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Gene: Psd2 (pleckstrin and Sec7 domain containing 2) Rattus norvegicus

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Symbol:

Psd2

Name:

pleckstrin and Sec7 domain containing 2

RGD ID:

1311075

Description:

Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in regulation of ARF protein signal transduction. Predicted to be located in several cellular components, including cleavage furrow; neuronal cell body; and ruffle membrane. Predicted to be active in glutamatergic synapse and postsynapse. Orthologous to human PSD2 (pleckstrin and Sec7 domain containing 2); PARTICIPATES IN endocytosis pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC307500; PH and SEC7 domain-containing protein 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PSD2 (pleckstrin and Sec7 domain containing 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther
Mus musculus (house mouse):	Psd2 (pleckstrin and Sec7 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Psd2 (pleckstrin and Sec7 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PSD2 (pleckstrin and Sec7 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PSD2 (pleckstrin and Sec7 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Psd2 (pleckstrin and Sec7 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PSD2 (pleckstrin and Sec7 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PSD2 (pleckstrin and Sec7 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Psd2 (pleckstrin and Sec7 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Psd2 (pleckstrin and Sec7 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	PSD2 (pleckstrin and Sec7 domain containing 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Psd2 (pleckstrin and Sec7 domain containing 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	psd2 (pleckstrin and Sec7 domain containing 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	efa-6	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Efa6	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER)
Drosophila melanogaster (fruit fly):	Efa6	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	SYT1	Alliance	DIOPT (Ensembl Compara\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	27,838,943 - 27,890,712 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	18	27,839,627 - 27,890,709 (+)	Ensembl				GRCr8
mRatBN7.2	18	27,564,912 - 27,616,674 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	27,565,587 - 27,616,672 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	18	27,692,954 - 27,744,032 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	28,454,833 - 28,505,919 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	27,789,686 - 27,840,777 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	28,781,267 - 28,832,429 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	28,781,349 - 28,832,428 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	18	28,490,917 - 28,541,902 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	18	28,596,136 - 28,647,134 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	18	27,296,946 - 27,347,999 (+)	NCBI		Celera
RGSC_v3.1	18	28,595,933 - 28,671,884 (+)	NCBI
Cytogenetic Map	18	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

pre-malignant neoplasm (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

6-propyl-2-thiouracil (EXP)

aldehydo-D-glucose (ISO)

amitrole (EXP)

amphetamine (EXP)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

Butylbenzyl phthalate (ISO)

copper atom (EXP)

copper(0) (EXP)

Cuprizon (EXP)

D-glucose (ISO)

ethanol (ISO)

ethylparaben (ISO)

folic acid (ISO)

fructose (ISO)

glucose (ISO)

methapyrilene (ISO)

N-nitrosomorpholine (EXP)

okadaic acid (ISO)

paracetamol (EXP)

phenobarbital (ISO)

sodium arsenite (ISO)

streptozocin (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

trimellitic anhydride (ISO)

triptonide (ISO)

valproic acid (EXP)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

regulation of ARF protein signal transduction (IEA)

vesicle-mediated transport (IBA)

Cellular Component

cell junction (IEA)

cleavage furrow (ISO)

dendrite (ISO)

glutamatergic synapse (ISO)

neuronal cell body (ISO)

postsynapse (ISO)

ruffle membrane (IBA,IEA,ISO)

Molecular Function

guanyl-nucleotide exchange factor activity (IBA,IEA)

phospholipid binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

endocytosis pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
2.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:15836626	PMID:23603394

Genomics

Comparative Map Data

Psd2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	27,838,943 - 27,890,712 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	18	27,839,627 - 27,890,709 (+)	Ensembl				GRCr8
mRatBN7.2	18	27,564,912 - 27,616,674 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	27,565,587 - 27,616,672 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	18	27,692,954 - 27,744,032 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	28,454,833 - 28,505,919 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	27,789,686 - 27,840,777 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	28,781,267 - 28,832,429 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	28,781,349 - 28,832,428 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	18	28,490,917 - 28,541,902 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	18	28,596,136 - 28,647,134 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	18	27,296,946 - 27,347,999 (+)	NCBI		Celera
RGSC_v3.1	18	28,595,933 - 28,671,884 (+)	NCBI
Cytogenetic Map	18	p11	NCBI

