Rgp1 (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 5 | 62,630,253 - 62,638,872 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 5 | 62,630,133 - 62,638,864 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 5 | 57,834,467 - 57,843,087 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 57,834,629 - 57,843,086 (+) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 5 | 59,814,307 - 59,822,927 (+) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 61,633,123 - 61,641,743 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 61,604,593 - 61,613,213 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 59,080,290 - 59,088,777 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 59,080,765 - 59,088,523 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 63,604,879 - 63,613,371 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 5 | 60,057,647 - 60,061,853 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 5 | 56,415,170 - 56,423,657 (+) | NCBI | | Celera | | | RGSC_v3.1 | 5 | 60,057,331 - 60,063,791 (+) | NCBI | | | | | Cytogenetic Map | 5 | q22 | NCBI | | | | |
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RGP1 (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 9 | 35,749,287 - 35,790,428 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 9 | 35,748,613 - 35,758,600 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 9 | 35,749,284 - 35,758,582 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 9 | 35,739,203 - 35,742,871 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Celera | 9 | 35,682,828 - 35,686,815 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | p13.3 | NCBI | | | | | HuRef | 9 | 35,704,897 - 35,708,883 (+) | NCBI | | HuRef | | | CHM1_1 | 9 | 35,749,681 - 35,753,668 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 9 | 35,769,968 - 35,779,266 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Rgp1 (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 4 | 43,578,735 - 43,587,487 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 43,578,715 - 43,587,487 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 4 | 43,578,735 - 43,587,487 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 43,578,715 - 43,587,487 (+) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 4 | 43,591,607 - 43,600,359 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 43,600,029 - 43,608,587 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 43,612,724 - 43,621,477 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | A5 | NCBI | | | | | cM Map | 4 | 23.05 | NCBI | | | | |
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Rgp1 (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955472 | 550,198 - 554,038 (-) | Ensembl | | | | | ChiLan1.0 | NW_004955472 | 550,198 - 554,038 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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RGP1 (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 11 | 88,804,618 - 88,839,274 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 9 | 88,810,556 - 88,845,035 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 9 | 35,600,213 - 35,641,371 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 9 | 36,402,999 - 36,411,625 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 9 | 36,403,447 - 36,411,420 (+) | Ensembl | | | panPan2 | panpan1.1 |
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RGP1 (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 11 | 52,276,151 - 52,280,482 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 11 | 52,277,189 - 52,281,639 (+) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 11 | 50,843,619 - 50,853,283 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 11 | 53,340,989 - 53,350,395 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 11 | 53,341,692 - 53,350,658 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 11 | 51,885,532 - 51,895,196 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 11 | 51,869,058 - 51,878,720 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 11 | 52,571,203 - 52,580,867 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Rgp1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024404947 | 167,194,778 - 167,203,354 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936524 | 3,742,596 - 3,750,742 (+) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936524 | 3,742,590 - 3,746,371 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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RGP1 (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 1 | 236,468,320 - 236,477,683 (+) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 236,468,115 - 236,478,347 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 264,193,418 - 264,197,794 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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RGP1 (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 12 | 44,843,368 - 44,851,896 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 12 | 44,848,379 - 44,851,942 (-) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666038 | 41,948,022 - 41,956,690 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Rgp1 (Heterocephalus glaber - naked mole-rat) |
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Rgp1 (Rattus rattus - black rat) |
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