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Gene: Rbfox1 (RNA binding fox-1 homolog 1) Rattus norvegicus

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Symbol:

Rbfox1

Name:

RNA binding fox-1 homolog 1

RGD ID:

1311210

Description:

Predicted to enable mRNA 3'-UTR binding activity. Predicted to be involved in nervous system development and regulation of alternative mRNA splicing, via spliceosome. Predicted to act upstream of or within neuromuscular process controlling balance and regulation of skeletal muscle cell differentiation. Predicted to be located in cytoplasmic stress granule; nuclear stress granule; and trans-Golgi network. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in alcohol use disorder. Orthologous to human RBFOX1 (RNA binding fox-1 homolog 1); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

A2bp1; ataxin 2 binding protein 1; bol, boule-like (Drosophila); Boll; fox-1 homolog A; LOC302920; RNA binding protein fox-1 homolog 1; RNA binding protein, fox-1 homolog (C. elegans) 1; RNA binding protein, fox-1 homolog 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RBFOX1 (RNA binding fox-1 homolog 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Rbfox1 (RNA binding protein, fox-1 homolog (C. elegans) 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rbfox1 (RNA binding fox-1 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RBFOX1 (RNA binding fox-1 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RBFOX1 (RNA binding fox-1 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rbfox1 (RNA binding fox-1 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RBFOX1 (RNA binding fox-1 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RBFOX1 (RNA binding fox-1 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rbfox1 (RNA binding fox-1 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Rbfox1 (RNA binding fox-1 homolog 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	RBFOX1 (RNA binding fox-1 homolog 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rbfox1 (RNA binding protein, fox-1 homolog (C. elegans) 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rbfox1 (RNA binding fox-1 homolog 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	asd-1	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	asd-1	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Rbfox1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER)
Drosophila melanogaster (fruit fly):	Rbfox1	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	fox-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	fox-1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rbfox1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	8,658,809 - 10,754,648 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	8,658,809 - 10,754,706 (-)	Ensembl				GRCr8
mRatBN7.2	10	8,152,198 - 10,248,120 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	8,152,198 - 9,686,659 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	12,854,706 - 13,195,257 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	12,345,337 - 12,686,155 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	8,002,626 - 8,343,153 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	8,312,961 - 10,437,778 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	8,312,961 - 8,654,892 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	7,109,396 - 7,482,255 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	8,213,474 - 8,561,580 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	7,132,939 - 7,472,569 (-)	NCBI		Celera
RGSC_v3.1	10	8,216,011 - 8,561,515 (-)	NCBI
Cytogenetic Map	10	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

alcohol use disorder (ISO)

autism spectrum disorder (ISO)

autistic disorder (ISO)

benign epilepsy with centrotemporal spikes (ISO)

colorectal cancer (ISO)

dilated cardiomyopathy (ISO)

generalized epilepsy (ISO)

genetic disease (ISO)

Idiopathic Generalized Epilepsy (ISO)

intellectual disability (ISO)

myoclonic-atonic epilepsy (ISO)

schizophrenia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1-naphthyl isothiocyanate (EXP)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-Zearalanol (EXP)

amitrole (EXP)

atrazine (EXP)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

CGP 52608 (ISO)

Cuprizon (EXP)

dibutyl phthalate (ISO)

dieldrin (ISO)

diisononyl phthalate (ISO)

dioxygen (EXP)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (EXP)

enzyme inhibitor (ISO)

ethanol (ISO)

gentamycin (EXP)

glyphosate (EXP)

kainic acid (ISO)

lead diacetate (ISO)

lead(0) (ISO)

methoxychlor (EXP)

methylphenidate (ISO)

N,N-diethyl-m-toluamide (EXP)

ozone (ISO)

panobinostat (ISO)

paracetamol (EXP)

perfluorooctanoic acid (EXP)

permethrin (EXP)

phenylmercury acetate (ISO)

SB 431542 (ISO)

serpentine asbestos (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

succimer (ISO)

sunitinib (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

triticonazole (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mRNA processing (IEA)

nervous system development (IEA)

neuromuscular process controlling balance (ISO)

regulation of alternative mRNA splicing, via spliceosome (IEA,ISO)

regulation of RNA splicing (IEA)

regulation of skeletal muscle cell differentiation (ISO)

RNA splicing (IEA)

Cellular Component

cytoplasm (IEA,ISO)

cytoplasmic stress granule (IEA,ISO)

nuclear stress granule (IEA,ISO)

nucleoplasm (IEA,ISO)

nucleus (IEA,ISO)

trans-Golgi network (IEA,ISO)

Molecular Function

mRNA 3'-UTR binding (ISO)

nucleic acid binding (IEA)

protein binding (ISO)

RNA binding (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Variants of the Aggression-Related RBFOX1 Gene in a Population Representative Birth Cohort Study: Aggressiveness, Personality, and Alcohol Use Disorder.	Vaht M, etal., Front Psychiatry. 2020 Nov 24;11:501847. doi: 10.3389/fpsyt.2020.501847. eCollection 2020.
6.	Characterization of CaV1.2 exon 33 heterozygous knockout mice and negative correlation between Rbfox1 and CaV1.2 exon 33 expressions in human heart failure.	Wang J, etal., Channels (Austin). 2018 Jan 1;12(1):51-57. doi: 10.1080/19336950.2017.1381805.

Additional References at PubMed

PMID:10814712	PMID:20724578	PMID:21177649	PMID:22357600	PMID:23300487	PMID:23349951	PMID:23918472	PMID:27378374	PMID:29358748	PMID:32248729

Genomics

Comparative Map Data

Rbfox1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	8,658,809 - 10,754,648 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	8,658,809 - 10,754,706 (-)	Ensembl				GRCr8
mRatBN7.2	10	8,152,198 - 10,248,120 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	8,152,198 - 9,686,659 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	12,854,706 - 13,195,257 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	12,345,337 - 12,686,155 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	8,002,626 - 8,343,153 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	8,312,961 - 10,437,778 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	8,312,961 - 8,654,892 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	7,109,396 - 7,482,255 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	8,213,474 - 8,561,580 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	7,132,939 - 7,472,569 (-)	NCBI		Celera
RGSC_v3.1	10	8,216,011 - 8,561,515 (-)	NCBI
Cytogenetic Map	10	q12	NCBI

RBFOX1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	5,239,721 - 7,713,340 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	5,239,802 - 7,713,340 (+)	Ensembl			hg38	GRCh38
GRCh37	16	5,289,722 - 7,763,342 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	6,009,133 - 7,702,500 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	16	6,278,710 - 7,977,033 (+)	NCBI		Celera
Cytogenetic Map	16	p13.3	NCBI
HuRef	16	6,033,145 - 7,728,991 (+)	NCBI		HuRef
CHM1_1	16	6,071,131 - 7,764,167 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	5,269,380 - 7,744,948 (+)	NCBI		T2T-CHM13v2.0

Rbfox1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	5,702,566 - 7,230,344 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	5,124,665 - 7,229,391 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	16	5,884,793 - 7,412,480 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	5,885,355 - 7,411,526 (+)	Ensembl			mm10	GRCm38
MGSCv37	16	5,884,886 - 7,412,573 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	16	5,800,319 - 7,326,847 (+)	NCBI		MGSCv36	mm8
Celera	16	6,516,973 - 8,058,700 (+)	NCBI		Celera
Cytogenetic Map	16	A1	NCBI
cM Map	16	3.34	NCBI

Rbfox1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955442	10,344,365 - 10,908,434 (-)	Ensembl
ChiLan1.0	NW_004955442	10,345,261 - 10,694,602 (-)	NCBI	ChiLan1.0	ChiLan1.0

RBFOX1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	5,767,287 - 8,246,570 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	9,557,393 - 12,037,776 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	4,162,659 - 6,640,962 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	5,415,947 - 7,889,215 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	5,418,607 - 7,889,215 (+)	Ensembl			panPan2	panpan1.1

RBFOX1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	34,218,276 - 36,255,529 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	34,220,648 - 36,255,384 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	35,609,952 - 37,647,214 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	34,421,178 - 36,456,830 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	34,422,071 - 36,456,879 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	34,218,561 - 36,256,306 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	34,090,868 - 36,147,046 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	34,513,003 - 36,547,216 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Rbfox1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	107,414,183 - 108,998,589 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936530	6,306,877 - 6,845,073 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936530	5,259,612 - 6,843,668 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RBFOX1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	34,939,573 - 37,300,810 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	3	34,938,703 - 37,209,772 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	35,870,791 - 36,254,430 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RBFOX1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	4,896,225 - 7,365,137 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666068	22,855,140 - 25,753,876 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rbfox1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624824	4,550,670 - 5,113,842 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624824	2,997,980 - 5,113,744 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Rbfox1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	9	14,515,133 - 16,036,348 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Rbfox1
14694 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	480
Count of miRNA genes:	246
Interacting mature miRNAs:	332
Transcripts:	ENSRNOT00000066534
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2313095	Bss62	Bone structure and strength QTL 62	1.5	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	10	5893811	50893811	Rat
631660	Hcar1	Hepatocarcinoma resistance QTL 1	3.4	0.0001	liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	10	6661118	35509383	Rat
8662860	Vetf10	Vascular elastic tissue fragility QTL 10			artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	10	6660923	73950353	Rat
2313066	Bss63	Bone structure and strength QTL 63	1.4	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	10	5893811	50893811	Rat
631554	Bp133	Blood pressure QTL 133		0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	1250554	64349221	Rat
2313064	Bmd71	Bone mineral density QTL 71	0.9	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	10	5893811	50893811	Rat
1578761	Stresp21	Stress response QTL 21	3.3		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	10	6877142	51877142	Rat
2293680	Bss40	Bone structure and strength QTL 40	5.66	0.0001	femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	10	1	35730538	Rat
7387235	Uae41	Urinary albumin excretion QTL 41	5.26	0.1874	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	10	1	30004247	Rat
2313104	Bss61	Bone structure and strength QTL 61	0.9	0.0001	tibia area (VT:1000281)	tibia midshaft cross-sectional area (CMO:0001717)	10	5893811	50893811	Rat
61427	Cia16	Collagen induced arthritis QTL 16	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	6864618	96620484	Rat
10401803	Kidm50	Kidney mass QTL 50			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	10	922197	45922197	Rat
2317754	Glom25	Glomerulus QTL 25	3.5		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	10	2103708	47103708	Rat
2313081	Bss64	Bone structure and strength QTL 64	1.3	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	10	5893811	50893811	Rat
631828	Alc5	Alcohol consumption QTL 5	2.4		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	10	1	17749933	Rat
634327	Hc4	Hypercalciuria QTL 4	2.4		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	10	1	38832698	Rat

Markers in Region

D10Got16

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	8,284,055 - 8,284,301 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	8,443,686 - 8,443,931	NCBI	Rnor6.0
Rnor_5.0	10	7,240,984 - 7,241,229	UniSTS	Rnor5.0
RGSC_v3.4	10	8,348,123 - 8,348,369	RGD	RGSC3.4
RGSC_v3.4	10	8,348,124 - 8,348,369	UniSTS	RGSC3.4
Celera	10	7,264,192 - 7,264,437	UniSTS
RGSC_v3.1	10	8,348,123 - 8,348,369	RGD
RH 2.0 Map	10	0.0	RGD
Cytogenetic Map	10	q12	UniSTS

D10Got19

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	10	8,858,188 - 8,858,307	NCBI	Rnor6.0
Rnor_5.0	10	7,647,226 - 7,647,345	UniSTS	Rnor5.0
RGSC_v3.4	10	8,773,227 - 8,773,346	RGD	RGSC3.4
RGSC_v3.4	10	8,773,228 - 8,773,347	UniSTS	RGSC3.4
Celera	10	7,667,598 - 7,667,717	UniSTS
RGSC_v3.1	10	8,773,227 - 8,773,346	RGD
RH 3.4 Map	10	101.33	UniSTS
RH 3.4 Map	10	101.33	RGD
RH 2.0 Map	10	0.0	RGD
Cytogenetic Map	10	q12	UniSTS

AU048802

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	10	8,748,886 - 8,749,017 (+)	Marker Load Pipeline
mRatBN7.2	10	8,242,280 - 8,242,411 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	8,401,957 - 8,402,087	NCBI	Rnor6.0
Rnor_5.0	10	7,199,255 - 7,199,385	UniSTS	Rnor5.0
RGSC_v3.4	10	8,306,033 - 8,306,163	UniSTS	RGSC3.4
Cytogenetic Map	10	q12	UniSTS

AW526208

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	8,191,057 - 8,191,282 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	8,351,813 - 8,352,037	NCBI	Rnor6.0
Rnor_5.0	10	7,148,248 - 7,148,472	UniSTS	Rnor5.0
RGSC_v3.4	10	8,252,326 - 8,252,550	UniSTS	RGSC3.4
Celera	10	7,171,784 - 7,172,008	UniSTS
Cytogenetic Map	10	q12	UniSTS

BE107936

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	10	8,813,101 - 8,813,261 (+)	Marker Load Pipeline
mRatBN7.2	10	8,306,502 - 8,306,663 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	8,466,129 - 8,466,289	NCBI	Rnor6.0
Rnor_5.0	10	7,263,427 - 7,263,587	UniSTS	Rnor5.0
RGSC_v3.4	10	8,371,358 - 8,371,518	UniSTS	RGSC3.4
Celera	10	7,286,617 - 7,286,777	UniSTS
RH 3.4 Map	10	102.03	UniSTS
Cytogenetic Map	10	q12	UniSTS

BE121046

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	8,257,051 - 8,257,217 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	8,417,019 - 8,417,184	NCBI	Rnor6.0
Rnor_5.0	10	7,214,317 - 7,214,482	UniSTS	Rnor5.0
RGSC_v3.4	10	8,320,807 - 8,320,972	UniSTS	RGSC3.4
Celera	10	7,237,217 - 7,237,382	UniSTS
RH 3.4 Map	10	129.14	UniSTS
Cytogenetic Map	10	q12	UniSTS

AU048140

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	8,424,916 - 8,425,043 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	8,584,369 - 8,584,495	NCBI	Rnor6.0
Rnor_5.0	10	7,380,443 - 7,380,569	UniSTS	Rnor5.0
RGSC_v3.4	10	8,492,735 - 8,492,861	UniSTS	RGSC3.4
Celera	10	7,404,950 - 7,405,076	UniSTS
Cytogenetic Map	10	q12	UniSTS

AU047645

Rat Assembly	Chr	Position (strand)	Source	JBrowse
RGSC_v3.4	10	8,340,611 - 8,341,155	UniSTS	RGSC3.4
Celera	10	7,257,009 - 7,257,223	UniSTS
Cytogenetic Map	10	q12	UniSTS

AU047312

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	8,247,939 - 8,248,046 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	8,407,618 - 8,407,724	NCBI	Rnor6.0
Rnor_5.0	10	7,204,916 - 7,205,022	UniSTS	Rnor5.0
RGSC_v3.4	10	8,311,694 - 8,311,800	UniSTS	RGSC3.4
Cytogenetic Map	10	q12	UniSTS

RH138661

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	8,154,747 - 8,154,943 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	8,315,511 - 8,315,706	NCBI	Rnor6.0
Rnor_5.0	10	7,111,946 - 7,112,141	UniSTS	Rnor5.0
RGSC_v3.4	10	8,216,024 - 8,216,219	UniSTS	RGSC3.4
Celera	10	7,135,489 - 7,135,684	UniSTS
Cytogenetic Map	10	q12	UniSTS

RH139599

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	8,199,868 - 8,200,052 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	8,360,619 - 8,360,802	NCBI	Rnor6.0
Rnor_5.0	10	7,157,054 - 7,157,237	UniSTS	Rnor5.0
RGSC_v3.4	10	8,261,132 - 8,261,315	UniSTS	RGSC3.4
Celera	10	7,180,580 - 7,180,763	UniSTS
Cytogenetic Map	10	q12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	178	77	76	45	32	45	6	272	132	10	158	71	93	31	29	29

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245774	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597204	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597207	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597209	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597211	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085809	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085817	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085822	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085829	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085830	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085834	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268859	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268860	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268861	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268862	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268863	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268864	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268865	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268866	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268867	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268868	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268869	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268870	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268871	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268872	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268873	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268874	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268875	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268876	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268877	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268878	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268879	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268880	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268881	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268882	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268884	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268885	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268888	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268889	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268890	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268892	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268893	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268894	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000066534 ⟹ ENSRNOP00000059781

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	8,152,198 - 8,492,773 (-)	Ensembl
Rnor_6.0 Ensembl	10	8,312,961 - 8,654,892 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000082332 ⟹ ENSRNOP00000070788

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	8,661,763 - 8,871,259 (-)	Ensembl
mRatBN7.2 Ensembl	10	8,156,064 - 8,492,773 (-)	Ensembl
Rnor_6.0 Ensembl	10	8,315,154 - 8,498,422 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000098537 ⟹ ENSRNOP00000082950

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	8,658,809 - 8,999,391 (-)	Ensembl
mRatBN7.2 Ensembl	10	8,152,198 - 8,492,773 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000100843 ⟹ ENSRNOP00000077105

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	8,658,809 - 10,754,706 (-)	Ensembl
mRatBN7.2 Ensembl	10	8,152,198 - 9,686,659 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000108330 ⟹ ENSRNOP00000078589

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	8,152,198 - 8,364,442 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000121044 ⟹ ENSRNOP00000098596

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	8,658,809 - 8,845,502 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000121049 ⟹ ENSRNOP00000098601

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	8,658,809 - 9,232,488 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000121081 ⟹ ENSRNOP00000098622

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	8,661,763 - 10,192,330 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000121085 ⟹ ENSRNOP00000098626

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	8,658,809 - 9,031,021 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000121089 ⟹ ENSRNOP00000098630

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	8,661,763 - 9,031,021 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000121090 ⟹ ENSRNOP00000098631

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	8,658,809 - 9,719,026 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000121091 ⟹ ENSRNOP00000098632

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	8,658,809 - 9,719,026 (-)	Ensembl

RefSeq Acc Id:

NM_001106974 ⟹ NP_001100444

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 8,999,391 (-)	NCBI
mRatBN7.2	10	8,152,198 - 8,492,773 (-)	NCBI
Rnor_6.0	10	8,312,961 - 8,654,892 (-)	NCBI
Rnor_5.0	10	7,109,396 - 7,482,255 (-)	NCBI
RGSC_v3.4	10	8,213,474 - 8,561,580 (-)	RGD
Celera	10	7,132,939 - 7,472,569 (-)	RGD

Sequence:

show sequence

GCGTCCCTTCCTTGTCTGTGAAGAAAACTTTCACATTAAGAGTTGCTGATGCAGGATTTTCTTT
CCTTTCCCCTCTCCGCCGCCTGTGGATGAGCACTTGGCTCCTGACAGAAGCGATTTGGCTCTCG
GCTTTGTAGTTGAGAAGAAGTTGGGTCTATAGATTTCTTTCCCCCTCTAACTCTCTATTGATGT
GTTCAGCCTTGGAGGGAATAAAGCCTCCATTTAAAGCATGTTGGCGTCGCAAGGAGTCCTTCTG
CATTCTTATGGCGTGCCTATGGTTGTGCCTGCTGCCCCCTTCTTCCCGGGACTGATGCAGGGTA
ATCAGGAAGCAGCGGCCGCCCCTGACACAATGGCTCAGCCTTATGCCTCAGCGCAGTTCGCTCC
ACCCCAGAATGGCATCCCTGCAGAATACACGGCCCCTCATCCCCATCCCGCGCCAGAGTACACC
GGCCAGACCACTGTCCCCGACCACACATTAAACCTGTATCCTCCTACACAGACGCACTCGGAGC
AGAGCGCTGATACAAGCGCACAGACCGTCTCCGGCACCGCCACACAGACAGATGATGCCGCCCC
GACCGACGGCCAGCCCCAGACACAACCTTCTGAAAACACAGAAAACAAGTCCCAGCCCAAGCGG
CTGCATGTGTCCAACATCCCCTTCCGGTTCCGGGATCCAGACCTCCGACAAATGTTTGGCCAAT
TTGGTAAAATATTAGATGTTGAAATTATTTTTAATGAGCGGGGCTCGAAGGGATTTGGTTTCGT
AACTTTCGAAAATAGTGCGGATGCGGACAGGGCGAGGGAGAAATTGCACGGTACCGTGGTAGAG
GGCCGTAAAATCGAGGTTAATAATGCGACAGCACGCGTGATGACTAATAAAAAGGCCGTGAACC
CCTACACCAATGGCTGGAAATTAAATCCAGTTGTGGGCGCGGTCTACAGCCCCGACTTCTATGC
AGGCACGGTGCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGGCCCCAGTTCA
CTTGTATATACTTCTGCAATGCCTGGCTTTCCATATCCGGCCGCCACTGCTGCAGCTGCATACC
GAGGGGCTCACCTTCGAGGCCGTGGTCGCACCGTGTACAACACCTTCAGAGCTGCGGCGCCCCC
ACCCCCAATCCCGGCCTATGGCGGTGTTGTTTACCAGGATGGATTTTATGGTGCAGACATTTAT
GGTGGTTACGCTGCATACCGCTACGCCCAGCCCACCCCTGCCACTGCTGCTGCCTACAGTGACA
GTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACACACTTGCTCCAGCCCCCACCTACGG
CGTTGGTGCCATGAATGCTTTTGCGCCCTTGACCGATGCCAAGACTAGGAGCCATGCTGATGAT
GTGGGTCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCGAGGGGGATACAACCGTTTTGCTC
CATATTAAATGATAAAACCATTAAACAAACAAACAAAAAACAAAACAAAAACAAAAAAACCAAC
CTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCCGAGTGTTGCGACACATGCAGTAGGACA
TCACTTTAGCAACTCAAAGAAACAACTAAAAAAAAAAAAAATCAAAAAAAAGAGGAAAAATTAC
ATTTTTTATCTTATACCTCAGATATTTTGTTCTGTGTATTTTAATATTGTGGGTCTTTGGTTTA
TGAAGGTTTTTGTAGTTCAGTTGCTGGCTGTAGGAGTTTTTGTGGTTGATCTAGAGAGAGGCTA
GATATAAATAAAAACCGATTTAGGGCCATATCCAGAGTGCTATATTATGTAAATGGATTATATA
TGCCGAACATGAAGCTACTGGGGTTACGCTGTTTGGGAAGACTGTAAGTGGCAAGTCATTCTTT
CTGCATCTATATTATTTTATTCTGTGAAAGGGGAGGCCGGGAGGGGCTTAGGGGTTTGGGACTG
GGGTTTGGCTGAAAGGAAAAAAAAAGAAAATATATATATATATAAATACATATATATAGTAACT
GATGAATCTAAATGACCCACTGCACCAACTATCATAAATCTATGGTTCGAAGTTACTCCTGGCA
AAGGCAAGCCAAAGGCTGTGTTAAGAATCTGCTTCTTATAGCACGGAGATTGCAGTTGAACGAA
GCTGTGACGGTCCGCCCTCTTATCATTCCACCGCAGTACGCAGCTTCTTACCTACCCACTAGTT
ATTTAAGCCAAGGCTACTAGTTAGGCCATCAATAAGCATTCTTTTTATATTTCTTCCAGTATGA
GAAATTATTGATATCACTGCTGACTTTTATATTACGGGAGGGAAAATTAACATTAATAAAAGGT
GATAAAAAGCACTGTTTCTATTTTTTTCTTTTTTTCCAAAAAAGAAAGTAATAAAAACTTAAAT
TCTTTGTACCAGTTAAAAATATGTATAAAATTTACATCTGTGCAGTGGAGTTATGTTCTAGAAA
CAGTCTCTGAGGCTTTAGTTTTAGCTTAGTAGATTAACTGTTAGAGACAGACGTATAATTTTTA
TGGAATTACATGATAATCATATCTGGATTTATAGTCGCATTTTACAAGTATCGCAATCATTGAA
TAGAGATAATCACGGTATTTTCATCAGCTTGATACTTTTTGAAAACATGACTGCGCTGTGAGCA
ACTTGCAATTTTTCAGTCTGTGAGAGCCTGCCCTTCCTTCTCCCCAGTGCCCCAGGGTTATGTT
AAACTGGTGTCTTTACTTCTATCGCCAAGGCCCAAGACAATTGTCAGAAGGAAGCAAAAACAAG
ACAAAAAACAAAACTAGAACCATGCCCTCCTTCCCCAAAGAGCAGTGTCTGCCGCATCCTTTTC
CGGAGCAGGGCCAGAGCAACACAGCCGAAAAATTGCAGCTTGTGAATTTCTTCTGTTTGAATCC
CCCCATGTTGTCCTGTTTACAAGTTAACCTAAGTTGGGGTATCTGTCATGGGTCTTCCTGTTTT
TGTATTTAAATTCTAAAATATCAGCAAGCTGTTCCCTGAGTAGTGTTTTTGCCTGTGTGTGCAG
TGCCGGCCCCACGGCACGCACTTTAGTAAGTTATCAACTCACGCTGTGAACCTGCCAATCTGCT
GTAACAACTCTGCTTTAAAATCAAAACCAAACAAAACTTTAAAAAGAAAAAAAAAAGTGTTTGT
GATCCAGCTTTTCCTCATCATCCTACGTGCATGCCCGTAAGATCGGTTGGATATTAAACCATCA
ATAAAGTTTCATGAGATTTGAAAACAAAGTTTTCGTAGCTTCGATATCTAAGACAGAGGATCAT
GGTTTGGGAGAGGAAGAAAAGCAAGGGGCGAGGAGGGGAAGGGAGAGAGACTGCTGAACTGGTG
AGAAGAGGAAAAAAAATCTAGGAACTGGTCTTCTTTCACCAGACCTCTTTGAGTAGGGAGAGAT
GGGGCCAGAGGGGGACAGGTTGACAACATCACGTTCCCACTCCCCTGGCCTGCTACAGTGCGCA
CCTGGTTGATGTTACCCAAGGCAACAATTTATCATGATGCTGTAGCATTCGACCCCAGATGGGG
TCAAGGTAGTAAAAGGAAGGGGCTGCACAAAGGTCAACAGACTCCTCCCAGTCGCCCCAGCTTT
CCAAGCCTAGAACCTGCATTGTGTATGAAATCACAAACATGGAATTCTTACTGTGCTGGCTAAA
GTAAAACTCATTTGCGGTTTTGATTTCCATCAACGAACTGTACTTTCCCCCACGACCGTATGTA
GTTTTAATAAAAATCATTTAGAGCAAGTGGGTGCCAACCGATGTCGCAGAACCTTTTGTCTAGG
CACTCCGCTGAGCTGCCGATAAGTCGTTTTAAACTGTCATGTCAGAGGTGTAAACAAACATTTT
GGATTTTTTAAAACAACAGTATTTATTTGGAATGTTTTCATTTATCTAAATAACTATTGCTATT
ATGAATTATGGAAAAAAGATTAATGTGGCATATAGTGACTTCTTAACACACATCACTCAATCTG
CAAACCCAGAAAATGTGTATATCTGTCTTTAGAAATTAGTGTTTATATCACTTACAGTGGTTTG
TGAATAAAGAAAACTGGTTTGTAATATCAAAAAATAAAAGCTTAGTCTGAAAAGGTA

hide sequence

RefSeq Acc Id:

XM_006245774 ⟹ XP_006245836

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,001,811 (-)	NCBI
mRatBN7.2	10	8,152,198 - 8,495,247 (-)	NCBI
Rnor_6.0	10	8,312,961 - 8,657,668 (-)	NCBI
Rnor_5.0	10	7,109,396 - 7,482,255 (-)	NCBI

Sequence:

show sequence

AGTACCCTGAATTGCTGAGCCATCTCTCCGGTCCCAATTTTGCTGGTCTGTCTGTCACATTTAT
ACAATTCCCAAGTTGCCAAAGCACCTGCAGAACTTTGCCCTCACACTCTTCTACATCTGTGTAC
TCAAGATGTACATACGTCAGTTTATGCTCTAAATGAATAAGTTGTGCGTCCTGCTTTCTGCCAC
CACAGCTTTTGCACTTTATAATACCATTGAGCTGTAATTCAGTGTGCCTGGGACCTTCCCTCAG
CACTGAGGAGTGCCTCTGTGTCTTGGTTGTCAACGGGAAGTCAACTAGAAAACATACCTGTTTC
GGGTAATGTGTCTGTCCTTGCTGCTAACTTCTCAGAAATCTGGTTTTGAAAGTCATGGTGAGAA
GCTAAAGTTAGAACCGGTATTGGGCAGTCTTATGAGATGGGTCAGTGTGCAGCTGTTCCAGGAG
CTTTCGGGATTGCACAACATGGCCACTCCGATGCATGTGAATCAATTACAGAGAAACCTTGTCA
AGATGGCCAAACCTCCAGCCTTAAATAATTGAATTCTCTGCCAAACCCTGTCTGCTGTCGTTAT
CTAGAAATGTAATTATGTAGCTAAATCAAGCAACTAAAATTAGTGTAGTGTAAAAACACCTTGG
CTATCTGAAAGTGGACGAATTGACATTGGGCTTAGGGAAAGCCAATAGTTGGGTATGGTGTGGT
GGTGTCTGAAGTTCTCGCTCATCATCATTTTGACAAAATCTATATTGTGCATCCTGTTGAGAGA
GAAAAGTGGTTTGTGGCAAGGGGGTGTCTGATTTGAAGGTGACATTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTCCAGAAGTCAATGTCTGGTAACTTCTTACATTCCTTTCTTTATGTTTTTTGA
GACTGTGTCTCATTGCATACAAATGTCACAGATTCAAGACTAGTTGGCTATGAGCCCCAGGGAT
CCTCTGATCTATGCATAATGAGTGCTAGCATTGTAGGATGGTCCTACCATGCTTATCACAGAGG
TCTTGGGTGTCTGAAGCCAGGCCTTCGAGCTTCCTCAGTATTTTACCAATTGAGCTATCTGCCA
GGCCCTATGAAGGCCATCTTCAATTGTCTTCAGCCCTTACTTCATGAGAGTTCCAGATTGCTAG
TTATGCCCACATATTTCCTGGTATGAAAAGTGGGAACATGCCAGTTGATCATCATCTGAGCCCT
CACATCTGAAGTCAAAGATGGGTGAATACCAACTGTGAGGGGAAGAGCAGAACCGGTGGTGATT
AACTCCCTCTATTGCACACTGCAAGGAGGTGACGAGATATTCTGACATTGTTACATGCCCAAAT
AGATCTGGAGTCTACGAGGCAAATGAAGTTGCTCGAGACGGTAGAGCTAGGAAAGGGACACCCC
AGCTTTCACTTTGCATACTCCTCAACACCTTTCATCTCTGAAAGCGAGGGTGGTGGGAGGGAAT
TCATCTTTGTTTAATATATAGCAGATTCATGTATCACAGCTGGGACACACATGTAAAAGCCATG
TGAAATCCCTTCACACATGAACACAGCACCAGCAAGTCTGCACCTACTCTGTGGCCCCCAAGAT
AGCTAACACATTTCTAGATCACAAGTCACAGTGCAATCCAGCAAGACAACTAGGGATTGTGTAT
GAGGTATTTTAAATTCAGCACTGCCTCCTACTGGCTGCAAAGTGGCTGACTAGCGTGCGTTCGG
GTTCCTCATGGTTACTTGGCTTCCTGGGTCCGGGATTAGCCCCTGCTTCAGAGATGTGGAAGGA
CTGAGTGCAATAACCCACAAAACTAATTTACTCAGACTTCTGCTATTATTTCCTTTTAGCTATG
AATTGCCTCTTCAAACTGAAATCGAGTGAAAAAAGGGGAGGAAAGTGAGTCAAATATTTTGAGA
CAGTTTCGTGTAGCCCAAGCTCGCCTAAAACTTGCTATACAGCTGAGCTCCCGATTTTCCTATA
CCCACCTCTGAGTTCCAGGACCACTGAGATTTGCTACCACATACTGATTATTCTTAGGTAATTT
TTGATCAGCTGCCCACATGAACCTGCTACCTTTGAGTGGGTTTTTTGCTGTCATTTTTCTTGTT
GTTGTTCTTGTTTCTTTGTTTGGTTTGGTTTTTGTACATAACTGTGGGGGGATGAGTATAAGAA
TGAAAATGTATGTGCAATGTCGAAGGGTGATCTCCAGGTATCTTCCTTTATTGCTTTTTACTTA
CGTAAAGAGAGGGTCTTTCACTGAACCACTGAATGTGGAACTTTCTGTTCGGCTATGCTGGCTC
ACAGGTGAGACCCAGGATCCTCCTGTCTCCGTCTTCCCAGTGCTGGGAATACACGTGTATGCCA
CATTGCTTGACTTCATACACGGGCATTGGAGATCCAAACTTGGGTCCTCATACATATATGATAG
TCCATAAGTTTACATAACAATCAGTTGCAATTTAGAACTTAAACTTAGGCTCCGGTGATGGTTT
ATATAGGTAAAGATTTAAGTTTTCTAAGTTGAAATTGATTGTCCTGTAAGCTTACACATTTCTA
TTCATTATTCTCTCTAAAAATCTCATGTAGACCCAGCCCCTTGCAATTTGGCCCAGTTCCTCAG
GACAAATGTCTTTTCTTTTTCCCTGATTCCCTGTCACTCCATCTCCCTCGGTCTGAGAACTAAA
TTAATGAAGAGTATTTGGTTAGTCATGTTGGGCGAGCTGCTCCCAAAATAGCTCCTTCCATTTT
GGTAGCTCCGACCCTGCAGCTGCCGCGTCCCTTCCTTGTCTGTGAAGAAAACTTTCACATTAAG
AGTTGCTGATGCAGGATTTTCTTTCCTTTCCCCTCTCCGCCGCCTGTGGATGAGCACTTGGCTC
CTGACAGAAGCGATTTGGCTCTCGGCTTTGTAGTTGAGAAGAAGTTGGGTCTATAGATTTCTTT
CCCCCTCTAACTCTCTATTGATGTGTTCAGCCTTGGAGGGAATAAAGCCTCCATTTAAAGCATG
TTGGCGTCGCAAGGAGTCCTTCTGCATTCTTATGGCGTGCCTATGGTTGTGCCTGCTGCCCCCT
TCTTCCCGGGACTGATGCAGGGTAATCAGGAAGCAGCGGCCGCCCCTGACACAATGGCTCAGCC
TTATGCCTCAGCGCAGTTCGCTCCACCCCAGAATGGCATCCCTGCAGAATACACGGCCCCTCAT
CCCCATCCCGCGCCAGAGTACACCGGCCAGACCACTGTCCCCGACCACACATTAAACCTGTATC
CTCCTACACAGACGCACTCGGAGCAGAGCGCTGATACAAGCGCACAGACCGTCTCCGGCACCGC
CACACAGACAGATGATGCCGCCCCGACCGACGGCCAGCCCCAGACACAACCTTCTGAAAACACA
GAAAACAAGTCCCAGCCCAAGCGGCTGCATGTGTCCAACATCCCCTTCCGGTTCCGGGATCCAG
ACCTCCGACAAATGTTTGGCCAATTTGGTAAAATATTAGATGTTGAAATTATTTTTAATGAGCG
GGGCTCGAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCGGATGCGGACAGGGCGAGGGAG
AAATTGCACGGTACCGTGGTAGAGGGCCGTAAAATCGAGGTTAATAATGCGACAGCACGCGTGA
TGACTAATAAAAAGGCCGTGAACCCCTACACCAATGGCTGGAAATTAAATCCAGTTGTGGGCGC
GGTCTACAGCCCCGACTTCTATGCAGGCACGGTGCTGTTGTGCCAGGCCAACCAGGAGGGATCT
TCCATGTACAGTGGCCCCAGTTCACTTGTATATACTTCTGCAATGCCTGGCTTTCCATATCCGG
CCGCCACTGCTGCAGCTGCATACCGAGGGGCTCACCTTCGAGGCCGTGGTCGCACCGTGTACAA
CACCTTCAGAGCTGCGGCGCCCCCACCCCCAATCCCGGCCTATGGCGGAGTAGTGTATCAAGAG
CCAGTGTATGGCAATAAATTGCTACAGGGTGGTTACGCTGCATACCGCTACGCCCAGCCCACCC
CTGCCACTGCTGCTGCCTACAGTGACAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCA
CACACTTGCTCCAGCCCCCACCTACGGCGTTGGTGCCATGAATGCTTTTGCGCCCTTGACCGAT
GCCAAGACTAGGAGCCATGCTGATGATGTGGGTCTCGTTCTTTCTTCATTGCAGGCTAGTATAT
ACCGAGGGGGATACAACCGTTTTGCTCCATATTAAATGATAAAACCATTAAACAAACAAACAAA
AAACAAAACAAAAACAAAAAAACCAACCTTCCAATGTGGGGAGAGAGGAAGCTTTCCGAGGCCC
GAGTGTTGCGACACATGCAGTAGGACATCACTTTAGCAACTCAAAGAAACAACTAAAAAAAAAA
AAAATCAAAAAAAAGAGGAAAAATTACATTTTTTATCTTATACCTCAGATATTTTGTTCTGTGT
ATTTTAATATTGTGGGTCTTTGGTTTATGAAGGTTTTTGTAGTTCAGTTGCTGGCTGTAGGAGT
TTTTGTGGTTGATCTAGAGAGAGGCTAGATATAAATAAAAACCGATTTAGGGCCATATCCAGAG
TGCTATATTATGTAAATGGATTATATATGCCGAACATGAAGCTACTGGGGTTACGCTGTTTGGG
AAGACTGTAAGTGGCAAGTCATTCTTTCTGCATCTATATTATTTTATTCTGTGAAAGGGGAGGC
CGGGAGGGGCTTAGGGGTTTGGGACTGGGGTTTGGCTGAAAGGAAAAAAAAAGAAAATATATAT
ATATATAAATACATATATATAGTAACTGATGAATCTAAATGACCCACTGCACCAACTATCATAA
ATCTATGGTTCGAAGTTACTCCTGGCAAAGGCAAGCCAAAGGCTGTGTTAAGAATCTGCTTCTT
ATAGCACGGAGATTGCAGTTGAACGAAGCTGTGACGGTCCGCCCTCTTATCATTCCACCGCAGT
ACGCAGCTTCTTACCTACCCACTAGTTATTTAAGCCAAGGCTACTAGTTAGGCCATCAATAAGC
ATTCTTTTTATATTTCTTCCAGTATGAGAAATTATTGATATCACTGCTGACTTTTATATTACGG
GAGGGAAAATTAACATTAATAAAAGGTGATAAAAAGCACTGTTTCTATTTTTTTCTTTTTTTCC
AAAAAAGAAAGTAATAAAAACTTAAATTCTTTGTACCAGTTAAAAATATGTATAAAATTTACAT
CTGTGCAGTGGAGTTATGTTCTAGAAACAGTCTCTGAGGCTTTAGTTTTAGCTTAGTAGATTAA
CTGTTAGAGACAGACGTATAATTTTTATGGAATTACATGATAATCATATCTGGATTTATAGTCG
CATTTTACAAGTATCGCAATCATTGAATAGAGATAATCACGGTATTTTCATCAGCTTGATACTT
TTTGAAAACATGACTGCGCTGTGAGCAACTTGCAATTTTTCAGTCTGTGAGAGCCTGCCCTTCC
TTCTCCCCAGTGCCCCAGGGTTATGTTAAACTGGTGTCTTTACTTCTATCGCCAAGGCCCAAGA
CAATTGTCAGAAGGAAGCAAAAACAAGACAAAAAACAAAACTAGAACCATGCCCTCCTTCCCCA
AAGAGCAGTGTCTGCCGCATCCTTTTCCGGAGCAGGGCCAGAGCAACACAGCCGAAAAATTGCA
GCTTGTGAATTTCTTCTGTTTGAATCCCCCCATGTTGTCCTGTTTACAAGTTAACCTAAGTTGG
GGTATCTGTCATGGGTCTTCCTGTTTTTGTATTTAAATTCTAAAATATCAGCAAGCTGTTCCCT
GAGTAGTGTTTTTGCCTGTGTGTGCAGTGCCGGCCCCACGGCACGCACTTTAGTAAGTTATCAA
CTCACGCTGTGAACCTGCCAATCTGCTGTAACAACTCTGCTTTAAAATCAAAACCAAACAAAAC
TTTAAAAAGAAAAAAAAAAGTGTTTGTGATCCAGCTTTTCCTCATCATCCTACGTGCATGCCCG
TAAGATCGGTTGGATATTAAACCATCAATAAAGTTTCATGAGATTTGAAAACAAAGTTTTCGTA
GCTTCGATATCTAAGACAGAGGATCATGGTTTGGGAGAGGAAGAAAAGCAAGGGGCGAGGAGGG
GAAGGGAGAGAGACTGCTGAACTGGTGAGAAGAGGAAAAAAAATCTAGGAACTGGTCTTCTTTC
ACCAGACCTCTTTGAGTAGGGAGAGATGGGGCCAGAGGGGGACAGGTTGACAACATCACGTTCC
CACTCCCCTGGCCTGCTACAGTGCGCACCTGGTTGATGTTACCCAAGGCAACAATTTATCATGA
TGCTGTAGCATTCGACCCCAGATGGGGTCAAGGTAGTAAAAGGAAGGGGCTGCACAAAGGTCAA
CAGACTCCTCCCAGTCGCCCCAGCTTTCCAAGCCTAGAACCTGCATTGTGTATGAAATCACAAA
CATGGAATTCTTACTGTGCTGGCTAAAGTAAAACTCATTTGCGGTTTTGATTTCCATCAACGAA
CTGTACTTTCCCCCACGACCGTATGTAGTTTTAATAAAAATCATTTAGAGCAAGTGGGTGCCAA
CCGATGTCGCAGAACCTTTTGTCTAGGCACTCCGCTGAGCTGCCGATAAGTCGTTTTAAACTGT
CATGTCAGAGGTGTAAACAAACATTTTGGATTTTTTAAAACAACAGTATTTATTTGGAATGTTT
TCATTTATCTAAATAACTATTGCTATTATGAATTATGGAAAAAAGATTAATGTGGCATATAGTG
ACTTCTTAACACACATCACTCAATCTGCAAACCCAGAAAATGTGTATATCTGTCTTTAGAAATT
AGTGTTTATATCACTTACAGTGGTTTGTGAATAAAGAAAACTGGTTTGTAATATCAAAAAATAA
AAGCTTAGTCTGAAAAGGTA

hide sequence

RefSeq Acc Id:

XM_017597204 ⟹ XP_017452693

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,350 - 10,754,648 (-)	NCBI
mRatBN7.2	10	8,156,009 - 10,248,089 (-)	NCBI
Rnor_6.0	10	8,316,784 - 10,437,777 (-)	NCBI

Sequence:

show sequence

GCCTGCTTCTTTCCTCATCCCCAAGAACAGGCATCGAGAGCCCCCACCTGGCGCCATGGCCAGC
CCCCCAGGCAGCCCTGAAGATGCAGACAAGCTGAGAGAAAGCAGGGAGGGCCGGCAGAGGAGGG
AGGACGACGCTCCAGAGCAGAAGAGGTTGAGGCTGGGGCTGCGAGCGGGAAGCGAGCCCCAGGA
CGGAGCCACAACACCACGTCCAGCCCGGGACGAGCGGGACGAGCTCGCCACCCAGACAGGTGGC
GAAGGCAGAAGTGAACAGCTGTCTCTGCCTCCAAGCCTGGTGGAGAGTCAGGTTTTGGTGAGTC
CTCCTGTTGATCAAGCTGAGGAAACTGCTCAAAGACCTCATGAAAGTGGGACTTACGGCTTCCT
TGATCAGGCTCAGCATTCAGATATCAAAGCCGACTGCAGTAACTGCGTGGAGACAGAGGACAGA
AAGGTTTTGAGGCAACCGATGAATTGTGAAAGAGAGCAGCTGAGGGGTAATCAGGAAGCAGCGG
CCGCCCCTGACACAATGGCTCAGCCTTATGCCTCAGCGCAGTTCGCTCCACCCCAGAATGGCAT
CCCTGCAGAATACACGGCCCCTCATCCCCATCCCGCGCCAGAGTACACCGGCCAGACCACTGTC
CCCGACCACACATTAAACCTGTATCCTCCTACACAGACGCACTCGGAGCAGAGCGCTGATACAA
GCGCACAGACCGTCTCCGGCACCGCCACACAGACAGATGATGCCGCCCCGACCGACGGCCAGCC
CCAGACACAACCTTCTGAAAACACAGAAAACAAGTCCCAGCCCAAGCGGCTGCATGTGTCCAAC
ATCCCCTTCCGGTTCCGGGATCCAGACCTCCGACAAATGTTTGGCCAATTTGGTAAAATATTAG
ATGTTGAAATTATTTTTAATGAGCGGGGCTCGAAGGGATTTGGTTTCGTAACTTTCGAAAATAG
TGCGGATGCGGACAGGGCGAGGGAGAAATTGCACGGTACCGTGGTAGAGGGCCGTAAAATCGAG
GTTAATAATGCGACAGCACGCGTGATGACTAATAAAAAGGCCGTGAACCCCTACACCAATGGCT
GGAAATTAAATCCAGTTGTGGGCGCGGTCTACAGCCCCGACTTCTATGCAGGCACGGTGCTGTT
GTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGGCCCCAGTTCACTTGTATATACTTCT
GCAATGCCTGGCTTTCCATATCCGGCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCACCTTC
GAGGCCGTGGTCGCACCGTGTACAACACCTTCAGAGCTGCGGCGCCCCCACCCCCAATCCCGGC
CTATGGCGGTGTTGTTTACCAGGATGGATTTTATGGTGCAGACATTTATGGTGGTTACGCTGCA
TACCGCTACGCCCAGCCCACCCCTGCCACTGCTGCTGCCTACAGTGACAGAAATCAGTTCGTCT
TCGTTGCAACAGATGAAATTTCTTGTAACACCTCGGCAGTTACGGACGAGTTTATGCTGCCGAC
CCCTACCACCACACACTTGCTCCAGCCCCCACCTACGGCGTTGGTGCCATGCCCCAAGGTTCCA
GCCCCAGCACAGACTTCAGAGGAGCTAAGCTGCAGACTTCCAGGCCTCTGCTGTCAGGCAGCTG
AGCATCTGCCTGCCTCTCCTCCCCTTTTACAATTCATGTTTAAAGTCATAGTCGCCCAGGAGAG
AAAGTAGACAGAGGGGCACACTTTGTGAGTGTGCCTAGTACATAAGAAATTAAGGAATCAGCTG
GCTTTGGGGGGGGTCATCTTGTTTGTTTTGGGTTTTTGGGTTTTTTTTGCAGTTTTTTTTTTTT
TTTTGTTTTGT

hide sequence

RefSeq Acc Id:

XM_017597207 ⟹ XP_017452696

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 10,754,648 (-)	NCBI
mRatBN7.2	10	8,152,198 - 10,248,078 (-)	NCBI
Rnor_6.0	10	8,312,961 - 10,437,774 (-)	NCBI

Sequence:

show sequence

TGCTTCTTTCCTCATCCCCAAGAACAGGCATCGAGAGCCCCCACCTGGCGCCATGGCCAGCCCC
CCAGGCAGCCCTGAAGATGCAGACAAGCTGAGAGAAAGCAGGGAGGGCCGGCAGAGGAGGGAGG
ACGACGCTCCAGAGCAGAAGAGGTTGAGGCTGGGGCTGCGAGCGGGAAGCGAGCCCCAGGACGG
AGCCACAACACCACGTCCAGCCCGGGACGAGCGGGACGAGCTCGCCACCCAGACAGGTGGCGAA
GGCAGAAGTGAACAGCTGTCTCTGCCTCCAAGCCTGGTGGAGAGTCAGGTTTTGGTGAGTCCTC
CTGTTGATCAAGCTGAGGAAACTGCTCAAAGACCTCATGAAAGTGGGACTTACGGCTTCCTTGA
TCAGGCTCAGCATTCAGATATCAAAGCCGACTGCAGTAACTGCGTGGAGACAGAGGACAGAAAG
GTTTTGAGGCAACCGATGAATTGTGAAAGAGAGCAGCTGAGGGGTAATCAGGAAGCAGCGGCCG
CCCCTGACACAATGGCTCAGCCTTATGCCTCAGCGCAGTTCGCTCCACCCCAGAATGGCATCCC
TGCAGAATACACGGCCCCTCATCCCCATCCCGCGCCAGAGTACACCGGCCAGACCACTGTCCCC
GACCACACATTAAACCTGTATCCTCCTACACAGACGCACTCGGAGCAGAGCGCTGATACAAGCG
CACAGACCGTCTCCGGCACCGCCACACAGACAGATGATGCCGCCCCGACCGACGGCCAGCCCCA
GACACAACCTTCTGAAAACACAGAAAACAAGTCCCAGCCCAAGCGGCTGCATGTGTCCAACATC
CCCTTCCGGTTCCGGGATCCAGACCTCCGACAAATGTTTGGCCAATTTGGTAAAATATTAGATG
TTGAAATTATTTTTAATGAGCGGGGCTCGAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGC
GGATGCGGACAGGGCGAGGGAGAAATTGCACGGTACCGTGGTAGAGGGCCGTAAAATCGAGGTT
AATAATGCGACAGCACGCGTGATGACTAATAAAAAGGCCGTGAACCCCTACACCAATGGCTGGA
AATTAAATCCAGTTGTGGGCGCGGTCTACAGCCCCGACTTCTATGCAGGCACGGTGCTGTTGTG
CCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGGCCCCAGTTCACTTGTATATACTTCTGCA
ATGCCTGGCTTTCCATATCCGGCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCACCTTCGAG
GCCGTGGTCGCACCGTGTACAACACCTTCAGAGCTGCGGCGCCCCCACCCCCAATCCCGGCCTA
TGGCGGTGTTGTTTACCAGGATGGATTTTATGGTGCAGACATTTATGGTGGTTACGCTGCATAC
CGCTACGCCCAGCCCACCCCTGCCACTGCTGCTGCCTACAGTGACAGTTACGGACGAGTTTATG
CTGCCGACCCCTACCACCACACACTTGCTCCAGCCCCCACCTACGGCGTTGGTGCCATGAATGC
TTTTGCGCCCTTGACCGATGCCAAGACTAGGAGCCATGCTGATGATGTGGGTCTCGTTCTTTCT
TCATTGCAGGCTAGTATATACCGAGGGGGATACAACCGTTTTGCTCCATATTAAATGATAAAAC
CATTAAACAAACAAACAAAAAACAAAACAAAAACAAAAAAACCAACCTTCCAATGTGGGGAGAG
AGGAAGCTTTCCGAGGCCCGAGTGTTGCGACACATGCAGTAGGACATCACTTTAGCAACTCAAA
GAAACAACTAAAAAAAAAAAAAATCAAAAAAAAGAGGAAAAATTACATTTTTTATCTTATACCT
CAGATATTTTGTTCTGTGTATTTTAATATTGTGGGTCTTTGGTTTATGAAGGTTTTTGTAGTTC
AGTTGCTGGCTGTAGGAGTTTTTGTGGTTGATCTAGAGAGAGGCTAGATATAAATAAAAACCGA
TTTAGGGCCATATCCAGAGTGCTATATTATGTAAATGGATTATATATGCCGAACATGAAGCTAC
TGGGGTTACGCTGTTTGGGAAGACTGTAAGTGGCAAGTCATTCTTTCTGCATCTATATTATTTT
ATTCTGTGAAAGGGGAGGCCGGGAGGGGCTTAGGGGTTTGGGACTGGGGTTTGGCTGAAAGGAA
AAAAAAAGAAAATATATATATATATAAATACATATATATAGTAACTGATGAATCTAAATGACCC
ACTGCACCAACTATCATAAATCTATGGTTCGAAGTTACTCCTGGCAAAGGCAAGCCAAAGGCTG
TGTTAAGAATCTGCTTCTTATAGCACGGAGATTGCAGTTGAACGAAGCTGTGACGGTCCGCCCT
CTTATCATTCCACCGCAGTACGCAGCTTCTTACCTACCCACTAGTTATTTAAGCCAAGGCTACT
AGTTAGGCCATCAATAAGCATTCTTTTTATATTTCTTCCAGTATGAGAAATTATTGATATCACT
GCTGACTTTTATATTACGGGAGGGAAAATTAACATTAATAAAAGGTGATAAAAAGCACTGTTTC
TATTTTTTTCTTTTTTTCCAAAAAAGAAAGTAATAAAAACTTAAATTCTTTGTACCAGTTAAAA
ATATGTATAAAATTTACATCTGTGCAGTGGAGTTATGTTCTAGAAACAGTCTCTGAGGCTTTAG
TTTTAGCTTAGTAGATTAACTGTTAGAGACAGACGTATAATTTTTATGGAATTACATGATAATC
ATATCTGGATTTATAGTCGCATTTTACAAGTATCGCAATCATTGAATAGAGATAATCACGGTAT
TTTCATCAGCTTGATACTTTTTGAAAACATGACTGCGCTGTGAGCAACTTGCAATTTTTCAGTC
TGTGAGAGCCTGCCCTTCCTTCTCCCCAGTGCCCCAGGGTTATGTTAAACTGGTGTCTTTACTT
CTATCGCCAAGGCCCAAGACAATTGTCAGAAGGAAGCAAAAACAAGACAAAAAACAAAACTAGA
ACCATGCCCTCCTTCCCCAAAGAGCAGTGTCTGCCGCATCCTTTTCCGGAGCAGGGCCAGAGCA
ACACAGCCGAAAAATTGCAGCTTGTGAATTTCTTCTGTTTGAATCCCCCCATGTTGTCCTGTTT
ACAAGTTAACCTAAGTTGGGGTATCTGTCATGGGTCTTCCTGTTTTTGTATTTAAATTCTAAAA
TATCAGCAAGCTGTTCCCTGAGTAGTGTTTTTGCCTGTGTGTGCAGTGCCGGCCCCACGGCACG
CACTTTAGTAAGTTATCAACTCACGCTGTGAACCTGCCAATCTGCTGTAACAACTCTGCTTTAA
AATCAAAACCAAACAAAACTTTAAAAAGAAAAAAAAAAGTGTTTGTGATCCAGCTTTTCCTCAT
CATCCTACGTGCATGCCCGTAAGATCGGTTGGATATTAAACCATCAATAAAGTTTCATGAGATT
TGAAAACAAAGTTTTCGTAGCTTCGATATCTAAGACAGAGGATCATGGTTTGGGAGAGGAAGAA
AAGCAAGGGGCGAGGAGGGGAAGGGAGAGAGACTGCTGAACTGGTGAGAAGAGGAAAAAAAATC
TAGGAACTGGTCTTCTTTCACCAGACCTCTTTGAGTAGGGAGAGATGGGGCCAGAGGGGGACAG
GTTGACAACATCACGTTCCCACTCCCCTGGCCTGCTACAGTGCGCACCTGGTTGATGTTACCCA
AGGCAACAATTTATCATGATGCTGTAGCATTCGACCCCAGATGGGGTCAAGGTAGTAAAAGGAA
GGGGCTGCACAAAGGTCAACAGACTCCTCCCAGTCGCCCCAGCTTTCCAAGCCTAGAACCTGCA
TTGTGTATGAAATCACAAACATGGAATTCTTACTGTGCTGGCTAAAGTAAAACTCATTTGCGGT
TTTGATTTCCATCAACGAACTGTACTTTCCCCCACGACCGTATGTAGTTTTAATAAAAATCATT
TAGAGCAAGTGGGTGCCAACCGATGTCGCAGAACCTTTTGTCTAGGCACTCCGCTGAGCTGCCG
ATAAGTCGTTTTAAACTGTCATGTCAGAGGTGTAAACAAACATTTTGGATTTTTTAAAACAACA
GTATTTATTTGGAATGTTTTCATTTATCTAAATAACTATTGCTATTATGAATTATGGAAAAAAG
ATTAATGTGGCATATAGTGACTTCTTAACACACATCACTCAATCTGCAAACCCAGAAAATGTGT
ATATCTGTCTTTAGAAATTAGTGTTTATATCACTTACAGTGGTTTGTGAATAAAGAAAACTGGT
TTGTAATATCAAAAAATAAAAGCTTAGTCTGAAAAGGTA

hide sequence

RefSeq Acc Id:

XM_017597209 ⟹ XP_017452698

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 10,754,648 (-)	NCBI
mRatBN7.2	10	8,152,198 - 10,248,078 (-)	NCBI
Rnor_6.0	10	8,312,961 - 10,437,775 (-)	NCBI

Sequence:

show sequence

CTGCTTCTTTCCTCATCCCCAAGAACAGGCATCGAGAGCCCCCACCTGGCGCCATGGCCAGCCC
CCCAGGCAGCCCTGAAGATGCAGACAAGCTGAGAGAAAGCAGGGAGGGCCGGCAGAGGAGGGAG
GACGACGCTCCAGAGCAGAAGAGGTTGAGGCTGGGGCTGCGAGCGGGAAGCGAGCCCCAGGACG
GAGCCACAACACCACGTCCAGCCCGGGACGAGCGGGACGAGCTCGCCACCCAGACAGGTGGCGA
AGGCAGAAGTGAACAGCTGTCTCTGCCTCCAAGCCTGGTGGAGAGTCAGGTTTTGGTGAGTCCT
CCTGTTGATCAAGCTGAGGAAACTGCTCAAAGACCTCATGAAAGTGGGACTTACGGCTTCCTTG
ATCAGGCTCAGCATTCAGATATCAAAGCCGACTGCAGTAACTGCGTGGAGACAGAGGACAGAAA
GGTTTTGAGGCAACCGATGAATTGTGAAAGAGAGCAGCTGAGGGGTAATCAGGAAGCAGCGGCC
GCCCCTGACACAATGGCTCAGCCTTATGCCTCAGCGCAGTTCGCTCCACCCCAGAATGGCATCC
CTGCAGAATACACGGCCCCTCATCCCCATCCCGCGCCAGAGTACACCGGCCAGACCACTGTCCC
CGACCACACATTAAACCTGTATCCTCCTACACAGACGCACTCGGAGCAGAGCGCTGATACAAGC
GCACAGACCGTCTCCGGCACCGCCACACAGACAGATGATGCCGCCCCGACCGACGGCCAGCCCC
AGACACAACCTTCTGAAAACACAGAAAACAAGTCCCAGCCCAAGCGGCTGCATGTGTCCAACAT
CCCCTTCCGGTTCCGGGATCCAGACCTCCGACAAATGTTTGGCCAATTTGGTAAAATATTAGAT
GTTGAAATTATTTTTAATGAGCGGGGCTCGAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTG
CGGATGCGGACAGGGCGAGGGAGAAATTGCACGGTACCGTGGTAGAGGGCCGTAAAATCGAGGT
TAATAATGCGACAGCACGCGTGATGACTAATAAAAAGGCCGTGAACCCCTACACCAATGGCTGG
AAATTAAATCCAGTTGTGGGCGCGGTCTACAGCCCCGACTTCTATGCAGGCACGGTGCTGTTGT
GCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGGCCCCAGTTCACTTGTATATACTTCTGC
AATGCCTGGCTTTCCATATCCGGCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCACCTTCGA
GGCCGTGGTCGCACCGTGTACAACACCTTCAGAGCTGCGGCGCCCCCACCCCCAATCCCGGCCT
ATGGCGGTGTTGTTTACCAGGATGGATTTTATGGTGCAGACATTTATGGTGGTTACGCTGCATA
CCGCTACGCCCAGCCCACCCCTGCCACTGCTGCTGCCTACAGTGACAGAAATCAGTTCGTCTTC
GTTGCAACAGATGAAATTTCTTGTAACACCTCGGCAGTTACGGACGAGTTTATGCTGCCGACCC
CTACCACCACACACTTGCTCCAGCCCCCACCTACGGCGTTGGTGCCATGAATGCTTTTGCGCCC
TTGACCGATGCCAAGACTAGGAGCCATGCTGATGATGTGGGTCTCGTTCTTTCTTCATTGCAGG
CTAGTATATACCGAGGGGGATACAACCGTTTTGCTCCATATTAAATGATAAAACCATTAAACAA
ACAAACAAAAAACAAAACAAAAACAAAAAAACCAACCTTCCAATGTGGGGAGAGAGGAAGCTTT
CCGAGGCCCGAGTGTTGCGACACATGCAGTAGGACATCACTTTAGCAACTCAAAGAAACAACTA
AAAAAAAAAAAAATCAAAAAAAAGAGGAAAAATTACATTTTTTATCTTATACCTCAGATATTTT
GTTCTGTGTATTTTAATATTGTGGGTCTTTGGTTTATGAAGGTTTTTGTAGTTCAGTTGCTGGC
TGTAGGAGTTTTTGTGGTTGATCTAGAGAGAGGCTAGATATAAATAAAAACCGATTTAGGGCCA
TATCCAGAGTGCTATATTATGTAAATGGATTATATATGCCGAACATGAAGCTACTGGGGTTACG
CTGTTTGGGAAGACTGTAAGTGGCAAGTCATTCTTTCTGCATCTATATTATTTTATTCTGTGAA
AGGGGAGGCCGGGAGGGGCTTAGGGGTTTGGGACTGGGGTTTGGCTGAAAGGAAAAAAAAAGAA
AATATATATATATATAAATACATATATATAGTAACTGATGAATCTAAATGACCCACTGCACCAA
CTATCATAAATCTATGGTTCGAAGTTACTCCTGGCAAAGGCAAGCCAAAGGCTGTGTTAAGAAT
CTGCTTCTTATAGCACGGAGATTGCAGTTGAACGAAGCTGTGACGGTCCGCCCTCTTATCATTC
CACCGCAGTACGCAGCTTCTTACCTACCCACTAGTTATTTAAGCCAAGGCTACTAGTTAGGCCA
TCAATAAGCATTCTTTTTATATTTCTTCCAGTATGAGAAATTATTGATATCACTGCTGACTTTT
ATATTACGGGAGGGAAAATTAACATTAATAAAAGGTGATAAAAAGCACTGTTTCTATTTTTTTC
TTTTTTTCCAAAAAAGAAAGTAATAAAAACTTAAATTCTTTGTACCAGTTAAAAATATGTATAA
AATTTACATCTGTGCAGTGGAGTTATGTTCTAGAAACAGTCTCTGAGGCTTTAGTTTTAGCTTA
GTAGATTAACTGTTAGAGACAGACGTATAATTTTTATGGAATTACATGATAATCATATCTGGAT
TTATAGTCGCATTTTACAAGTATCGCAATCATTGAATAGAGATAATCACGGTATTTTCATCAGC
TTGATACTTTTTGAAAACATGACTGCGCTGTGAGCAACTTGCAATTTTTCAGTCTGTGAGAGCC
TGCCCTTCCTTCTCCCCAGTGCCCCAGGGTTATGTTAAACTGGTGTCTTTACTTCTATCGCCAA
GGCCCAAGACAATTGTCAGAAGGAAGCAAAAACAAGACAAAAAACAAAACTAGAACCATGCCCT
CCTTCCCCAAAGAGCAGTGTCTGCCGCATCCTTTTCCGGAGCAGGGCCAGAGCAACACAGCCGA
AAAATTGCAGCTTGTGAATTTCTTCTGTTTGAATCCCCCCATGTTGTCCTGTTTACAAGTTAAC
CTAAGTTGGGGTATCTGTCATGGGTCTTCCTGTTTTTGTATTTAAATTCTAAAATATCAGCAAG
CTGTTCCCTGAGTAGTGTTTTTGCCTGTGTGTGCAGTGCCGGCCCCACGGCACGCACTTTAGTA
AGTTATCAACTCACGCTGTGAACCTGCCAATCTGCTGTAACAACTCTGCTTTAAAATCAAAACC
AAACAAAACTTTAAAAAGAAAAAAAAAAGTGTTTGTGATCCAGCTTTTCCTCATCATCCTACGT
GCATGCCCGTAAGATCGGTTGGATATTAAACCATCAATAAAGTTTCATGAGATTTGAAAACAAA
GTTTTCGTAGCTTCGATATCTAAGACAGAGGATCATGGTTTGGGAGAGGAAGAAAAGCAAGGGG
CGAGGAGGGGAAGGGAGAGAGACTGCTGAACTGGTGAGAAGAGGAAAAAAAATCTAGGAACTGG
TCTTCTTTCACCAGACCTCTTTGAGTAGGGAGAGATGGGGCCAGAGGGGGACAGGTTGACAACA
TCACGTTCCCACTCCCCTGGCCTGCTACAGTGCGCACCTGGTTGATGTTACCCAAGGCAACAAT
TTATCATGATGCTGTAGCATTCGACCCCAGATGGGGTCAAGGTAGTAAAAGGAAGGGGCTGCAC
AAAGGTCAACAGACTCCTCCCAGTCGCCCCAGCTTTCCAAGCCTAGAACCTGCATTGTGTATGA
AATCACAAACATGGAATTCTTACTGTGCTGGCTAAAGTAAAACTCATTTGCGGTTTTGATTTCC
ATCAACGAACTGTACTTTCCCCCACGACCGTATGTAGTTTTAATAAAAATCATTTAGAGCAAGT
GGGTGCCAACCGATGTCGCAGAACCTTTTGTCTAGGCACTCCGCTGAGCTGCCGATAAGTCGTT
TTAAACTGTCATGTCAGAGGTGTAAACAAACATTTTGGATTTTTTAAAACAACAGTATTTATTT
GGAATGTTTTCATTTATCTAAATAACTATTGCTATTATGAATTATGGAAAAAAGATTAATGTGG
CATATAGTGACTTCTTAACACACATCACTCAATCTGCAAACCCAGAAAATGTGTATATCTGTCT
TTAGAAATTAGTGTTTATATCACTTACAGTGGTTTGTGAATAAAGAAAACTGGTTTGTAATATC
AAAAAATAAAAGCTTAGTCTGAAAAGGTA

hide sequence

RefSeq Acc Id:

XM_017597211 ⟹ XP_017452700

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,350 - 9,001,811 (-)	NCBI
mRatBN7.2	10	8,156,027 - 8,495,247 (-)	NCBI
Rnor_6.0	10	8,316,785 - 8,657,670 (-)	NCBI

Sequence:

show sequence

CAAGTACCCTGAATTGCTGAGCCATCTCTCCGGTCCCAATTTTGCTGGTCTGTCTGTCACATTT
ATACAATTCCCAAGTTGCCAAAGCACCTGCAGAACTTTGCCCTCACACTCTTCTACATCTGTGT
ACTCAAGATGTACATACGTCAGTTTATGCTCTAAATGAATAAGTTGTGCGTCCTGCTTTCTGCC
ACCACAGCTTTTGCACTTTATAATACCATTGAGCTGTAATTCAGTGTGCCTGGGACCTTCCCTC
AGCACTGAGGAGTGCCTCTGTGTCTTGGTTGTCAACGGGAAGTCAACTAGAAAACATACCTGTT
TCGGGTAATGTGTCTGTCCTTGCTGCTAACTTCTCAGAAATCTGGTTTTGAAAGTCATGGTGAG
AAGCTAAAGTTAGAACCGGTATTGGGCAGTCTTATGAGATGGGTCAGTGTGCAGCTGTTCCAGG
AGCTTTCGGGATTGCACAACATGGCCACTCCGATGCATGTGAATCAATTACAGAGAAACCTTGT
CAAGATGGCCAAACCTCCAGCCTTAAATAATTGAATTCTCTGCCAAACCCTGTCTGCTGTCGTT
ATCTAGAAATGTAATTATGTAGCTAAATCAAGCAACTAAAATTAGTGTAGTGTAAAAACACCTT
GGCTATCTGAAAGTGGACGAATTGACATTGGGCTTAGGGAAAGCCAATAGTTGGGTATGGTGTG
GTGGTGTCTGAAGTTCTCGCTCATCATCATTTTGACAAAATCTATATTGTGCATCCTGTTGAGA
GAGAAAAGTGGTTTGTGGCAAGGGGGTGTCTGATTTGAAGGTGACATTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTCCAGAAGTCAATGTCTGGTAACTTCTTACATTCCTTTCTTTATGTTTTTT
GAGACTGTGTCTCATTGCATACAAATGTCACAGATTCAAGACTAGTTGGCTATGAGCCCCAGGG
ATCCTCTGATCTATGCATAATGAGTGCTAGCATTGTAGGATGGTCCTACCATGCTTATCACAGA
GGTCTTGGGTGTCTGAAGCCAGGCCTTCGAGCTTCCTCAGTATTTTACCAATTGAGCTATCTGC
CAGGCCCTATGAAGGCCATCTTCAATTGTCTTCAGCCCTTACTTCATGAGAGTTCCAGATTGCT
AGTTATGCCCACATATTTCCTGGTATGAAAAGTGGGAACATGCCAGTTGATCATCATCTGAGCC
CTCACATCTGAAGTCAAAGATGGGTGAATACCAACTGTGAGGGGAAGAGCAGAACCGGTGGTGA
TTAACTCCCTCTATTGCACACTGCAAGGAGGTGACGAGATATTCTGACATTGTTACATGCCCAA
ATAGATCTGGAGTCTACGAGGCAAATGAAGTTGCTCGAGACGGTAGAGCTAGGAAAGGGACACC
CCAGCTTTCACTTTGCATACTCCTCAACACCTTTCATCTCTGAAAGCGAGGGTGGTGGGAGGGA
ATTCATCTTTGTTTAATATATAGCAGATTCATGTATCACAGCTGGGACACACATGTAAAAGCCA
TGTGAAATCCCTTCACACATGAACACAGCACCAGCAAGTCTGCACCTACTCTGTGGCCCCCAAG
ATAGCTAACACATTTCTAGATCACAAGTCACAGTGCAATCCAGCAAGACAACTAGGGATTGTGT
ATGAGGTATTTTAAATTCAGCACTGCCTCCTACTGGCTGCAAAGTGGCTGACTAGCGTGCGTTC
GGGTTCCTCATGGTTACTTGGCTTCCTGGGTCCGGGATTAGCCCCTGCTTCAGAGATGTGGAAG
GACTGAGTGCAATAACCCACAAAACTAATTTACTCAGACTTCTGCTATTATTTCCTTTTAGCTA
TGAATTGCCTCTTCAAACTGAAATCGAGTGAAAAAAGGGGAGGAAAGTGAGTCAAATATTTTGA
GACAGTTTCGTGTAGCCCAAGCTCGCCTAAAACTTGCTATACAGCTGAGCTCCCGATTTTCCTA
TACCCACCTCTGAGTTCCAGGACCACTGAGATTTGCTACCACATACTGATTATTCTTAGGTAAT
TTTTGATCAGCTGCCCACATGAACCTGCTACCTTTGAGTGGGTTTTTTGCTGTCATTTTTCTTG
TTGTTGTTCTTGTTTCTTTGTTTGGTTTGGTTTTTGTACATAACTGTGGGGGGATGAGTATAAG
AATGAAAATGTATGTGCAATGTCGAAGGGTGATCTCCAGGTATCTTCCTTTATTGCTTTTTACT
TACGTAAAGAGAGGGTCTTTCACTGAACCACTGAATGTGGAACTTTCTGTTCGGCTATGCTGGC
TCACAGGTGAGACCCAGGATCCTCCTGTCTCCGTCTTCCCAGTGCTGGGAATACACGTGTATGC
CACATTGCTTGACTTCATACACGGGCATTGGAGATCCAAACTTGGGTCCTCATACATATATGAT
AGTCCATAAGTTTACATAACAATCAGTTGCAATTTAGAACTTAAACTTAGGCTCCGGTGATGGT
TTATATAGGTAAAGATTTAAGTTTTCTAAGTTGAAATTGATTGTCCTGTAAGCTTACACATTTC
TATTCATTATTCTCTCTAAAAATCTCATGTAGACCCAGCCCCTTGCAATTTGGCCCAGTTCCTC
AGGACAAATGTCTTTTCTTTTTCCCTGATTCCCTGTCACTCCATCTCCCTCGGTCTGAGAACTA
AATTAATGAAGAGTATTTGGTTAGTCATGTTGGGCGAGCTGCTCCCAAAATAGCTCCTTCCATT
TTGGTAGCTCCGACCCTGCAGCTGCCGCGTCCCTTCCTTGTCTGTGAAGAAAACTTTCACATTA
AGAGTTGCTGATGCAGGATTTTCTTTCCTTTCCCCTCTCCGCCGCCTGTGGATGAGCACTTGGC
TCCTGACAGAAGCGATTTGGCTCTCGGCTTTGTAGTTGAGAAGAAGTTGGGTCTATAGATTTCT
TTCCCCCTCTAACTCTCTATTGATGTGTTCAGCCTTGGAGGGAATAAAGCCTCCATTTAAAGCA
TGTTGGCGTCGCAAGGAGTCCTTCTGCATTCTTATGGCGTGCCTATGGTTGTGCCTGCTGCCCC
CTTCTTCCCGGGACTGATGCAGGGTAATCAGGAAGCAGCGGCCGCCCCTGACACAATGGCTCAG
CCTTATGCCTCAGCGCAGTTCGCTCCACCCCAGAATGGCATCCCTGCAGAATACACGGCCCCTC
ATCCCCATCCCGCGCCAGAGTACACCGGCCAGACCACTGTCCCCGACCACACATTAAACCTGTA
TCCTCCTACACAGACGCACTCGGAGCAGAGCGCTGATACAAGCGCACAGACCGTCTCCGGCACC
GCCACACAGACAGATGATGCCGCCCCGACCGACGGCCAGCCCCAGACACAACCTTCTGAAAACA
CAGAAAACAAGTCCCAGCCCAAGCGGCTGCATGTGTCCAACATCCCCTTCCGGTTCCGGGATCC
AGACCTCCGACAAATGTTTGGCCAATTTGGTAAAATATTAGATGTTGAAATTATTTTTAATGAG
CGGGGCTCGAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCGGATGCGGACAGGGCGAGGG
AGAAATTGCACGGTACCGTGGTAGAGGGCCGTAAAATCGAGGTTAATAATGCGACAGCACGCGT
GATGACTAATAAAAAGGCCGTGAACCCCTACACCAATGGCTGGAAATTAAATCCAGTTGTGGGC
GCGGTCTACAGCCCCGACTTCTATGCAGGCACGGTGCTGTTGTGCCAGGCCAACCAGGAGGGAT
CTTCCATGTACAGTGGCCCCAGTTCACTTGTATATACTTCTGCAATGCCTGGCTTTCCATATCC
GGCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCACCTTCGAGGCCGTGGTCGCACCGTGTAC
AACACCTTCAGAGCTGCGGCGCCCCCACCCCCAATCCCGGCCTATGGCGGAGTAGTGTATCAAG
AGCCAGTGTATGGCAATAAATTGCTACAGGGTGGTTACGCTGCATACCGCTACGCCCAGCCCAC
CCCTGCCACTGCTGCTGCCTACAGTGACAGAAATCAGTTCGTCTTCGTTGCAACAGATGAAATT
TCTTGTAACACCTCGGCAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACACACTTGC
TCCAGCCCCCACCTACGGCGTTGGTGCCATGCCCCAAGGTTCCAGCCCCAGCACAGACTTCAGA
GGAGCTAAGCTGCAGACTTCCAGGCCTCTGCTGTCAGGCAGCTGAGCATCTGCCTGCCTCTCCT
CCCCTTTTACAATTCATGTTTAAAGTCATAGTCGCCCAGGAGAGAAAGTAGACAGAGGGGCACA
CTTTGTGAGTGTGCCTAGTACATAAGAAATTAAGGAATCAGCTGGCTTTGGGGGGGGTCATCTT
GTTTGTTTTGGGTTTTTGGGTTTTTTTTGCAGTTTTTTTTTTTTTTTTGTTTTG

hide sequence

RefSeq Acc Id:

XM_039085809 ⟹ XP_038941737

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,518 - 10,754,648 (-)	NCBI
mRatBN7.2	10	8,156,012 - 10,248,087 (-)	NCBI

RefSeq Acc Id:

XM_039085817 ⟹ XP_038941745

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 10,754,648 (-)	NCBI
mRatBN7.2	10	8,152,198 - 10,248,078 (-)	NCBI

RefSeq Acc Id:

XM_039085822 ⟹ XP_038941750

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,350 - 9,031,413 (-)	NCBI
mRatBN7.2	10	8,156,022 - 8,524,782 (-)	NCBI

RefSeq Acc Id:

XM_039085829 ⟹ XP_038941757

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,350 - 9,031,419 (-)	NCBI
mRatBN7.2	10	8,156,010 - 8,524,787 (-)	NCBI

RefSeq Acc Id:

XM_039085830 ⟹ XP_038941758

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,518 - 9,001,811 (-)	NCBI
mRatBN7.2	10	8,156,021 - 8,495,247 (-)	NCBI

RefSeq Acc Id:

XM_039085833 ⟹ XP_038941761

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,350 - 9,031,412 (-)	NCBI
mRatBN7.2	10	8,156,059 - 8,524,782 (-)	NCBI

RefSeq Acc Id:

XM_039085834 ⟹ XP_038941762

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,001,811 (-)	NCBI
mRatBN7.2	10	8,152,198 - 8,495,247 (-)	NCBI

RefSeq Acc Id:

XM_063268858 ⟹ XP_063124928

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,518 - 9,721,480 (-)	NCBI

RefSeq Acc Id:

XM_063268859 ⟹ XP_063124929

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,350 - 9,721,480 (-)	NCBI

RefSeq Acc Id:

XM_063268860 ⟹ XP_063124930

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,518 - 9,031,412 (-)	NCBI

RefSeq Acc Id:

XM_063268861 ⟹ XP_063124931

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,721,480 (-)	NCBI

RefSeq Acc Id:

XM_063268862 ⟹ XP_063124932

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,518 - 8,845,391 (-)	NCBI

RefSeq Acc Id:

XM_063268863 ⟹ XP_063124933

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,350 - 8,845,391 (-)	NCBI

RefSeq Acc Id:

XM_063268864 ⟹ XP_063124934

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,518 - 8,872,038 (-)	NCBI

RefSeq Acc Id:

XM_063268865 ⟹ XP_063124935

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,518 - 10,193,182 (-)	NCBI

RefSeq Acc Id:

XM_063268866 ⟹ XP_063124936

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,518 - 9,718,650 (-)	NCBI

RefSeq Acc Id:

XM_063268867 ⟹ XP_063124937

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,518 - 9,718,771 (-)	NCBI

RefSeq Acc Id:

XM_063268868 ⟹ XP_063124938

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,011 - 9,718,752 (-)	NCBI

RefSeq Acc Id:

XM_063268869 ⟹ XP_063124939

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,031,407 (-)	NCBI

RefSeq Acc Id:

XM_063268870 ⟹ XP_063124940

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,518 - 9,232,471 (-)	NCBI

RefSeq Acc Id:

XM_063268871 ⟹ XP_063124941

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,350 - 9,232,499 (-)	NCBI

RefSeq Acc Id:

XM_063268872 ⟹ XP_063124942

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,721,480 (-)	NCBI

RefSeq Acc Id:

XM_063268873 ⟹ XP_063124943

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,031,407 (-)	NCBI

RefSeq Acc Id:

XM_063268874 ⟹ XP_063124944

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,718,674 (-)	NCBI

RefSeq Acc Id:

XM_063268875 ⟹ XP_063124945

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,001,811 (-)	NCBI

RefSeq Acc Id:

XM_063268876 ⟹ XP_063124946

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,001,811 (-)	NCBI

RefSeq Acc Id:

XM_063268877 ⟹ XP_063124947

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,031,413 (-)	NCBI

RefSeq Acc Id:

XM_063268878 ⟹ XP_063124948

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 8,845,429 (-)	NCBI

RefSeq Acc Id:

XM_063268879 ⟹ XP_063124949

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,350 - 8,845,416 (-)	NCBI

RefSeq Acc Id:

XM_063268880 ⟹ XP_063124950

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,001,811 (-)	NCBI

RefSeq Acc Id:

XM_063268881 ⟹ XP_063124951

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,031,411 (-)	NCBI

RefSeq Acc Id:

XM_063268882 ⟹ XP_063124952

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,001,811 (-)	NCBI

RefSeq Acc Id:

XM_063268883 ⟹ XP_063124953

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,350 - 9,718,649 (-)	NCBI

RefSeq Acc Id:

XM_063268884 ⟹ XP_063124954

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,718,680 (-)	NCBI

RefSeq Acc Id:

XM_063268885 ⟹ XP_063124955

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,232,499 (-)	NCBI

RefSeq Acc Id:

XM_063268886 ⟹ XP_063124956

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,031,414 (-)	NCBI

RefSeq Acc Id:

XM_063268887 ⟹ XP_063124957

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,718,650 (-)	NCBI

RefSeq Acc Id:

XM_063268888 ⟹ XP_063124958

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 8,845,391 (-)	NCBI

RefSeq Acc Id:

XM_063268889 ⟹ XP_063124959

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 8,845,391 (-)	NCBI

RefSeq Acc Id:

XM_063268890 ⟹ XP_063124960

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,001,811 (-)	NCBI

RefSeq Acc Id:

XM_063268891 ⟹ XP_063124961

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,661,350 - 8,845,391 (-)	NCBI

RefSeq Acc Id:

XM_063268892 ⟹ XP_063124962

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,718,676 (-)	NCBI

RefSeq Acc Id:

XM_063268893 ⟹ XP_063124963

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 9,232,471 (-)	NCBI

RefSeq Acc Id:

XM_063268894 ⟹ XP_063124964

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	8,658,809 - 8,845,391 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100444	(Get FASTA)	NCBI Sequence Viewer
	XP_006245836	(Get FASTA)	NCBI Sequence Viewer
	XP_017452693	(Get FASTA)	NCBI Sequence Viewer
	XP_017452696	(Get FASTA)	NCBI Sequence Viewer
	XP_017452698	(Get FASTA)	NCBI Sequence Viewer
	XP_017452700	(Get FASTA)	NCBI Sequence Viewer
	XP_038941737	(Get FASTA)	NCBI Sequence Viewer
	XP_038941745	(Get FASTA)	NCBI Sequence Viewer
	XP_038941750	(Get FASTA)	NCBI Sequence Viewer
	XP_038941757	(Get FASTA)	NCBI Sequence Viewer
	XP_038941758	(Get FASTA)	NCBI Sequence Viewer
	XP_038941761	(Get FASTA)	NCBI Sequence Viewer
	XP_038941762	(Get FASTA)	NCBI Sequence Viewer
	XP_063124928	(Get FASTA)	NCBI Sequence Viewer
	XP_063124929	(Get FASTA)	NCBI Sequence Viewer
	XP_063124930	(Get FASTA)	NCBI Sequence Viewer
	XP_063124931	(Get FASTA)	NCBI Sequence Viewer
	XP_063124932	(Get FASTA)	NCBI Sequence Viewer
	XP_063124933	(Get FASTA)	NCBI Sequence Viewer
	XP_063124934	(Get FASTA)	NCBI Sequence Viewer
	XP_063124935	(Get FASTA)	NCBI Sequence Viewer
	XP_063124936	(Get FASTA)	NCBI Sequence Viewer
	XP_063124937	(Get FASTA)	NCBI Sequence Viewer
	XP_063124938	(Get FASTA)	NCBI Sequence Viewer
	XP_063124939	(Get FASTA)	NCBI Sequence Viewer
	XP_063124940	(Get FASTA)	NCBI Sequence Viewer
	XP_063124941	(Get FASTA)	NCBI Sequence Viewer
	XP_063124942	(Get FASTA)	NCBI Sequence Viewer
	XP_063124943	(Get FASTA)	NCBI Sequence Viewer
	XP_063124944	(Get FASTA)	NCBI Sequence Viewer
	XP_063124945	(Get FASTA)	NCBI Sequence Viewer
	XP_063124946	(Get FASTA)	NCBI Sequence Viewer
	XP_063124947	(Get FASTA)	NCBI Sequence Viewer
	XP_063124948	(Get FASTA)	NCBI Sequence Viewer
	XP_063124949	(Get FASTA)	NCBI Sequence Viewer
	XP_063124950	(Get FASTA)	NCBI Sequence Viewer
	XP_063124951	(Get FASTA)	NCBI Sequence Viewer
	XP_063124952	(Get FASTA)	NCBI Sequence Viewer
	XP_063124953	(Get FASTA)	NCBI Sequence Viewer
	XP_063124954	(Get FASTA)	NCBI Sequence Viewer
	XP_063124955	(Get FASTA)	NCBI Sequence Viewer
	XP_063124956	(Get FASTA)	NCBI Sequence Viewer
	XP_063124957	(Get FASTA)	NCBI Sequence Viewer
	XP_063124958	(Get FASTA)	NCBI Sequence Viewer
	XP_063124959	(Get FASTA)	NCBI Sequence Viewer
	XP_063124960	(Get FASTA)	NCBI Sequence Viewer
	XP_063124961	(Get FASTA)	NCBI Sequence Viewer
	XP_063124962	(Get FASTA)	NCBI Sequence Viewer
	XP_063124963	(Get FASTA)	NCBI Sequence Viewer
	XP_063124964	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL96249	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000070788
	ENSRNOP00000070788.3
	ENSRNOP00000077105
	ENSRNOP00000077105.2
	ENSRNOP00000082950
	ENSRNOP00000082950.2
	ENSRNOP00000098596
	ENSRNOP00000098596.1
	ENSRNOP00000098601
	ENSRNOP00000098601.2
	ENSRNOP00000098622
	ENSRNOP00000098622.1
	ENSRNOP00000098626
	ENSRNOP00000098626.2
	ENSRNOP00000098630
	ENSRNOP00000098630.2
	ENSRNOP00000098631.2
	ENSRNOP00000098632.2

RefSeq Acc Id:

NP_001100444 ⟸ NM_001106974

- UniProtKB:

A0A8I5ZL88 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLASQGVLLHSYGVPMVVPAAPFFPGLMQGNQEAAAAPDTMAQPYASAQFAPPQNGIPAEYTAP
HPHPAPEYTGQTTVPDHTLNLYPPTQTHSEQSADTSAQTVSGTATQTDDAAPTDGQPQTQPSEN
TENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAR
EKLHGTVVEGRKIEVNNATARVMTNKKAVNPYTNGWKLNPVVGAVYSPDFYAGTVLLCQANQEG
SSMYSGPSSLVYTSAMPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQ
DGFYGADIYGGYAAYRYAQPTPATAAAYSDSYGRVYAADPYHHTLAPAPTYGVGAMNAFAPLTD
AKTRSHADDVGLVLSSLQASIYRGGYNRFAPY

hide sequence

RefSeq Acc Id:	XP_006245836 ⟸ XM_006245774
- Peptide Label:	isoform X21
- UniProtKB:	A0A8I5ZL88 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLASQGVLLHSYGVPMVVPAAPFFPGLMQGNQEAAAAPDTMAQPYASAQFAPPQNGIPAEYTAP HPHPAPEYTGQTTVPDHTLNLYPPTQTHSEQSADTSAQTVSGTATQTDDAAPTDGQPQTQPSEN TENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAR EKLHGTVVEGRKIEVNNATARVMTNKKAVNPYTNGWKLNPVVGAVYSPDFYAGTVLLCQANQEG SSMYSGPSSLVYTSAMPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQ EPVYGNKLLQGGYAAYRYAQPTPATAAAYSDSYGRVYAADPYHHTLAPAPTYGVGAMNAFAPLT DAKTRSHADDVGLVLSSLQASIYRGGYNRFAPY hide sequence

RefSeq Acc Id:

XP_017452698 ⟸ XM_017597209

- Peptide Label:

isoform X5

- Sequence:

show sequence

MASPPGSPEDADKLRESREGRQRREDDAPEQKRLRLGLRAGSEPQDGATTPRPARDERDELATQ
TGGEGRSEQLSLPPSLVESQVLVSPPVDQAEETAQRPHESGTYGFLDQAQHSDIKADCSNCVET
EDRKVLRQPMNCEREQLRGNQEAAAAPDTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPEYTGQ
TTVPDHTLNLYPPTQTHSEQSADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLH
VSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGR
KIEVNNATARVMTNKKAVNPYTNGWKLNPVVGAVYSPDFYAGTVLLCQANQEGSSMYSGPSSLV
YTSAMPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGG
YAAYRYAQPTPATAAAYSDRNQFVFVATDEISCNTSAVTDEFMLPTPTTTHLLQPPPTALVP

hide sequence

RefSeq Acc Id:

XP_017452696 ⟸ XM_017597207

- Peptide Label:

isoform X3

- Sequence:

show sequence

MASPPGSPEDADKLRESREGRQRREDDAPEQKRLRLGLRAGSEPQDGATTPRPARDERDELATQ
TGGEGRSEQLSLPPSLVESQVLVSPPVDQAEETAQRPHESGTYGFLDQAQHSDIKADCSNCVET
EDRKVLRQPMNCEREQLRGNQEAAAAPDTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPEYTGQ
TTVPDHTLNLYPPTQTHSEQSADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLH
VSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGR
KIEVNNATARVMTNKKAVNPYTNGWKLNPVVGAVYSPDFYAGTVLLCQANQEGSSMYSGPSSLV
YTSAMPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGG
YAAYRYAQPTPATAAAYSDSYGRVYAADPYHHTLAPAPTYGVGAMNAFAPLTDAKTRSHADDVG
LVLSSLQASIYRGGYNRFAPY

hide sequence

RefSeq Acc Id:

XP_017452693 ⟸ XM_017597204

- Peptide Label:

isoform X2

- Sequence:

show sequence

MASPPGSPEDADKLRESREGRQRREDDAPEQKRLRLGLRAGSEPQDGATTPRPARDERDELATQ
TGGEGRSEQLSLPPSLVESQVLVSPPVDQAEETAQRPHESGTYGFLDQAQHSDIKADCSNCVET
EDRKVLRQPMNCEREQLRGNQEAAAAPDTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPEYTGQ
TTVPDHTLNLYPPTQTHSEQSADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLH
VSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGR
KIEVNNATARVMTNKKAVNPYTNGWKLNPVVGAVYSPDFYAGTVLLCQANQEGSSMYSGPSSLV
YTSAMPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGG
YAAYRYAQPTPATAAAYSDRNQFVFVATDEISCNTSAVTDEFMLPTPTTTHLLQPPPTALVPCP
KVPAPAQTSEELSCRLPGLCCQAAEHLPASPPLLQFMFKVIVAQERK

hide sequence

RefSeq Acc Id:	XP_017452700 ⟸ XM_017597211
- Peptide Label:	isoform X10
- UniProtKB:	A0A0G2JYU0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLASQGVLLHSYGVPMVVPAAPFFPGLMQGNQEAAAAPDTMAQPYASAQFAPPQNGIPAEYTAP HPHPAPEYTGQTTVPDHTLNLYPPTQTHSEQSADTSAQTVSGTATQTDDAAPTDGQPQTQPSEN TENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAR EKLHGTVVEGRKIEVNNATARVMTNKKAVNPYTNGWKLNPVVGAVYSPDFYAGTVLLCQANQEG SSMYSGPSSLVYTSAMPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQ EPVYGNKLLQGGYAAYRYAQPTPATAAAYSDRNQFVFVATDEISCNTSAVTDEFMLPTPTTTHL LQPPPTALVPCPKVPAPAQTSEELSCRLPGLCCQAAEHLPASPPLLQFMFKVIVAQERK hide sequence

Ensembl Acc Id:

ENSRNOP00000070788 ⟸ ENSRNOT00000082332

Ensembl Acc Id:

ENSRNOP00000059781 ⟸ ENSRNOT00000066534

RefSeq Acc Id:	XP_038941745 ⟸ XM_039085817
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038941762 ⟸ XM_039085834
- Peptide Label:	isoform X31
- UniProtKB:	D3ZSL1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038941757 ⟸ XM_039085829
- Peptide Label:	isoform X20

RefSeq Acc Id:	XP_038941737 ⟸ XM_039085809
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038941758 ⟸ XM_039085830
- Peptide Label:	isoform X22

RefSeq Acc Id:	XP_038941750 ⟸ XM_039085822
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_038941761 ⟸ XM_039085833
- Peptide Label:	isoform X24
- UniProtKB:	A0A0G2JYU0 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000077105 ⟸ ENSRNOT00000100843

Ensembl Acc Id:

ENSRNOP00000082950 ⟸ ENSRNOT00000098537

Ensembl Acc Id:

ENSRNOP00000078589 ⟸ ENSRNOT00000108330

RefSeq Acc Id:	XP_063124931 ⟸ XM_063268861
- Peptide Label:	isoform X11
- UniProtKB:	A0A8I5ZL88 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124942 ⟸ XM_063268872
- Peptide Label:	isoform X23
- UniProtKB:	A0A8I5ZL88 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124954 ⟸ XM_063268884
- Peptide Label:	isoform X37
- UniProtKB:	A0A8I5ZL88 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124962 ⟸ XM_063268892
- Peptide Label:	isoform X45
- UniProtKB:	D3ZSL1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124944 ⟸ XM_063268874
- Peptide Label:	isoform X26
- UniProtKB:	A0A8I5ZL88 (UniProtKB/TrEMBL), A0A8I5ZK82 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124957 ⟸ XM_063268887
- Peptide Label:	isoform X40
- UniProtKB:	D3ZSL1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124955 ⟸ XM_063268885
- Peptide Label:	isoform X38
- UniProtKB:	A0A8I5ZL88 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124963 ⟸ XM_063268893
- Peptide Label:	isoform X46
- UniProtKB:	D3ZSL1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124956 ⟸ XM_063268886
- Peptide Label:	isoform X39
- UniProtKB:	A0A0G2JYU0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124947 ⟸ XM_063268877
- Peptide Label:	isoform X29
- UniProtKB:	D3ZSL1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124951 ⟸ XM_063268881
- Peptide Label:	isoform X34
- UniProtKB:	A0A8I5ZL88 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124939 ⟸ XM_063268869
- Peptide Label:	isoform X17
- UniProtKB:	A0A8I5ZL88 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124943 ⟸ XM_063268873
- Peptide Label:	isoform X25
- UniProtKB:	A0A0G2JYU0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124952 ⟸ XM_063268882
- Peptide Label:	isoform X35
- UniProtKB:	A0A8I5ZL88 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124960 ⟸ XM_063268890
- Peptide Label:	isoform X43
- UniProtKB:	A0A0G2JYU0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124950 ⟸ XM_063268880
- Peptide Label:	isoform X33
- UniProtKB:	D3ZSL1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124945 ⟸ XM_063268875
- Peptide Label:	isoform X27
- UniProtKB:	A0A0G2JYU0 (UniProtKB/TrEMBL), A0A8I5ZW73 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124946 ⟸ XM_063268876
- Peptide Label:	isoform X28
- UniProtKB:	A0A0G2JYU0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124948 ⟸ XM_063268878
- Peptide Label:	isoform X30
- UniProtKB:	A0A8I5ZL88 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124964 ⟸ XM_063268894
- Peptide Label:	isoform X47
- UniProtKB:	D3ZSL1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124959 ⟸ XM_063268889
- Peptide Label:	isoform X42

RefSeq Acc Id:	XP_063124958 ⟸ XM_063268888
- Peptide Label:	isoform X41
- UniProtKB:	A0A8I5ZL88 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124938 ⟸ XM_063268868
- Peptide Label:	isoform X16

RefSeq Acc Id:	XP_063124929 ⟸ XM_063268859
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063124953 ⟸ XM_063268883
- Peptide Label:	isoform X36
- UniProtKB:	A0A0G2JYU0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124941 ⟸ XM_063268871
- Peptide Label:	isoform X19

RefSeq Acc Id:	XP_063124949 ⟸ XM_063268879
- Peptide Label:	isoform X32

RefSeq Acc Id:	XP_063124961 ⟸ XM_063268891
- Peptide Label:	isoform X44
- UniProtKB:	A0A0G2JYU0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124933 ⟸ XM_063268863
- Peptide Label:	isoform X13

RefSeq Acc Id:	XP_063124935 ⟸ XM_063268865
- Peptide Label:	isoform X15

RefSeq Acc Id:	XP_063124928 ⟸ XM_063268858
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063124937 ⟸ XM_063268867
- Peptide Label:	isoform X15

RefSeq Acc Id:	XP_063124936 ⟸ XM_063268866
- Peptide Label:	isoform X15

RefSeq Acc Id:	XP_063124940 ⟸ XM_063268870
- Peptide Label:	isoform X18

RefSeq Acc Id:	XP_063124930 ⟸ XM_063268860
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063124934 ⟸ XM_063268864
- Peptide Label:	isoform X14

RefSeq Acc Id:	XP_063124932 ⟸ XM_063268862
- Peptide Label:	isoform X12

Ensembl Acc Id:

ENSRNOP00000098631 ⟸ ENSRNOT00000121090

Ensembl Acc Id:

ENSRNOP00000098622 ⟸ ENSRNOT00000121081

Ensembl Acc Id:

ENSRNOP00000098630 ⟸ ENSRNOT00000121089

Ensembl Acc Id:

ENSRNOP00000098596 ⟸ ENSRNOT00000121044

Ensembl Acc Id:

ENSRNOP00000098601 ⟸ ENSRNOT00000121049

Ensembl Acc Id:

ENSRNOP00000098626 ⟸ ENSRNOT00000121085

Ensembl Acc Id:

ENSRNOP00000098632 ⟸ ENSRNOT00000121091

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZSL1-F1-model_v2	AlphaFold	D3ZSL1	1-416	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696956

Promoter ID:

EPDNEW_R7481

Type:

initiation region

Name:

Rbfox1_1

Description:

RNA binding fox-1 homolog 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	10	8,654,828 - 8,654,888	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311210	AgrOrtholog
BioCyc Gene	G2FUF-26074	BioCyc
Ensembl Genes	ENSRNOG00000002827	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000082332	ENTREZGENE
	ENSRNOT00000082332.4	UniProtKB/TrEMBL
	ENSRNOT00000098537	ENTREZGENE
	ENSRNOT00000098537.3	UniProtKB/TrEMBL
	ENSRNOT00000100843	ENTREZGENE
	ENSRNOT00000100843.3	UniProtKB/TrEMBL
	ENSRNOT00000121044	ENTREZGENE
	ENSRNOT00000121044.2	UniProtKB/TrEMBL
	ENSRNOT00000121049	ENTREZGENE
	ENSRNOT00000121049.2	UniProtKB/TrEMBL
	ENSRNOT00000121081	ENTREZGENE
	ENSRNOT00000121081.2	UniProtKB/TrEMBL
	ENSRNOT00000121085	ENTREZGENE
	ENSRNOT00000121085.2	UniProtKB/TrEMBL
	ENSRNOT00000121089	ENTREZGENE
	ENSRNOT00000121089.2	UniProtKB/TrEMBL
	ENSRNOT00000121090.2	UniProtKB/TrEMBL
	ENSRNOT00000121091.2	UniProtKB/TrEMBL
Gene3D-CATH	3.30.70.330	UniProtKB/TrEMBL
InterPro	Fox-1_C_dom	UniProtKB/TrEMBL
	FOX1_RRM	UniProtKB/TrEMBL
	Nucleotide-bd_a/b_plait_sf	UniProtKB/TrEMBL
	RBD_domain_sf	UniProtKB/TrEMBL
	RBFOX1-like	UniProtKB/TrEMBL
	RNA-bd_9/Ataxin-2-bd	UniProtKB/TrEMBL
	RRM_RNP1	UniProtKB/TrEMBL
NCBI Gene	302920	ENTREZGENE
PANTHER	ATAXIN 2-BINDING PROTEIN 1-RELATED	UniProtKB/TrEMBL
	RNA BINDING PROTEIN FOX-1 HOMOLOG 1	UniProtKB/TrEMBL
Pfam	Fox-1_C	UniProtKB/TrEMBL
	RRM_1	UniProtKB/TrEMBL
PhenoGen	Rbfox1	PhenoGen
PIRSF	Ataxin_2_bd_A2BP	UniProtKB/TrEMBL
PROSITE	RRM	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000002827	RatGTEx
SMART	RRM	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54928	UniProtKB/TrEMBL
UniProt	A0A0G2JYU0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZK82	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZL88	ENTREZGENE
	A0A8I5ZW73	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0KWD8_RAT	UniProtKB/TrEMBL
	A0ABK0L3M5_RAT	UniProtKB/TrEMBL
	A0ABK0L469_RAT	UniProtKB/TrEMBL
	A0ABK0L4A1_RAT	UniProtKB/TrEMBL
	A0ABK0LAL5_RAT	UniProtKB/TrEMBL
	A0ABK0LBV1_RAT	UniProtKB/TrEMBL
	A0ABK0LEW2_RAT	UniProtKB/TrEMBL
	D3ZSL1	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-09-28	Rbfox1	RNA binding fox-1 homolog 1	Rbfox1	RNA binding protein, fox-1 homolog 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2016-04-27	Rbfox1	RNA binding protein, fox-1 homolog 1	Rbfox1	RNA binding protein, fox-1 homolog (C. elegans) 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2011-07-28	Rbfox1	RNA binding protein, fox-1 homolog (C. elegans) 1	A2bp1	ataxin 2 binding protein 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2007-12-12	A2bp1	ataxin 2 binding protein 1	Boll_predicted	bol, boule-like (Drosophila) (predicted)	Symbol and Name updated to reflect Human and Mouse nomenclature	1299863	APPROVED
2005-01-12	Boll_predicted	bol, boule-like (Drosophila) (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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