Smtnl1 (smoothelin-like 1) - Rat Genome Database

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Gene: Smtnl1 (smoothelin-like 1) Rattus norvegicus
Analyze
Symbol: Smtnl1
Name: smoothelin-like 1
RGD ID: 1311701
Description: Predicted to enable several functions, including calmodulin binding activity; protein domain specific binding activity; and protein phosphatase 1 binding activity. Predicted to be involved in negative regulation of DNA-templated transcription. Predicted to act upstream of or within several processes, including blood vessel diameter maintenance; muscle organ morphogenesis; and response to activity. Predicted to be located in I band; M band; and nucleus. Orthologous to human SMTNL1 (smoothelin like 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; alpha-Zearalanol; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC311167; RGD1311701; similar to RIKEN cDNA 1110030K22; smoothelin-like protein 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8390,295,682 - 90,307,769 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl390,295,682 - 90,307,752 (-)EnsemblGRCr8
mRatBN7.2369,889,010 - 69,901,096 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl369,889,010 - 69,901,079 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx373,270,699 - 73,278,699 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0381,869,366 - 81,877,366 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0379,628,355 - 79,636,353 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0372,207,150 - 72,219,209 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl372,207,113 - 72,219,246 (-)Ensemblrn6Rnor6.0
Rnor_5.0378,728,182 - 78,740,150 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4368,017,296 - 68,025,299 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera369,248,302 - 69,252,187 (-)NCBICelera
RGSC_v3.1367,913,666 - 67,921,671 (-)NCBI
Cytogenetic Map3q24NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
contractile muscle fiber  (IEA,ISO)
cytoplasm  (IEA,ISO)
I band  (IEA,ISO)
M band  (IEA,ISO)
nucleus  (IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:18310078   PMID:18477568   PMID:20634291   PMID:21771785   PMID:22424482   PMID:25923522  


Genomics

Comparative Map Data
Smtnl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8390,295,682 - 90,307,769 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl390,295,682 - 90,307,752 (-)EnsemblGRCr8
mRatBN7.2369,889,010 - 69,901,096 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl369,889,010 - 69,901,079 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx373,270,699 - 73,278,699 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0381,869,366 - 81,877,366 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0379,628,355 - 79,636,353 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0372,207,150 - 72,219,209 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl372,207,113 - 72,219,246 (-)Ensemblrn6Rnor6.0
Rnor_5.0378,728,182 - 78,740,150 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4368,017,296 - 68,025,299 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera369,248,302 - 69,252,187 (-)NCBICelera
RGSC_v3.1367,913,666 - 67,921,671 (-)NCBI
Cytogenetic Map3q24NCBI
SMTNL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381157,537,595 - 57,550,272 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1157,537,595 - 57,550,272 (+)Ensemblhg38GRCh38
GRCh371157,305,068 - 57,317,745 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361157,065,555 - 57,074,684 (+)NCBIBuild 36Build 36hg18NCBI36
Celera1154,666,633 - 54,674,266 (+)NCBICelera
Cytogenetic Map11q12.1NCBI
HuRef1153,658,903 - 53,666,539 (+)NCBIHuRef
CHM1_11157,176,354 - 57,183,988 (+)NCBICHM1_1
T2T-CHM13v2.01157,487,765 - 57,500,440 (+)NCBIT2T-CHM13v2.0
Smtnl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39284,641,494 - 84,657,173 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl284,641,520 - 84,652,996 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38284,811,173 - 84,826,847 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl284,811,176 - 84,822,652 (-)Ensemblmm10GRCm38
MGSCv37284,651,333 - 84,662,809 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36284,612,015 - 84,623,491 (-)NCBIMGSCv36mm8
Celera286,406,709 - 86,421,097 (-)NCBICelera
Cytogenetic Map2DNCBI
cM Map249.45NCBI
Smtnl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555112,515,651 - 2,521,077 (+)Ensembl
ChiLan1.0NW_0049555112,512,950 - 2,521,200 (+)NCBIChiLan1.0ChiLan1.0
SMTNL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2958,692,926 - 58,706,659 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11159,713,177 - 59,725,017 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01152,777,777 - 52,792,165 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11156,250,161 - 56,262,842 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1156,255,219 - 56,262,685 (+)EnsemblpanPan2panpan1.1
SMTNL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11838,620,810 - 38,632,580 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1838,621,066 - 38,628,762 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1838,166,926 - 38,178,671 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01839,302,779 - 39,314,560 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1839,303,092 - 39,314,489 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11838,885,372 - 38,897,148 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01838,459,013 - 38,470,701 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01839,089,411 - 39,101,187 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Smtnl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494714,841,247 - 14,851,914 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365814,955,071 - 4,965,785 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365814,955,072 - 4,965,760 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SMTNL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1213,370,920 - 13,384,843 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
SMTNL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1115,682,270 - 15,697,126 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl115,679,502 - 15,696,462 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666038113,036,406 - 113,044,258 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Smtnl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248643,114,210 - 3,121,831 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Smtnl1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1562,191,664 - 62,199,504 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Smtnl1
112 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:88
Count of miRNA genes:75
Interacting mature miRNAs:80
Transcripts:ENSRNOT00000009903
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300178Hrtrt4Heart rate QTL 43.74heart pumping trait (VT:2000009)heart rate (CMO:0000002)351490129111359995Rat
61377Edpm3Estrogen-dependent pituitary mass QTL 37.050.038pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)373592611110333156Rat
1358293Bw38Body weight QTL 3860.0000031body mass (VT:0001259)body weight (CMO:0000012)374364268119364268Rat
1582238Bw68Body weight QTL 683.20.0064body mass (VT:0001259)body weight (CMO:0000012)373592512136118980Rat
1582239Epfw1Epididymal fat weight QTL 14.50.0006epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)373592512136118980Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
1354589Bw31Body weight QTL 313.3body mass (VT:0001259)body weight (CMO:0000012)35365182698651826Rat
2303593Gluco46Glucose level QTL 463blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)34887661993876619Rat
1354590Despr11Despair related QTL 110.000031locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)34887661993876619Rat
2298542Neuinf11Neuroinflammation QTL 113.9nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)33540319997383526Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)367641776167835660Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)358601291153936591Rat
631832Sach1Saccharin preference QTL 12.70.02consumption behavior trait (VT:0002069)calculated saccharin drink intake volume (CMO:0001600)34790417292904172Rat
737818Hcar12Hepatocarcinoma resistance QTL 122.6liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)349872657138829559Rat
1582218Bw74Body weight QTL 743.90.0021body mass (VT:0001259)body weight (CMO:0000012)373592512136118980Rat
1582221Kidm30Kidney mass QTL 303.50.0008kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)385062224136118980Rat
631647Bp122Blood pressure QTL 1226.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)35109256196092561Rat
1582210Bw71Body weight QTL 713.30.0012body mass (VT:0001259)body weight (CMO:0000012)385062224136118980Rat
9590286Uminl1Urine mineral level QTL 13.50.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)34865774493657744Rat
1300111Rf12Renal function QTL 123.78renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)381425008141509147Rat
724523Tsu1Thymus enlargement suppressive QTL 13.84thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)370845569136091483Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)379649560177741895Rat
2292613Ept16Estrogen-induced pituitary tumorigenesis QTL 168.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)367641995130815812Rat
738019Anxrr10Anxiety related response QTL 103.9exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)358925062103925062Rat
631841Niddm39Non-insulin dependent diabetes mellitus QTL 393.36blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)370311536115311536Rat
631200Cm25Cardiac mass QTL 254.80.0001heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)381541464126563126Rat
9590136Scort3Serum corticosterone level QTL 323.370.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)34865774493657744Rat
61419Cia11Collagen induced arthritis QTL 115.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)35076614595766145Rat
61356Bp37Blood pressure QTL 373blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)35109256196092561Rat
1358905Hrtrt17Heart rate QTL 175.90.000014heart pumping trait (VT:2000009)heart rate (CMO:0000002)336721849110333156Rat
1558650Cm48Cardiac mass QTL 4840.0001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)35076614595766145Rat
8694196Abfw2Abdominal fat weight QTL 216.580.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)34865774493657744Rat
1358885Bp251Blood pressure QTL 2513.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)31141509147Rat
1354597Kidm13Kidney mass QTL 132.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)342158111124558371Rat
8552950Pigfal12Plasma insulin-like growth factor 1 level QTL 127.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)34865774493657744Rat
8694386Bw159Body weight QTL 1594.520.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)34865774493657744Rat
1354604Bw36Body weight QTL 362.9body mass (VT:0001259)body weight (CMO:0000012)342158111124558371Rat
1358888Bp264Blood pressure QTL 2644.43arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)35675975141509147Rat
1358186Ept2Estrogen-induced pituitary tumorigenesis QTL 28.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)367641995130815812Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
6 12 28 43 65 67 41 29 41 6 187 83 10 21 49 62 26 1 1

