Dmtn (dematin actin binding protein) - Rat Genome Database

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Gene: Dmtn (dematin actin binding protein) Rattus norvegicus
Analyze
Symbol: Dmtn
Name: dematin actin binding protein
RGD ID: 1311419
Description: Predicted to enable actin filament binding activity; signaling receptor binding activity; and spectrin binding activity. Predicted to be involved in several processes, including cellular response to cAMP; negative regulation of cell-substrate adhesion; and regulation of plasma membrane bounded cell projection assembly. Predicted to be located in several cellular components, including cytoskeleton; platelet dense tubular network membrane; and postsynaptic density. Predicted to be active in actin cytoskeleton; plasma membrane; and synapse. Orthologous to human DMTN (dematin actin binding protein); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: dematin; Epb4.9; Epb49; erythrocyte membrane protein band 4.9; erythrocyte membrane protein band 4.9 (dematin); erythrocyte protein band 4.9; LOC361069
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81552,087,667 - 52,111,956 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1552,087,667 - 52,112,128 (-)EnsemblGRCr8
mRatBN7.21545,677,974 - 45,702,261 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1545,677,977 - 45,705,601 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1549,795,828 - 49,820,113 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01550,907,337 - 50,931,630 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01547,766,648 - 47,790,933 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01552,292,762 - 52,320,385 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1552,292,765 - 52,320,385 (-)Ensemblrn6Rnor6.0
Rnor_5.01556,016,279 - 56,043,902 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41551,004,498 - 51,032,118 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1545,356,046 - 45,383,646 (-)NCBICelera
RGSC_v3.11551,021,363 - 51,047,921 (-)NCBI
Cytogenetic Map15p11NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-butoxyethanol  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,3',5-triiodo-L-thyronine  (ISO)
3-phenylprop-2-enal  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (ISO)
amitrole  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (ISO)
bisphenol A  (EXP,ISO)
bromobenzene  (EXP)
butanal  (ISO)
Butylbenzyl phthalate  (ISO)
C60 fullerene  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (EXP)
cyclosporin A  (ISO)
D-glucose  (ISO)
diazinon  (ISO)
dieldrin  (ISO)
dioxygen  (ISO)
doxorubicin  (ISO)
ethanol  (ISO)
fucoxanthin  (ISO)
gentamycin  (EXP)
glucose  (ISO)
GSK-J4  (ISO)
lead(0)  (ISO)
leflunomide  (EXP)
methimazole  (EXP)
Monobutylphthalate  (ISO)
N-methyl-4-phenylpyridinium  (EXP)
nitrofen  (EXP)
okadaic acid  (ISO)
oxaliplatin  (EXP)
paracetamol  (EXP,ISO)
paraquat  (EXP)
phenobarbital  (ISO)
phenytoin  (EXP)
pirinixic acid  (ISO)
potassium dichromate  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (EXP,ISO)
sunitinib  (ISO)
tamoxifen  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (EXP)
titanium dioxide  (ISO)
topotecan  (EXP)
trichloroethene  (EXP)
trimellitic anhydride  (ISO)
triphenyl phosphate  (ISO)
triptonide  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vancomycin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10565303   PMID:12011427   PMID:12477932   PMID:17114649   PMID:18347014   PMID:18505823   PMID:18723693   PMID:19241372   PMID:22927433   PMID:23060452   PMID:23355471  


Genomics

Comparative Map Data
Dmtn
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81552,087,667 - 52,111,956 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1552,087,667 - 52,112,128 (-)EnsemblGRCr8
mRatBN7.21545,677,974 - 45,702,261 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1545,677,977 - 45,705,601 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1549,795,828 - 49,820,113 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01550,907,337 - 50,931,630 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01547,766,648 - 47,790,933 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01552,292,762 - 52,320,385 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1552,292,765 - 52,320,385 (-)Ensemblrn6Rnor6.0
Rnor_5.01556,016,279 - 56,043,902 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41551,004,498 - 51,032,118 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1545,356,046 - 45,383,646 (-)NCBICelera
RGSC_v3.11551,021,363 - 51,047,921 (-)NCBI
Cytogenetic Map15p11NCBI
DMTN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38822,048,931 - 22,082,525 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl822,048,995 - 22,082,527 (+)Ensemblhg38GRCh38
GRCh37821,906,442 - 21,940,036 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36821,972,680 - 21,995,982 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34821,972,679 - 21,995,982NCBI
Celera820,873,144 - 20,902,318 (+)NCBICelera
Cytogenetic Map8p21.3NCBI
HuRef820,453,493 - 20,482,734 (+)NCBIHuRef
CHM1_1822,112,744 - 22,141,695 (+)NCBICHM1_1
T2T-CHM13v2.0822,322,887 - 22,356,487 (+)NCBIT2T-CHM13v2.0
Dmtn
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391470,839,624 - 70,873,488 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1470,838,703 - 70,873,418 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381470,602,184 - 70,636,048 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1470,601,263 - 70,636,048 (-)Ensemblmm10GRCm38
MGSCv371471,003,477 - 71,029,961 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361469,338,750 - 69,365,234 (-)NCBIMGSCv36mm8
Celera1468,145,198 - 68,173,371 (-)NCBICelera
Cytogenetic Map14D2NCBI
cM Map1436.32NCBI
Dmtn
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540345,566,180 - 45,578,079 (+)Ensembl
ChiLan1.0NW_00495540345,566,180 - 45,579,062 (+)NCBIChiLan1.0ChiLan1.0
DMTN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2740,550,804 - 40,584,490 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1816,275,936 - 16,309,702 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0821,293,759 - 21,327,600 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1818,238,541 - 18,267,291 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl818,251,886 - 18,266,229 (+)EnsemblpanPan2panpan1.1
DMTN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12535,163,867 - 35,188,761 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2535,165,876 - 35,176,754 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2535,752,999 - 35,778,392 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02535,374,965 - 35,400,383 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2535,375,297 - 35,400,794 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12535,320,204 - 35,345,608 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02535,177,036 - 35,200,175 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02535,332,536 - 35,355,698 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Dmtn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494312,659,342 - 12,685,809 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365555,896,471 - 5,910,098 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365555,884,746 - 5,911,171 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DMTN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl146,321,870 - 6,346,865 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1146,315,643 - 6,346,722 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2146,757,571 - 6,788,163 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DMTN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1820,120,054 - 20,154,368 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl820,125,703 - 20,152,985 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605222,082,446 - 22,116,979 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dmtn
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475817,655,803 - 17,671,666 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462475817,640,938 - 17,672,709 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Dmtn
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11253,734,092 - 53,750,476 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Dmtn
110 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:524
Count of miRNA genes:201
Interacting mature miRNAs:260
Transcripts:ENSRNOT00000016555, ENSRNOT00000067776
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300144Rf23Renal function QTL 233.61renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)1544806773104695021Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15231575953331089Rat
152025253Hrtrt24Heart rate QTL 243.82heart pumping trait (VT:2000009)153185580392671517Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152852773273527732Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)154367724488677244Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)154367724488677244Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)1525285835104695021Rat
2324620Coatc3Coat color QTL 3coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)152233635152597086Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)1525285835104695021Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151915576287086765Rat
1598828Glom14Glomerulus QTL 142.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)154046315285463152Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151492659471614418Rat
631550Bw7Body weight QTL 73.6body mass (VT:0001259)body weight (CMO:0000012)152233635167336351Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)154367724488677244Rat
2306968Anxrr23Anxiety related response QTL 234.83reflex trait (VT:0001961)amplitude of the acoustic startle response (CMO:0001520)154480677352597086Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)1525285835104695021Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)154367724488677244Rat
7411725Strs7Sensitivity to stroke QTL 73.8cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)154446544756583797Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)154367724488677244Rat