PSD2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	139,742,475 - 139,844,466 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	139,795,808 - 139,844,470 (+)	Ensembl			hg38	GRCh38
GRCh37	5	139,175,393 - 139,224,051 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	139,155,590 - 139,204,232 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	5	139,155,589 - 139,204,232	NCBI
Celera	5	135,250,835 - 135,299,476 (+)	NCBI		Celera
Cytogenetic Map	5	q31.2	NCBI
HuRef	5	134,332,037 - 134,367,333 (+)	NCBI		HuRef
CHM1_1	5	138,608,513 - 138,657,158 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	140,266,708 - 140,369,568 (+)	NCBI		T2T-CHM13v2.0

Psd2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	36,075,480 - 36,147,768 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	36,097,883 - 36,147,768 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	18	35,963,872 - 36,014,715 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	35,964,830 - 36,014,715 (+)	Ensembl			mm10	GRCm38
MGSCv37	18	36,124,489 - 36,174,369 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	18	36,091,079 - 36,140,648 (+)	NCBI		MGSCv36	mm8
Celera	18	36,421,573 - 36,471,515 (+)	NCBI		Celera
Cytogenetic Map	18	B2	NCBI
cM Map	18	19.34	NCBI

Psd2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955418	795,825 - 849,088 (-)	Ensembl
ChiLan1.0	NW_004955418	793,960 - 848,550 (-)	NCBI	ChiLan1.0	ChiLan1.0

PSD2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	135,058,026 - 135,106,728 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	133,197,584 - 133,246,281 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	135,162,701 - 135,211,389 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	141,294,395 - 141,329,952 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	141,294,395 - 141,329,952 (+)	Ensembl			panPan2	panpan1.1

PSD2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	34,940,295 - 35,080,623 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	34,935,858 - 35,082,085 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	32,066,494 - 32,185,433 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	35,418,645 - 35,537,537 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	35,418,835 - 35,537,499 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	32,471,017 - 32,589,886 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	33,337,591 - 33,456,565 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	34,088,907 - 34,208,097 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Psd2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	152,730,237 - 152,776,178 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936531	8,835,464 - 8,881,683 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936531	8,835,486 - 8,879,862 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PSD2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	141,595,464 - 141,658,713 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	2	141,591,724 - 141,658,711 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	147,508,730 - 147,546,585 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PSD2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	42,447,804 - 42,496,066 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	42,461,486 - 42,494,067 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666034	35,389,233 - 35,444,395 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Psd2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624743	32,573,044 - 32,616,864 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624743	32,572,976 - 32,616,922 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Psd2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	15	8,362,110 - 8,412,663 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Psd2
155 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	582
Count of miRNA genes:	268
Interacting mature miRNAs:	334
Transcripts:	ENSRNOT00000026112
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331733	Bp233	Blood pressure QTL 233	3.97196		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	25071126	83910656	Rat
2301409	Cm70	Cardiac mass QTL 70		0.001	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	18	7065728	52065728	Rat
1358358	Sradr6	Stress Responsive Adrenal Weight QTL 6	2.49		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	18	22015562	61600538	Rat
1331735	Rf44	Renal function QTL 44	2.981		urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	18	15642280	31610627	Rat
61382	Bp46	Blood pressure QTL 46	18.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	12216684	31644508	Rat
2301413	Bp318	Blood pressure QTL 318		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	26822186	71822186	Rat
12904716	Am21	Aortic mass QTL 21		0.005	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	18	7065728	52065728	Rat
1331741	Bp232	Blood pressure QTL 232	3.59112		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	23494057	85487725	Rat
12904714	Cm131	Cardiac mass QTL 131		0.002	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	18	7065728	52065728	Rat
12904715	Cm132	Cardiac mass QTL 132		0.001	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	18	7065728	52065728	Rat
6903345	Bp349	Blood pressure QTL 349	3.9		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	3917226	48917226	Rat
12904668	Bw188	Body weight QTL 188		0.03	body mass (VT:0001259)	body weight (CMO:0000012)	18	26822186	71822186	Rat
2313082	Bss85	Bone structure and strength QTL 85	0.8	0.0001	long bone metaphysis morphology trait (VT:0000133)	tibia midshaft total cross-sectional area (CMO:0001715)	18	15226101	42690662	Rat
12904669	Cm125	Cardiac mass QTL 125		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	18	26822186	71822186	Rat
6903347	Bp350	Blood pressure QTL 350	4.4		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	1	31610627	Rat
12904670	Cm126	Cardiac mass QTL 126		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	18	26822186	71822186	Rat
2312568	Glom21	Glomerulus QTL 21	2	0.005	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	18	5460455	42690191	Rat
6903349	Bp351	Blood pressure QTL 351	3.5		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	3917226	48917226	Rat
631509	Sald2	Serum aldosterone level QTL 2	2.9		blood aldosterone amount (VT:0005346)	serum aldosterone level (CMO:0000487)	18	26415821	71415821	Rat
6903351	Bp352	Blood pressure QTL 352	3.3		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	3917226	48917226	Rat
12904677	Kidm72	Kidney mass QTL 72		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	18	26822186	71822186	Rat
1331766	Bp236	Blood pressure QTL 236	3.022		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	1	31610627	Rat
12904673	Cm127	Cardiac mass QTL 127		0.005	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	18	26822186	71822186	Rat
12904675	Am19	Aortic mass QTL 19		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	18	26822186	71822186	Rat
631264	Scl22	Serum cholesterol level QTL 22	6.2		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	18	12216684	31644508	Rat
1331775	Bp235	Blood pressure QTL 235	3.201		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	15642280	31610627	Rat
2325839	Bp348	Blood pressure QTL 348		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	1	44930869	Rat
1600373	Mamtr6	Mammary tumor resistance QTL 6			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	18	19553532	85493247	Rat
2293708	Bss46	Bone structure and strength QTL 46	8.8	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	18	12066482	57066482	Rat
1578667	Bss21	Bone structure and strength QTL 21	3.5		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	18	12066482	85493247	Rat
2312598	Bp340	Blood pressure QTL 340		0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	3811902	30809809	Rat
2300180	Bmd67	Bone mineral density QTL 67	4.8	0.0001	femur mineral mass (VT:0010011)	bone mineral density (CMO:0001226)	18	1	34566578	Rat
2299160	Iddm35	Insulin dependent diabetes mellitus QTL 35	2.79		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	18	4482648	49482648	Rat
1331753	Bp231	Blood pressure QTL 231	3.643		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	1	54490981	Rat
1578661	Bss20	Bone structure and strength QTL 20	3.7		femur morphology trait (VT:0000559)	femoral neck cross-sectional area (CMO:0001697)	18	12066482	85493247	Rat
11565454	Kidm59	Kidney mass QTL 59		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	18	7065728	52065728	Rat
1331754	Bp230	Blood pressure QTL 230	4.61609		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	15642280	86134022	Rat
2293661	Bss50	Bone structure and strength QTL 50	4.64	0.0003	lumbar vertebra size trait (VT:0010518)	lumbar vertebra trabecular cross-sectional area (CMO:0001692)	18	1	34566578	Rat
61375	Bp41	Blood pressure QTL 41	2.4		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	18	4307354	49307354	Rat

Markers in Region

AU048745

Rat Assembly	Chr	Position (strand)	Source
Cytogenetic Map	5	q32	UniSTS
Cytogenetic Map	13	q24	UniSTS
Cytogenetic Map	6	q32	UniSTS
Cytogenetic Map	17	p12	UniSTS
Cytogenetic Map	16	p14	UniSTS
Cytogenetic Map	13	q26	UniSTS
Cytogenetic Map	10	q22	UniSTS
Cytogenetic Map	7	q11	UniSTS
Cytogenetic Map	8	q24	UniSTS
Cytogenetic Map	5	q21	UniSTS
Cytogenetic Map	4	q24	UniSTS
Cytogenetic Map	2	q11	UniSTS
Cytogenetic Map	1	q54	UniSTS
Cytogenetic Map	1	q36	UniSTS
Cytogenetic Map	18	p11	UniSTS
Cytogenetic Map	13	q13	UniSTS
Cytogenetic Map	10	q24	UniSTS
Cytogenetic Map	8	q31	UniSTS
Cytogenetic Map	3	q21	UniSTS
Cytogenetic Map	13	p13	UniSTS
Cytogenetic Map	1	q21	UniSTS
Cytogenetic Map	11	q23	UniSTS
Cytogenetic Map	10	q31	UniSTS
Cytogenetic Map	16	q12.2	UniSTS
Cytogenetic Map	3	q24	UniSTS
Cytogenetic Map	5	q36	UniSTS
Cytogenetic Map	3	p13	UniSTS

RH133273

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	27,616,731 - 27,616,924 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	28,832,488 - 28,832,680	NCBI	Rnor6.0
Rnor_5.0	18	28,541,961 - 28,542,153	UniSTS	Rnor5.0
RGSC_v3.4	18	28,647,194 - 28,647,386	UniSTS	RGSC3.4
Celera	18	27,348,059 - 27,348,251	UniSTS
RH 3.4 Map	18	388.1	UniSTS
Cytogenetic Map	18	p11	UniSTS

IDP8024

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	27,607,030 - 27,608,415 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	28,822,787 - 28,824,171	NCBI	Rnor6.0
Rnor_5.0	18	28,532,260 - 28,533,644	UniSTS	Rnor5.0
Celera	18	27,338,358 - 27,339,742	UniSTS
Cytogenetic Map	18	p11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
14	10	36	161	63	62	31	86	31	6	282	153	9	139	76	88	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107395	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096865	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096866	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005496039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	PQ586285	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000026112 ⟹ ENSRNOP00000026112

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	27,839,627 - 27,890,708 (+)	Ensembl
mRatBN7.2 Ensembl	18	27,565,587 - 27,616,672 (+)	Ensembl
Rnor_6.0 Ensembl	18	28,781,349 - 28,832,428 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000123284 ⟹ ENSRNOP00000103034

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	27,843,570 - 27,890,709 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000151796 ⟹ ENSRNOP00000100216

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	27,851,348 - 27,890,709 (+)	Ensembl

RefSeq Acc Id:

NM_001107395 ⟹ NP_001100865

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	27,839,627 - 27,890,708 (+)	NCBI
mRatBN7.2	18	27,565,587 - 27,616,672 (+)	NCBI
Rnor_6.0	18	28,781,349 - 28,832,428 (+)	NCBI
Rnor_5.0	18	28,490,917 - 28,541,902 (+)	NCBI
RGSC_v3.4	18	28,596,136 - 28,647,134 (+)	RGD
Celera	18	27,296,946 - 27,347,999 (+)	RGD

Sequence:

show sequence

CTCTCCACAGCCGAGGTTCCAACACCTGAGGGGACAGAAGCGAACGCGGGGAGCTCCAACAGGC
GGCGGCACCGGACCGCGGGTCCAGGGGTGGCCTCCGCATGGCCCCACCGTGAGAGGGGACCCAG
CGGCTGGGACACGAGCGCCCTAGGGGCTGGCAGGGTCGGGTGGAAACAGTGACTGCCATGGATG
AAGAAAAGCTCCCAAGTGATCTGCACAAGGAAGAGGGTGCTATCCAGGACCACAGCCTGGAGCC
TGAAGAGGGTCCTGGGGTTCAGAATGGAACAGCAGCCAGCGAAAGCCTCAACAGCCACGTCATC
AGTCCAGTCAGCGAGAAGACAGGCACCTTAGAGGGCACCATGGAGCCCGTGGGCAACCCAGACG
TGGCCCTGCCTGGCCTTAGCCTCTCTTTGACCAATGGCCTGGCTTTGGGGCAGGATGGGAACAT
TCTGGAAGATTCTGTAGAATCTAGGCCCTGGAGAGCAAGTGGACCAGCAGAGGAGGAGGATACC
CCTAGGAGTCTCTGTCTAGATGCTGAGGACACTCAGCTGGGGCTGGATTGTCCTGGCGAACCGG
ATGTGCGGGATGGCTTCAGTGCCACTTTCGAGAAGATTCTGGAGTCGGAGCTATTGCGGGGCAC
CCAGTATAGCAGCCTGGACTCACTCGATGTGCTGAGTCTCACTGACGAGAGTGATAGCTGTGTC
AGCTTTGAGGCTCCCCTGACACCCCTCATCCAGCAACGGGCTCGAGACAGCCCTGAGCCAGCAG
GGCTGGGCATTGGAGACATAGGGCCTGAAGGGGACCTGGGGGCAGCTGGTGGTGGTGATGGGGA
ACTGGGCAGTCCCCTGCGGCGGTCCATCTCTAGCAGCCGCTCGGAGAATGTCTTGAGCCACCTG
TCTCTCACATCGATGCCCAATGGGTTCCATGAAGATGAGCCTGGGGGCTCAGGAGGGGATGATG
AGGATGATGAGGACACGGACAAGGTGCTGAACTCTGCCAGTGACACCAGCCTTAAGGACGGTCT
GTCGGACTCGGACTCAGAGCTGAGCAGCTCTGAGGGGCTGGAGCCTGGCAGCACGGATCCAATG
GCCAATGGGTGCCAGGGGGTCAGCGAAGCCGCTCGCCGGCTGGCACGACGCCTCTACCACCTTG
AAGGCTTCCAGCGCTGTGACGTGGCCCGGCAGCTGGGCAAAAACAATGAGTTCAGCAGGCTGGT
TGCTGGGGAGTACCTCAGTTTCTTCGACTTCTCAGGCCTCACTTTGGACAGAGCACTCAGAACC
TTCCTGAAGGCCTTCCCACTGATGGGGGAGACACAGGAACGAGAACGAGTCCTTACCCACTTCT
CCCGCCGGTACTGCCAGTGTAACCCAGACGACAGCACGTCGGAAGATGGGATCCACACGCTCAC
CTGTGCCCTGATGCTGCTCAACACAGACCTGCACGGACATAACATTGGCAAGAAGATGTCCTGC
CAGCAATTCATTGCCAACTTGGACCAGCTGAATGATGGACAAGACTTTGCCAAAGACCTTTTGA
AGACGCTTTACAACTCCATCAAGAATGAAAAGCTGGAATGGGCCATTGATGAGGATGAGCTGAG
AAAATCCCTGTCTGAGCTGGTGGATGACAAGTTTGGGACAGGCACAAAGAAGGTGACTCGGATC
TTGGACGGTGGCAATCCATTCCTGGATGTCCCACAGGCCCTCAGTGCCACCACCTACAAGCATG
GTGTGCTGACCCGGAAGACTCATGCTGACATGGACGGCAAGAGGACTCCCCGAGGGAGGCGTGG
CTGGAAGAAATTCTACGCGGTGCTCAAAGGGACCATCTTGTACCTGCAGAAGGATGAATACAGG
CCTGACAAGGCTCTGTCCGAGGGGGACCTGAAGAACGCCATCCGTGTGCATCACGCTCTGGCCA
CCAGGGCTTCTGACTACAGTAAGAAGTCCAACGTGCTCAAGCTGAAGACAGCCGACTGGAGGGT
CTTCCTCTTCCAGGCACCGAGCAAGGAAGAGATGCTGTCCTGGATCCTGAGGATCAACCTAGTA
GCTGCCATCTTCTCAGCACCTGCCTTCCCAGCAGCCGTCAGCTCCATGAAGAAGTTTTGTCGAC
CCCTCCTGCCCTCCTGTACCACTCGCTTCTGCCAGGAGGAGCAGCTGCGGTCCCATGAGAATAA
GTTGAGGCAGGTGACTGCAGAGCTGGCTGAGCACAGGTGTCACCCACTGGAGAGAGGCCTCAAG
TCAAAGGAAGCGGAGGAATATCGGCTGAAGGAACACTATCTCACGTTTGAGAAAAGCCGTTATG
AGACCTATATCCACCTACTGGCTGTGAAAATCAAAGTGGGCTCAGATGACCTGGAGCGGATTGA
GGCTCGGCTGGCTACTCTAGAAGGGGAAGACCCAGCTCTCCGGAAAACACACTCAAGCCCTGCT
CTGAGCCTGGGCCATGGGCCTGTGACTGGCAGCAAAGCCGCAAAGGATGCCTCTGCCTCCGATA
CTTAGCTGGTGTGGCTGCACAGGCCCTAGAGGCAGGCAAATGTCCCCAGAGGGGTCAGTGAGCA
CAATTCTAGCCAGGGACTGCTTGGACTGAGCTCCAGGCAGTTAACAGGCAACCAGAGGGGTATG
GAGAGCCCTGTGTCCACTGAGATGGAGATGCCACTCGTGACGTGATCTTCTTGCATCCTGGGCC
ATCTCTGGCCTAGACCCTCTCCTAGCCCTGATGCCCTCCAGTCATGGGGCCTTGGCTTGCAGGC
CAGACATGTTCTAGGGCTGAAGAAATCCATCAGTTTCCCAGGCTCGCTTCTCATCAAGCTCCCC
CCTCGTCTTGTATTTGTGAGGGTGGGTCTGGACTCTGGGTCTCAGCTTGGTCATCCACCCTTTC
TCCTCTTTCCTCTCAGTTGACCAGCAGCAGGTCTACGGACCACCAGCAACCTTTGCAACTGGCC