Sequence


Ensembl Acc Id: ENSRNOT00000009903   ⟹   ENSRNOP00000009903
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl390,295,842 - 90,307,752 (-)Ensembl
mRatBN7.2 Ensembl369,889,170 - 69,901,079 (-)Ensembl
Rnor_6.0 Ensembl372,207,113 - 72,219,246 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000102834   ⟹   ENSRNOP00000095023
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl390,295,842 - 90,307,752 (-)Ensembl
mRatBN7.2 Ensembl369,889,170 - 69,901,079 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000114989   ⟹   ENSRNOP00000080077
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl390,295,682 - 90,303,736 (-)Ensembl
mRatBN7.2 Ensembl369,889,010 - 69,897,063 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000173109   ⟹   ENSRNOP00000109939
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl390,296,251 - 90,307,752 (-)Ensembl
RefSeq Acc Id: NM_001191739   ⟹   NP_001178668
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8390,295,682 - 90,303,736 (-)NCBI
mRatBN7.2369,889,010 - 69,897,063 (-)NCBI
Rnor_6.0372,207,151 - 72,215,210 (-)NCBI
Rnor_5.0378,728,182 - 78,740,150 (-)NCBI
Celera369,248,302 - 69,252,187 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006234464   ⟹   XP_006234526
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8390,295,685 - 90,307,769 (-)NCBI
mRatBN7.2369,889,013 - 69,901,096 (-)NCBI
Rnor_6.0372,207,150 - 72,219,209 (-)NCBI
Rnor_5.0378,728,182 - 78,740,150 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001178668 (Get FASTA)   NCBI Sequence Viewer  
  XP_006234526 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL79318 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000009903
  ENSRNOP00000009903.5
  ENSRNOP00000080077
  ENSRNOP00000080077.1
  ENSRNOP00000095023.1
  ENSRNOP00000109939.1
RefSeq Acc Id: NP_001178668   ⟸   NM_001191739
- UniProtKB: D3ZWP4 (UniProtKB/TrEMBL),   A0A8I5ZP11 (UniProtKB/TrEMBL),   A0A8I6ALV6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006234526   ⟸   XM_006234464
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSRNOP00000009903   ⟸   ENSRNOT00000009903
Ensembl Acc Id: ENSRNOP00000080077   ⟸   ENSRNOT00000114989
Ensembl Acc Id: ENSRNOP00000095023   ⟸   ENSRNOT00000102834
Ensembl Acc Id: ENSRNOP00000109939   ⟸   ENSRNOT00000173109
Protein Domains
Calponin-homology (CH)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZWP4-F1-model_v2 AlphaFold D3ZWP4 1-470 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13692185
Promoter ID:EPDNEW_R2710
Type:multiple initiation site
Name:Smtnl1_1
Description:smoothelin-like 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0372,219,131 - 72,219,191EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311701 AgrOrtholog
BioCyc Gene G2FUF-49154 BioCyc
Ensembl Genes ENSRNOG00000007516 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000009903 ENTREZGENE
  ENSRNOT00000009903.9 UniProtKB/TrEMBL
  ENSRNOT00000102834.2 UniProtKB/TrEMBL
  ENSRNOT00000114989 ENTREZGENE
  ENSRNOT00000114989.2 UniProtKB/TrEMBL
  ENSRNOT00000173109.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.418.10 UniProtKB/TrEMBL
InterPro Calponin-like_dom_sf UniProtKB/TrEMBL
  Calponin_act-bd UniProtKB/TrEMBL
  F-actin_Monoox_Mical UniProtKB/TrEMBL
KEGG Report rno:311167 UniProtKB/TrEMBL
NCBI Gene 311167 ENTREZGENE
PANTHER CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED UniProtKB/TrEMBL
  SMOOTHELIN-LIKE PROTEIN 1 UniProtKB/TrEMBL
Pfam PF00307 UniProtKB/TrEMBL
PhenoGen Smtnl1 PhenoGen
PROSITE PS50021 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000007516 RatGTEx
SMART SM00033 UniProtKB/TrEMBL
Superfamily-SCOP Calponin-homology UniProtKB/TrEMBL
UniProt A0A8I5ZP11 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ALV6 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LGJ0_RAT UniProtKB/TrEMBL
  D3ZWP4 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Smtnl1  smoothelin-like 1   Smtnl1_predicted  smoothelin-like 1 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Smtnl1_predicted  smoothelin-like 1 (predicted)  RGD1311701_predicted  similar to RIKEN cDNA 1110030K22 (predicted)  Symbol and Name updated 1299863 APPROVED
2005-01-20 RGD1311701_predicted  similar to RIKEN cDNA 1110030K22 (predicted)  LOC311167_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC311167_predicted  similar to RIKEN cDNA 1110030K22 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL