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Gene: Fam20b (FAM20B, glycosaminoglycan xylosylkinase) Rattus norvegicus

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Symbol:

Fam20b

Name:

FAM20B, glycosaminoglycan xylosylkinase

RGD ID:

1311162

Description:

Predicted to enable phosphotransferase activity, alcohol group as acceptor. Predicted to be involved in proteoglycan biosynthetic process. Predicted to be located in cytoplasm. Predicted to colocalize with Golgi apparatus. Orthologous to human FAM20B (FAM20B glycosaminoglycan xylosylkinase); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

family with sequence similarity 20, member B; glycosaminoglycan xylosylkinase; LOC304885; RGD1311162; similar to RIKEN cDNA C530043G21 gene

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	FAM20B (FAM20B glycosaminoglycan xylosylkinase)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Fam20b (FAM20B, glycosaminoglycan xylosylkinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Fam20b (FAM20B glycosaminoglycan xylosylkinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	FAM20B (FAM20B glycosaminoglycan xylosylkinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	FAM20B (FAM20B glycosaminoglycan xylosylkinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Fam20b (FAM20B glycosaminoglycan xylosylkinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	FAM20B (FAM20B glycosaminoglycan xylosylkinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	FAM20B (FAM20B glycosaminoglycan xylosylkinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Fam20b (FAM20B glycosaminoglycan xylosylkinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Fam20b (FAM20B glycosaminoglycan xylosylkinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	FAM20B (FAM20B glycosaminoglycan xylosylkinase)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Fam20b (FAM20B, glycosaminoglycan xylosylkinase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	fam20b (FAM20B glycosaminoglycan xylosylkinase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG3631	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG3631	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	fam20b	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	fam20b	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	71,351,834 - 71,390,192 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	71,351,834 - 71,387,882 (-)	Ensembl				GRCr8
mRatBN7.2	13	68,801,663 - 68,839,979 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	68,801,669 - 68,839,915 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	71,388,458 - 71,424,480 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	72,706,506 - 72,742,346 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	69,967,985 - 70,003,825 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	74,280,173 - 74,333,463 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	74,280,173 - 74,331,214 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	79,201,816 - 79,253,951 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	71,877,243 - 71,913,271 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	68,664,936 - 68,700,916 (-)	NCBI		Celera
RGSC_v3.1	13	71,895,045 - 71,917,784 (-)	NCBI
Cytogenetic Map	13	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Desbuquois dysplasia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[b]fluoranthene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP,ISO)

bortezomib (ISO)

butanal (ISO)

C60 fullerene (EXP)

cadmium dichloride (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlordecone (ISO)

chrysene (ISO)

cobalt dichloride (EXP)

Dibutyl phosphate (ISO)

diquat (ISO)

doxorubicin (ISO)

epoxiconazole (ISO)

fenvalerate (EXP)

folic acid (ISO)

formaldehyde (ISO)

genistein (ISO)

gentamycin (EXP)

methyl methanesulfonate (ISO)

N-nitrosodiethylamine (ISO)

paracetamol (EXP)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (ISO)

sodium arsenite (ISO)

sodium dichromate (ISO)

sodium fluoride (ISO)

sulfadimethoxine (EXP)

temozolomide (ISO)

tetraphene (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

tunicamycin (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

proteoglycan biosynthetic process (IBA)

Cellular Component

cytoplasm (IEA,ISO)

Golgi apparatus (IBA,IEA,ISO)

Molecular Function

ATP binding (IEA)

metal ion binding (IEA)

nucleotide binding (IEA)

phosphotransferase activity, alcohol group as acceptor (IBA,IEA,ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:15676076	PMID:16778019	PMID:19473117	PMID:22900076	PMID:24006456	PMID:24270810

Genomics

Comparative Map Data

Fam20b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	71,351,834 - 71,390,192 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	71,351,834 - 71,387,882 (-)	Ensembl				GRCr8
mRatBN7.2	13	68,801,663 - 68,839,979 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	68,801,669 - 68,839,915 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	71,388,458 - 71,424,480 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	72,706,506 - 72,742,346 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	69,967,985 - 70,003,825 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	74,280,173 - 74,333,463 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	74,280,173 - 74,331,214 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	79,201,816 - 79,253,951 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	71,877,243 - 71,913,271 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	68,664,936 - 68,700,916 (-)	NCBI		Celera
RGSC_v3.1	13	71,895,045 - 71,917,784 (-)	NCBI
Cytogenetic Map	13	q22	NCBI

FAM20B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	179,017,334 - 179,076,567 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	179,025,804 - 179,076,567 (+)	Ensembl			hg38	GRCh38
GRCh37	1	178,994,939 - 179,045,702 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	177,261,697 - 177,312,321 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	1	175,726,730 - 175,777,354	NCBI
Celera	1	152,103,945 - 152,154,570 (+)	NCBI		Celera
Cytogenetic Map	1	q25.2	NCBI
HuRef	1	150,222,685 - 150,273,286 (+)	NCBI		HuRef
CHM1_1	1	180,418,783 - 180,469,380 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	178,372,430 - 178,431,587 (+)	NCBI		T2T-CHM13v2.0

Fam20b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	156,506,127 - 156,547,204 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	156,506,102 - 156,546,656 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	156,678,562 - 156,719,095 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	156,678,532 - 156,719,086 (-)	Ensembl			mm10	GRCm38
MGSCv37	1	158,608,702 - 158,649,041 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	158,517,722 - 158,555,678 (-)	NCBI		MGSCv36	mm8
Celera	1	159,069,457 - 159,113,573 (-)	NCBI		Celera
Cytogenetic Map	1	G3	NCBI
cM Map	1	67.71	NCBI

Fam20b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	18,357,036 - 18,401,240 (+)	Ensembl
ChiLan1.0	NW_004955406	18,357,394 - 18,400,743 (+)	NCBI	ChiLan1.0	ChiLan1.0

FAM20B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	70,683,597 - 70,737,182 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	70,348,000 - 70,401,575 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	154,510,050 - 154,558,868 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	158,217,079 - 158,249,897 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	158,217,079 - 158,249,897 (+)	Ensembl			panPan2	panpan1.1

FAM20B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	20,753,959 - 20,794,538 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	20,757,145 - 20,794,538 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	20,278,423 - 20,319,327 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	20,490,401 - 20,531,493 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	20,490,454 - 20,530,600 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	20,397,558 - 20,438,460 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	20,505,728 - 20,546,645 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	20,640,414 - 20,681,477 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Fam20b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	92,030,223 - 92,081,245 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936481	9,876,995 - 9,928,012 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936481	9,876,970 - 9,928,000 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FAM20B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	120,809,964 - 120,854,961 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	120,809,706 - 120,854,967 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	132,585,032 - 132,629,522 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FAM20B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	50,276,015 - 50,321,567 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	50,272,414 - 50,304,471 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666055	51,801,133 - 51,850,251 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fam20b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624771	3,304,709 - 3,345,525 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624771	3,305,502 - 3,345,579 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Fam20b
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	10	36,030,304 - 36,053,770 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Fam20b
238 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	409
Count of miRNA genes:	231
Interacting mature miRNAs:	285
Transcripts:	ENSRNOT00000006018
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1298066	Bp159	Blood pressure QTL 159		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	48639634	93639634	Rat
10755495	Bp387	Blood pressure QTL 387	3.78		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	37216241	90057603	Rat
1354655	Bp241	Blood pressure QTL 241	3.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	38975045	103588154	Rat
70220	Bp55	Blood pressure QTL 55	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	39924693	84924693	Rat
71119	Thym2	Thymus enlargement QTL 2	3.8		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	13	48749814	87285480	Rat
4889861	Pur29	Proteinuria QTL 29	13.8	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	13	39968211	83286298	Rat
2293687	Bss26	Bone structure and strength QTL 26	4.6	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	13	67635937	109350286	Rat
619615	Bp80	Blood pressure QTL 80		0.0354	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	7421791	87286911	Rat
61340	Bp25	Blood pressure QTL 25	4.2	0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	37087983	82087983	Rat
1581573	Uae36	Urinary albumin excretion QTL 36			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	6002008	88706694	Rat
1549897	Stresp12	Stress response QTL 12	3.35		stress-related behavior trait (VT:0010451)	number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)	13	40983585	85983585	Rat
724564	Uae11	Urinary albumin excretion QTL 11	5.7		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	13	47354258	94285672	Rat
7207885	Glom27	Glomerulus QTL 27	3.9		kidney glomerulus integrity trait (VT:0010546)	kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)	13	21120177	109350286	Rat
738027	Lnnr6	Liver neoplastic nodule remodeling QTL 6	3.3		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	13	65613454	109350286	Rat
7387280	Uae43	Urinary albumin excretion QTL 43	5.69	0.4174	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	68983334	109350286	Rat
738026	Lnnr5	Liver neoplastic nodule remodeling QTL 5	3.29		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	13	62424592	88113509	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	13	33794096	78794096	Rat
2293702	Bss34	Bone structure and strength QTL 34	4.61	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	13	67635937	109350286	Rat
61349	Bp31	Blood pressure QTL 31	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	39924693	84924693	Rat
1576318	Schws5	Schwannoma susceptibility QTL 5		0.0351	nervous system integrity trait (VT:0010566)	post-insult time to trigeminal nerve neurilemmoma formation (CMO:0002019)	13	64497900	109350286	Rat
2303563	Bw89	Body weight QTL 89	6		body mass (VT:0001259)	body weight (CMO:0000012)	13	34834947	79834947	Rat
1354621	Rf47	Renal function QTL 47	3.7		kidney renin amount (VT:0010559)	kidney renin level (CMO:0002166)	13	11081740	103588154	Rat
1581554	Pur11	Proteinuria QTL 11			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	6002008	88706694	Rat
12879477	Bp401	Blood pressure QTL 401			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	39814726	84814726	Rat
1331750	Bp220	Blood pressure QTL 220	2.98		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	39968211	84968211	Rat
12879475	Bp400	Blood pressure QTL 400			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	64375743	109350286	Rat
11530006	Niddm72	Non-insulin dependent diabetes mellitus QTL 72		0.001	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	13	38286298	83286298	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	1	103588154	Rat
2293341	Glom15	Glomerulus QTL 15	9.1		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	13	67635937	109350286	Rat

Markers in Region

D13Got50

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	68,812,686 - 68,812,819 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	74,291,196 - 74,291,328	NCBI	Rnor6.0
Rnor_5.0	13	79,212,839 - 79,212,971	UniSTS	Rnor5.0
RGSC_v3.4	13	71,888,265 - 71,888,398	RGD	RGSC3.4
RGSC_v3.4	13	71,888,266 - 71,888,398	UniSTS	RGSC3.4
Celera	13	68,675,960 - 68,676,092	UniSTS
RGSC_v3.1	13	71,902,453 - 71,902,586	RGD
Cytogenetic Map	13	q22	UniSTS

RH132874

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	68,803,818 - 68,804,002 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	74,282,329 - 74,282,512	NCBI	Rnor6.0
Rnor_5.0	13	79,203,972 - 79,204,155	UniSTS	Rnor5.0
RGSC_v3.4	13	71,879,399 - 71,879,582	UniSTS	RGSC3.4
Celera	13	68,667,092 - 68,667,275	UniSTS
Cytogenetic Map	13	q22	UniSTS

BI274170

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	68,801,979 - 68,802,149 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	74,280,490 - 74,280,659	NCBI	Rnor6.0
Rnor_5.0	13	79,202,133 - 79,202,302	UniSTS	Rnor5.0
RGSC_v3.4	13	71,877,560 - 71,877,729	UniSTS	RGSC3.4
Celera	13	68,665,253 - 68,665,422	UniSTS
RH 3.4 Map	13	393.7	UniSTS
Cytogenetic Map	13	q22	UniSTS

BI282517

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	68,801,762 - 68,801,926 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	74,280,273 - 74,280,436	NCBI	Rnor6.0
Rnor_5.0	13	79,201,916 - 79,202,079	UniSTS	Rnor5.0
RGSC_v3.4	13	71,877,343 - 71,877,506	UniSTS	RGSC3.4
Celera	13	68,665,036 - 68,665,199	UniSTS
RH 3.4 Map	13	375.2	UniSTS
Cytogenetic Map	13	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107187	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001443615	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250059	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598811	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090749	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090750	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272331	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473958	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ758730	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000006018 ⟹ ENSRNOP00000006018

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	71,351,834 - 71,387,882 (-)	Ensembl
mRatBN7.2 Ensembl	13	68,801,669 - 68,839,915 (-)	Ensembl
Rnor_6.0 Ensembl	13	74,280,173 - 74,331,214 (-)	Ensembl

RefSeq Acc Id:

NM_001107187 ⟹ NP_001100657

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	71,351,834 - 71,387,882 (-)	NCBI
mRatBN7.2	13	68,801,663 - 68,837,712 (-)	NCBI
Rnor_6.0	13	74,280,173 - 74,331,214 (-)	NCBI
Rnor_5.0	13	79,201,816 - 79,253,951 (-)	NCBI
RGSC_v3.4	13	71,877,243 - 71,913,271 (-)	RGD
Celera	13	68,664,936 - 68,700,916 (-)	RGD

Sequence:

show sequence

AGGACATGAATTAGCTCCCTTTGACTACCATTTCAGCCTGAAGCCAGAAACTTCAGCCTTCAGA
TTGATTTCACACCTGGAACCGTGGAGGTGCTGCAGTGAAGAAATGTGTAATCATGGAGTCTCCT
TGCTAATCGTCGCCACCTGTCCCCCGTGATAAGCCGGCAGGGACCAGCAGGGACGTGGGTCGAG
GAGGAGAGGCCACCATGAAGCTGAAGCAGCGGGTTGTGGTGTTAGCAATCCTGCTCGTCATTTT
TATCTTCACCAAAGTGTTCCTGATAGACAATTTAGACACATCAGCTGCCAACCGAGAGGACCAG
AGGGCGTTTCACCGCATGATGACCGGCTTGCGGGTGGAGCTGGTGCCCAAGCTGGACCACACCC
TGCAGTCTCCTTGGGAGATTGCAGCCCAGTGGGTGGTGCCCCGGGAAGTGTACCCTGAAGAGAC
CCCAGAGCTGGGAGCAGTCATGCATGCCATGGCCACTAAGAAAATCATCAAAGCTGACGTGGGC
TACAAAGGGACACAGCTGAAAGCTTTACTGACTCTTGAAGGAGGACAGAAAGTTGTCTTCAAGC
CTAAGCGGTACAGCAGAGACTATGTGGTAGAAGGGGAGCCATACGCTGGTTACGACAGACACAA
CGCAGAGGTGGCGGCCTTCCATTTGGACAGGATTCTGGGTTTCCGCCGAGCTCCCTTGGTCGTT
GGCAGATATGTTAACCTGCGAACAGAAGTTAAGCCTGTGGCCACGGAGCAGCTGCTCAGCACCT
TCCTCACTGTAGGAAACAATACTTGTTTCTATGGGAAGTGCTACTATTGCCGAGAAACAGAGCC
AGCATGTGCTGATGGAGACATGATGGAGGGCTCCATCACACTTTGGCTTCCAGATGTGTGGCCT
CTGCAGAAGCATCGGCATCCCTGGGGCAGGACTTACCGAGAGGGCAAATTGGCCAGGTGGGAAT
ATGACGAGAGTTACTGCGACGCTGTGAAGAAAACATCCCCCTATGACTCAGGCCCACGCCTCCT
CGACATCATTGACACGGCTGTCTTTGATTACTTGATTGGCAACGCTGACCGCCATCACTATGAA
AGCTTTCAAGATGACGAAGGCGCTAGCATGCTTATTCTTCTGGATAATGCCAAAAGCTTTGGGA
ACCCCTCGCTGGATGAGAGAAGCATCCTTGCCCCTCTCTATCAGTGTTGCATCATTCGGGTTTC
AACTTGGAATAGACTGAATTATCTAAAGAATGGAGTACTAAAGTCTGCCTTAAAATCTGCCATG
GCCCATGACCCCATCGCCCCTGTGCTCTCCGATCCACACTTGGACACTGTGGACCAGCGGCTTC
TGAATGTCCTGGCCACCATCAAGCAGTGTACCGACCAGTTTGGGATGGATACTGTGCTGGTGGA
AGACAGGATGCCTCTCTCCCACTTGTAACTCTCAAACAAGTGGAACTGATTTTTACAAAGATAG
AGAAACAGCACAATCAATTCCAAATGGCATGTGATGGCCTGCAAGTGGCCACAGCAGGTGCTGG
TGATAGAAGACGTGGCCCTGGGAGTGCTCGGTGTTTTCTGCAGTGCAAGCTAAAGGCCACAGAT
CAGCAGGGCGTCTGTGCGGGGTCAGCTCTCAAACTCAGACAGCCACTCTGCCCAGTCTTCGTTA
CCACCCACACCAGAGGACTGGCAGGTTGATATCGGCTAAGGAATGGGTTCCAGAGTATGTGTCT
GGGGCTAGCCTTGCTCTCCTTTCTCACAGCCATGGATTCTCTGAAAACACTTTGTAGTCCCTGT
GTCTTTAAAAAACAAAAAACCAGAACTAGTCAGATTGAAAAACAGACTGTTCCTCCAGAGTGGC
ATCAGACAGAATAGCAGTCTGCTCCGGGAAACCCGTTTTTAGGGTAGATTGGAGGATGGGGAAG
GGCAGGAAGATCTTGGAACTCTAGGCTATTGAGTAGCATGGATTTGACATCTCAGGGAAGAGAA
GAGGGAGGGGCTCACTCTATAGAACCAGGAAGATAATTGACTTAGTGAAAACAGCTTCCTCTAG
GGCTTAGGTTCTTAGATATGTCCAAAGCAAACAGTCGTCCCCGGCTATGTTCACACTAACCACA
GTCATCTCTAGAGGAAATATTATTACAACCCAAGCATGATCCTCCATGGACACTAATTTACCCC
ATGCCCACCTTTTGCCCAAAGTTGCAAAACAAATTGAAACTGTGCTCTCTGCCCTCCCCCCACA
CACACCTTTCCCCCCCTTTCAATGGCATTGTTTATTTTGAGGTAGGCTATAGCCTCTTATTGTA
GCCTGTGCTGATCCGGAACTTAACTGTATAACCCAGCTCACTTTGAACTGGCAGCAGTGCCGTG
GCCTCAGCCTTCCCCATGCTAGGATGATAGGTGTGAACTACATGCCCAGCTCTCTCATGTCTGA
AGTGCGCTCACACCCTGTGAGGTGAATGGCTTGTAAGGCATTTGATCAATGGTGCTGTTCCTAG
GAGGTTAGTGGCCTTGTCTGTGCCTTTCTTATGAGAAAGTGTCCTGGTGGCTGGACTAAGCTTG
TGATGTGTGCCCTGCAGGTAACAGAGTGAAAGATTTTAAGCCTCTGAGCCTTGAAACTGAGGAG
ATCACAAAGAGCCTTAATATTTTGGTTCATACCAAATCCAAATTTACTTTCATTCGGAGTTCCG
AGCCCATGGTGTAGTAGAATTCTTCATCTCTGAGTCAGGGTCAGCGTTAGTTCTGTGCTCTGTC
ATTTGATAGGTAAGCAGCTGCCACATGGCTAGGGAATGTGTCTGGGACAGTAGCTGCACTCAGA
CTGTGTTCCCTTGACATCTTGTCCAGTTCTGCACTTATGTCACGAGAAGCCTTTCCACACTGGC
TTGACATTTAATGCCAGCCACAGAGCCTGGCTTGAGGCAACTCCCTTTTGAGTTTATCCCCCTA
CCCCTTCCCGTTTCTCACATTAAAACCTAGTGGCAAGTAACCACTTTTCTCTTTTTTTCTTTTT
TTCTTTTTCTCTTTTTTCTTTTTTTTTCTTTTTCTCTTTTTTTTCTTTTTTTTCAGAGCTGGGG
ACCGAACCCAGGGCCTTGTGCTTGCTAGGCAAGCACTCTACCACTGAGCTAAATCCCCAAGTAA
CCACTTTTAAATGGCATGAAATTAGGAAAATTTGTACATTTAATGTACACTTTGAGGTAGGTTA
AGAAATACTGCATATTTCTTTTTCTAAATTGTGGATATTGAACTTAAGAAAACAAACATTAGCA
CAAAACACTAACATAGTGTTAACAAAGGAGATATTGAGCCGGGCAGTGGTGGCACACCCCTTTA
GTCCTAGCATTCAGGAGGCAGAGACAGGCAGATCTCTGAGTTCAAGGCCAGCCTGGTCTACAGA
GTTCTAGGACCAAACCCAAAAAACAAAAGGAGGTATTAAGTTTCCAGGCTGCTTGCTGTGTACA
TCAAGAAAATTCACAGTTGAATTTTGAGATTAGCTGGTTATTAGCAATTTCTGCCTGGAGCCAG
CAGGGTGGGTGGACAACAGTGCGCCCTCCCCCCATTGCTGATGAAGCTGCAGCTCAGCGTTCCC
TCGGGCACCTCAGTGAAGAGGTGCGCCCAGACAAGCAGCCTCACTCACTCATGTTCCTTCAGAG
CAGTTAGAGAAAAGTCCTCTCACACTTCATTTTCCCACTCATGGCCCTAGAAGGTGCTCAGCTC
CACAGTGGACAGAGTTAGTCAGGGCGGCTCGGCAGTTAGAGTATAAAGTTGTGTTCTAACTGGG
ATTGGACTAAGTTAGGAAAGGTACATTTGAGTGAATTTTGGCGTGGCAGGAGGAGGTCGGCTGT
ATGCTTCCAGCCCCAAATTTATAGACAGAAACAAAGTTCTGTCGGGGAAAAAGAGATATATATT
TTTTAAAGTATTGTAACTCCAGCCTCTTTTTGGGTCGTTTACTGGATTAGGACTGTTACAATCA
AGGCCCTGGGGGATTTCGGTCAGCTCTAAATTAGTTTAGCCAACTGAACCTCTGCATAGATGGA
TGCACTCAATACAAAGCCAAGAAATCCGAATCCATTGCTATTTCCTCCCACTTCTTAAATATAT
ATGTATTCTGAGGTGGAAATGGGGGAGATTTGAATATAGAATTTTTATTCTCAAACTCTACTTA
ATCTAAGGCTGCATTGTACTTTGGGAGAGCTCTAAGCACCTTTAAAACAGTCGTCTCTAATTTG
CTGTAGATGTTTGGTATTTTTTAAGGTTTGTCTCCCTGTTTGCACTCAGGGTTAAAGTGTCAGA
CTAAACTTTTAGAAGAAAATAGAGAAATTCAGGACCTCATTACAGATTATTCAGCAAAGTGGAC
CCTGATGCTTTCTCGATTTCCCCAGTGCTGGAGACAGCATCTCCATCCAAAGAAACACATTTTC
TTTAAAACTCTCACACTGTCTTCTCCCCCCTGCTTCCTGTTCCTTCAGCCTCCCTCCCCTTCCC
TCCCTGATACCTCTGATTATCTTGTGATCACCTGCTGTCGTCACACTCTCCTGAGCCCTGAGAG
CAGGGTTTTGGGATAGGAGGTGGAGGTTTGGGTTAATATGGCCGTGTATGCATTCTACCAAGGA
AAATGTTCTTACGTTGACACAAGGAAGTACTGACTCACTGGCACTGAGAAAGGACTCGGCTACT
TAGGGTTGGCATGCACACCCAGCCTTTCCTGGGCAGCCTGCTAAGCCAGGTGACTGTGTGCTCT
GTGGGGGGCTGGCTCTTCTCCCCTTATTTCTCTAGTCTGGGTGGTGAGTGGGGGCTGTCACTCT
ACTGTCACGGTTTTTAGGACCTAAGGTGATCCTCATAAACTCTTGGGGGAAGCTGGGAGTAACT
TACTGGGAAGCTAATTTATTTGTCTGAAGGGTGGTGGAGGGATCACTGCCCTTTGATCTGCCTA
TGGTTTCCTCTTGGAGCTGTTGTGCAGATAGGGGTTGTACTTGGTAAGACACCAAACAGATTTC
TAATGTGTTCTATGGGTTTCAGTTCTGAAAAAAAAATAAAAGATTTTAATATATTATTG

hide sequence

RefSeq Acc Id:

XM_006250058 ⟹ XP_006250120

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	71,351,840 - 71,390,192 (-)	NCBI
mRatBN7.2	13	68,801,668 - 68,839,915 (-)	NCBI
Rnor_6.0	13	74,280,178 - 74,333,463 (-)	NCBI
Rnor_5.0	13	79,201,816 - 79,253,951 (-)	NCBI

Sequence:

show sequence

AGCGGCCGGGGGCGGTGAGCGCGGCGTGGGGCTGCCCCTCCCCGGAGGCGGCGGGGGCGGCCGG
GGCCGCGCCGCACCGCACCGCGCGGGCGGCTATGGAGCGAGCCTGAGGCCGGCTAGGACATGAA
TTAGCTCCCTTTGACTACCATTTCAGCCTGAAGCCAGAAACTTCAGCCTTCAGATTGATTTCAC
ACCTGGAACCGTGGAGGTGCTGCAGTGAAGAAATGTGTAATCATGGAGTCTCCTTGCTAATCGT
CGCCACCTGTCCCCCGTGATAAGCCGGCAGGGACCAGCAGGGACGTGGGTCGAGGAGGAGAGGC
CACCATGAAGCTGAAGCAGCGGGTTGTGGTGTTAGCAATCCTGCTCGTCATTTTTATCTTCACC
AAAGTGTTCCTGATAGACAATTTAGACACATCAGCTGCCAACCGAGAGGACCAGAGGGCGTTTC
ACCGCATGATGACCGGCTTGCGGGTGGAGCTGGTGCCCAAGCTGGACCACACCCTGCAGTCTCC
TTGGGAGATTGCAGCCCAGTGGGTGGTGCCCCGGGAAGTGTACCCTGAAGAGACCCCAGAGCTG
GGAGCAGTCATGCATGCCATGGCCACTAAGAAAATCATCAAAGCTGACGTGGGCTACAAAGGGA
CACAGCTGAAAGCTTTACTGACTCTTGAAGGAGGACAGAAAGTTGTCTTCAAGCCTAAGCGGTA
CAGCAGAGACTATGTGGTAGAAGGGGAGCCATACGCTGGTTACGACAGACACAACGCAGAGGTG
GCGGCCTTCCATTTGGACAGGATTCTGGGTTTCCGCCGAGCTCCCTTGGTCGTTGGCAGATATG
TTAACCTGCGAACAGAAGTTAAGCCTGTGGCCACGGAGCAGCTGCTCAGCACCTTCCTCACTGT
AGGAAACAATACTTGTTTCTATGGGAAGTGCTACTATTGCCGAGAAACAGAGCCAGCATGTGCT
GATGGAGACATGATGGAGGGCTCCATCACACTTTGGCTTCCAGATGTGTGGCCTCTGCAGAAGC
ATCGGCATCCCTGGGGCAGGACTTACCGAGAGGGCAAATTGGCCAGGTGGGAATATGACGAGAG
TTACTGCGACGCTGTGAAGAAAACATCCCCCTATGACTCAGGCCCACGCCTCCTCGACATCATT
GACACGGCTGTCTTTGATTACTTGATTGGCAACGCTGACCGCCATCACTATGAAAGCTTTCAAG
ATGACGAAGGCGCTAGCATGCTTATTCTTCTGGATAATGCCAAAAGCTTTGGGAACCCCTCGCT
GGATGAGAGAAGCATCCTTGCCCCTCTCTATCAGTGTTGCATCATTCGGGTTTCAACTTGGAAT
AGACTGAATTATCTAAAGAATGGAGTACTAAAGTCTGCCTTAAAATCTGCCATGGCCCATGACC
CCATCGCCCCTGTGCTCTCCGATCCACACTTGGACACTGTGGACCAGCGGCTTCTGAATGTCCT
GGCCACCATCAAGCAGTGTACCGACCAGTTTGGGATGGATACTGTGCTGGTGGAAGACAGGATG
CCTCTCTCCCACTTGTAACTCTCAAACAAGTGGAACTGATTTTTACAAAGATAGAGAAACAGCA
CAATCAATTCCAAATGGCATGTGATGGCCTGCAAGTGGCCACAGCAGGTGCTGGTGATAGAAGA
CGTGGCCCTGGGAGTGCTCGGTGTTTTCTGCAGTGCAAGCTAAAGGCCACAGATCAGCAGGGCG
TCTGTGCGGGGTCAGCTCTCAAACTCAGACAGCCACTCTGCCCAGTCTTCGTTACCACCCACAC
CAGAGGACTGGCAGGTTGATATCGGCTAAGGAATGGGTTCCAGAGTATGTGTCTGGGGCTAGCC
TTGCTCTCCTTTCTCACAGCCATGGATTCTCTGAAAACACTTTGTAGTCCCTGTGTCTTTAAAA
AACAAAAAACCAGAACTAGTCAGATTGAAAAACAGACTGTTCCTCCAGAGTGGCATCAGACAGA
ATAGCAGTCTGCTCCGGGAAACCCGTTTTTAGGGTAGATTGGAGGATGGGGAAGGGCAGGAAGA
TCTTGGAACTCTAGGCTATTGAGTAGCATGGATTTGACATCTCAGGGAAGAGAAGAGGGAGGGG
CTCACTCTATAGAACCAGGAAGATAATTGACTTAGTGAAAACAGCTTCCTCTAGGGCTTAGGTT
CTTAGATATGTCCAAAGCAAACAGTCGTCCCCGGCTATGTTCACACTAACCACAGTCATCTCTA
GAGGAAATATTATTACAACCCAAGCATGATCCTCCATGGACACTAATTTACCCCATGCCCACCT
TTTGCCCAAAGTTGCAAAACAAATTGAAACTGTGCTCTCTGCCCTCCCCCCACACACACCTTTC
CCCCCCTTTCAATGGCATTGTTTATTTTGAGGTAGGCTATAGCCTCTTATTGTAGCCTGTGCTG
ATCCGGAACTTAACTGTATAACCCAGCTCACTTTGAACTGGCAGCAGTGCCGTGGCCTCAGCCT
TCCCCATGCTAGGATGATAGGTGTGAACTACATGCCCAGCTCTCTCATGTCTGAAGTGCGCTCA
CACCCTGTGAGGTGAATGGCTTGTAAGGCATTTGATCAATGGTGCTGTTCCTAGGAGGTTAGTG
GCCTTGTCTGTGCCTTTCTTATGAGAAAGTGTCCTGGTGGCTGGACTAAGCTTGTGATGTGTGC
CCTGCAGGTAACAGAGTGAAAGATTTTAAGCCTCTGAGCCTTGAAACTGAGGAGATCACAAAGA
GCCTTAATATTTTGGTTCATACCAAATCCAAATTTACTTTCATTCGGAGTTCCGAGCCCATGGT
GTAGTAGAATTCTTCATCTCTGAGTCAGGGTCAGCGTTAGTTCTGTGCTCTGTCATTTGATAGG
TAAGCAGCTGCCACATGGCTAGGGAATGTGTCTGGGACAGTAGCTGCACTCAGACTGTGTTCCC
TTGACATCTTGTCCAGTTCTGCACTTATGTCACGAGAAGCCTTTCCACACTGGCTTGACATTTA
ATGCCAGCCACAGAGCCTGGCTTGAGGCAACTCCCTTTTGAGTTTATCCCCCTACCCCTTCCCG
TTTCTCACATTAAAACCTAGTGGCAAGTAACCACTTTTCTCTTTTTTTCTTTTTTTCTTTTTCT
CTTTTTTCTTTTTTTTTCTTTTTCTCTTTTTTTTCTTTTTTTTCAGAGCTGGGGACCGAACCCA
GGGCCTTGTGCTTGCTAGGCAAGCACTCTACCACTGAGCTAAATCCCCAAGTAACCACTTTTAA
ATGGCATGAAATTAGGAAAATTTGTACATTTAATGTACACTTTGAGGTAGGTTAAGAAATACTG
CATATTTCTTTTTCTAAATTGTGGATATTGAACTTAAGAAAACAAACATTAGCACAAAACACTA
ACATAGTGTTAACAAAGGAGATATTGAGCCGGGCAGTGGTGGCACACCCCTTTAGTCCTAGCAT
TCAGGAGGCAGAGACAGGCAGATCTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTTCTAGGAC
CAAACCCAAAAAACAAAAGGAGGTATTAAGTTTCCAGGCTGCTTGCTGTGTACATCAAGAAAAT
TCACAGTTGAATTTTGAGATTAGCTGGTTATTAGCAATTTCTGCCTGGAGCCAGCAGGGTGGGT
GGACAACAGTGCGCCCTCCCCCCATTGCTGATGAAGCTGCAGCTCAGCGTTCCCTCGGGCACCT
CAGTGAAGAGGTGCGCCCAGACAAGCAGCCTCACTCACTCATGTTCCTTCAGAGCAGTTAGAGA
AAAGTCCTCTCACACTTCATTTTCCCACTCATGGCCCTAGAAGGTGCTCAGCTCCACAGTGGAC
AGAGTTAGTCAGGGCGGCTCGGCAGTTAGAGTATAAAGTTGTGTTCTAACTGGGATTGGACTAA
GTTAGGAAAGGTACATTTGAGTGAATTTTGGCGTGGCAGGAGGAGGTCGGCTGTATGCTTCCAG
CCCCAAATTTATAGACAGAAACAAAGTTCTGTCGGGGAAAAAGAGATATATATTTTTTAAAGTA
TTGTAACTCCAGCCTCTTTTTGGGTCGTTTACTGGATTAGGACTGTTACAATCAAGGCCCTGGG
GGATTTCGGTCAGCTCTAAATTAGTTTAGCCAACTGAACCTCTGCATAGATGGATGCACTCAAT
ACAAAGCCAAGAAATCCGAATCCATTGCTATTTCCTCCCACTTCTTAAATATATATGTATTCTG
AGGTGGAAATGGGGGAGATTTGAATATAGAATTTTTATTCTCAAACTCTACTTAATCTAAGGCT
GCATTGTACTTTGGGAGAGCTCTAAGCACCTTTAAAACAGTCGTCTCTAATTTGCTGTAGATGT
TTGGTATTTTTTAAGGTTTGTCTCCCTGTTTGCACTCAGGGTTAAAGTGTCAGACTAAACTTTT
AGAAGAAAATAGAGAAATTCAGGACCTCATTACAGATTATTCAGCAAAGTGGACCCTGATGCTT
TCTCGATTTCCCCAGTGCTGGAGACAGCATCTCCATCCAAAGAAACACATTTTCTTTAAAACTC
TCACACTGTCTTCTCCCCCCTGCTTCCTGTTCCTTCAGCCTCCCTCCCCTTCCCTCCCTGATAC
CTCTGATTATCTTGTGATCACCTGCTGTCGTCACACTCTCCTGAGCCCTGAGAGCAGGGTTTTG
GGATAGGAGGTGGAGGTTTGGGTTAATATGGCCGTGTATGCATTCTACCAAGGAAAATGTTCTT
ACGTTGACACAAGGAAGTACTGACTCACTGGCACTGAGAAAGGACTCGGCTACTTAGGGTTGGC
ATGCACACCCAGCCTTTCCTGGGCAGCCTGCTAAGCCAGGTGACTGTGTGCTCTGTGGGGGGCT
GGCTCTTCTCCCCTTATTTCTCTAGTCTGGGTGGTGAGTGGGGGCTGTCACTCTACTGTCACGG
TTTTTAGGACCTAAGGTGATCCTCATAAACTCTTGGGGGAAGCTGGGAGTAACTTACTGGGAAG
CTAATTTATTTGTCTGAAGGGTGGTGGAGGGATCACTGCCCTTTGATCTGCCTATGGTTTCCTC
TTGGAGCTGTTGTGCAGATAGGGGTTGTACTTGGTAAGACACCAAACAGATTTCTAATGTGTTC
TATGGGTTTCAGTTCTGAAAAAAAAATAAAAGATTTTAATATAT

hide sequence

RefSeq Acc Id:

XM_006250059 ⟹ XP_006250121

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	71,351,840 - 71,390,146 (-)	NCBI
mRatBN7.2	13	68,805,278 - 68,839,979 (-)	NCBI
Rnor_6.0	13	74,280,178 - 74,333,463 (-)	NCBI
Rnor_5.0	13	79,201,816 - 79,253,951 (-)	NCBI

Sequence:

show sequence

AGCGGCCGGGGGCGGTGAGCGCGGCGTGGGGCTGCCCCTCCCCGGAGGCGGCGGGGGCGGCCGG
GGCCGCGCCGCACCGCACCGCGCGGGCGGCTATGGAGCGAGCCTGAGGCCGGCTAGGACATGAA
TTAGCTCCCTTTGACTACCATTTCAGCCTGAAGCCAGAAACTTCAGCCTTCAGATTGATTTCAC
ACCTGTACCACTGGACTCTTGAGCAAAGGCCTGTAGAGTAAGAGGCCATGTTTCCTTCCCTCTG
AATCTATAACGCTCTTGTAGAAGCACTTTACAGTCAAAGGAACCGTGGAGGTGCTGCAGTGAAG
AAATGTGTAATCATGGAGTCTCCTTGCTAATCGTCGCCACCTGTCCCCCGTGATAAGCCGGCAG
GGACCAGCAGGGACGTGGGTCGAGGAGGAGAGGCCACCATGAAGCTGAAGCAGCGGGTTGTGGT
GTTAGCAATCCTGCTCGTCATTTTTATCTTCACCAAAGTGTTCCTGATAGACAATTTAGACACA
TCAGCTGCCAACCGAGAGGACCAGAGGGCGTTTCACCGCATGATGACCGGCTTGCGGGTGGAGC
TGGTGCCCAAGCTGGACCACACCCTGCAGTCTCCTTGGGAGATTGCAGCCCAGTGGGTGGTGCC
CCGGGAAGTGTACCCTGAAGAGACCCCAGAGCTGGGAGCAGTCATGCATGCCATGGCCACTAAG
AAAATCATCAAAGCTGACGTGGGCTACAAAGGGACACAGCTGAAAGCTTTACTGACTCTTGAAG
GAGGACAGAAAGTTGTCTTCAAGCCTAAGCGGTACAGCAGAGACTATGTGGTAGAAGGGGAGCC
ATACGCTGGTTACGACAGACACAACGCAGAGGTGGCGGCCTTCCATTTGGACAGGATTCTGGGT
TTCCGCCGAGCTCCCTTGGTCGTTGGCAGATATGTTAACCTGCGAACAGAAGTTAAGCCTGTGG
CCACGGAGCAGCTGCTCAGCACCTTCCTCACTGTAGGAAACAATACTTGTTTCTATGGGAAGTG
CTACTATTGCCGAGAAACAGAGCCAGCATGTGCTGATGGAGACATGATGGAGGGCTCCATCACA
CTTTGGCTTCCAGATGTGTGGCCTCTGCAGAAGCATCGGCATCCCTGGGGCAGGACTTACCGAG
AGGGCAAATTGGCCAGGTGGGAATATGACGAGAGTTACTGCGACGCTGTGAAGAAAACATCCCC
CTATGACTCAGGCCCACGCCTCCTCGACATCATTGACACGGCTGTCTTTGATTACTTGATTGGC
AACGCTGACCGCCATCACTATGAAAGCTTTCAAGATGACGAAGGCGCTAGCATGCTTATTCTTC
TGGATAATGCCAAAAGCTTTGGGAACCCCTCGCTGGATGAGAGAAGCATCCTTGCCCCTCTCTA
TCAGTGTTGCATCATTCGGGTTTCAACTTGGAATAGACTGAATTATCTAAAGAATGGAGTACTA
AAGTCTGCCTTAAAATCTGCCATGGCCCATGACCCCATCGCCCCTGTGCTCTCCGATCCACACT
TGGACACTGTGGACCAGCGGCTTCTGAATGTCCTGGCCACCATCAAGCAGTGTACCGACCAGTT
TGGGATGGATACTGTGCTGGTGGAAGACAGGATGCCTCTCTCCCACTTGTAACTCTCAAACAAG
TGGAACTGATTTTTACAAAGATAGAGAAACAGCACAATCAATTCCAAATGGCATGTGATGGCCT
GCAAGTGGCCACAGCAGGTGCTGGTGATAGAAGACGTGGCCCTGGGAGTGCTCGGTGTTTTCTG
CAGTGCAAGCTAAAGGCCACAGATCAGCAGGGCGTCTGTGCGGGGTCAGCTCTCAAACTCAGAC
AGCCACTCTGCCCAGTCTTCGTTACCACCCACACCAGAGGACTGGCAGGTTGATATCGGCTAAG
GAATGGGTTCCAGAGTATGTGTCTGGGGCTAGCCTTGCTCTCCTTTCTCACAGCCATGGATTCT
CTGAAAACACTTTGTAGTCCCTGTGTCTTTAAAAAACAAAAAACCAGAACTAGTCAGATTGAAA
AACAGACTGTTCCTCCAGAGTGGCATCAGACAGAATAGCAGTCTGCTCCGGGAAACCCGTTTTT
AGGGTAGATTGGAGGATGGGGAAGGGCAGGAAGATCTTGGAACTCTAGGCTATTGAGTAGCATG
GATTTGACATCTCAGGGAAGAGAAGAGGGAGGGGCTCACTCTATAGAACCAGGAAGATAATTGA
CTTAGTGAAAACAGCTTCCTCTAGGGCTTAGGTTCTTAGATATGTCCAAAGCAAACAGTCGTCC
CCGGCTATGTTCACACTAACCACAGTCATCTCTAGAGGAAATATTATTACAACCCAAGCATGAT
CCTCCATGGACACTAATTTACCCCATGCCCACCTTTTGCCCAAAGTTGCAAAACAAATTGAAAC
TGTGCTCTCTGCCCTCCCCCCACACACACCTTTCCCCCCCTTTCAATGGCATTGTTTATTTTGA
GGTAGGCTATAGCCTCTTATTGTAGCCTGTGCTGATCCGGAACTTAACTGTATAACCCAGCTCA
CTTTGAACTGGCAGCAGTGCCGTGGCCTCAGCCTTCCCCATGCTAGGATGATAGGTGTGAACTA
CATGCCCAGCTCTCTCATGTCTGAAGTGCGCTCACACCCTGTGAGGTGAATGGCTTGTAAGGCA
TTTGATCAATGGTGCTGTTCCTAGGAGGTTAGTGGCCTTGTCTGTGCCTTTCTTATGAGAAAGT
GTCCTGGTGGCTGGACTAAGCTTGTGATGTGTGCCCTGCAGGTAACAGAGTGAAAGATTTTAAG
CCTCTGAGCCTTGAAACTGAGGAGATCACAAAGAGCCTTAATATTTTGGTTCATACCAAATCCA
AATTTACTTTCATTCGGAGTTCCGAGCCCATGGTGTAGTAGAATTCTTCATCTCTGAGTCAGGG
TCAGCGTTAGTTCTGTGCTCTGTCATTTGATAGGTAAGCAGCTGCCACATGGCTAGGGAATGTG
TCTGGGACAGTAGCTGCACTCAGACTGTGTTCCCTTGACATCTTGTCCAGTTCTGCACTTATGT
CACGAGAAGCCTTTCCACACTGGCTTGACATTTAATGCCAGCCACAGAGCCTGGCTTGAGGCAA
CTCCCTTTTGAGTTTATCCCCCTACCCCTTCCCGTTTCTCACATTAAAACCTAGTGGCAAGTAA
CCACTTTTCTCTTTTTTTCTTTTTTTCTTTTTCTCTTTTTTCTTTTTTTTTCTTTTTCTCTTTT
TTTTCTTTTTTTTCAGAGCTGGGGACCGAACCCAGGGCCTTGTGCTTGCTAGGCAAGCACTCTA
CCACTGAGCTAAATCCCCAAGTAACCACTTTTAAATGGCATGAAATTAGGAAAATTTGTACATT
TAATGTACACTTTGAGGTAGGTTAAGAAATACTGCATATTTCTTTTTCTAAATTGTGGATATTG
AACTTAAGAAAACAAACATTAGCACAAAACACTAACATAGTGTTAACAAAGGAGATATTGAGCC
GGGCAGTGGTGGCACACCCCTTTAGTCCTAGCATTCAGGAGGCAGAGACAGGCAGATCTCTGAG
TTCAAGGCCAGCCTGGTCTACAGAGTTCTAGGACCAAACCCAAAAAACAAAAGGAGGTATTAAG
TTTCCAGGCTGCTTGCTGTGTACATCAAGAAAATTCACAGTTGAATTTTGAGATTAGCTGGTTA
TTAGCAATTTCTGCCTGGAGCCAGCAGGGTGGGTGGACAACAGTGCGCCCTCCCCCCATTGCTG
ATGAAGCTGCAGCTCAGCGTTCCCTCGGGCACCTCAGTGAAGAGGTGCGCCCAGACAAGCAGCC
TCACTCACTCATGTTCCTTCAGAGCAGTTAGAGAAAAGTCCTCTCACACTTCATTTTCCCACTC
ATGGCCCTAGAAGGTGCTCAGCTCCACAGTGGACAGAGTTAGTCAGGGCGGCTCGGCAGTTAGA
GTATAAAGTTGTGTTCTAACTGGGATTGGACTAAGTTAGGAAAGGTACATTTGAGTGAATTTTG
GCGTGGCAGGAGGAGGTCGGCTGTATGCTTCCAGCCCCAAATTTATAGACAGAAACAAAGTTCT
GTCGGGGAAAAAGAGATATATATTTTTTAAAGTATTGTAACTCCAGCCTCTTTTTGGGTCGTTT
ACTGGATTAGGACTGTTACAATCAAGGCCCTGGGGGATTTCGGTCAGCTCTAAATTAGTTTAGC
CAACTGAACCTCTGCATAGATGGATGCACTCAATACAAAGCCAAGAAATCCGAATCCATTGCTA
TTTCCTCCCACTTCTTAAATATATATGTATTCTGAGGTGGAAATGGGGGAGATTTGAATATAGA
ATTTTTATTCTCAAACTCTACTTAATCTAAGGCTGCATTGTACTTTGGGAGAGCTCTAAGCACC
TTTAAAACAGTCGTCTCTAATTTGCTGTAGATGTTTGGTATTTTTTAAGGTTTGTCTCCCTGTT
TGCACTCAGGGTTAAAGTGTCAGACTAAACTTTTAGAAGAAAATAGAGAAATTCAGGACCTCAT
TACAGATTATTCAGCAAAGTGGACCCTGATGCTTTCTCGATTTCCCCAGTGCTGGAGACAGCAT
CTCCATCCAAAGAAACACATTTTCTTTAAAACTCTCACACTGTCTTCTCCCCCCTGCTTCCTGT
TCCTTCAGCCTCCCTCCCCTTCCCTCCCTGATACCTCTGATTATCTTGTGATCACCTGCTGTCG
TCACACTCTCCTGAGCCCTGAGAGCAGGGTTTTGGGATAGGAGGTGGAGGTTTGGGTTAATATG
GCCGTGTATGCATTCTACCAAGGAAAATGTTCTTACGTTGACACAAGGAAGTACTGACTCACTG
GCACTGAGAAAGGACTCGGCTACTTAGGGTTGGCATGCACACCCAGCCTTTCCTGGGCAGCCTG
CTAAGCCAGGTGACTGTGTGCTCTGTGGGGGGCTGGCTCTTCTCCCCTTATTTCTCTAGTCTGG
GTGGTGAGTGGGGGCTGTCACTCTACTGTCACGGTTTTTAGGACCTAAGGTGATCCTCATAAAC
TCTTGGGGGAAGCTGGGAGTAACTTACTGGGAAGCTAATTTATTTGTCTGAAGGGTGGTGGAGG
GATCACTGCCCTTTGATCTGCCTATGGTTTCCTCTTGGAGCTGTTGTGCAGATAGGGGTTGTAC
TTGGTAAGACACCAAACAGATTTCTAATGTGTTCTATGGGTTTCAGTTCTGAAAAAAAAATAAA
AGATTTTAATATAT

hide sequence

RefSeq Acc Id:

XM_008769634 ⟹ XP_008767856

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	71,351,840 - 71,389,920 (-)	NCBI
mRatBN7.2	13	68,801,669 - 68,839,726 (-)	NCBI
Rnor_6.0	13	74,280,178 - 74,333,228 (-)	NCBI

Sequence:

show sequence

ATGCGGGGCTCCGGGCGTCCCCGTGAGGCTGCGGGCGATCGGGAGTCCTTGCGGTGACCGGTGC
TCGCTGCTGAGCACGGTCCCCAGAGGCTCTTGGCCCTGGCGTCGTCCTCCTGTCAAGCTAAGCT
GGTGTCGGCGGCCCGGGGAGCCAGTGCGCTTTTGCTGGGTCCCTATGCGGCCCTCCTGGTGGCC
GAGGAGAGCGCTTTCGCTGAGTCCCTACCGGGCCCGCATGGTGGCCGAGGAGAGCGAGTGACCT
GCAGGCCCTGGGCCGGAGAGGGCAGCCGTGTACTGGGGTCGTGCGCTCAGAGCGCCAAGGGGCA
CAACTTGAGATGAGACTGTCCAGAGTGGGCTGCGCTGGCGGTTTCATTTCCGGGTGTGATGGCC
CGGCGATTAAGAGCGAGCCCAGACGTCGCCTTGATGATGAATGTGAACGTTGTCAGGCTGTGTC
CTTGATTGTGGAGTCTGATAAGACATTCTTTTTAATCAGGAGTCAGTGATCTGTCAGGCTTCTG
ATAAAAAGAAGAAAAGCGGGGAACAACAGGGCGTGGATGGTCCTTATACAATTATTTCGTTTAA
AGACTGTGTCTCCAGTAGGATGGGACATGAATTAGCTCCCTTTGACTACCATTTCAGCCTGAAG
CCAGAAACTTCAGCCTTCAGATTGATTTCACACCTGGAACCGTGGAGGTGCTGCAGTGAAGAAA
TGTGTAATCATGGAGTCTCCTTGCTAATCGTCGCCACCTGTCCCCCGTGATAAGCCGGCAGGGA
CCAGCAGGGACGTGGGTCGAGGAGGAGAGGCCACCATGAAGCTGAAGCAGCGGGTTGTGGTGTT
AGCAATCCTGCTCGTCATTTTTATCTTCACCAAAGTGTTCCTGATAGACAATTTAGACACATCA
GCTGCCAACCGAGAGGACCAGAGGGCGTTTCACCGCATGATGACCGGCTTGCGGGTGGAGCTGG
TGCCCAAGCTGGACCACACCCTGCAGTCTCCTTGGGAGATTGCAGCCCAGTGGGTGGTGCCCCG
GGAAGTGTACCCTGAAGAGACCCCAGAGCTGGGAGCAGTCATGCATGCCATGGCCACTAAGAAA
ATCATCAAAGCTGACGTGGGCTACAAAGGGACACAGCTGAAAGCTTTACTGACTCTTGAAGGAG
GACAGAAAGTTGTCTTCAAGCCTAAGCGGTACAGCAGAGACTATGTGGTAGAAGGGGAGCCATA
CGCTGGTTACGACAGACACAACGCAGAGGTGGCGGCCTTCCATTTGGACAGGATTCTGGGTTTC
CGCCGAGCTCCCTTGGTCGTTGGCAGATATGTTAACCTGCGAACAGAAGTTAAGCCTGTGGCCA
CGGAGCAGCTGCTCAGCACCTTCCTCACTGTAGGAAACAATACTTGTTTCTATGGGAAGTGCTA
CTATTGCCGAGAAACAGAGCCAGCATGTGCTGATGGAGACATGATGGAGGGCTCCATCACACTT
TGGCTTCCAGATGTGTGGCCTCTGCAGAAGCATCGGCATCCCTGGGGCAGGACTTACCGAGAGG
GCAAATTGGCCAGGTGGGAATATGACGAGAGTTACTGCGACGCTGTGAAGAAAACATCCCCCTA
TGACTCAGGCCCACGCCTCCTCGACATCATTGACACGGCTGTCTTTGATTACTTGATTGGCAAC
GCTGACCGCCATCACTATGAAAGCTTTCAAGATGACGAAGGCGCTAGCATGCTTATTCTTCTGG
ATAATGCCAAAAGCTTTGGGAACCCCTCGCTGGATGAGAGAAGCATCCTTGCCCCTCTCTATCA
GTGTTGCATCATTCGGGTTTCAACTTGGAATAGACTGAATTATCTAAAGAATGGAGTACTAAAG
TCTGCCTTAAAATCTGCCATGGCCCATGACCCCATCGCCCCTGTGCTCTCCGATCCACACTTGG
ACACTGTGGACCAGCGGCTTCTGAATGTCCTGGCCACCATCAAGCAGTGTACCGACCAGTTTGG
GATGGATACTGTGCTGGTGGAAGACAGGATGCCTCTCTCCCACTTGTAACTCTCAAACAAGTGG
AACTGATTTTTACAAAGATAGAGAAACAGCACAATCAATTCCAAATGGCATGTGATGGCCTGCA
AGTGGCCACAGCAGGTGCTGGTGATAGAAGACGTGGCCCTGGGAGTGCTCGGTGTTTTCTGCAG
TGCAAGCTAAAGGCCACAGATCAGCAGGGCGTCTGTGCGGGGTCAGCTCTCAAACTCAGACAGC
CACTCTGCCCAGTCTTCGTTACCACCCACACCAGAGGACTGGCAGGTTGATATCGGCTAAGGAA
TGGGTTCCAGAGTATGTGTCTGGGGCTAGCCTTGCTCTCCTTTCTCACAGCCATGGATTCTCTG
AAAACACTTTGTAGTCCCTGTGTCTTTAAAAAACAAAAAACCAGAACTAGTCAGATTGAAAAAC
AGACTGTTCCTCCAGAGTGGCATCAGACAGAATAGCAGTCTGCTCCGGGAAACCCGTTTTTAGG
GTAGATTGGAGGATGGGGAAGGGCAGGAAGATCTTGGAACTCTAGGCTATTGAGTAGCATGGAT
TTGACATCTCAGGGAAGAGAAGAGGGAGGGGCTCACTCTATAGAACCAGGAAGATAATTGACTT
AGTGAAAACAGCTTCCTCTAGGGCTTAGGTTCTTAGATATGTCCAAAGCAAACAGTCGTCCCCG
GCTATGTTCACACTAACCACAGTCATCTCTAGAGGAAATATTATTACAACCCAAGCATGATCCT
CCATGGACACTAATTTACCCCATGCCCACCTTTTGCCCAAAGTTGCAAAACAAATTGAAACTGT
GCTCTCTGCCCTCCCCCCACACACACCTTTCCCCCCCTTTCAATGGCATTGTTTATTTTGAGGT
AGGCTATAGCCTCTTATTGTAGCCTGTGCTGATCCGGAACTTAACTGTATAACCCAGCTCACTT
TGAACTGGCAGCAGTGCCGTGGCCTCAGCCTTCCCCATGCTAGGATGATAGGTGTGAACTACAT
GCCCAGCTCTCTCATGTCTGAAGTGCGCTCACACCCTGTGAGGTGAATGGCTTGTAAGGCATTT
GATCAATGGTGCTGTTCCTAGGAGGTTAGTGGCCTTGTCTGTGCCTTTCTTATGAGAAAGTGTC
CTGGTGGCTGGACTAAGCTTGTGATGTGTGCCCTGCAGGTAACAGAGTGAAAGATTTTAAGCCT
CTGAGCCTTGAAACTGAGGAGATCACAAAGAGCCTTAATATTTTGGTTCATACCAAATCCAAAT
TTACTTTCATTCGGAGTTCCGAGCCCATGGTGTAGTAGAATTCTTCATCTCTGAGTCAGGGTCA
GCGTTAGTTCTGTGCTCTGTCATTTGATAGGTAAGCAGCTGCCACATGGCTAGGGAATGTGTCT
GGGACAGTAGCTGCACTCAGACTGTGTTCCCTTGACATCTTGTCCAGTTCTGCACTTATGTCAC
GAGAAGCCTTTCCACACTGGCTTGACATTTAATGCCAGCCACAGAGCCTGGCTTGAGGCAACTC
CCTTTTGAGTTTATCCCCCTACCCCTTCCCGTTTCTCACATTAAAACCTAGTGGCAAGTAACCA
CTTTTCTCTTTTTTTCTTTTTTTCTTTTTCTCTTTTTTCTTTTTTTTTCTTTTTCTCTTTTTTT
TCTTTTTTTTCAGAGCTGGGGACCGAACCCAGGGCCTTGTGCTTGCTAGGCAAGCACTCTACCA
CTGAGCTAAATCCCCAAGTAACCACTTTTAAATGGCATGAAATTAGGAAAATTTGTACATTTAA
TGTACACTTTGAGGTAGGTTAAGAAATACTGCATATTTCTTTTTCTAAATTGTGGATATTGAAC
TTAAGAAAACAAACATTAGCACAAAACACTAACATAGTGTTAACAAAGGAGATATTGAGCCGGG
CAGTGGTGGCACACCCCTTTAGTCCTAGCATTCAGGAGGCAGAGACAGGCAGATCTCTGAGTTC
AAGGCCAGCCTGGTCTACAGAGTTCTAGGACCAAACCCAAAAAACAAAAGGAGGTATTAAGTTT
CCAGGCTGCTTGCTGTGTACATCAAGAAAATTCACAGTTGAATTTTGAGATTAGCTGGTTATTA
GCAATTTCTGCCTGGAGCCAGCAGGGTGGGTGGACAACAGTGCGCCCTCCCCCCATTGCTGATG
AAGCTGCAGCTCAGCGTTCCCTCGGGCACCTCAGTGAAGAGGTGCGCCCAGACAAGCAGCCTCA
CTCACTCATGTTCCTTCAGAGCAGTTAGAGAAAAGTCCTCTCACACTTCATTTTCCCACTCATG
GCCCTAGAAGGTGCTCAGCTCCACAGTGGACAGAGTTAGTCAGGGCGGCTCGGCAGTTAGAGTA
TAAAGTTGTGTTCTAACTGGGATTGGACTAAGTTAGGAAAGGTACATTTGAGTGAATTTTGGCG
TGGCAGGAGGAGGTCGGCTGTATGCTTCCAGCCCCAAATTTATAGACAGAAACAAAGTTCTGTC
GGGGAAAAAGAGATATATATTTTTTAAAGTATTGTAACTCCAGCCTCTTTTTGGGTCGTTTACT
GGATTAGGACTGTTACAATCAAGGCCCTGGGGGATTTCGGTCAGCTCTAAATTAGTTTAGCCAA
CTGAACCTCTGCATAGATGGATGCACTCAATACAAAGCCAAGAAATCCGAATCCATTGCTATTT
CCTCCCACTTCTTAAATATATATGTATTCTGAGGTGGAAATGGGGGAGATTTGAATATAGAATT
TTTATTCTCAAACTCTACTTAATCTAAGGCTGCATTGTACTTTGGGAGAGCTCTAAGCACCTTT
AAAACAGTCGTCTCTAATTTGCTGTAGATGTTTGGTATTTTTTAAGGTTTGTCTCCCTGTTTGC
ACTCAGGGTTAAAGTGTCAGACTAAACTTTTAGAAGAAAATAGAGAAATTCAGGACCTCATTAC
AGATTATTCAGCAAAGTGGACCCTGATGCTTTCTCGATTTCCCCAGTGCTGGAGACAGCATCTC
CATCCAAAGAAACACATTTTCTTTAAAACTCTCACACTGTCTTCTCCCCCCTGCTTCCTGTTCC
TTCAGCCTCCCTCCCCTTCCCTCCCTGATACCTCTGATTATCTTGTGATCACCTGCTGTCGTCA
CACTCTCCTGAGCCCTGAGAGCAGGGTTTTGGGATAGGAGGTGGAGGTTTGGGTTAATATGGCC
GTGTATGCATTCTACCAAGGAAAATGTTCTTACGTTGACACAAGGAAGTACTGACTCACTGGCA
CTGAGAAAGGACTCGGCTACTTAGGGTTGGCATGCACACCCAGCCTTTCCTGGGCAGCCTGCTA
AGCCAGGTGACTGTGTGCTCTGTGGGGGGCTGGCTCTTCTCCCCTTATTTCTCTAGTCTGGGTG
GTGAGTGGGGGCTGTCACTCTACTGTCACGGTTTTTAGGACCTAAGGTGATCCTCATAAACTCT
TGGGGGAAGCTGGGAGTAACTTACTGGGAAGCTAATTTATTTGTCTGAAGGGTGGTGGAGGGAT
CACTGCCCTTTGATCTGCCTATGGTTTCCTCTTGGAGCTGTTGTGCAGATAGGGGTTGTACTTG
GTAAGACACCAAACAGATTTCTAATGTGTTCTATGGGTTTCAGTTCTGAAAAAAAAATAAAAGA
TTTTAATATAT

hide sequence

RefSeq Acc Id:

XM_017598811 ⟹ XP_017454300

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	71,351,840 - 71,390,149 (-)	NCBI
mRatBN7.2	13	68,805,278 - 68,839,977 (-)	NCBI
Rnor_6.0	13	74,280,178 - 74,333,463 (-)	NCBI

Sequence:

show sequence

AGCGGCCGGGGGCGGTGAGCGCGGCGTGGGGCTGCCCCTCCCCGGAGGCGGCGGGGGCGGCCGG
GGCCGCGCCGCACCGCACCGCGCGGGCGGCTATGGAGCGAGCCTGAGGCCGGCTAGGAACCGTG
GAGGTGCTGCAGTGAAGAAATGTGTAATCATGGAGTCTCCTTGCTAATCGTCGCCACCTGTCCC
CCGTGATAAGCCGGCAGGGACCAGCAGGGACGTGGGTCGAGGAGGAGAGGCCACCATGAAGCTG
AAGCAGCGGGTTGTGGTGTTAGCAATCCTGCTCGTCATTTTTATCTTCACCAAAGTGTTCCTGA
TAGACAATTTAGACACATCAGCTGCCAACCGAGAGGACCAGAGGGCGTTTCACCGCATGATGAC
CGGCTTGCGGGTGGAGCTGGTGCCCAAGCTGGACCACACCCTGCAGTCTCCTTGGGAGATTGCA
GCCCAGTGGGTGGTGCCCCGGGAAGTGTACCCTGAAGAGACCCCAGAGCTGGGAGCAGTCATGC
ATGCCATGGCCACTAAGAAAATCATCAAAGCTGACGTGGGCTACAAAGGGACACAGCTGAAAGC
TTTACTGACTCTTGAAGGAGGACAGAAAGTTGTCTTCAAGCCTAAGCGGTACAGCAGAGACTAT
GTGGTAGAAGGGGAGCCATACGCTGGTTACGACAGACACAACGCAGAGGTGGCGGCCTTCCATT
TGGACAGGATTCTGGGTTTCCGCCGAGCTCCCTTGGTCGTTGGCAGATATGTTAACCTGCGAAC
AGAAGTTAAGCCTGTGGCCACGGAGCAGCTGCTCAGCACCTTCCTCACTGTAGGAAACAATACT
TGTTTCTATGGGAAGTGCTACTATTGCCGAGAAACAGAGCCAGCATGTGCTGATGGAGACATGA
TGGAGGGCTCCATCACACTTTGGCTTCCAGATGTGTGGCCTCTGCAGAAGCATCGGCATCCCTG
GGGCAGGACTTACCGAGAGGGCAAATTGGCCAGGTGGGAATATGACGAGAGTTACTGCGACGCT
GTGAAGAAAACATCCCCCTATGACTCAGGCCCACGCCTCCTCGACATCATTGACACGGCTGTCT
TTGATTACTTGATTGGCAACGCTGACCGCCATCACTATGAAAGCTTTCAAGATGACGAAGGCGC
TAGCATGCTTATTCTTCTGGATAATGCCAAAAGCTTTGGGAACCCCTCGCTGGATGAGAGAAGC
ATCCTTGCCCCTCTCTATCAGTGTTGCATCATTCGGGTTTCAACTTGGAATAGACTGAATTATC
TAAAGAATGGAGTACTAAAGTCTGCCTTAAAATCTGCCATGGCCCATGACCCCATCGCCCCTGT
GCTCTCCGATCCACACTTGGACACTGTGGACCAGCGGCTTCTGAATGTCCTGGCCACCATCAAG
CAGTGTACCGACCAGTTTGGGATGGATACTGTGCTGGTGGAAGACAGGATGCCTCTCTCCCACT
TGTAACTCTCAAACAAGTGGAACTGATTTTTACAAAGATAGAGAAACAGCACAATCAATTCCAA
ATGGCATGTGATGGCCTGCAAGTGGCCACAGCAGGTGCTGGTGATAGAAGACGTGGCCCTGGGA
GTGCTCGGTGTTTTCTGCAGTGCAAGCTAAAGGCCACAGATCAGCAGGGCGTCTGTGCGGGGTC
AGCTCTCAAACTCAGACAGCCACTCTGCCCAGTCTTCGTTACCACCCACACCAGAGGACTGGCA
GGTTGATATCGGCTAAGGAATGGGTTCCAGAGTATGTGTCTGGGGCTAGCCTTGCTCTCCTTTC
TCACAGCCATGGATTCTCTGAAAACACTTTGTAGTCCCTGTGTCTTTAAAAAACAAAAAACCAG
AACTAGTCAGATTGAAAAACAGACTGTTCCTCCAGAGTGGCATCAGACAGAATAGCAGTCTGCT
CCGGGAAACCCGTTTTTAGGGTAGATTGGAGGATGGGGAAGGGCAGGAAGATCTTGGAACTCTA
GGCTATTGAGTAGCATGGATTTGACATCTCAGGGAAGAGAAGAGGGAGGGGCTCACTCTATAGA
ACCAGGAAGATAATTGACTTAGTGAAAACAGCTTCCTCTAGGGCTTAGGTTCTTAGATATGTCC
AAAGCAAACAGTCGTCCCCGGCTATGTTCACACTAACCACAGTCATCTCTAGAGGAAATATTAT
TACAACCCAAGCATGATCCTCCATGGACACTAATTTACCCCATGCCCACCTTTTGCCCAAAGTT
GCAAAACAAATTGAAACTGTGCTCTCTGCCCTCCCCCCACACACACCTTTCCCCCCCTTTCAAT
GGCATTGTTTATTTTGAGGTAGGCTATAGCCTCTTATTGTAGCCTGTGCTGATCCGGAACTTAA
CTGTATAACCCAGCTCACTTTGAACTGGCAGCAGTGCCGTGGCCTCAGCCTTCCCCATGCTAGG
ATGATAGGTGTGAACTACATGCCCAGCTCTCTCATGTCTGAAGTGCGCTCACACCCTGTGAGGT
GAATGGCTTGTAAGGCATTTGATCAATGGTGCTGTTCCTAGGAGGTTAGTGGCCTTGTCTGTGC
CTTTCTTATGAGAAAGTGTCCTGGTGGCTGGACTAAGCTTGTGATGTGTGCCCTGCAGGTAACA
GAGTGAAAGATTTTAAGCCTCTGAGCCTTGAAACTGAGGAGATCACAAAGAGCCTTAATATTTT
GGTTCATACCAAATCCAAATTTACTTTCATTCGGAGTTCCGAGCCCATGGTGTAGTAGAATTCT
TCATCTCTGAGTCAGGGTCAGCGTTAGTTCTGTGCTCTGTCATTTGATAGGTAAGCAGCTGCCA
CATGGCTAGGGAATGTGTCTGGGACAGTAGCTGCACTCAGACTGTGTTCCCTTGACATCTTGTC
CAGTTCTGCACTTATGTCACGAGAAGCCTTTCCACACTGGCTTGACATTTAATGCCAGCCACAG
AGCCTGGCTTGAGGCAACTCCCTTTTGAGTTTATCCCCCTACCCCTTCCCGTTTCTCACATTAA
AACCTAGTGGCAAGTAACCACTTTTCTCTTTTTTTCTTTTTTTCTTTTTCTCTTTTTTCTTTTT
TTTTCTTTTTCTCTTTTTTTTCTTTTTTTTCAGAGCTGGGGACCGAACCCAGGGCCTTGTGCTT
GCTAGGCAAGCACTCTACCACTGAGCTAAATCCCCAAGTAACCACTTTTAAATGGCATGAAATT
AGGAAAATTTGTACATTTAATGTACACTTTGAGGTAGGTTAAGAAATACTGCATATTTCTTTTT
CTAAATTGTGGATATTGAACTTAAGAAAACAAACATTAGCACAAAACACTAACATAGTGTTAAC
AAAGGAGATATTGAGCCGGGCAGTGGTGGCACACCCCTTTAGTCCTAGCATTCAGGAGGCAGAG
ACAGGCAGATCTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTTCTAGGACCAAACCCAAAAAA
CAAAAGGAGGTATTAAGTTTCCAGGCTGCTTGCTGTGTACATCAAGAAAATTCACAGTTGAATT
TTGAGATTAGCTGGTTATTAGCAATTTCTGCCTGGAGCCAGCAGGGTGGGTGGACAACAGTGCG
CCCTCCCCCCATTGCTGATGAAGCTGCAGCTCAGCGTTCCCTCGGGCACCTCAGTGAAGAGGTG
CGCCCAGACAAGCAGCCTCACTCACTCATGTTCCTTCAGAGCAGTTAGAGAAAAGTCCTCTCAC
ACTTCATTTTCCCACTCATGGCCCTAGAAGGTGCTCAGCTCCACAGTGGACAGAGTTAGTCAGG
GCGGCTCGGCAGTTAGAGTATAAAGTTGTGTTCTAACTGGGATTGGACTAAGTTAGGAAAGGTA
CATTTGAGTGAATTTTGGCGTGGCAGGAGGAGGTCGGCTGTATGCTTCCAGCCCCAAATTTATA
GACAGAAACAAAGTTCTGTCGGGGAAAAAGAGATATATATTTTTTAAAGTATTGTAACTCCAGC
CTCTTTTTGGGTCGTTTACTGGATTAGGACTGTTACAATCAAGGCCCTGGGGGATTTCGGTCAG
CTCTAAATTAGTTTAGCCAACTGAACCTCTGCATAGATGGATGCACTCAATACAAAGCCAAGAA
ATCCGAATCCATTGCTATTTCCTCCCACTTCTTAAATATATATGTATTCTGAGGTGGAAATGGG
GGAGATTTGAATATAGAATTTTTATTCTCAAACTCTACTTAATCTAAGGCTGCATTGTACTTTG
GGAGAGCTCTAAGCACCTTTAAAACAGTCGTCTCTAATTTGCTGTAGATGTTTGGTATTTTTTA
AGGTTTGTCTCCCTGTTTGCACTCAGGGTTAAAGTGTCAGACTAAACTTTTAGAAGAAAATAGA
GAAATTCAGGACCTCATTACAGATTATTCAGCAAAGTGGACCCTGATGCTTTCTCGATTTCCCC
AGTGCTGGAGACAGCATCTCCATCCAAAGAAACACATTTTCTTTAAAACTCTCACACTGTCTTC
TCCCCCCTGCTTCCTGTTCCTTCAGCCTCCCTCCCCTTCCCTCCCTGATACCTCTGATTATCTT
GTGATCACCTGCTGTCGTCACACTCTCCTGAGCCCTGAGAGCAGGGTTTTGGGATAGGAGGTGG
AGGTTTGGGTTAATATGGCCGTGTATGCATTCTACCAAGGAAAATGTTCTTACGTTGACACAAG
GAAGTACTGACTCACTGGCACTGAGAAAGGACTCGGCTACTTAGGGTTGGCATGCACACCCAGC
CTTTCCTGGGCAGCCTGCTAAGCCAGGTGACTGTGTGCTCTGTGGGGGGCTGGCTCTTCTCCCC
TTATTTCTCTAGTCTGGGTGGTGAGTGGGGGCTGTCACTCTACTGTCACGGTTTTTAGGACCTA
AGGTGATCCTCATAAACTCTTGGGGGAAGCTGGGAGTAACTTACTGGGAAGCTAATTTATTTGT
CTGAAGGGTGGTGGAGGGATCACTGCCCTTTGATCTGCCTATGGTTTCCTCTTGGAGCTGTTGT
GCAGATAGGGGTTGTACTTGGTAAGACACCAAACAGATTTCTAATGTGTTCTATGGGTTTCAGT
TCTGAAAAAAAAATAAAAGATTTTAATATAT

hide sequence

RefSeq Acc Id:

XM_039090749 ⟹ XP_038946677

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	71,351,840 - 71,389,901 (-)	NCBI
mRatBN7.2	13	68,805,278 - 68,839,727 (-)	NCBI

RefSeq Acc Id:

XM_039090750 ⟹ XP_038946678

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	71,367,057 - 71,390,147 (-)	NCBI
mRatBN7.2	13	68,818,359 - 68,839,976 (-)	NCBI

RefSeq Acc Id:

XM_063272331 ⟹ XP_063128401

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	71,355,847 - 71,390,192 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100657	(Get FASTA)	NCBI Sequence Viewer
	NP_001430544	(Get FASTA)	NCBI Sequence Viewer
	XP_006250120	(Get FASTA)	NCBI Sequence Viewer
	XP_006250121	(Get FASTA)	NCBI Sequence Viewer
	XP_008767856	(Get FASTA)	NCBI Sequence Viewer
	XP_017454300	(Get FASTA)	NCBI Sequence Viewer
	XP_038946677	(Get FASTA)	NCBI Sequence Viewer
	XP_038946678	(Get FASTA)	NCBI Sequence Viewer
	XP_063128401	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM09481	(Get FASTA)	NCBI Sequence Viewer
	EDM09482	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000006018
	ENSRNOP00000006018.3

RefSeq Acc Id:

NP_001100657 ⟸ NM_001107187

- UniProtKB:

D3ZUZ4 (UniProtKB/TrEMBL), A6ID16 (UniProtKB/TrEMBL), A6ID17 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MKLKQRVVVLAILLVIFIFTKVFLIDNLDTSAANREDQRAFHRMMTGLRVELVPKLDHTLQSPW
EIAAQWVVPREVYPEETPELGAVMHAMATKKIIKADVGYKGTQLKALLTLEGGQKVVFKPKRYS
RDYVVEGEPYAGYDRHNAEVAAFHLDRILGFRRAPLVVGRYVNLRTEVKPVATEQLLSTFLTVG
NNTCFYGKCYYCRETEPACADGDMMEGSITLWLPDVWPLQKHRHPWGRTYREGKLARWEYDESY
CDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLILLDNAKSFGNPSLD
ERSILAPLYQCCIIRVSTWNRLNYLKNGVLKSALKSAMAHDPIAPVLSDPHLDTVDQRLLNVLA
TIKQCTDQFGMDTVLVEDRMPLSHL

hide sequence

RefSeq Acc Id:	XP_006250120 ⟸ XM_006250058
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUZ4 (UniProtKB/TrEMBL), A6ID16 (UniProtKB/TrEMBL), A6ID17 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKLKQRVVVLAILLVIFIFTKVFLIDNLDTSAANREDQRAFHRMMTGLRVELVPKLDHTLQSPW EIAAQWVVPREVYPEETPELGAVMHAMATKKIIKADVGYKGTQLKALLTLEGGQKVVFKPKRYS RDYVVEGEPYAGYDRHNAEVAAFHLDRILGFRRAPLVVGRYVNLRTEVKPVATEQLLSTFLTVG NNTCFYGKCYYCRETEPACADGDMMEGSITLWLPDVWPLQKHRHPWGRTYREGKLARWEYDESY CDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLILLDNAKSFGNPSLD ERSILAPLYQCCIIRVSTWNRLNYLKNGVLKSALKSAMAHDPIAPVLSDPHLDTVDQRLLNVLA TIKQCTDQFGMDTVLVEDRMPLSHL hide sequence

RefSeq Acc Id:	XP_006250121 ⟸ XM_006250059
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUZ4 (UniProtKB/TrEMBL), A6ID16 (UniProtKB/TrEMBL), A6ID17 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKLKQRVVVLAILLVIFIFTKVFLIDNLDTSAANREDQRAFHRMMTGLRVELVPKLDHTLQSPW EIAAQWVVPREVYPEETPELGAVMHAMATKKIIKADVGYKGTQLKALLTLEGGQKVVFKPKRYS RDYVVEGEPYAGYDRHNAEVAAFHLDRILGFRRAPLVVGRYVNLRTEVKPVATEQLLSTFLTVG NNTCFYGKCYYCRETEPACADGDMMEGSITLWLPDVWPLQKHRHPWGRTYREGKLARWEYDESY CDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLILLDNAKSFGNPSLD ERSILAPLYQCCIIRVSTWNRLNYLKNGVLKSALKSAMAHDPIAPVLSDPHLDTVDQRLLNVLA TIKQCTDQFGMDTVLVEDRMPLSHL hide sequence

RefSeq Acc Id:	XP_008767856 ⟸ XM_008769634
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUZ4 (UniProtKB/TrEMBL), A6ID16 (UniProtKB/TrEMBL), A6ID17 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKLKQRVVVLAILLVIFIFTKVFLIDNLDTSAANREDQRAFHRMMTGLRVELVPKLDHTLQSPW EIAAQWVVPREVYPEETPELGAVMHAMATKKIIKADVGYKGTQLKALLTLEGGQKVVFKPKRYS RDYVVEGEPYAGYDRHNAEVAAFHLDRILGFRRAPLVVGRYVNLRTEVKPVATEQLLSTFLTVG NNTCFYGKCYYCRETEPACADGDMMEGSITLWLPDVWPLQKHRHPWGRTYREGKLARWEYDESY CDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLILLDNAKSFGNPSLD ERSILAPLYQCCIIRVSTWNRLNYLKNGVLKSALKSAMAHDPIAPVLSDPHLDTVDQRLLNVLA TIKQCTDQFGMDTVLVEDRMPLSHL hide sequence

RefSeq Acc Id:	XP_017454300 ⟸ XM_017598811
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUZ4 (UniProtKB/TrEMBL), A6ID16 (UniProtKB/TrEMBL), A6ID17 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKLKQRVVVLAILLVIFIFTKVFLIDNLDTSAANREDQRAFHRMMTGLRVELVPKLDHTLQSPW EIAAQWVVPREVYPEETPELGAVMHAMATKKIIKADVGYKGTQLKALLTLEGGQKVVFKPKRYS RDYVVEGEPYAGYDRHNAEVAAFHLDRILGFRRAPLVVGRYVNLRTEVKPVATEQLLSTFLTVG NNTCFYGKCYYCRETEPACADGDMMEGSITLWLPDVWPLQKHRHPWGRTYREGKLARWEYDESY CDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDEGASMLILLDNAKSFGNPSLD ERSILAPLYQCCIIRVSTWNRLNYLKNGVLKSALKSAMAHDPIAPVLSDPHLDTVDQRLLNVLA TIKQCTDQFGMDTVLVEDRMPLSHL hide sequence

Ensembl Acc Id:

ENSRNOP00000006018 ⟸ ENSRNOT00000006018

RefSeq Acc Id:	XP_038946677 ⟸ XM_039090749
- Peptide Label:	isoform X1
- UniProtKB:	D3ZUZ4 (UniProtKB/TrEMBL), A6ID16 (UniProtKB/TrEMBL), A6ID17 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038946678 ⟸ XM_039090750
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063128401 ⟸ XM_063272331
- Peptide Label:	isoform X2
- UniProtKB:	A6ID17 (UniProtKB/TrEMBL)

Protein Domains

FAM20 C-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZUZ4-F1-model_v2	AlphaFold	D3ZUZ4	1-409	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311162	AgrOrtholog
BioCyc Gene	G2FUF-17805	BioCyc
Ensembl Genes	ENSRNOG00000004337	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000006018	ENTREZGENE
	ENSRNOT00000006018.5	UniProtKB/TrEMBL
InterPro	DUF1193	UniProtKB/TrEMBL
	FAM20	UniProtKB/TrEMBL
KEGG Report	rno:304885	UniProtKB/TrEMBL
NCBI Gene	304885	ENTREZGENE
PANTHER	DUF1193	UniProtKB/TrEMBL
	GLYCOSAMINOGLYCAN XYLOSYLKINASE	UniProtKB/TrEMBL
Pfam	DUF1193	UniProtKB/TrEMBL
PhenoGen	Fam20b	PhenoGen
RatGTEx	ENSRNOG00000004337	RatGTEx
UniProt	A6ID16	ENTREZGENE, UniProtKB/TrEMBL
	A6ID17	ENTREZGENE, UniProtKB/TrEMBL
	D3ZUZ4	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-18	Fam20b	FAM20B, glycosaminoglycan xylosylkinase	Fam20b	family with sequence similarity 20, member B	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-07	Fam20b	family with sequence similarity 20, member B	RGD1311162_predicted	similar to RIKEN cDNA C530043G21 gene	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-30	RGD1311162_predicted	similar to RIKEN cDNA C530043G21 gene	Fam20b_predicted	family with sequence similarity 20, member B (predicted)	Symbol and Name updated	1299863	APPROVED
2005-01-12	Fam20b_predicted	family with sequence similarity 20, member B (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD