Plekhn1 (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 5 | 172,087,524 - 172,095,566 (-) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 5 | 172,087,055 - 172,095,374 (-) | Ensembl | | | | GRCr8 | mRatBN7.2 | 5 | 166,805,309 - 166,813,339 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 166,804,837 - 166,813,155 (-) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 5 | 169,507,532 - 169,515,247 (-) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 171,328,916 - 171,336,631 (-) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 171,291,477 - 171,299,192 (-) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 173,646,055 - 173,654,140 (-) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 173,646,195 - 173,653,905 (-) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 177,120,095 - 177,128,194 (-) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 5 | 173,056,074 - 173,063,784 (-) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 5 | 165,007,290 - 165,015,000 (-) | NCBI | | Celera | | | RGSC_v3.1 | 5 | 173,066,841 - 173,073,718 (-) | NCBI | | | | | Cytogenetic Map | 5 | q36 | NCBI | | | | |
|
PLEKHN1 (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 1 | 966,482 - 975,865 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 966,437 - 975,865 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 1 | 901,862 - 911,245 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 891,740 - 900,351 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Celera | 1 | 1,681,246 - 1,689,796 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | p36.33 | NCBI | | | | | HuRef | 1 | 171,515 - 180,127 (+) | NCBI | | HuRef | | | CHM1_1 | 1 | 888,807 - 897,417 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 395,193 - 404,574 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Plekhn1 (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 4 | 156,305,913 - 156,312,999 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 156,305,913 - 156,314,174 (-) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 4 | 156,221,456 - 156,228,542 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 156,221,456 - 156,234,857 (-) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 4 | 155,595,565 - 155,602,651 (-) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 155,595,565 - 155,601,994 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 158,477,941 - 158,485,021 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | E2 | NCBI | | | | | cM Map | 4 | 88.63 | NCBI | | | | |
|
Plekhn1 (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955486 | 9,737,365 - 9,744,111 (-) | Ensembl | | | | | ChiLan1.0 | NW_004955486 | 9,736,801 - 9,744,659 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
PLEKHN1 (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 1 | 227,287,246 - 227,297,334 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 225,984,018 - 225,993,513 (-) | NCBI | | NHGRI_mPanPan1 | | | PanPan1.1 | 1 | 864,966 - 874,854 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 865,290 - 873,575 (+) | Ensembl | | | panPan2 | panpan1.1 |
|
PLEKHN1 (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 5 | 56,193,824 - 56,202,340 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 5 | 56,194,583 - 56,202,293 (+) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 5 | 56,271,872 - 56,280,394 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 5 | 56,397,340 - 56,405,868 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 5 | 56,398,103 - 56,405,826 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 5 | 56,388,428 - 56,396,950 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 5 | 56,280,346 - 56,288,867 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 5 | 56,670,364 - 56,678,889 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
|
Plekhn1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
|
PLEKHN1 (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 6 | 63,328,605 - 63,336,138 (+) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 63,328,054 - 63,336,140 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 57,936,303 - 57,942,555 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
PLEKHN1 (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 20 | 130,456,993 - 130,467,189 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 130,458,267 - 130,466,472 (-) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666054 | 35,087,081 - 35,096,878 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Plekhn1 (Heterocephalus glaber - naked mole-rat) |
|
Plekhn1 (Rattus rattus - black rat) |
|