Tyw5 (tRNA-yW synthesizing protein 5) - Rat Genome Database

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Gene: Tyw5 (tRNA-yW synthesizing protein 5) Rattus norvegicus
Analyze
Symbol: Tyw5
Name: tRNA-yW synthesizing protein 5
RGD ID: 1311269
Description: Predicted to enable several functions, including iron ion binding activity; protein homodimerization activity; and tRNA(Phe) (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity. Predicted to be involved in wybutosine biosynthetic process. Orthologous to human TYW5 (tRNA-yW synthesizing protein 5); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; benzo[a]pyrene; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C2orf60; hypothetical protein LOC301419; LOC301419; RGD1311269; similar to hypothetical protein FLJ37953; tRNA wybutosine-synthesizing protein 5; uncharacterized protein LOC301419
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8966,455,364 - 66,473,446 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl966,455,370 - 66,473,446 (-)EnsemblGRCr8
mRatBN7.2958,961,100 - 58,979,188 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl958,961,106 - 58,979,188 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx967,462,090 - 67,480,155 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0972,578,011 - 72,596,085 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0970,896,072 - 70,914,152 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0964,077,841 - 64,096,265 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl964,077,845 - 64,096,265 (-)Ensemblrn6Rnor6.0
Rnor_5.0963,883,688 - 63,901,784 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4956,283,826 - 56,302,571 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera956,407,437 - 56,425,095 (-)NCBICelera
RGSC_v3.1956,430,812 - 56,449,222 (-)NCBI
Cytogenetic Map9q31NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:12477932   PMID:20739293   PMID:20972222  


Genomics

Comparative Map Data
Tyw5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8966,455,364 - 66,473,446 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl966,455,370 - 66,473,446 (-)EnsemblGRCr8
mRatBN7.2958,961,100 - 58,979,188 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl958,961,106 - 58,979,188 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx967,462,090 - 67,480,155 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0972,578,011 - 72,596,085 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0970,896,072 - 70,914,152 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0964,077,841 - 64,096,265 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl964,077,845 - 64,096,265 (-)Ensemblrn6Rnor6.0
Rnor_5.0963,883,688 - 63,901,784 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4956,283,826 - 56,302,571 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera956,407,437 - 56,425,095 (-)NCBICelera
RGSC_v3.1956,430,812 - 56,449,222 (-)NCBI
Cytogenetic Map9q31NCBI
TYW5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382199,928,913 - 199,955,491 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2199,928,913 - 199,955,736 (-)Ensemblhg38GRCh38
GRCh372200,793,636 - 200,820,214 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362200,501,879 - 200,528,468 (-)NCBIBuild 36Build 36hg18NCBI36
Celera2194,548,334 - 194,575,163 (-)NCBICelera
Cytogenetic Map2q33.1NCBI
HuRef2192,646,316 - 192,673,173 (-)NCBIHuRef
CHM1_12200,799,759 - 200,826,590 (-)NCBICHM1_1
T2T-CHM13v2.02200,412,544 - 200,439,116 (-)NCBIT2T-CHM13v2.0
Tyw5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39157,427,394 - 57,445,833 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl157,427,396 - 57,446,260 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38157,388,235 - 57,406,674 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl157,388,237 - 57,407,101 (-)Ensemblmm10GRCm38
MGSCv37157,445,088 - 57,463,518 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36157,332,790 - 57,350,981 (-)NCBIMGSCv36mm8
Celera157,902,700 - 57,921,418 (-)NCBICelera
Cytogenetic Map1C1.3NCBI
cM Map128.78NCBI
Tyw5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554031,326,029 - 1,345,563 (+)Ensembl
ChiLan1.0NW_0049554031,326,027 - 1,351,039 (+)NCBIChiLan1.0ChiLan1.0
TYW5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213102,551,239 - 102,573,864 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B102,562,262 - 102,588,866 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B87,177,858 - 87,204,411 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B205,338,762 - 205,362,872 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B205,338,762 - 205,362,872 (-)EnsemblpanPan2panpan1.1
TYW5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1379,108,986 - 9,130,359 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl379,110,404 - 9,130,298 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha379,994,465 - 10,017,014 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0379,006,798 - 9,029,391 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl379,008,366 - 9,029,334 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1378,996,746 - 9,019,613 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0378,968,602 - 8,991,504 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0378,965,823 - 8,988,405 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Tyw5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303157,089,640 - 157,109,459 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936825918,327 - 936,666 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936825918,259 - 937,381 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TYW5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15103,556,155 - 103,578,816 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.115103,555,257 - 103,578,901 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215114,834,782 - 114,853,314 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TYW5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11085,429,009 - 85,455,300 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1085,433,166 - 85,455,035 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666040113,984,718 - 114,010,954 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tyw5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624889976,640 - 995,128 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_004624889976,570 - 995,128 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Tyw5
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v14132,242,199 - 132,260,048 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Tyw5
96 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:19
Count of miRNA genes:17
Interacting mature miRNAs:19
Transcripts:ENSRNOT00000013502
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)9671488884474983Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)956047863101047863Rat
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)94002992585029925Rat
1582203Gluco19Glucose level QTL 193.30.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)963376862108376862Rat
1300180Bw14Body weight QTL 143.776body mass (VT:0001259)body weight (CMO:0000012)93125043268875676Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)965657365108376720Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)94445825699506504Rat
61450Ciaa3CIA Autoantibody QTL 36.5blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)92956766474567664Rat
1598834Memor11Memory QTL 112.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)94445825685262605Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92956766483835942Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)94172029586720295Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)964220169109220169Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)964220169109220169Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)944458256121768150Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)964220169109220169Rat
1581517Bp284Blood pressure QTL 284arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)93922018684220186Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)948718864108376862Rat
1598849Memor17Memory QTL 172.2exploratory behavior trait (VT:0010471)difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)95746049778547958Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)94002992585029925Rat
1578757Pur6Proteinuria QTL 63.30.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)964220169109220169Rat
4889943Bss90Bone structure and strength QTL 904.1tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)95450650499506504Rat
1641894Alcrsp12Alcohol response QTL 12response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)93496059079960590Rat

