	UniProtKB/TrEMBL
	SANT_DNA-bd	UniProtKB/TrEMBL
	SANT_eukarya	UniProtKB/TrEMBL
	SWIRM	UniProtKB/TrEMBL
	WH-like_DNA-bd_sf	UniProtKB/TrEMBL
NCBI Gene	298247	ENTREZGENE
PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED	UniProtKB/TrEMBL
Pfam	Mov34	UniProtKB/TrEMBL
	Myb_DNA-binding	UniProtKB/TrEMBL
	Prok-JAB	UniProtKB/TrEMBL
	SWIRM	UniProtKB/TrEMBL
PhenoGen	Mysm1	PhenoGen
PROSITE	HTH_MYB	UniProtKB/TrEMBL
	MPN	UniProtKB/TrEMBL
	MYB_LIKE	UniProtKB/TrEMBL
	SANT	UniProtKB/TrEMBL
	SWIRM	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000026299	RatGTEx
SMART	JAB_MPN	UniProtKB/TrEMBL
	SANT	UniProtKB/TrEMBL
Superfamily-SCOP	Homeodomain_like	UniProtKB/TrEMBL
	JAB1/MPN domain	UniProtKB/TrEMBL
UniProt	A0A8I6A9L8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6B5I6	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0MAV2_RAT	UniProtKB/TrEMBL
	D4A7T9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Mysm1	myb-like, SWIRM and MPN domains 1	Mysm1_predicted	myb-like, SWIRM and MPN domains 1 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Mysm1_predicted	myb-like, SWIRM and MPN domains 1 (predicted)	RGD1311787_predicted	similar to KIAA1915 protein (predicted)	Symbol and Name updated	1299863	APPROVED
2005-01-20	RGD1311787_predicted	similar to KIAA1915 protein (predicted)	LOC298247_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC298247_predicted	similar to KIAA1915 protein (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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