Dcaf11 (DDB1 and CUL4 associated factor 11)

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Gene: Dcaf11 (DDB1 and CUL4 associated factor 11) Rattus norvegicus

Analyze

Symbol:

Dcaf11

Name:

DDB1 and CUL4 associated factor 11

RGD ID:

1311288

Description:

Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to act upstream of or within several processes, including exploration behavior; protein stabilization; and respiratory system process. Predicted to be located in nucleoplasm. Predicted to be part of Cul4-RING E3 ubiquitin ligase complex. Orthologous to human DCAF11 (DDB1 and CUL4 associated factor 11); INTERACTS WITH (+)-schisandrin B; 3-chloropropane-1,2-diol; 5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

DDB1- and CUL4-associated factor 11; LOC305895; MGC109419; MGC94719; WD repeat domain 23; WD repeat-containing protein 23; Wdr23

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DCAF11 (DDB1 and CUL4 associated factor 11)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Dcaf11 (DDB1 and CUL4 associated factor 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dcaf11 (DDB1 and CUL4 associated factor 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DCAF11 (DDB1 and CUL4 associated factor 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DCAF11 (DDB1 and CUL4 associated factor 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Dcaf11 (DDB1 and CUL4 associated factor 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DCAF11 (DDB1 and CUL4 associated factor 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DCAF11 (DDB1 and CUL4 associated factor 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dcaf11 (DDB1 and CUL4 associated factor 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Dcaf11 (DDB1 and CUL4 associated factor 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	DCAF11 (DDB1 and CUL4 associated factor 11)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Dcaf11 (DDB1 and CUL4 associated factor 11)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	dcaf11 (ddb1 and cul4 associated factor 11)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG9945	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	wdr-23	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	dcaf11	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	dcaf11	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	33,015,370 - 33,027,407 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	15	33,016,762 - 33,027,672 (+)	Ensembl				GRCr8
mRatBN7.2	15	29,046,744 - 29,057,450 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	29,046,826 - 29,057,669 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	15	30,892,505 - 30,903,150 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	32,039,711 - 32,050,356 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	30,282,055 - 30,292,700 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	34,233,840 - 34,244,512 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	34,234,193 - 34,244,504 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	15	38,124,048 - 38,134,707 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	15	33,691,576 - 33,701,328 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	15	28,622,724 - 28,633,369 (+)	NCBI		Celera
RGSC_v3.1	15	33,707,275 - 33,717,025 (+)	NCBI
Cytogenetic Map	15	p13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

3,3',4,4'-tetrachlorobiphenyl (ISO)

3-chloropropane-1,2-diol (EXP)

4,4'-sulfonyldiphenol (ISO)

5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole (EXP)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acrolein (ISO)

aflatoxin B1 (ISO)

alpha-pinene (ISO)

amiodarone (EXP)

aristolochic acid A (ISO)

benzbromarone (EXP)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP)

bortezomib (ISO)

cadmium dichloride (ISO)

caffeine (EXP,ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlordecone (ISO)

choline (ISO)

clofibrate (EXP)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

diethylstilbestrol (EXP)

diuron (EXP)

fenthion (ISO)

folic acid (ISO)

gentamycin (EXP)

glafenine (EXP)

hydrogen peroxide (ISO)

ivermectin (ISO)

L-ethionine (EXP)

L-methionine (ISO)

methapyrilene (EXP,ISO)

methoxyacetic acid (EXP)

methylmercury chloride (EXP)

Monobutylphthalate (EXP)

nefazodone (EXP)

nitrates (ISO)

O-methyleugenol (ISO)

okadaic acid (ISO)

omeprazole (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

perfluorohexanesulfonic acid (ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

pirinixic acid (EXP,ISO)

pregnenolone 16alpha-carbonitrile (EXP)

silicon dioxide (ISO)

tetrachloromethane (EXP,ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

valproic acid (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cognition (ISO)

exploration behavior (ISO)

gene expression (ISO)

memory (ISO)

proteasome-mediated ubiquitin-dependent protein catabolic process (IBA)

protein stabilization (ISO)

protein ubiquitination (IEA)

respiratory system process (ISO)

response to oxidative stress (ISO)

Cellular Component

Cul4-RING E3 ubiquitin ligase complex (IBA,IEA,ISO,ISS)

nucleoplasm (IEA,ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:16949367

Genomics

Comparative Map Data

Dcaf11
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	33,015,370 - 33,027,407 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	15	33,016,762 - 33,027,672 (+)	Ensembl				GRCr8
mRatBN7.2	15	29,046,744 - 29,057,450 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	29,046,826 - 29,057,669 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	15	30,892,505 - 30,903,150 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	32,039,711 - 32,050,356 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	30,282,055 - 30,292,700 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	34,233,840 - 34,244,512 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	34,234,193 - 34,244,504 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	15	38,124,048 - 38,134,707 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	15	33,691,576 - 33,701,328 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	15	28,622,724 - 28,633,369 (+)	NCBI		Celera
RGSC_v3.1	15	33,707,275 - 33,717,025 (+)	NCBI
Cytogenetic Map	15	p13	NCBI

DCAF11
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	24,114,777 - 24,125,242 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	24,114,010 - 24,125,614 (+)	Ensembl			hg38	GRCh38
GRCh37	14	24,583,986 - 24,594,451 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	23,653,861 - 23,664,291 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	14	23,653,860 - 23,664,290	NCBI
Celera	14	4,448,376 - 4,458,921 (+)	NCBI		Celera
Cytogenetic Map	14	q12	NCBI
HuRef	14	4,699,126 - 4,709,671 (+)	NCBI		HuRef
CHM1_1	14	24,582,565 - 24,593,110 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	18,313,090 - 18,323,554 (+)	NCBI		T2T-CHM13v2.0

Dcaf11
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	55,796,557 - 55,807,522 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	55,797,463 - 55,807,522 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	14	55,559,125 - 55,570,065 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	55,560,006 - 55,570,065 (+)	Ensembl			mm10	GRCm38
MGSCv37	14	56,178,869 - 56,188,902 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	14	54,514,103 - 54,524,136 (+)	NCBI		MGSCv36	mm8
Celera	14	53,364,886 - 53,374,919 (+)	NCBI		Celera
Cytogenetic Map	14	C3	NCBI
cM Map	14	28.19	NCBI

Dcaf11
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955409	36,272,184 - 36,279,872 (-)	Ensembl
ChiLan1.0	NW_004955409	36,272,184 - 36,279,985 (-)	NCBI	ChiLan1.0	ChiLan1.0

DCAF11
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	25,465,976 - 25,478,412 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	24,682,468 - 24,694,904 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	4,890,956 - 4,900,296 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	23,015,525 - 23,024,650 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	23,015,680 - 23,024,650 (+)	Ensembl			panPan2	panpan1.1