Markers in Region
RH131338  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2958,961,237 - 58,961,450 (+)MAPPERmRatBN7.2
Rnor_6.0964,077,979 - 64,078,191NCBIRnor6.0
Rnor_5.0963,883,826 - 63,884,038UniSTSRnor5.0
RGSC_v3.4956,283,964 - 56,284,176UniSTSRGSC3.4
Celera956,407,575 - 56,407,787UniSTS
RH 3.4 Map9486.8UniSTS
Cytogenetic Map9q31UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000013502   ⟹   ENSRNOP00000013502
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl966,455,370 - 66,473,446 (-)Ensembl
mRatBN7.2 Ensembl958,961,106 - 58,979,188 (-)Ensembl
Rnor_6.0 Ensembl964,077,845 - 64,096,265 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000147066   ⟹   ENSRNOP00000103536
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl966,455,370 - 66,472,562 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000153755   ⟹   ENSRNOP00000099526
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl966,455,370 - 66,469,165 (-)Ensembl
RefSeq Acc Id: NM_001170473   ⟹   NP_001163944
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8966,455,364 - 66,473,446 (-)NCBI
mRatBN7.2958,961,100 - 58,979,188 (-)NCBI
Rnor_6.0964,077,841 - 64,096,265 (-)NCBI
Rnor_5.0963,883,688 - 63,901,784 (-)NCBI
RGSC_v3.4956,283,826 - 56,302,571 (-)RGD
Celera956,407,437 - 56,425,095 (-)RGD
Sequence:
RefSeq Acc Id: NR_033170
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8966,455,364 - 66,473,446 (-)NCBI
mRatBN7.2958,961,100 - 58,979,188 (-)NCBI
Rnor_6.0964,077,841 - 64,096,265 (-)NCBI
Rnor_5.0963,883,688 - 63,901,784 (-)NCBI
Celera956,407,437 - 56,425,095 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006244910   ⟹   XP_006244972
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8966,455,364 - 66,473,234 (-)NCBI
mRatBN7.2958,961,100 - 58,978,976 (-)NCBI
Rnor_6.0964,077,841 - 64,096,011 (-)NCBI
Rnor_5.0963,883,688 - 63,901,784 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017596356   ⟹   XP_017451845
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8966,455,364 - 66,471,117 (-)NCBI
mRatBN7.2958,961,100 - 58,976,263 (-)NCBI
Rnor_6.0964,077,841 - 64,092,873 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017596357   ⟹   XP_017451846
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8966,455,364 - 66,472,997 (-)NCBI
mRatBN7.2958,961,100 - 58,978,724 (-)NCBI
Rnor_6.0964,077,841 - 64,095,746 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039083298   ⟹   XP_038939226
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8966,455,364 - 66,473,234 (-)NCBI
mRatBN7.2958,961,459 - 58,978,976 (-)NCBI
RefSeq Acc Id: XM_039083299   ⟹   XP_038939227
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8966,455,364 - 66,464,103 (-)NCBI
mRatBN7.2958,961,100 - 58,969,842 (-)NCBI
RefSeq Acc Id: XM_063266942   ⟹   XP_063123012
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8966,455,364 - 66,472,997 (-)NCBI
RefSeq Acc Id: NP_001163944   ⟸   NM_001170473
- UniProtKB: D3ZY75 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006244972   ⟸   XM_006244910
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017451846   ⟸   XM_017596357
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_017451845   ⟸   XM_017596356
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSRNOP00000013502   ⟸   ENSRNOT00000013502
RefSeq Acc Id: XP_038939227   ⟸   XM_039083299
- Peptide Label: isoform X5
- UniProtKB: A6IP36 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038939226   ⟸   XM_039083298
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063123012   ⟸   XM_063266942
- Peptide Label: isoform X5
- UniProtKB: A6IP36 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000099526   ⟸   ENSRNOT00000153755
Ensembl Acc Id: ENSRNOP00000103536   ⟸   ENSRNOT00000147066
Protein Domains
JmjC

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZY75-F1-model_v2 AlphaFold D3ZY75 1-315 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696675
Promoter ID:EPDNEW_R7200
Type:initiation region
Name:Tyw5_1
Description:tRNA-yW synthesizing protein 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0964,096,184 - 64,096,244EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311269 AgrOrtholog
BioCyc Gene G2FUF-27485 BioCyc
Ensembl Genes ENSRNOG00000010100 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000013502 ENTREZGENE
  ENSRNOT00000013502.8 UniProtKB/TrEMBL
  ENSRNOT00000147066 ENTREZGENE
  ENSRNOT00000147066.1 UniProtKB/TrEMBL
  ENSRNOT00000153755 ENTREZGENE
  ENSRNOT00000153755.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.1470 UniProtKB/TrEMBL
  Cupin UniProtKB/TrEMBL
InterPro Cupin_8 UniProtKB/TrEMBL
  TF_JmjC_AAH UniProtKB/TrEMBL
KEGG Report rno:301419 UniProtKB/TrEMBL
NCBI Gene 301419 ENTREZGENE
PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED UniProtKB/TrEMBL
  TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 5 UniProtKB/TrEMBL
Pfam Cupin_8 UniProtKB/TrEMBL
PhenoGen Tyw5 PhenoGen
PROSITE JMJC UniProtKB/TrEMBL
RatGTEx ENSRNOG00000010100 RatGTEx
SMART JmjC UniProtKB/TrEMBL
Superfamily-SCOP Clavaminate synthase-like UniProtKB/TrEMBL
UniProt A0ABK0L9C9_RAT UniProtKB/TrEMBL
  A0ABK0LE00_RAT UniProtKB/TrEMBL
  A6IP36 ENTREZGENE, UniProtKB/TrEMBL
  D3ZY75 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-05-25 Tyw5  tRNA-yW synthesizing protein 5  RGD1311269  similar to hypothetical protein FLJ37953  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1311269  similar to hypothetical protein FLJ37953   RGD1311269_predicted  similar to hypothetical protein FLJ37953 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-20 RGD1311269_predicted  similar to hypothetical protein FLJ37953 (predicted)  LOC301419_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC301419_predicted  similar to hypothetical protein FLJ37953 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL