Tspan17 (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 17 | 9,824,353 - 9,831,985 (-) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 17 | 9,823,990 - 9,831,974 (-) | Ensembl | | | | GRCr8 | mRatBN7.2 | 17 | 9,819,212 - 9,826,851 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 17 | 9,819,202 - 9,826,834 (-) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 17 | 9,833,113 - 9,840,689 (-) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 17 | 382,017 - 389,821 (-) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 17 | 9,829,519 - 9,837,095 (-) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 17 | 10,356,980 - 10,364,614 (-) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 17 | 10,356,936 - 10,364,570 (-) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 17 | 12,482,938 - 12,490,604 (-) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 17 | 15,879,925 - 15,887,485 (-) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 17 | 9,894,623 - 9,902,091 (-) | NCBI | | Celera | | | RGSC_v3.1 | 17 | 15,879,924 - 15,887,485 (-) | NCBI | | | | | Cytogenetic Map | 17 | p14 | NCBI | | | | |
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TSPAN17 (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 5 | 176,647,484 - 176,659,051 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 5 | 176,647,387 - 176,659,058 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 5 | 176,074,485 - 176,086,052 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 5 | 176,006,994 - 176,018,665 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 5 | 176,006,993 - 176,018,664 | NCBI | | | | | Celera | 5 | 172,414,193 - 172,425,864 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | q35.2 | NCBI | | | | | HuRef | 5 | 170,998,402 - 171,010,074 (+) | NCBI | | HuRef | | | CHM1_1 | 5 | 175,506,822 - 175,518,493 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 5 | 177,194,072 - 177,205,640 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Tspan17 (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 13 | 54,936,915 - 54,944,588 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 13 | 54,937,190 - 54,944,589 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 13 | 54,789,102 - 54,796,775 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 13 | 54,789,377 - 54,796,776 (+) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 13 | 54,890,766 - 54,898,136 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 13 | 54,799,083 - 54,806,390 (+) | NCBI | | MGSCv36 | mm8 | | MGSCv36 | 13 | 54,268,072 - 54,275,379 (+) | NCBI | | MGSCv36 | mm8 | | Cytogenetic Map | 13 | B1 | NCBI | | | | | cM Map | 13 | 29.41 | NCBI | | | | |
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Tspan17 (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955408 | 28,913,871 - 28,922,489 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955408 | 28,914,392 - 28,924,352 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TSPAN17 (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 4 | 171,727,245 - 171,742,257 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 5 | 169,866,781 - 169,881,794 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 5 | 171,944,792 - 171,959,797 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 5 | 179,015,641 - 179,030,941 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 5 | 179,015,641 - 179,030,941 (+) | Ensembl | | | panPan2 | panpan1.1 |
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TSPAN17 (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 4 | 36,683,707 - 36,694,204 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 4 | 36,685,337 - 36,694,183 (-) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 4 | 36,650,545 - 36,661,054 (-) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 4 | 37,049,840 - 37,060,355 (-) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 4 | 37,049,854 - 37,060,409 (-) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 4 | 36,875,789 - 36,886,297 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 4 | 37,063,448 - 37,073,958 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 4 | 37,571,638 - 37,582,147 (-) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Tspan17 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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TSPAN17 (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 2 | 81,260,281 - 81,276,636 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 81,256,989 - 81,276,638 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 82,863,392 - 82,878,248 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TSPAN17 (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 23 | 78,654,954 - 78,667,299 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 23 | 78,655,055 - 78,667,462 (+) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666075 | 9,812,533 - 9,824,230 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Tspan17 (Heterocephalus glaber - naked mole-rat) |
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Tspan17 (Rattus rattus - black rat) |
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