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Gene: Mapk1ip1l (mitogen-activated protein kinase 1 interacting protein 1-like) Rattus norvegicus

Analyze

Symbol:

Mapk1ip1l

Name:

mitogen-activated protein kinase 1 interacting protein 1-like

RGD ID:

1311455

Description:

Orthologous to human MAPK1IP1L (mitogen-activated protein kinase 1 interacting protein 1 like); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acetamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC361028; MAPK-interacting and spindle-stabilizing protein-like; RGD1311455; similar to MAPK-interacting and spindle-stabilizing protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	23,024,757 - 23,051,189 (+)	NCBI	GRCr8	GRCr8		GRCr8
mRatBN7.2	15	20,545,043 - 20,571,466 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	20,545,059 - 20,569,674 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	15	23,325,683 - 23,352,110 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	24,283,645 - 24,310,072 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	22,533,612 - 22,559,851 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	24,078,280 - 24,100,546 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	24,078,280 - 24,101,821 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	15	28,019,022 - 28,046,006 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	15	23,250,737 - 23,274,011 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	15	20,939,588 - 20,961,662 (+)	NCBI		Celera
RGSC_v3.1	15	23,266,224 - 23,289,390 (+)	NCBI
Cytogenetic Map	15	p14	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

3,4-methylenedioxymethamphetamine (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

captan (ISO)

carbon nanotube (ISO)

cisplatin (ISO)

cyclosporin A (ISO)

deguelin (ISO)

dicrotophos (ISO)

diethyl maleate (ISO)

epoxiconazole (ISO)

folic acid (ISO)

folpet (ISO)

FR900359 (ISO)

fulvestrant (ISO)

gentamycin (EXP)

hydrogen peroxide (ISO)

ivermectin (ISO)

methapyrilene (EXP)

methimazole (EXP)

paracetamol (EXP,ISO)

sodium arsenate (ISO)

Soman (EXP)

succimer (ISO)

sulfadimethoxine (EXP)

theophylline (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932

Genomics

Comparative Map Data

Mapk1ip1l
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	23,024,757 - 23,051,189 (+)	NCBI	GRCr8	GRCr8		GRCr8
mRatBN7.2	15	20,545,043 - 20,571,466 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	20,545,059 - 20,569,674 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	15	23,325,683 - 23,352,110 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	24,283,645 - 24,310,072 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	22,533,612 - 22,559,851 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	24,078,280 - 24,100,546 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	24,078,280 - 24,101,821 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	15	28,019,022 - 28,046,006 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	15	23,250,737 - 23,274,011 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	15	20,939,588 - 20,961,662 (+)	NCBI		Celera
RGSC_v3.1	15	23,266,224 - 23,289,390 (+)	NCBI
Cytogenetic Map	15	p14	NCBI

MAPK1IP1L
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	55,051,647 - 55,070,194 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	55,051,647 - 55,070,194 (+)	Ensembl			hg38	GRCh38
GRCh37	14	55,518,365 - 55,536,912 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	54,588,115 - 54,606,665 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	14	54,588,153 - 54,605,973	NCBI
Celera	14	35,567,856 - 35,586,404 (+)	NCBI		Celera
Cytogenetic Map	14	q22.3	NCBI
HuRef	14	35,680,990 - 35,699,535 (+)	NCBI		HuRef
CHM1_1	14	55,456,982 - 55,475,551 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	49,256,836 - 49,275,383 (+)	NCBI		T2T-CHM13v2.0

Mapk1ip1l
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	47,535,731 - 47,560,663 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	47,535,723 - 47,560,661 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	14	47,298,274 - 47,323,206 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	47,298,266 - 47,323,204 (+)	Ensembl			mm10	GRCm38
MGSCv37	14	47,917,989 - 47,942,766 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	14	46,220,191 - 46,244,968 (+)	NCBI		MGSCv36	mm8
Celera	14	43,484,886 - 43,510,380 (+)	NCBI		Celera
Cytogenetic Map	14	C1	NCBI
cM Map	14	24.6	NCBI

Mapk1ip1l
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955409	8,504,796 - 8,520,029 (-)	Ensembl
ChiLan1.0	NW_004955409	8,500,849 - 8,519,620 (-)	NCBI	ChiLan1.0	ChiLan1.0

MAPK1IP1L
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	56,173,361 - 56,191,664 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	55,389,868 - 55,408,172 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	35,638,690 - 35,656,992 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	53,913,344 - 53,931,241 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	53,913,344 - 53,931,203 (+)	Ensembl			panPan2	panpan1.1

MAPK1IP1L
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	30,902,532 - 30,918,352 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	30,893,315 - 30,914,210 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	30,670,529 - 30,686,965 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	31,161,702 - 31,178,138 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	31,161,656 - 31,178,023 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	30,765,007 - 30,781,434 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	30,842,064 - 30,858,503 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	31,206,462 - 31,222,873 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Mapk1ip1l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	74,317,280 - 74,331,151 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936697	91,485 - 105,305 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936697	91,436 - 105,315 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MAPK1IP1L
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	184,401,342 - 184,416,952 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	184,401,333 - 184,416,405 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	204,908,547 - 204,919,943 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MAPK1IP1L
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	32,229,567 - 32,244,225 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	32,240,008 - 32,242,931 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666053	20,466,090 - 20,480,624 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mapk1ip1l
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624731	14,343,949 - 14,354,596 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624731	14,340,288 - 14,354,979 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Mapk1ip1l
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	12	75,738,096 - 75,743,595 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Mapk1ip1l
148 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	231
Count of miRNA genes:	152
Interacting mature miRNAs:	171
Transcripts:	ENSRNOT00000015511, ENSRNOT00000063807
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1641913	Colcr2	Colorectal carcinoma resistance QTL 2	6.57	0.0197	intestine integrity trait (VT:0010554)	poorly differentiated malignant colorectal tumor number (CMO:0002076)	15	2315759	47315759	Rat
61424	Scl1	Serum cholesterol level QTL 1	7.7	0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	15	19155762	87086765	Rat
10401805	Kidm51	Kidney mass QTL 51			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	15	2785923	47785923	Rat
5684946	Bss98	Bone structure and strength QTL 98	3.9	0.0026	tibia strength trait (VT:1000284)	tibia ultimate force (CMO:0001734)	15	1	39411584	Rat
1354657	Despr13	Despair related QTL 13		0.0022	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	15	1	32342855	Rat
2317750	Glom26	Glomerulus QTL 26	4.3		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	15	14926594	71614418	Rat
1641887	Alcrsp14	Alcohol response QTL 14			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	15	1	44836456	Rat
631550	Bw7	Body weight QTL 7	3.6		body mass (VT:0001259)	body weight (CMO:0000012)	15	22336351	67336351	Rat
738017	Hcas7	Hepatocarcinoma susceptibility QTL 7	2.91		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)	15	2315759	53331089	Rat
10755503	Bp391	Blood pressure QTL 391	2.37		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	15	22728353	42072050	Rat
5685002	Bss103	Bone structure and strength QTL 103	2.8		tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	15	16911521	32439851	Rat
2324620	Coatc3	Coat color QTL 3			coat/hair pigmentation trait (VT:0010463)	pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)	15	22336351	52597086	Rat

Markers in Region

RH130631

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	15	20,567,818 - 20,568,013 (+)	MAPPER	mRatBN7.2
Rnor_6.0	15	24,101,351 - 24,101,545	NCBI	Rnor6.0
Rnor_5.0	15	28,042,093 - 28,042,287	UniSTS	Rnor5.0
RGSC_v3.4	15	23,274,820 - 23,275,014	UniSTS	RGSC3.4
Celera	15	20,962,471 - 20,962,665	UniSTS
Cytogenetic Map	15	p14	UniSTS

RH141675

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	15	20,560,899 - 20,561,118 (+)	MAPPER	mRatBN7.2
Rnor_6.0	15	24,094,433 - 24,094,651	NCBI	Rnor6.0
Rnor_5.0	15	28,035,175 - 28,035,393	UniSTS	Rnor5.0
RGSC_v3.4	15	23,267,902 - 23,268,120	UniSTS	RGSC3.4
Celera	15	20,955,553 - 20,955,771	UniSTS
RH 3.4 Map	15	161.7	UniSTS
Cytogenetic Map	15	p14	UniSTS

RH143605

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	10,005,058 - 10,005,190 (+)	MAPPER	mRatBN7.2
mRatBN7.2	15	20,568,085 - 20,568,217 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	55,000,431 - 55,000,562	NCBI	Rnor6.0
Rnor_6.0	15	24,101,618 - 24,101,749	NCBI	Rnor6.0
Rnor_5.0	15	28,042,360 - 28,042,491	UniSTS	Rnor5.0
Rnor_5.0	11	58,164,471 - 58,164,602	UniSTS	Rnor5.0
RGSC_v3.4	15	23,275,087 - 23,275,218	UniSTS	RGSC3.4
Celera	15	20,962,738 - 20,962,869	UniSTS
Cytogenetic Map	15	p14	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108373	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001401662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274393	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274394	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC167004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474040	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000015511 ⟹ ENSRNOP00000015511

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	15	20,545,059 - 20,561,520 (+)	Ensembl
Rnor_6.0 Ensembl	15	24,078,280 - 24,100,546 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000063807 ⟹ ENSRNOP00000059047

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	15	24,078,282 - 24,101,821 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000100955 ⟹ ENSRNOP00000089693

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	15	20,555,751 - 20,569,674 (+)	Ensembl

RefSeq Acc Id:

NM_001108373 ⟹ NP_001101843

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	23,024,768 - 23,051,189 (+)	NCBI
mRatBN7.2	15	20,545,043 - 20,571,466 (+)	NCBI
Rnor_6.0	15	24,078,280 - 24,100,546 (+)	NCBI
Rnor_5.0	15	28,019,022 - 28,046,006 (+)	NCBI
RGSC_v3.4	15	23,250,737 - 23,274,011 (+)	RGD
Celera	15	20,939,588 - 20,961,662 (+)	RGD

Sequence:

show sequence

CCGGGAGGAGCCGTGTCGGTGCCGCCTCGGTCCATCAGGCCTCCTGCGGTTCTCCATTGCCCGT
CTCTCTGGATTCACCGTCGCCACTGTGCCGCGCCTAGGACTCGGATCCTGCCGGGAAAATGTCA
GATGAATTTTCGTTGGCAGATGCGCTACCTGAACAGTCCTCTGCCAAAACGCCTGCTGTGACCA
ACACAAAAGCTGGCCATTCTCCTCAGGGCTGGCCAGGCTCCAGCCCTTGGAGTAATCCAAGCGC
CCCCCCTGCAATGCCGTCTGGACTCCCACCGAGTAGTGCAGCACCCTCTACTGTGCCTTTTGGA
CCAGTACCAACAGGAATGTATCCCTCCATGCCTCCAGCCGGACCACCCCCAGGACCCTTTCCTC
CTTCTGGACCATCATGTCCCCCACCTGGTGTTCCTTATCCAGCCCCTGCTGTGCCAGGCCCTGG
CCCCACAGGGCCATACGCTACACCAAATATGCCCCTTCCAGAGCTACCTAGGCCATACGGTGCG
CCCACAGATCCAGCTGCAGCTGGTACTTTAGGTCCATGGGGATCCATCTCTTCTGGACCTTGGG
CACCAGGAATTGCGGGGCAGCATCCTAATATGCCGTATCGATCTCCAGGGCCATACCCCACTGT
TCCTCCTCCAGTGTCGGGAGCACCGCCTGTTCCGTGGGGCACTGTGCCACCGGGAGCCTGGGGA
CCACCAGCACCATATCCTGGCCCCGCAGGATCATACCCCACGCCAGGACCCCACCCTACTCTGA
ATAATCCTTACCAAGTGCCTTCAGGACCTGCTGGTGCTCCGCCAATGCCTGGTGGCCCCCACTC
TTACCATTAAGGTGACAGTGGATGAAGAAATGGCGTGTTGCCTTTTGAAGTATATGTATATGCA
CACGAAAGCATATATAATGGCTGGTTTCGCTGTTGGTTGAGGGCATTTGTGAAAGAACTTTTGC
ACCTCAGCTCCTGCTTCATGTATTTGGATATGTAGACCATCACGTGGGTACAATCAGATAATAT
GTGGAAGTGAATCATTTCAAGTGTGGTTAATGTGATTATGTGTATTGAATAACATTTGATATTT
GTTTAAAGCATAGCTATGCCCTCAAAATATAAAATAACATGGATTATTGTTAGAATCTACAACT
TGACAAAAGTCAAATACTTTTTCTAATCACCCCACAACCACCACACCCCATATAACTAAGAGTC
ATTTGAAATGTGAGCTCCTCCTACTACACAAA

hide sequence

RefSeq Acc Id:

NM_001401662 ⟹ NP_001388591

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	23,024,768 - 23,051,189 (+)	NCBI
mRatBN7.2	15	20,545,043 - 20,571,466 (+)	NCBI

RefSeq Acc Id:

XM_063274393 ⟹ XP_063130463

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	23,024,757 - 23,046,274 (+)	NCBI

RefSeq Acc Id:

XM_063274394 ⟹ XP_063130464

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	23,024,761 - 23,051,186 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101843	(Get FASTA)	NCBI Sequence Viewer
	NP_001388591	(Get FASTA)	NCBI Sequence Viewer
	XP_063130463	(Get FASTA)	NCBI Sequence Viewer
	XP_063130464	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI67004	(Get FASTA)	NCBI Sequence Viewer
	EDL88348	(Get FASTA)	NCBI Sequence Viewer
	EDL88349	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000015511
	ENSRNOP00000015511.6
	ENSRNOP00000112109.1

RefSeq Acc Id:	NP_001101843 ⟸ NM_001108373
- Peptide Label:	isoform 2
- UniProtKB:	A6KE43 (UniProtKB/TrEMBL), B2RZ29 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSDEFSLADALPEQSSAKTPAVTNTKAGHSPQGWPGSSPWSNPSAPPAMPSGLPPSSAAPSTVP FGPVPTGMYPSMPPAGPPPGPFPPSGPSCPPPGVPYPAPAVPGPGPTGPYATPNMPLPELPRPY GAPTDPAAAGTLGPWGSISSGPWAPGIAGQHPNMPYRSPGPYPTVPPPVSGAPPVPWGTVPPGA WGPPAPYPGPAGSYPTPGPHPTLNNPYQVPSGPAGAPPMPGGPHSYH hide sequence

Ensembl Acc Id:

ENSRNOP00000059047 ⟸ ENSRNOT00000063807

Ensembl Acc Id:

ENSRNOP00000015511 ⟸ ENSRNOT00000015511

Ensembl Acc Id:

ENSRNOP00000089693 ⟸ ENSRNOT00000100955

RefSeq Acc Id:	NP_001388591 ⟸ NM_001401662
- Peptide Label:	isoform 1
- UniProtKB:	D3ZNX9 (UniProtKB/TrEMBL), A6KE44 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063130463 ⟸ XM_063274393
- Peptide Label:	isoform X1
- UniProtKB:	A6KE44 (UniProtKB/TrEMBL), D3ZNX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063130464 ⟸ XM_063274394
- Peptide Label:	isoform X2
- UniProtKB:	A6KE43 (UniProtKB/TrEMBL), B2RZ29 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B2RZ29-F1-model_v2	AlphaFold	B2RZ29	1-240	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13699611

Promoter ID:

EPDNEW_R10135

Type:

initiation region

Name:

Mapk1ip1l_1

Description:

mitogen-activated protein kinase 1 interacting protein 1-like

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	15	24,078,269 - 24,078,329	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311455	AgrOrtholog
BioCyc Gene	G2FUF-14154	BioCyc
Ensembl Genes	ENSRNOG00000011611	Ensembl
	ENSRNOG00000077396	ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000015511	ENTREZGENE
	ENSRNOT00000015511.10	UniProtKB/TrEMBL
	ENSRNOT00000159163.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:9090872	IMAGE-MGC_LOAD
InterPro	MISS	UniProtKB/TrEMBL
KEGG Report	rno:361028	UniProtKB/TrEMBL
MGC_CLONE	MGC:189170	IMAGE-MGC_LOAD
NCBI Gene	361028	ENTREZGENE
PANTHER	MAPK-INTERACTING AND SPINDLE-STABILIZING PROTEIN-LIKE	UniProtKB/TrEMBL
	PTHR35973	UniProtKB/TrEMBL
Pfam	MISS	UniProtKB/TrEMBL
PhenoGen	Mapk1ip1l	PhenoGen
PRINTS	PRICHEXTENSN	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000011611	RatGTEx
	ENSRNOG00000077396	RatGTEx
UniProt	A0ABK0M831_RAT	UniProtKB/TrEMBL
	A6KE43	ENTREZGENE, UniProtKB/TrEMBL
	A6KE44	ENTREZGENE, UniProtKB/TrEMBL
	B2RZ29	ENTREZGENE, UniProtKB/TrEMBL
	D3ZNX9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-02-27	Mapk1ip1l	mitogen-activated protein kinase 1 interacting protein 1-like	RGD1311455_predicted	similar to MAPK-interacting and spindle-stabilizing protein (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1311455_predicted	similar to MAPK-interacting and spindle-stabilizing protein (predicted)	LOC361028_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC361028_predicted	similar to MAPK-interacting and spindle-stabilizing protein (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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