Markers in Region
RH129121  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21545,677,976 - 45,678,154 (+)MAPPERmRatBN7.2
Rnor_6.01552,292,765 - 52,292,942NCBIRnor6.0
Rnor_5.01556,016,282 - 56,016,459UniSTSRnor5.0
RGSC_v3.41551,004,498 - 51,004,675UniSTSRGSC3.4
Celera1545,356,046 - 45,356,223UniSTS
Cytogenetic Map15p11UniSTS
AU047935  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81552,112,211 - 52,112,430 (+)Marker Load Pipeline
mRatBN7.21545,702,516 - 45,702,737 (+)MAPPERmRatBN7.2
Rnor_6.01552,317,303 - 52,317,521NCBIRnor6.0
Rnor_5.01556,040,820 - 56,041,038UniSTSRnor5.0
RGSC_v3.41551,029,036 - 51,029,254UniSTSRGSC3.4
Celera1545,380,564 - 45,380,782UniSTS
Cytogenetic Map15p11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 161 91 90 59 91 59 6 355 191 11 140 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000016555   ⟹   ENSRNOP00000016555
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1552,087,670 - 52,112,128 (-)Ensembl
mRatBN7.2 Ensembl1545,677,977 - 45,702,433 (-)Ensembl
Rnor_6.0 Ensembl1552,292,765 - 52,317,219 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000067776   ⟹   ENSRNOP00000059386
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1552,087,670 - 52,112,128 (-)Ensembl
mRatBN7.2 Ensembl1545,677,977 - 45,705,601 (-)Ensembl
Rnor_6.0 Ensembl1552,292,765 - 52,320,385 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000097002   ⟹   ENSRNOP00000084709
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1552,087,667 - 52,103,864 (-)Ensembl
mRatBN7.2 Ensembl1545,677,977 - 45,704,833 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000106565   ⟹   ENSRNOP00000097697
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1552,087,670 - 52,112,128 (-)Ensembl
mRatBN7.2 Ensembl1545,677,977 - 45,704,833 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000113196   ⟹   ENSRNOP00000093095
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1552,089,075 - 52,103,727 (-)Ensembl
mRatBN7.2 Ensembl1545,679,382 - 45,693,827 (-)Ensembl
RefSeq Acc Id: NM_001394746   ⟹   NP_001381675
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81552,087,667 - 52,111,956 (-)NCBI
mRatBN7.21545,677,974 - 45,702,261 (-)NCBI
RefSeq Acc Id: NM_001394747   ⟹   NP_001381676
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81552,087,667 - 52,111,956 (-)NCBI
mRatBN7.21545,677,974 - 45,702,261 (-)NCBI
RefSeq Acc Id: NM_001394748   ⟹   NP_001381677
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81552,087,667 - 52,103,864 (-)NCBI
mRatBN7.21545,677,974 - 45,694,169 (-)NCBI
Ensembl Acc Id: ENSRNOP00000059386   ⟸   ENSRNOT00000067776
Ensembl Acc Id: ENSRNOP00000016555   ⟸   ENSRNOT00000016555
Ensembl Acc Id: ENSRNOP00000084709   ⟸   ENSRNOT00000097002
Ensembl Acc Id: ENSRNOP00000097697   ⟸   ENSRNOT00000106565
Ensembl Acc Id: ENSRNOP00000093095   ⟸   ENSRNOT00000113196
RefSeq Acc Id: NP_001381676   ⟸   NM_001394747
- Peptide Label: isoform 2
- UniProtKB: A6HTM3 (UniProtKB/TrEMBL),   D4A559 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001381675   ⟸   NM_001394746
- Peptide Label: isoform 1
RefSeq Acc Id: NP_001381677   ⟸   NM_001394748
- Peptide Label: isoform 3
- UniProtKB: A0A8I5ZXT2 (UniProtKB/TrEMBL)
Protein Domains
HP   Putative adherens-junction anchoring

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B2GUY4-F1-model_v2 AlphaFold B2GUY4 1-354 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699817
Promoter ID:EPDNEW_R10340
Type:single initiation site
Name:Dmtn_1
Description:dematin actin binding protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01552,320,378 - 52,320,438EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311419 AgrOrtholog
BioCyc Gene G2FUF-13207 BioCyc
Ensembl Genes ENSRNOG00000012273 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000016555.7 UniProtKB/TrEMBL
  ENSRNOT00000067776 ENTREZGENE
  ENSRNOT00000067776.5 UniProtKB/TrEMBL
  ENSRNOT00000097002 ENTREZGENE
  ENSRNOT00000097002.2 UniProtKB/TrEMBL
  ENSRNOT00000106565 ENTREZGENE
  ENSRNOT00000106565.2 UniProtKB/TrEMBL
  ENSRNOT00000113196.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.950.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:8374835 IMAGE-MGC_LOAD
InterPro AbLIM_anchor UniProtKB/TrEMBL
  Actin-binding_LIM UniProtKB/TrEMBL
  Villin_headpiece UniProtKB/TrEMBL
  Villin_headpiece_dom_sf UniProtKB/TrEMBL
MGC_CLONE MGC:187700 IMAGE-MGC_LOAD
NCBI Gene 361069 ENTREZGENE
PANTHER ACTIN-BINDING LIM PROTEIN UniProtKB/TrEMBL
  DEMATIN UniProtKB/TrEMBL
Pfam AbLIM_anchor UniProtKB/TrEMBL
  VHP UniProtKB/TrEMBL
PhenoGen Dmtn PhenoGen
PROSITE PS51089 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000012273 RatGTEx
SMART VHP UniProtKB/TrEMBL
Superfamily-SCOP SSF47050 UniProtKB/TrEMBL
UniProt A0A8I5ZXT2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AIW7_RAT UniProtKB/TrEMBL
  A0A8I6AT61_RAT UniProtKB/TrEMBL
  A6HTM3 ENTREZGENE, UniProtKB/TrEMBL
  B2GUY4_RAT UniProtKB/TrEMBL
  D4A559 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary E9PT80 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-06-05 Dmtn  dematin actin binding protein  Epb49  erythrocyte membrane protein band 4.9 (dematin)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2011-01-24 Epb49  erythrocyte membrane protein band 4.9 (dematin)  Epb49  erythrocyte membrane protein band 4.9  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Epb4.9  erythrocyte protein band 4.9   Epb4.9_predicted  erythrocyte protein band 4.9 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Epb4.9_predicted  erythrocyte protein band 4.9 (predicted)      Symbol and Name status set to approved 70820 APPROVED