DCAF11
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	4,115,756 - 4,124,329 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	4,116,912 - 4,123,596 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	4,037,424 - 4,045,984 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	4,226,332 - 4,234,902 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	4,226,712 - 4,234,912 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	3,916,964 - 3,925,526 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	3,978,716 - 3,987,276 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	4,240,837 - 4,249,445 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Dcaf11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	35,966,258 - 35,974,161 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936722	414,831 - 422,694 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936722	414,830 - 422,722 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DCAF11
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	75,168,992 - 75,180,953 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	75,169,701 - 75,181,137 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	80,442,389 - 80,452,269 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DCAF11
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	1,100,974 - 1,110,283 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	1,101,653 - 1,111,965 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666036	12,782,646 - 12,792,028 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dcaf11
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624820	8,407,596 - 8,415,295 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624820	8,407,597 - 8,415,301 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Dcaf11
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	12	69,440,807 - 69,451,239 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Dcaf11
51 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	251
Count of miRNA genes:	160
Interacting mature miRNAs:	178
Transcripts:	ENSRNOT00000059987
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1641913	Colcr2	Colorectal carcinoma resistance QTL 2	6.57	0.0197	intestine integrity trait (VT:0010554)	poorly differentiated malignant colorectal tumor number (CMO:0002076)	15	2315759	47315759	Rat
5684946	Bss98	Bone structure and strength QTL 98	3.9	0.0026	tibia strength trait (VT:1000284)	tibia ultimate force (CMO:0001734)	15	1	39411584	Rat
1641887	Alcrsp14	Alcohol response QTL 14			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	15	1	44836456	Rat
738017	Hcas7	Hepatocarcinoma susceptibility QTL 7	2.91		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)	15	2315759	53331089	Rat
152025253	Hrtrt24	Heart rate QTL 24	3.82		heart pumping trait (VT:2000009)		15	31855803	92671517	Rat
10755503	Bp391	Blood pressure QTL 391	2.37		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	15	22728353	42072050	Rat
10054130	Srcrt8	Stress Responsive Cort QTL 8	2.18	0.0085	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	15	28527732	73527732	Rat
1578646	Bmd18	Bone mineral density QTL 18	5.2		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	15	25285835	104695021	Rat
2324620	Coatc3	Coat color QTL 3			coat/hair pigmentation trait (VT:0010463)	pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)	15	22336351	52597086	Rat
1578647	Bmd17	Bone mineral density QTL 17	4		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	15	25285835	104695021	Rat
61424	Scl1	Serum cholesterol level QTL 1	7.7	0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	15	19155762	87086765	Rat
10401805	Kidm51	Kidney mass QTL 51			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	15	2785923	47785923	Rat
2317750	Glom26	Glomerulus QTL 26	4.3		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	15	14926594	71614418	Rat
631550	Bw7	Body weight QTL 7	3.6		body mass (VT:0001259)	body weight (CMO:0000012)	15	22336351	67336351	Rat
1578660	Bss19	Bone structure and strength QTL 19	4.3		femur morphology trait (VT:0000559)	bone trabecular cross-sectional area (CMO:0002311)	15	25285835	104695021	Rat

Markers in Region

RH133568

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	15	29,057,430 - 29,057,635 (+)	MAPPER	mRatBN7.2
Rnor_6.0	15	34,244,492 - 34,244,696	NCBI	Rnor6.0
Rnor_5.0	15	38,134,687 - 38,134,891	UniSTS	Rnor5.0
RGSC_v3.4	15	33,701,313 - 33,701,517	UniSTS	RGSC3.4
Celera	15	28,633,354 - 28,633,558	UniSTS
RH 3.4 Map	15	260.81	UniSTS
Cytogenetic Map	15	p13	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001009686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_073087	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_073088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006251971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039093298	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039093299	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274253	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274254	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274255	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC081957	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC087110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC091364	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222851	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ231275	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000059987 ⟹ ENSRNOP00000056736

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	15	33,016,762 - 33,027,672 (+)	Ensembl
mRatBN7.2 Ensembl	15	29,046,826 - 29,057,669 (+)	Ensembl
Rnor_6.0 Ensembl	15	34,234,755 - 34,244,504 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000077584 ⟹ ENSRNOP00000074435

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	15	33,016,762 - 33,027,672 (+)	Ensembl
mRatBN7.2 Ensembl	15	29,046,826 - 29,057,669 (+)	Ensembl
Rnor_6.0 Ensembl	15	34,234,193 - 34,244,504 (+)	Ensembl

RefSeq Acc Id:

NM_001009686 ⟹ NP_001009686

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	33,017,655 - 33,027,407 (+)	NCBI
mRatBN7.2	15	29,047,695 - 29,057,446 (+)	NCBI
Rnor_6.0	15	34,234,755 - 34,244,507 (+)	NCBI
Rnor_5.0	15	38,124,048 - 38,134,707 (+)	NCBI
RGSC_v3.4	15	33,691,576 - 33,701,328 (+)	RGD
Celera	15	28,623,617 - 28,633,369 (+)	NCBI

Sequence:

show sequence

GAGAGGTTATCTGGGATTCGGCCACCCTGGGCCGGGGACTTTGATAGGATTGAGGAAGGTTTAT
GTTCCCGAAACCTTGGGAGCTGTCATAGCTAAAGAGAAGGAAATCTCAGTCTCCTAGAGGGGTC
ACCCCTCTAAAGATAGCTTCTGCCCCGTTTCTGGAAACCCTGATATTTCTAGAGCAGGATTTGC
TTTCACCAAACCCAATTTGGAGACAGGAGAAGTCCCTGCACAGGATATAAGGATGCTGTAACCA
GAACATGGGATCACGGAACAGCAGCAGCGCAGGATCCGGGTCCTTAGAACCCTCCGAGGGCTTG
TCCCGAAGAGGGGCTGGCCTGCGTCGTAGTGAGGAAGAAGAAGAAGAGGATGAAGATGTGGATC
TGGCCCAGGTACTGGCCTATCTCCTCCGCAGAGGCCAAGTGAGGTTGGTGCAAGGTGGAGGTGC
AGCAAATTTACAACTCATCCAGGCCCTCTCAGACTCAGAGGAAGAGCATGACAGTGCCTGGGAC
GGTCGCCTTGGAGATCGATACAACCCACCTGTGGATGCAACCCCTGACACCCGGGAGCTGGAGT
ACAATGAGATCAAAACTCGGGTGGAATTGGCCACGGGGCGGCTAGGACTCGGGAGGACTGCTCA
GGAGCATAGCTTCCCTCGAATGCTACACCAGAGAGAACGGGGCCTCTGCCACCGGGGAAGCTTC
TCCCTTGGAGAACAGTCTCGAGTGATGTCTCACTTCTTGCCCAATGATCTAAGCTTCACTGATA
CCTACTCTCAGAAGGCTTTCTGTGGCATCTACAGCAAAGATGGTCAAATCTTCATGTCCGCTTG
CCAAGATCAAACAATCCGACTGTACGACTGTCGGTATGGCCGCTTCCACAAGTTTAAAAGCATC
AAGGCCCGGGATGTAGGCTGGAGTGTCCTGGATGTGGCCTTCACTCCTGATGGAAACCACTTCC
TGTACTCCAGCTGGTCTGACTACATTCATATCTGCAGCATCTATGGGGAAGGAGACACACACAC
TGCCCTGGATTTAAGGCCAGATGAACGTCGCTTTGCTGTCTTTTCCATTGCTGTCTCCTCAGAT
GGACGAGAAGTACTAGGAGGAGCCAATGATGGCTGCCTTTATGTCTTTGACCGTGAACAAAACC
GGCGTACTCTTCAGATTGAGTCTCATGAGGATGATGTGAATGCAGTGGCCTTTGCTGACATAAG
CTCCCAGATCCTGTTCTCTGGGGGAGACGATGCCATCTGCAAAGTGTGGGACCGACGCACCATG
CGGGAGGATGACCCCAAGCCTGTGGGGGCACTGGCTGGCCACCAGGATGGCATCACCTTCATTG
ACAGCAAGGGTGATGCCCGGTATCTCATCTCCAACTCCAAAGATCAGACCATTAAGCTCTGGGA
TATCAGACGCTTTTCCAGCCGAGAAGGCATGGAAGCGTCACGACTGGCTGCCACACAGCAGAAC
TGGGACTATCGCTGGCAGCAGGTGCCCAAGAAAGCCTGGAAGAAGTTGAAGCTCCCAGGTGACA
GCTCCTTGATGACCTACAGAGGCCATGGAGTGCTTCACACTCTGATCCGATGCCGATTCTCCCC
AGCCCACAGCACGGGCCAGCAGTTCATCTACAGCGGCTGTTCTACTGGCAAAGTGGTTGTATAT
GACCTCTTAAGCGGCCACATTGTGAAGAAGCTGACCAATCACAAGGCCTGTGTGCGTGATGTCA
GTTGGCATCCCTTTGAAGAAAAGATTGTCAGCAGTTCGTGGGATGGGAGCCTACGCCTGTGGCA
GTACCGCCAAGCTGAGTACTTCCAGGATGACATGACCGAGTCTGACAGGAACAGAGTCTGTTCC
AGTGGCCCTGCTCCGGTGCCCTGCCCATCTGTGGCCTTTTCCTCACCTCAGTAGATCTGACCTC
CAGTTCTGTGTAGGGTGAATTCTCAGCATATTCTCTGCCTCCTCCTTCCTTTCCCCATTTGGGG
AGTAAGTGGAAGAACTGCTGACACTGGGTAGTGAGAGACAGAAACCCAGAGTCTGGGCCCAGGC
TGAGCCTGGACTACCCGTCCCCAAACTGGGCCAAGTGGTTTCCTCATGCATTCATACCCAGTCT
GCTTGGATTTCTATCTCTAGCCAGAATGTGGCCGGACATCCATTATCTGGGGTGCAGCTTCTGC
CAACAAGAGTCTTGAGTGTTTTAATCATGTTCTGATGTTAGATATGGCTCATAGTGTAGACACG
AGGTCTAAATAGACCCATTAGCCTTTTGCCCAGGTCTTCACACCAAGAGTTAGATTGACCAACC
AGGGCCCAGTATACTGGCCTTTCTTTCTGAGATCTTTGAGGGAGGACAGGGTGGGCAGGGACGT
GTTTCCTCAGCACCCTCTGGGGTAGGAACTGTGTCTGCTCTCATACTTGGCCTTTGAAGTGAAG
AGACTGGTCTGATGTGTGGGTCTCAGAAGCTCCGCAGGGCCCTACTTGCCATTGGATCCTGTCT
TTGCTGGTGGCCAGCAGCTTCAACAAAAGAGGATAAAACAGGACTTCTTCCACCTTTTCACTGG
CTGTGGCTCTCCCAATAAACTGTCTGTGGGAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NR_073087

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	33,016,762 - 33,027,407 (+)	NCBI
mRatBN7.2	15	29,046,802 - 29,057,446 (+)	NCBI
Rnor_6.0	15	34,233,862 - 34,244,507 (+)	NCBI
Rnor_5.0	15	38,124,048 - 38,134,707 (+)	NCBI
Celera	15	28,622,724 - 28,633,369 (+)	NCBI

Sequence:

show sequence

GCACTACGCAACCGGAAAGACTCCGTGGAGGGCCGCGACATTTAGGGAGCGTCTGCAAAGACCA
GGAAAGGAAGCCAGGGGTCGTCTAACAAGACCGCCGCGGGCCGCAGCCAATTCCAGTCCGCTAC
GACTTAACGCCCCCCCTTGGGTTAAGAAATTTCTCCAGCCCACCCATCAATCACCGGTCTCAGC
TGTCCAATCAGCGGACCAAGGGGGCGGAACATCGAGGAGCGTCGAGTGACGTCATCAGGCCTGG
CAGTCAGAGGCGTGACGGACGAGGCTCGCGACTTAGGAGCTGTTAGCCGGCGCGGCAGCGGTAG
GCAGTGTAAACAGGGCCTCGCCCCTGCGGGTCCTGCGACGGCTCCTGGCTGGATTGAGGAAGGT
TTATGTTCCCGAAACCTTGGGAGCTGTCATAGCTAAAGAGAAGGAAATCTCAGTCTCCTAGAGG
GGTCACCCCTCTAAAGATAGCTTCTGCCCCGTTTCTGGAAACCCTGATATTTCTAGAGCAGGAT
TTGCTTTCACCAAACCCAATTTGGAGACAGGAGAAGTCCCTGCACAGGATATAAGGATGCTGTA
ACCAGAACATGGGATCACGGAACAGCAGCAGCGCAGGATCCGGGTCCTTAGAACCCTCCGAGGG
CTTGTCCCGAAGAGGGGCTGGCCTGCGTCGTAGTGAGGAAGAAGAAGAAGAGGATGAAGATGTG
GATCTGGCCCAGAGGCCAAGTGAGGTTGGTGCAAGGTGGAGGTGCAGCAAATTTACAACTCATC
CAGGCCCTCTCAGACTCAGAGGAAGAGCATGACAGTGCCTGGGACGGTCGCCTTGGAGATCGAT
ACAACCCACCTGTGGATGCAACCCCTGACACCCGGGAGCTGGAGTACAATGAGATCAAAACTCG
GGTGGAATTGGCCACGGGGCGGCTAGGACTCGGGAGGACTGCTCAGGAGCATAGCTTCCCTCGA
ATGCTACACCAGAGAGAACGGGGCCTCTGCCACCGGGGAAGCTTCTCCCTTGGAGAACAGTCTC
GAGTGATGTCTCACTTCTTGCCCAATGATCTAAGCTTCACTGATACCTACTCTCAGAAGGCTTT
CTGTGGCATCTACAGCAAAGATGGTCAAATCTTCATGTCCGCTTGCCAAGATCAAACAATCCGA
CTGTACGACTGTCGGTATGGCCGCTTCCACAAGTTTAAAAGCATCAAGGCCCGGGATGTAGGCT
GGAGTGTCCTGGATGTGGCCTTCACTCCTGATGGAAACCACTTCCTGTACTCCAGCTGGTCTGA
CTACATTCATATCTGCAGCATCTATGGGGAAGGAGACACACACACTGCCCTGGATTTAAGGCCA
GATGAACGTCGCTTTGCTGTCTTTTCCATTGCTGTCTCCTCAGATGGACGAGAAGTACTAGGAG
GAGCCAATGATGGCTGCCTTTATGTCTTTGACCGTGAACAAAACCGGCGTACTCTTCAGATTGA
GTCTCATGAGGATGATGTGAATGCAGTGGCCTTTGCTGACATAAGCTCCCAGATCCTGTTCTCT
GGGGGAGACGATGCCATCTGCAAAGTGTGGGACCGACGCACCATGCGGGAGGATGACCCCAAGC
CTGTGGGGGCACTGGCTGGCCACCAGGATGGCATCACCTTCATTGACAGCAAGGGTGATGCCCG
GTATCTCATCTCCAACTCCAAAGATCAGACCATTAAGCTCTGGGATATCAGACGCTTTTCCAGC
CGAGAAGGCATGGAAGCGTCACGACTGGCTGCCACACAGCAGAACTGGGACTATCGCTGGCAGC
AGGTGCCCAAGAAAGCCTGGAAGAAGTTGAAGCTCCCAGGTGACAGCTCCTTGATGACCTACAG
AGGCCATGGAGTGCTTCACACTCTGATCCGATGCCGATTCTCCCCAGCCCACAGCACGGGCCAG
CAGTTCATCTACAGCGGCTGTTCTACTGGCAAAGTGGTTGTATATGACCTCTTAAGCGGCCACA
TTGTGAAGAAGCTGACCAATCACAAGGCCTGTGTGCGTGATGTCAGTTGGCATCCCTTTGAAGA
AAAGATTGTCAGCAGTTCGTGGGATGGGAGCCTACGCCTGTGGCAGTACCGCCAAGCTGAGTAC
TTCCAGGATGACATGACCGAGTCTGACAGGAACAGAGTCTGTTCCAGTGGCCCTGCTCCGGTGC
CCTGCCCATCTGTGGCCTTTTCCTCACCTCAGTAGATCTGACCTCCAGTTCTGTGTAGGGTGAA
TTCTCAGCATATTCTCTGCCTCCTCCTTCCTTTCCCCATTTGGGGAGTAAGTGGAAGAACTGCT
GACACTGGGTAGTGAGAGACAGAAACCCAGAGTCTGGGCCCAGGCTGAGCCTGGACTACCCGTC
CCCAAACTGGGCCAAGTGGTTTCCTCATGCATTCATACCCAGTCTGCTTGGATTTCTATCTCTA
GCCAGAATGTGGCCGGACATCCATTATCTGGGGTGCAGCTTCTGCCAACAAGAGTCTTGAGTGT
TTTAATCATGTTCTGATGTTAGATATGGCTCATAGTGTAGACACGAGGTCTAAATAGACCCATT
AGCCTTTTGCCCAGGTCTTCACACCAAGAGTTAGATTGACCAACCAGGGCCCAGTATACTGGCC
TTTCTTTCTGAGATCTTTGAGGGAGGACAGGGTGGGCAGGGACGTGTTTCCTCAGCACCCTCTG
GGGTAGGAACTGTGTCTGCTCTCATACTTGGCCTTTGAAGTGAAGAGACTGGTCTGATGTGTGG
GTCTCAGAAGCTCCGCAGGGCCCTACTTGCCATTGGATCCTGTCTTTGCTGGTGGCCAGCAGCT
TCAACAAAAGAGGATAAAACAGGACTTCTTCCACCTTTTCACTGGCTGTGGCTCTCCCAATAAA
CTGTCTGTGGGAAA

hide sequence

RefSeq Acc Id:

NR_073088

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	33,016,762 - 33,027,407 (+)	NCBI
mRatBN7.2	15	29,046,802 - 29,057,446 (+)	NCBI
Rnor_6.0	15	34,233,862 - 34,244,507 (+)	NCBI
Rnor_5.0	15	38,124,048 - 38,134,707 (+)	NCBI
Celera	15	28,622,724 - 28,633,369 (+)	NCBI

Sequence:

show sequence

GCACTACGCAACCGGAAAGACTCCGTGGAGGGCCGCGACATTTAGGGAGCGTCTGCAAAGACCA
GGAAAGGAAGCCAGGGGTCGTCTAACAAGACCGCCGCGGGCCGCAGCCAATTCCAGTCCGCTAC
GACTTAACGCCCCCCCTTGGGTTAAGAAATTTCTCCAGCCCACCCATCAATCACCGGTCTCAGC
TGTCCAATCAGCGGACCAAGGGGGCGGAACATCGAGGAGCGTCGAGTGACGTCATCAGGCCTGG
CAGTCAGAGGCGTGACGGACGAGGCTCGCGACTTAGGAGCTGTTAGCCGGCGCGGCAGCGGTAG
GCAGTGTAAACAGGGCCTCGCCCCTGCGGGTCCTGCGACGGCTCCTGGCTGACAGGAGAAGTCC
CTGCACAGGATATAAGGATGCTGTAACCAGAACATGGGATCACGGAACAGCAGCAGCGCAGGAT
CCGGGTCCTTAGAACCCTCCGAGGGCTTGTCCCGAAGAGGGGCTGGCCTGCGTCGTAGTGAGGA
AGAAGAAGAAGAGGATGAAGATGTGGATCTGGCCCAGGTACTGGCCTATCTCCTCCGCAGAGGC
CAAGTGAGGTTGGTGCAAGGTGGAGGTGCAGCAAATTTACAACTCATCCAGGCCCTCTCAGACT
CAGAGGAAGAGCATGACAGTGCCTGGGACGGTCGCCTTGGAGATCGATACAACCCACCTGTGGA
TGCAACCCCTGACACCCGGGAGCTGGAGTACAATGAGATCAAAACTCGGGTGGAATTGGCCACG
GGGCGGCTAGGACTCGGGAGGACTGCTCAGGAGCATAGCTTCCCTCGAATGCTACACCAGAGAG
AACGGGGCCTCTGCCACCGGGGAAGCTTCTCCCTTGGAGAACAGTCTCGAGTGATGTCTCACTT
CTTGCCCAATGATCTAAGCTTCACTGATACCTACTCTCAGAAGGCTTTCTGTGGCATCTACAGC
AAAGATGGTCAAATCTTCATGTCCGCTTGCCAAGATCAAACAATCCGACTGTACGACTGTCGGT
ATGGCCGCTTCCACAAGTTTAAAAGCATCAAGGCCCGGGATGTAGGCTGGAGTGTCCTGGATGT
GGCCTTCACTCCTGATGGAAACCACTTCCTGTACTCCAGCTGGTCTGACTACAAGACTTCTCCA
AGAAGGCTTTCCAGGAGTGCCTCTTGAGCTGAGCTCCCACCCAGATGAACAAGTACACCGCTTG
CAATTTCTCTGTGTGGCTTCCTGAGAGCACTACCCATCCTGCCAGATGAACGTCGCTTTGCTGT
CTTTTCCATTGCTGTCTCCTCAGATGGACGAGAAGTACTAGGAGGAGCCAATGATGGCTGCCTT
TATGTCTTTGACCGTGAACAAAACCGGCGTACTCTTCAGATTGAGTCTCATGAGGATGATGTGA
ATGCAGTGGCCTTTGCTGACATAAGCTCCCAGATCCTGTTCTCTGGGGGAGACGATGCCATCTG
CAAAGTGTGGGACCGACGCACCATGCGGGAGGATGACCCCAAGCCTGTGGGGGCACTGGCTGGC
CACCAGGATGGCATCACCTTCATTGACAGCAAGGGTGATGCCCGGTATCTCATCTCCAACTCCA
AAGATCAGACCATTAAGCTCTGGGATATCAGACGCTTTTCCAGCCGAGAAGGCATGGAAGCGTC
ACGACTGGCTGCCACACAGCAGAACTGGGACTATCGCTGGCAGCAGGTGCCCAAGAAAGCCTGG
AAGAAGTTGAAGCTCCCAGGTGACAGCTCCTTGATGACCTACAGAGGCCATGGAGTGCTTCACA
CTCTGATCCGATGCCGATTCTCCCCAGCCCACAGCACGGGCCAGCAGTTCATCTACAGCGGCTG
TTCTACTGGCAAAGTGGTTGTATATGACCTCTTAAGCGGCCACATTGTGAAGAAGCTGACCAAT
CACAAGGCCTGTGTGCGTGATGTCAGTTGGCATCCCTTTGAAGAAAAGATTGTCAGCAGTTCGT
GGGATGGGAGCCTACGCCTGTGGCAGTACCGCCAAGCTGAGTACTTCCAGGATGACATGACCGA
GTCTGACAGGAACAGAGTCTGTTCCAGTGGCCCTGCTCCGGTGCCCTGCCCATCTGTGGCCTTT
TCCTCACCTCAGTAGATCTGACCTCCAGTTCTGTGTAGGGTGAATTCTCAGCATATTCTCTGCC
TCCTCCTTCCTTTCCCCATTTGGGGAGTAAGTGGAAGAACTGCTGACACTGGGTAGTGAGAGAC
AGAAACCCAGAGTCTGGGCCCAGGCTGAGCCTGGACTACCCGTCCCCAAACTGGGCCAAGTGGT
TTCCTCATGCATTCATACCCAGTCTGCTTGGATTTCTATCTCTAGCCAGAATGTGGCCGGACAT
CCATTATCTGGGGTGCAGCTTCTGCCAACAAGAGTCTTGAGTGTTTTAATCATGTTCTGATGTT
AGATATGGCTCATAGTGTAGACACGAGGTCTAAATAGACCCATTAGCCTTTTGCCCAGGTCTTC
ACACCAAGAGTTAGATTGACCAACCAGGGCCCAGTATACTGGCCTTTCTTTCTGAGATCTTTGA
GGGAGGACAGGGTGGGCAGGGACGTGTTTCCTCAGCACCCTCTGGGGTAGGAACTGTGTCTGCT
CTCATACTTGGCCTTTGAAGTGAAGAGACTGGTCTGATGTGTGGGTCTCAGAAGCTCCGCAGGG
CCCTACTTGCCATTGGATCCTGTCTTTGCTGGTGGCCAGCAGCTTCAACAAAAGAGGATAAAAC
AGGACTTCTTCCACCTTTTCACTGGCTGTGGCTCTCCCAATAAACTGTCTGTGGGAAA

hide sequence

RefSeq Acc Id:

XM_006251971 ⟹ XP_006252033

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	33,015,370 - 33,027,407 (+)	NCBI
mRatBN7.2	15	29,046,744 - 29,057,450 (+)	NCBI
Rnor_6.0	15	34,233,840 - 34,244,512 (+)	NCBI
Rnor_5.0	15	38,124,048 - 38,134,707 (+)	NCBI

Sequence:

show sequence

CCCAGACCCAGGGAGCGCGTGCGCACTACGCAACCGGAAAGACTCCGTGGAGGGCCGCGACATT
TAGGGAGCGTCTGCAAAGACCAGGAAAGGAAGCCAGGGGTCGTCTAACAAGACCGCCGCGGGCC
GCAGCCAATTCCAGTCCGCTACGACTTAACGCCCCCCCTTGGGTTAAGAAATTTCTCCAGCCCA
CCCATCAATCACCGGTCTCAGCTGTCCAATCAGCGGACCAAGGGGGCGGAACATCGAGGAGCGT
CGAGTGACGTCATCAGGCCTGGCAGTCAGAGGCGTGACGGACGAGGCTCGCGACTTAGGAGCTG
TTAGCCGGCGCGGCAGCGGTAGGCAGTGTAAACAGGGCCTCGCCCCTGCGGGTCCTGCGACGGC
TCCTGGCTGGATTGAGGAAGGTTTATGTTCCCGAAACCTTGGGAGCTGTCATAGCTAAAGAGAA
GGAAATCTCAGTCTCCTAGAGGGGTCACCCCTCTAAAGATAGCTTCTGCCCCGTTTCTGGAAAC
CCTGATATTTCTAGAGCAGGATTTGCTTTCACCAAACCCAATTTGGAGACAGGAGAAGTCCCTG
CACAGGATATAAGGATGCTGTAACCAGAACATGGGATCACGGAACAGCAGCAGCGCAGGATCCG
GGTCCTTAGAACCCTCCGAGGGCTTGTCCCGAAGAGGGGCTGGCCTGCGTCGTAGTGAGGAAGA
AGAAGAAGAGGATGAAGATGTGGATCTGGCCCAGGTACTGGCCTATCTCCTCCGCAGAGGCCAA
GTGAGGTTGGTGCAAGGTGGAGGTGCAGCAAATTTACAACTCATCCAGGCCCTCTCAGACTCAG
AGGAAGAGCATGACAGTGCCTGGGACGGTCGCCTTGGAGATCGATACAACCCACCTGTGGATGC
AACCCCTGACACCCGGGAGCTGGAGTACAATGAGATCAAAACTCGGGTGGAATTGGCCACGGGG
CGGCTAGGACTCGGGAGGACTGCTCAGGAGCATAGCTTCCCTCGAATGCTACACCAGAGAGAAC
GGGGCCTCTGCCACCGGGGAAGCTTCTCCCTTGGAGAACAGTCTCGAGTGATGTCTCACTTCTT
GCCCAATGATCTAAGCTTCACTGATACCTACTCTCAGAAGGCTTTCTGTGGCATCTACAGCAAA
GATGGTCAAATCTTCATGTCCGCTTGCCAAGATCAAACAATCCGACTGTACGACTGTCGGTATG
GCCGCTTCCACAAGTTTAAAAGCATCAAGGCCCGGGATGTAGGCTGGAGTGTCCTGGATGTGGC
CTTCACTCCTGATGGAAACCACTTCCTGTACTCCAGCTGGTCTGACTACATTCATATCTGCAGC
ATCTATGGGGAAGGAGACACACACACTGCCCTGGATTTAAGGCCAGATGAACGTCGCTTTGCTG
TCTTTTCCATTGCTGTCTCCTCAGATGGACGAGAAGTACTAGGAGGAGCCAATGATGGCTGCCT
TTATGTCTTTGACCGTGAACAAAACCGGCGTACTCTTCAGATTGAGTCTCATGAGGATGATGTG
AATGCAGTGGCCTTTGCTGACATAAGCTCCCAGATCCTGTTCTCTGGGGGAGACGATGCCATCT
GCAAAGTGTGGGACCGACGCACCATGCGGGAGGATGACCCCAAGCCTGTGGGGGCACTGGCTGG
CCACCAGGATGGCATCACCTTCATTGACAGCAAGGGTGATGCCCGGTATCTCATCTCCAACTCC
AAAGATCAGACCATTAAGCTCTGGGATATCAGACGCTTTTCCAGCCGAGAAGGCATGGAAGCGT
CACGACTGGCTGCCACACAGCAGAACTGGGACTATCGCTGGCAGCAGGTGCCCAAGAAAGCCTG
GAAGAAGTTGAAGCTCCCAGGTGACAGCTCCTTGATGACCTACAGAGGCCATGGAGTGCTTCAC
ACTCTGATCCGATGCCGATTCTCCCCAGCCCACAGCACGGGCCAGCAGTTCATCTACAGCGGCT
GTTCTACTGGCAAAGTGGTTGTATATGACCTCTTAAGCGGCCACATTGTGAAGAAGCTGACCAA
TCACAAGGCCTGTGTGCGTGATGTCAGTTGGCATCCCTTTGAAGAAAAGATTGTCAGCAGTTCG
TGGGATGGGAGCCTACGCCTGTGGCAGTACCGCCAAGCTGAGTACTTCCAGGATGACATGACCG
AGTCTGACAGGAACAGAGTCTGTTCCAGTGGCCCTGCTCCGGTGCCCTGCCCATCTGTGGCCTT
TTCCTCACCTCAGTAGATCTGACCTCCAGTTCTGTGTAGGGTGAATTCTCAGCATATTCTCTGC
CTCCTCCTTCCTTTCCCCATTTGGGGAGTAAGTGGAAGAACTGCTGACACTGGGTAGTGAGAGA
CAGAAACCCAGAGTCTGGGCCCAGGCTGAGCCTGGACTACCCGTCCCCAAACTGGGCCAAGTGG
TTTCCTCATGCATTCATACCCAGTCTGCTTGGATTTCTATCTCTAGCCAGAATGTGGCCGGACA
TCCATTATCTGGGGTGCAGCTTCTGCCAACAAGAGTCTTGAGTGTTTTAATCATGTTCTGATGT
TAGATATGGCTCATAGTGTAGACACGAGGTCTAAATAGACCCATTAGCCTTTTGCCCAGGTCTT
CACACCAAGAGTTAGATTGACCAACCAGGGCCCAGTATACTGGCCTTTCTTTCTGAGATCTTTG
AGGGAGGACAGGGTGGGCAGGGACGTGTTTCCTCAGCACCCTCTGGGGTAGGAACTGTGTCTGC
TCTCATACTTGGCCTTTGAAGTGAAGAGACTGGTCTGATGTGTGGGTCTCAGAAGCTCCGCAGG
GCCCTACTTGCCATTGGATCCTGTCTTTGCTGGTGGCCAGCAGCTTCAACAAAAGAGGATAAAA
CAGGACTTCTTCCACCTTTTCACTGGCTGTGGCTCTCCCAATAAACTGTCTGTGGGAAACTGGC

hide sequence

RefSeq Acc Id:

XM_017599685 ⟹ XP_017455174

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	33,015,370 - 33,027,407 (+)	NCBI
mRatBN7.2	15	29,046,744 - 29,057,450 (+)	NCBI
Rnor_6.0	15	34,233,840 - 34,244,512 (+)	NCBI

Sequence:

show sequence

CCCAGACCCAGGGAGCGCGTGCGCACTACGCAACCGGAAAGACTCCGTGGAGGGCCGCGACATT
TAGGGAGCGTCTGCAAAGACCAGGAAAGGAAGCCAGGGGTCGTCTAACAAGACCGCCGCGGGCC
GCAGCCAATTCCAGTCCGCTACGACTTAACGCCCCCCCTTGGGTTAAGAAATTTCTCCAGCCCA
CCCATCAATCACCGGTCTCAGCTGTCCAATCAGCGGACCAAGGGGGCGGAACATCGAGGAGCGT
CGAGTGACGTCATCAGGCCTGGCAGTCAGAGGCGTGACGGACGAGGCTCGCGACTTAGGAGCTG
TTAGCCGGCGCGGCAGCGGTAGGCAGTGTAAACAGGGCCTCGCCCCTGCGGGTCCTGCGACGGC
TCCTGGCTGGTGAGTGACCTCGCGTGGGGCGGTAACCGCCAGACGCCGGGGGAGGTGCTTCTCC
ACTTTCCCTCCCCCTGTTGTACACACCCCCGGCGCACCACGTGGGTGTGAAGCTAAACTGGAGG
GGGTGTTAGGCTGACTTCTAACCTCATTGGCTGTTGCTGCTGCCGGCTCTCAAGAAATTGCTCT
GATTGGTCAGCAGAAGGGGGCGTCGGGGGTCTGAGTTCTAACGCTTCTGGTTGGTTGTGTGAGA
TAAGCTAGTGAAGTGCGTTCTTCCGCAAGGGGTTTTGATTGGTCAGTCGGAGAGGTTATCTGGG
ATTCGGCCACCCTGGGCCGGGGACTTTGATAGGATTGAGGAAGGTTTATGTTCCCGAAACCTTG
GGAGCTGTCATAGCTAAAGAGAAGGAAATCTCAGTCTCCTAGAGGGGTCACCCCTCTAAAGATA
GCTTCTGCCCCGTTTCTGGAAACCCTGATATTTCTAGAGCAGGATTTGCTTTCACCAAACCCAA
TTTGGAGACAGGAGAAGTCCCTGCACAGGATATAAGGATGCTGTAACCAGAACATGGGATCACG
GAACAGCAGCAGCGCAGGATCCGGGTCCTTAGAACCCTCCGAGGGCTTGTCCCGAAGAGGGGCT
GGCCTGCGTCGTAGTGAGGAAGAAGAAGAAGAGGATGAAGATGTGGATCTGGCCCAGGTACTGG
CCTATCTCCTCCGCAGAGGCCAAGTGAGGTTGGTGCAAGGTGGAGGTGCAGCAAATTTACAACT
CATCCAGGCCCTCTCAGACTCAGAGGAAGAGCATGACAGTGCCTGGGACGGTCGCCTTGGAGAT
CGATACAACCCACCTGTGGATGCAACCCCTGACACCCGGGAGCTGGAGTACAATGAGATCAAAA
CTCGGGTGGAATTGGCCACGGGGCGGCTAGGACTCGGGAGGACTGCTCAGGAGCATAGCTTCCC
TCGAATGCTACACCAGAGAGAACGGGGCCTCTGCCACCGGGGAAGCTTCTCCCTTGGAGAACAG
TCTCGAGTGATGTCTCACTTCTTGCCCAATGATCTAAGCTTCACTGATACCTACTCTCAGAAGG
CTTTCTGTGGCATCTACAGCAAAGATGGTCAAATCTTCATGTCCGCTTGCCAAGATCAAACAAT
CCGACTGTACGACTGTCGGTATGGCCGCTTCCACAAGTTTAAAAGCATCAAGGCCCGGGATGTA
GGCTGGAGTGTCCTGGATGTGGCCTTCACTCCTGATGGAAACCACTTCCTGTACTCCAGCTGGT
CTGACTACATTCATATCTGCAGCATCTATGGGGAAGGAGACACACACACTGCCCTGGATTTAAG
GCCAGATGAACGTCGCTTTGCTGTCTTTTCCATTGCTGTCTCCTCAGATGGACGAGAAGTACTA
GGAGGAGCCAATGATGGCTGCCTTTATGTCTTTGACCGTGAACAAAACCGGCGTACTCTTCAGA
TTGAGTCTCATGAGGATGATGTGAATGCAGTGGCCTTTGCTGACATAAGCTCCCAGATCCTGTT
CTCTGGGGGAGACGATGCCATCTGCAAAGTGTGGGACCGACGCACCATGCGGGAGGATGACCCC
AAGCCTGTGGGGGCACTGGCTGGCCACCAGGATGGCATCACCTTCATTGACAGCAAGGGTGATG
CCCGGTATCTCATCTCCAACTCCAAAGATCAGACCATTAAGCTCTGGGATATCAGACGCTTTTC
CAGCCGAGAAGGCATGGAAGCGTCACGACTGGCTGCCACACAGCAGAACTGGGACTATCGCTGG
CAGCAGGTGCCCAAGAAAGCCTGGAAGAAGTTGAAGCTCCCAGGTGACAGCTCCTTGATGACCT
ACAGAGGCCATGGAGTGCTTCACACTCTGATCCGATGCCGATTCTCCCCAGCCCACAGCACGGG
CCAGCAGTTCATCTACAGCGGCTGTTCTACTGGCAAAGTGGTTGTATATGACCTCTTAAGCGGC
CACATTGTGAAGAAGCTGACCAATCACAAGGCCTGTGTGCGTGATGTCAGTTGGCATCCCTTTG
AAGAAAAGATTGTCAGCAGTTCGTGGGATGGGAGCCTACGCCTGTGGCAGTACCGCCAAGCTGA
GTACTTCCAGGATGACATGACCGAGTCTGACAGGAACAGAGTCTGTTCCAGTGGCCCTGCTCCG
GTGCCCTGCCCATCTGTGGCCTTTTCCTCACCTCAGTAGATCTGACCTCCAGTTCTGTGTAGGG
TGAATTCTCAGCATATTCTCTGCCTCCTCCTTCCTTTCCCCATTTGGGGAGTAAGTGGAAGAAC
TGCTGACACTGGGTAGTGAGAGACAGAAACCCAGAGTCTGGGCCCAGGCTGAGCCTGGACTACC
CGTCCCCAAACTGGGCCAAGTGGTTTCCTCATGCATTCATACCCAGTCTGCTTGGATTTCTATC
TCTAGCCAGAATGTGGCCGGACATCCATTATCTGGGGTGCAGCTTCTGCCAACAAGAGTCTTGA
GTGTTTTAATCATGTTCTGATGTTAGATATGGCTCATAGTGTAGACACGAGGTCTAAATAGACC
CATTAGCCTTTTGCCCAGGTCTTCACACCAAGAGTTAGATTGACCAACCAGGGCCCAGTATACT
GGCCTTTCTTTCTGAGATCTTTGAGGGAGGACAGGGTGGGCAGGGACGTGTTTCCTCAGCACCC
TCTGGGGTAGGAACTGTGTCTGCTCTCATACTTGGCCTTTGAAGTGAAGAGACTGGTCTGATGT
GTGGGTCTCAGAAGCTCCGCAGGGCCCTACTTGCCATTGGATCCTGTCTTTGCTGGTGGCCAGC
AGCTTCAACAAAAGAGGATAAAACAGGACTTCTTCCACCTTTTCACTGGCTGTGGCTCTCCCAA
TAAACTGTCTGTGGGAAACTGGC

hide sequence

RefSeq Acc Id:

XM_039093298 ⟹ XP_038949226

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	33,015,370 - 33,027,407 (+)	NCBI
mRatBN7.2	15	29,046,744 - 29,057,450 (+)	NCBI

RefSeq Acc Id:

XM_039093299 ⟹ XP_038949227

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	33,015,370 - 33,027,407 (+)	NCBI
mRatBN7.2	15	29,046,744 - 29,057,450 (+)	NCBI

RefSeq Acc Id:

XM_063274253 ⟹ XP_063130323

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	33,015,370 - 33,027,407 (+)	NCBI

RefSeq Acc Id:

XM_063274254 ⟹ XP_063130324

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	33,015,370 - 33,027,407 (+)	NCBI

RefSeq Acc Id:

XM_063274255 ⟹ XP_063130325

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	33,015,370 - 33,027,407 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001009686	(Get FASTA)	NCBI Sequence Viewer
	XP_006252033	(Get FASTA)	NCBI Sequence Viewer
	XP_017455174	(Get FASTA)	NCBI Sequence Viewer
	XP_038949226	(Get FASTA)	NCBI Sequence Viewer
	XP_038949227	(Get FASTA)	NCBI Sequence Viewer
	XP_063130323	(Get FASTA)	NCBI Sequence Viewer
	XP_063130324	(Get FASTA)	NCBI Sequence Viewer
	XP_063130325	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH87110	(Get FASTA)	NCBI Sequence Viewer
	AAH91364	(Get FASTA)	NCBI Sequence Viewer
	EDM14238	(Get FASTA)	NCBI Sequence Viewer
	EDM14239	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000074435
	ENSRNOP00000074435.1
GenBank Protein	Q5M9G8	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001009686 ⟸ NM_001009686

- UniProtKB:

Q5M9G8 (UniProtKB/Swiss-Prot), A6KH09 (UniProtKB/TrEMBL), A0A8L2QQZ0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGSRNSSSAGSGSLEPSEGLSRRGAGLRRSEEEEEEDEDVDLAQVLAYLLRRGQVRLVQGGGAA
NLQLIQALSDSEEEHDSAWDGRLGDRYNPPVDATPDTRELEYNEIKTRVELATGRLGLGRTAQE
HSFPRMLHQRERGLCHRGSFSLGEQSRVMSHFLPNDLSFTDTYSQKAFCGIYSKDGQIFMSACQ
DQTIRLYDCRYGRFHKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICSIYGEGDTHTA
LDLRPDERRFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRRTLQIESHEDDVNAVAFADISS
QILFSGGDDAICKVWDRRTMREDDPKPVGALAGHQDGITFIDSKGDARYLISNSKDQTIKLWDI
RRFSSREGMEASRLAATQQNWDYRWQQVPKKAWKKLKLPGDSSLMTYRGHGVLHTLIRCRFSPA
HSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGSLRLWQY
RQAEYFQDDMTESDRNRVCSSGPAPVPCPSVAFSSPQ

hide sequence

RefSeq Acc Id:	XP_006252033 ⟸ XM_006251971
- Peptide Label:	isoform X1
- UniProtKB:	Q5M9G8 (UniProtKB/Swiss-Prot), A6KH09 (UniProtKB/TrEMBL), A0A8L2QQZ0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGSRNSSSAGSGSLEPSEGLSRRGAGLRRSEEEEEEDEDVDLAQVLAYLLRRGQVRLVQGGGAA NLQLIQALSDSEEEHDSAWDGRLGDRYNPPVDATPDTRELEYNEIKTRVELATGRLGLGRTAQE HSFPRMLHQRERGLCHRGSFSLGEQSRVMSHFLPNDLSFTDTYSQKAFCGIYSKDGQIFMSACQ DQTIRLYDCRYGRFHKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICSIYGEGDTHTA LDLRPDERRFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRRTLQIESHEDDVNAVAFADISS QILFSGGDDAICKVWDRRTMREDDPKPVGALAGHQDGITFIDSKGDARYLISNSKDQTIKLWDI RRFSSREGMEASRLAATQQNWDYRWQQVPKKAWKKLKLPGDSSLMTYRGHGVLHTLIRCRFSPA HSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGSLRLWQY RQAEYFQDDMTESDRNRVCSSGPAPVPCPSVAFSSPQ hide sequence

RefSeq Acc Id:	XP_017455174 ⟸ XM_017599685
- Peptide Label:	isoform X1
- UniProtKB:	Q5M9G8 (UniProtKB/Swiss-Prot), A6KH09 (UniProtKB/TrEMBL), A0A8L2QQZ0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGSRNSSSAGSGSLEPSEGLSRRGAGLRRSEEEEEEDEDVDLAQVLAYLLRRGQVRLVQGGGAA NLQLIQALSDSEEEHDSAWDGRLGDRYNPPVDATPDTRELEYNEIKTRVELATGRLGLGRTAQE HSFPRMLHQRERGLCHRGSFSLGEQSRVMSHFLPNDLSFTDTYSQKAFCGIYSKDGQIFMSACQ DQTIRLYDCRYGRFHKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICSIYGEGDTHTA LDLRPDERRFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRRTLQIESHEDDVNAVAFADISS QILFSGGDDAICKVWDRRTMREDDPKPVGALAGHQDGITFIDSKGDARYLISNSKDQTIKLWDI RRFSSREGMEASRLAATQQNWDYRWQQVPKKAWKKLKLPGDSSLMTYRGHGVLHTLIRCRFSPA HSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGSLRLWQY RQAEYFQDDMTESDRNRVCSSGPAPVPCPSVAFSSPQ hide sequence

Ensembl Acc Id:

ENSRNOP00000056736 ⟸ ENSRNOT00000059987

Ensembl Acc Id:

ENSRNOP00000074435 ⟸ ENSRNOT00000077584

RefSeq Acc Id:	XP_038949226 ⟸ XM_039093298
- Peptide Label:	isoform X1
- UniProtKB:	Q5M9G8 (UniProtKB/Swiss-Prot), A6KH09 (UniProtKB/TrEMBL), A0A8L2QQZ0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038949227 ⟸ XM_039093299
- Peptide Label:	isoform X1
- UniProtKB:	Q5M9G8 (UniProtKB/Swiss-Prot), A6KH09 (UniProtKB/TrEMBL), A0A8L2QQZ0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063130323 ⟸ XM_063274253
- Peptide Label:	isoform X2
- UniProtKB:	A6KH10 (UniProtKB/TrEMBL), A0A8L2QQZ0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063130324 ⟸ XM_063274254
- Peptide Label:	isoform X2
- UniProtKB:	A6KH10 (UniProtKB/TrEMBL), A0A8L2QQZ0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063130325 ⟸ XM_063274255
- Peptide Label:	isoform X2
- UniProtKB:	A6KH10 (UniProtKB/TrEMBL), A0A8L2QQZ0 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5M9G8-F1-model_v2	AlphaFold	Q5M9G8	1-549	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13699670

Promoter ID:

EPDNEW_R10193

Type:

multiple initiation site

Name:

Dcaf11_1

Description:

DDB1 and CUL4 associated factor 11

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	15	34,234,791 - 34,234,851	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311288	AgrOrtholog
BioCyc Gene	G2FUF-13716	BioCyc
Ensembl Genes	ENSRNOG00000018825	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000077584	ENTREZGENE
	ENSRNOT00000077584.2	UniProtKB/Swiss-Prot
Gene3D-CATH	2.130.10.10	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7123958	IMAGE-MGC_LOAD
	IMAGE:7193336	IMAGE-MGC_LOAD
	IMAGE:7319156	IMAGE-MGC_LOAD
InterPro	DCAF	UniProtKB/Swiss-Prot
	DCAF11/LEC14B	UniProtKB/Swiss-Prot
	G-protein_beta_WD-40_rep	UniProtKB/Swiss-Prot
	WD40/YVTN_repeat-like_dom_sf	UniProtKB/Swiss-Prot
	WD40_repeat	UniProtKB/Swiss-Prot
	WD40_repeat_dom_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:305895	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:109419	IMAGE-MGC_LOAD
	MGC:94067	IMAGE-MGC_LOAD
	MGC:94719	IMAGE-MGC_LOAD
NCBI Gene	305895	ENTREZGENE
PANTHER	DDB1- AND CUL4-ASSOCIATED FACTOR 11	UniProtKB/Swiss-Prot
	DDB1- AND CUL4-ASSOCIATED FACTOR 11	UniProtKB/Swiss-Prot
Pfam	WD40	UniProtKB/Swiss-Prot
PhenoGen	Dcaf11	PhenoGen
PIRSF	WD_repeat_p23	UniProtKB/Swiss-Prot
PRINTS	GPROTEINBRPT	UniProtKB/Swiss-Prot
PROSITE	WD_REPEATS_2	UniProtKB/Swiss-Prot
	WD_REPEATS_REGION	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000018825	RatGTEx
SMART	WD40	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF50978	UniProtKB/Swiss-Prot
UniProt	A0A8L2QQZ0	ENTREZGENE, UniProtKB/TrEMBL
	A6KH09	ENTREZGENE, UniProtKB/TrEMBL
	A6KH10	ENTREZGENE, UniProtKB/TrEMBL
	DCA11_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2010-05-05	Dcaf11	DDB1 and CUL4 associated factor 11	Wdr23	WD repeat domain 23	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	Wdr23	WD repeat domain 23	Wdr23_predicted	WD repeat domain 23 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Wdr23_predicted	WD repeat domain 23 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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