CAGCTCTCCTGCCTCACATTGCAATAATCTGGGGCCTAACCTCGACTCAGTGCCAAGCTGGGTC
CACTCATGCGTGTGCCCCCTTCTCCTTTCATCCCCTGAGGCCTCTCCAGCCTCTTTTTTTTTTT
TATACAGACACACAAATATATATATGTAAAGAACTCATTTAAAGAAGGGTGGGGAACTGCTACC
CACTAGAGGATGAAACCAGATGAATGAAAAGGCCCGTCTCGGAGCTTGGCCTGCTAGTGAGGAA
GTCTGCAGTGGGCCCTCTGCTGCTCCCACACTCTGGATGGAAGGATGAAGACCCTATGTGTTTT
TACCCTTTCCTTTTCTGGCTTACTTGTGACTCACAATCGCTTTTCCAGTTGATGCTTTTGGACT
GAACAGGATGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTTCTCTA
TCCCAGAAGTGTCCTGTGGGGTGAGTGCCTTGGGAGCACACCTCTGTTTTTGATCTTCCTGTGA
ATACTGCCAAGGTCTCTGAACTCCAGTGGTGGCCTCTGCACAGACCCACGGGCAGTATGGAAGG
ACACTCTACCCTGCTAAGCACCACCCTCCAGCAAGCCCAGGCTGGGTGGTAGAGTAGGGTTAAG
GAAGCTGTTAGTCCTTAGTCTTGTGGGGAAGGGGGAGTGACAAGGTTTTGATTAGTGATAATCC
TTTCCTTTTCCTAGCAAATCAGAAAGGCTAAGCTAAAGACACGGTTGAGAGTAGAGACCCGAGT
CTCTCACGGGTTGACATCCTTTAAACACTGCATCACTTAGAACAACAAGTGAGTGTGTGTGTGT
GTGTGTGGGTGGGGGTAGCCCTTTTGACACAGCTACCACGAGCCAATCTTTCCTACTGTTTGGC
CAACAGTTTGCAGTCTTGGGTGACATAAGCCTTCAACTAAGTGCTTAACACTTCAAGTCCACTC
CCATCTGATGCAGGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGTTGAAATCCAAATTGTTTA
AATTGGATTAGCTGAAGTGCGTTTTATAACCAAACCATCTGGCCCCTTTGTTTTGCTCCGGGGA
AGCAAATGCTCGTTTGAATGAGATCAGGAAGGCAATTTAGGGGGGCAGTAAAGAGATCTCAGTT
CTTTGTCCAGCTGCCTGAAGGTCCTTTGATTTTCCAGCCGGTGTCCCACTCTCTGTATCACGGG
GTGGGGGGTGACAACAGAGGTGCAGGTTCGTTAGCCTCAGACACATGTGATTCCCCAAGCACTA
GTTGTGCCTCCCATCAGTAAAGACATTTTTTAGTTCGCTTCCTTAATTGTATAATTCTTTATTT
GTAAATTATATACATGTACTACTGTACTAAAATATTATGTACATTATAAAACATACACAAAAAT
AGAAATTTAAAAAAGATGAGATGAAAATAAATCTAAATCAAAGTT

hide sequence

RefSeq Acc Id:

XM_039096865 ⟹ XP_038952793

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	27,846,969 - 27,890,712 (+)	NCBI
mRatBN7.2	18	27,564,923 - 27,616,674 (+)	NCBI

RefSeq Acc Id:

XM_039096866 ⟹ XP_038952794

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	27,846,969 - 27,890,712 (+)	NCBI
mRatBN7.2	18	27,564,923 - 27,616,674 (+)	NCBI

RefSeq Acc Id:

XM_063277371 ⟹ XP_063133441

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	27,838,953 - 27,890,712 (+)	NCBI

RefSeq Acc Id:

XR_005496039

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	27,838,943 - 27,881,871 (+)	NCBI
mRatBN7.2	18	27,564,912 - 27,607,838 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100865	(Get FASTA)	NCBI Sequence Viewer
	XP_038952793	(Get FASTA)	NCBI Sequence Viewer
	XP_038952794	(Get FASTA)	NCBI Sequence Viewer
	XP_063133441	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL76283	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000026112
	ENSRNOP00000026112.6
	ENSRNOP00000100216.1
	ENSRNOP00000103034.1

RefSeq Acc Id:

NP_001100865 ⟸ NM_001107395

- UniProtKB:

A6J301 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDEEKLPSDLHKEEGAIQDHSLEPEEGPGVQNGTAASESLNSHVISPVSEKTGTLEGTMEPVGN
PDVALPGLSLSLTNGLALGQDGNILEDSVESRPWRASGPAEEEDTPRSLCLDAEDTQLGLDCPG
EPDVRDGFSATFEKILESELLRGTQYSSLDSLDVLSLTDESDSCVSFEAPLTPLIQQRARDSPE
PAGLGIGDIGPEGDLGAAGGGDGELGSPLRRSISSSRSENVLSHLSLTSMPNGFHEDEPGGSGG
DDEDDEDTDKVLNSASDTSLKDGLSDSDSELSSSEGLEPGSTDPMANGCQGVSEAARRLARRLY
HLEGFQRCDVARQLGKNNEFSRLVAGEYLSFFDFSGLTLDRALRTFLKAFPLMGETQERERVLT
HFSRRYCQCNPDDSTSEDGIHTLTCALMLLNTDLHGHNIGKKMSCQQFIANLDQLNDGQDFAKD
LLKTLYNSIKNEKLEWAIDEDELRKSLSELVDDKFGTGTKKVTRILDGGNPFLDVPQALSATTY
KHGVLTRKTHADMDGKRTPRGRRGWKKFYAVLKGTILYLQKDEYRPDKALSEGDLKNAIRVHHA
LATRASDYSKKSNVLKLKTADWRVFLFQAPSKEEMLSWILRINLVAAIFSAPAFPAAVSSMKKF
CRPLLPSCTTRFCQEEQLRSHENKLRQVTAELAEHRCHPLERGLKSKEAEEYRLKEHYLTFEKS
RYETYIHLLAVKIKVGSDDLERIEARLATLEGEDPALRKTHSSPALSLGHGPVTGSKAAKDASA
SDT

hide sequence

Ensembl Acc Id:

ENSRNOP00000026112 ⟸ ENSRNOT00000026112

RefSeq Acc Id:	XP_038952793 ⟸ XM_039096865
- Peptide Label:	isoform X1
- UniProtKB:	D4ACB6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038952794 ⟸ XM_039096866
- Peptide Label:	isoform X1
- UniProtKB:	D4ACB6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063133441 ⟸ XM_063277371
- Peptide Label:	isoform X2
- UniProtKB:	A6J301 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000100216 ⟸ ENSRNOT00000151796

Ensembl Acc Id:

ENSRNOP00000103034 ⟸ ENSRNOT00000123284

Protein Domains

PH SEC7

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4ACB6-F1-model_v2	AlphaFold	D4ACB6	1-771	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311075	AgrOrtholog
BioCyc Gene	G2FUF-7883	BioCyc
Ensembl Genes	ENSRNOG00000019177	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000026112	ENTREZGENE
	ENSRNOT00000026112.7	UniProtKB/TrEMBL
	ENSRNOT00000123284.1	UniProtKB/TrEMBL
	ENSRNOT00000151796.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.1000.11	UniProtKB/TrEMBL
	2.30.29.30	UniProtKB/TrEMBL
InterPro	PH_9	UniProtKB/TrEMBL
	PH_type	UniProtKB/TrEMBL
	Pleckstrin_homology	UniProtKB/TrEMBL
	Sec7	UniProtKB/TrEMBL
	SEC7_alpha_orthog	UniProtKB/TrEMBL
	Sec7_sf	UniProtKB/TrEMBL
	Spectrin_PH	UniProtKB/TrEMBL
KEGG Report	rno:307500	UniProtKB/TrEMBL
NCBI Gene	307500	ENTREZGENE
PANTHER	GUANYL-NUCLEOTIDE EXCHANGE FACTOR	UniProtKB/TrEMBL
	PH AND SEC7 DOMAIN-CONTAINING PROTEIN 2	UniProtKB/TrEMBL
Pfam	PH_9	UniProtKB/TrEMBL
	Sec7	UniProtKB/TrEMBL
PhenoGen	Psd2	PhenoGen
PRINTS	SPECTRINPH	UniProtKB/TrEMBL
PROSITE	PH_DOMAIN	UniProtKB/TrEMBL
	SEC7	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000019177	RatGTEx
SMART	Sec7	UniProtKB/TrEMBL
	SM00233	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
	Sec7	UniProtKB/TrEMBL
UniProt	A0ABK0L6K1_RAT	UniProtKB/TrEMBL
	A0ABK0LFB3_RAT	UniProtKB/TrEMBL
	A6J301	ENTREZGENE, UniProtKB/TrEMBL
	D4ACB6	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Psd2	pleckstrin and Sec7 domain containing 2	Psd2_predicted	pleckstrin and Sec7 domain containing 2 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Psd2_predicted	pleckstrin and Sec7 domain containing 2 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)