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Gene: Catsperg (catsper channel auxiliary subunit gamma) Rattus norvegicus

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Symbol:

Catsperg

Name:

catsper channel auxiliary subunit gamma (Ensembl:cation channel sperm associated auxiliary subunit gamma)

RGD ID:

1310942

Description:

Predicted to be located in membrane and sperm principal piece. Predicted to be part of CatSper complex. Predicted to be active in motile cilium. Orthologous to human CATSPERG (cation channel sperm associated auxiliary subunit gamma); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

cation channel sperm associated auxiliary subunit gamma; cation channel sperm-associated auxiliary subunit gamma; cation channel sperm-associated protein subunit gamma; cation channel sperm-associated protein subunit gamma 1-like; cation channel, sperm-associated, gamma; cation channel, sperm-associated, gamma 1; catsper channel auxiliary subunit gamma 1; Catsperg1; LOC102550585; LOC292767; RGD1310942; similar to R27328_1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	93,616,209 - 93,646,970 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	93,616,209 - 93,661,618 (-)	Ensembl				GRCr8
mRatBN7.2	1	84,488,728 - 84,519,495 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	84,488,730 - 84,519,559 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	89,900,015 - 89,930,598 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	98,359,562 - 98,390,223 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	91,655,862 - 91,686,445 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	88,131,282 - 88,162,609 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	88,131,554 - 88,162,583 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	89,306,662 - 89,337,668 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	84,322,700 - 84,353,333 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	78,876,360 - 78,906,488 (-)	NCBI		Celera
RGSC_v3.1	1	84,403,467 - 84,431,556 (-)	NCBI
Cytogenetic Map	1	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

17beta-estradiol (EXP,ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,4,4'-trichlorobiphenyl (ISO)

2,4,6-tribromophenol (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acrylamide (EXP,ISO)

aflatoxin B1 (EXP,ISO)

Aflatoxin B2 alpha (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

decabromodiphenyl ether (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

Licochalcone B (ISO)

methapyrilene (ISO)

nitrofen (EXP)

okadaic acid (ISO)

paracetamol (ISO)

paraquat (EXP)

PCB138 (ISO)

perfluorohexanesulfonic acid (ISO)

perfluorononanoic acid (ISO)

perfluorooctanoic acid (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

toluene (ISO)

triptonide (ISO)

tris(2-butoxyethyl) phosphate (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

CatSper complex (IBA,IEA)

motile cilium (IBA)

sperm principal piece (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:19516020

Genomics

Comparative Map Data

Catsperg
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	93,616,209 - 93,646,970 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	93,616,209 - 93,661,618 (-)	Ensembl				GRCr8
mRatBN7.2	1	84,488,728 - 84,519,495 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	84,488,730 - 84,519,559 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	89,900,015 - 89,930,598 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	98,359,562 - 98,390,223 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	91,655,862 - 91,686,445 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	88,131,282 - 88,162,609 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	88,131,554 - 88,162,583 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	89,306,662 - 89,337,668 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	84,322,700 - 84,353,333 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	78,876,360 - 78,906,488 (-)	NCBI		Celera
RGSC_v3.1	1	84,403,467 - 84,431,556 (-)	NCBI
Cytogenetic Map	1	q21	NCBI

CATSPERG
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	38,335,830 - 38,370,943 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	38,335,775 - 38,370,943 (+)	Ensembl			hg38	GRCh38
GRCh37	19	38,826,470 - 38,861,583 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	43,518,298 - 43,553,422 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	19	43,518,297 - 43,553,422	NCBI
Celera	19	35,628,680 - 35,663,824 (+)	NCBI		Celera
Cytogenetic Map	19	q13.2	NCBI
HuRef	19	35,274,037 - 35,309,181 (+)	NCBI		HuRef
CHM1_1	19	38,826,802 - 38,861,930 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	41,138,006 - 41,173,115 (+)	NCBI		T2T-CHM13v2.0

Catsperg1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	28,880,957 - 28,915,013 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	28,880,746 - 28,913,460 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	7	29,181,532 - 29,215,589 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	29,181,321 - 29,214,035 (-)	Ensembl			mm10	GRCm38
MGSCv37	7	29,966,551 - 29,999,052 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	7	28,890,292 - 28,922,751 (-)	NCBI		MGSCv36	mm8
Celera	7	23,751,603 - 23,784,028 (-)	NCBI		Celera
Cytogenetic Map	7	B1	NCBI
cM Map	7	16.94	NCBI

Catsperg
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955468	1,056,197 - 1,099,804 (-)	NCBI	ChiLan1.0	ChiLan1.0

CATSPERG
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	44,626,423 - 44,661,963 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	46,496,790 - 46,532,327 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	35,429,358 - 35,464,896 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	44,002,172 - 44,034,329 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	44,003,610 - 44,034,323 (+)	Ensembl			panPan2	panpan1.1

CATSPERG
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	114,637,365 - 114,663,180 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	114,637,545 - 114,661,313 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	114,041,198 - 114,066,619 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	115,239,234 - 115,264,663 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	115,239,247 - 115,263,003 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	114,812,158 - 114,837,507 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	114,429,751 - 114,455,143 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	115,468,400 - 115,493,818 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Catsperg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	12,945,361 - 12,967,640 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936801	1,110,754 - 1,133,010 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936801	1,110,654 - 1,132,991 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CATSPERG
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	47,251,964 - 47,282,829 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	6	47,252,307 - 47,282,833 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	42,752,676 - 42,783,281 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CATSPERG
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	32,980,042 - 33,012,323 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	32,981,763 - 33,012,301 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666073	10,926,896 - 10,958,621 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Catsperg
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624794	11,805,390 - 11,834,007 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Catsperg
201 total Variants

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578649	Bmd8	Bone mineral density QTL 8	4.9		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	1	51940904	101229020	Rat
1582234	Gluco18	Glucose level QTL 18	3.4	0.0003	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	87889942	132889942	Rat
1358359	Sradr1	Stress Responsive Adrenal Weight QTL 1	4.74		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	39728272	132889942	Rat
634314	Niddm44	Non-insulin dependent diabetes mellitus QTL 44			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	51941022	208479811	Rat
1578654	Bss10	Bone structure and strength QTL 10	4		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	1	51940904	168768703	Rat
2300324	Fetw1	Fetal weight QTL 1	12.1	0.005	fetal growth trait (VT:0004201)	fetal body weight (CMO:0002080)	1	92963855	109494029	Rat
1331800	Scl25	Serum cholesterol level QTL 25	3.013		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	1	87785026	142582336	Rat
7421628	Bp361	Blood pressure QTL 361		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	83019780	128019780	Rat
631495	Bp96	Blood pressure QTL 96	4.52		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	66404680	111404680	Rat
70225	Bp58	Blood pressure QTL 58	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34184556	172281316	Rat
631512	Scl6	Serum cholesterol level QTL 6	9.6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	1	81269860	99645535	Rat
2298545	Neuinf8	Neuroinflammation QTL 8	4.6		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	1	66009857	160501508	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34565911	208798288	Rat
1302788	Scl19	Serum cholesterol QTL 19	4.6	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	66400974	132889942	Rat
1549903	Bp267	Blood pressure QTL 267			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	84107164	115183752	Rat
2313083	Bmd74	Bone mineral density QTL 74	4	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	1	91302413	136302413	Rat
2313402	Anxrr24	Anxiety related response QTL 24			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	1	51511344	153680016	Rat
61342	Bp27	Blood pressure QTL 27	3.4	0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	65405637	96805205	Rat
1358192	Ept13	Estrogen-induced pituitary tumorigenesis QTL 13	3.4		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	1	86622262	131622262	Rat
6903308	Scl36	Serum cholesterol QTL 36	2	0.0125	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	58769992	103769992	Rat
2300164	Bmd44	Bone mineral density QTL 44	5.4	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	1	66077886	111077886	Rat
738022	Anxrr13	Anxiety related response QTL 13	4.6	0.00039	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of, or within a discrete space in an open field apparatus (CMO:0001514)	1	92683681	137683681	Rat
152025249	Scl82	Serum cholesterol level QTL 82	4.77		blood cholesterol amount (VT:0000180)		1	52891222	109116986	Rat
10054135	Gmadr2	Adrenal mass QTL 2	1.97	0.0129	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	86993904	131993904	Rat
7411712	Strs4	Sensitivity to stroke QTL 4	8.7		cerebrum integrity trait (VT:0010549)	percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)	1	87558587	132558587	Rat
1331749	Hrtrt11	Heart rate QTL 11	2.973		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	1	92683681	137683681	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	66	161	91	90	59	90	59	6	353	189	11	140	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001170340	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008759124	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008759125	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008759126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008759127	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588909	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588910	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104318	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104333	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104337	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104339	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104350	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104359	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104365	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104375	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104379	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104386	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104388	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283507	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005501787	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010064605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010064606	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_590101	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_590102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC118147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC167101	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000027974 ⟹ ENSRNOP00000027973

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	93,636,966 - 93,661,618 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000072441 ⟹ ENSRNOP00000064640

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	93,630,894 - 93,641,928 (-)	Ensembl
mRatBN7.2 Ensembl	1	84,504,418 - 84,514,453 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000087411 ⟹ ENSRNOP00000073534

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	93,616,209 - 93,647,211 (-)	Ensembl
mRatBN7.2 Ensembl	1	84,488,730 - 84,519,559 (-)	Ensembl
Rnor_6.0 Ensembl	1	88,131,554 - 88,162,583 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099807 ⟹ ENSRNOP00000094167

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	84,488,730 - 84,519,559 (-)	Ensembl

RefSeq Acc Id:

NM_001170340 ⟹ NP_001163811

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,616,209 - 93,646,842 (-)	NCBI
mRatBN7.2	1	84,488,730 - 84,519,367 (-)	NCBI
Rnor_6.0	1	88,131,289 - 88,162,033 (-)	NCBI
Rnor_5.0	1	89,306,662 - 89,337,668 (-)	NCBI
RGSC_v3.4	1	84,322,700 - 84,353,333 (-)	RGD
Celera	1	78,876,360 - 78,906,488 (-)	RGD

Sequence:

show sequence

GTTTTAACCAAGTGACTGGTTCTAGCTACATGGTGTTCTGGCCAGCCATGTCCCCTGTCAGCCC
TGTGTGGCCGAGAAAACCAAACCTATGCGCATTCTGGGTACTGCGGCTAGTGCTATTGCTGTCG
CTGAAGTCGAGAACGGAAGGTACTTTACAGAATTGCCACTGGCTTGTTGTCCTGAACAAGTTCG
AGAATGTAGGCTTTCATCTCAGCAAGGATCGATTTCTGGAACACCAGCCTGTCGATACAGTGTC
TGAGGTGTTCAGTAAGTTGGTAGACTCGCCAGTTGATCCGCAAGAGAAATATTTGAGCTTTCCT
TACTACCTGCAAATCAACTTTACGTGTCCGGGAGAGGATAGCGAGGTGCTGGCCCGAAAGGGCC
ACCTGTTGGGGATGAAACCCATGATCCAAATCGACTACATACACTCAGTCAATTTCTACCGTTG
GAAGCCCGAGAATCTGCAGATCTTGTTGGAGGCTGCTCCAATGCTCAGCAGAGGGGACTGCCAC
GCGGAGGCCATGTGCATCCTGAACTGGTACACACCCATGCCCTTGAAAAACGGCTCGGTGGTCG
CCTCGGTGGAAGTCTACACCAATGGCATAGGACCCTTCATTCCCAGGAAAAGGTTCTTTGTAAA
TATGAATGGCTTCTTGAGGAAAGACGCAAGTGGTGCACCCGTCTTCACCGTAGGATATGAGAGC
CTTTCTCTGAAGCCGTCTCACTTTAGGCTCTCGAAATCAAGACCCCTGTGGTACACTATGGACC
ACACACCCGTCTTCATCCTTGGGGGCTTTGATAATGAAAAGGCCATCTTGCTCTCTGACAGTAA
TTTCCATGACTTTGTTCTCTTGGAGCTGAGTATTGATAGTTGCTGGGTCGGCTCCTATTACTGT
CCCATTCTTGGCTTCTCAGCCACTATCCATGACGCCATTGCCACCGAGAGCACGCTCTTCATTC
GACAGAACCAGCTCGTCTACTATTTCACAGGCACCTACACTACGCTCTTCGACAAGAGCCGCGG
CAGCAGAGGCTGGGTTCGTGTCCTGTCTAGCGAGTGCATCAAGAAACTGTGCCCGGTGTTTGTC
GGTGGCAATGGTTCTGAATATATCCTAGCCCTCACCACTGGCAAGAACGAGGGTTATATTCACA
TCGGGACCATCACAGATGGCCTCGTGTCCTTCCAAATGGTGCCGGATGGCTGGTCAATATGTGA
AAAGTTACCAGGTTTGAACTGCACCATTGAGTGGGCTGTATACATTGCCGATGAGAGGAACCTG
CTGCTGTTAGTAAAAACTGACTCTGTGCAGTTTTACCTAGTCAACTTCAATTTAGAGCTCAAGA
CTCTGCACATTCTCTACAAAATACCAGAGTTTATCCCTGAAGCTCAGAACCTGGACTTCTTGGT
GCTCCTTGGTACAGAGACTTACACCGACACTCCTATGATTCCCCAGGGCTTGTACTTCAACACA
CTGAACAACGTGCTGTACATTTGGGGCAATTTCATCCTGCAAAGTTACAATAGGGAACACTTCA
TTTTTCTGGCGGACTTCCCCAAGGAGTCCACCATCAAATACATGCTCAACTCTTACAAGGGACA
TATAACTTTTGTCACAGAAGATGAAGAGATCTGGTACTTTCTGGAAGGTGGCTATGACGTATAC
AGGATAGTCCCATCCCAAGGCTGGAACACCTACTTTAACCTGCAGAAGCTGGAAAAGTCGCCCC
TCTATTCAAATGATGAGACCTTGGTCTCCCTCTTCTACGAGAAGAATCATCTCTATGAGCTGGT
GTATCTTTTTGACAACGGAAAAGAGCGTTTGGTCAGGAGGTTCTTGCCTGTGGGGAAGTTGATG
GAGTATGACCTGCCCAAACCCTTCAAAATAGGGAGCCAACGGGAGAACAAGATAATCTCCTTCG
AATACATCTGCCCCTTCAAGGAAATTCATCTACTTGATGTACCCCAAAAACAGCATGTGGAACG
CAAGGAGAGCTACCTTGCCCTACCGCCTCTGGTCTCTGAATCCTCGGGCTTCCACAACAATTAC
ACGCTTGCCGTCTATCAAGGCCTTGTCTATTACCTGCTGTGGCTACACGCCAAGTACAATAAGC
CCTACGCGGACCCAGTGCATGATCCCACCTGGCGCTGGTGGCAACACAAAATAGTGTACAAGGA
TTACTACTTTTACCTGTTCAGCAACCGGCTGACAGCGGAAGGCATGTATATCAACATGAATGCC
TACCAAAAGCTGTACAACCTCTCCAGCGATTACTCGATGGCCGACTTTGTCTTCCTAGACAAGG
GCAACTGGTTTAGCATCACTGCAGCCTTATTGTCGCATCAGGACACCTTCACAAGCGCTGATAG
CCCAGGAGCCGGTCTTGAAGTGGATAGGAAGCTGGCAGTGTCTGTGATACTGGCGGATCCTGAG
TGCCTTTCATCGTCTGTGACTCAGGAGATCCATCTTAATCGAAACCTATTGCTCTTCAAGATTA
AAATCACAGACAAAAGGAAATGCTCTGAACAGGGAATAACTGGACGTAACCTGAAAAAGACTTC
TATGTTGATCAAGGTACTGGGCGCTTCGGGGAAATGCTTCCAAGCCACAACCCTTGACACGATC
ATTCGAGGTTTCCTGATGACGAAAATATTCATCGGCTGTCCACCTGGCAAGCGTCTGGCCTTCG
ATGTCTCCTACACAGTTATGCATTCCCAGAAGATAAACAAGCACTATCTTGACTGTGTGGTCAA
GGACCCCGAGATGCCGTGCTTCCTCTTTCGTGACTTATTCCAGCCCTTCTTCTTAGTCCAGGAC
TTAGTGACGGGAGACTCTGGCAGCTTCTTGGGCAGTTATGTGCTGAAGGTGGTGGGCGGTGGTC
GCACAGAAGAAACCATCAAAGACTACACAGAAGAGGAAATCTTCCGTTACAACAGCCCGCTGGA
CACAACGAAAAGTCTCATCTGGAAAACCAAAGCTGAAAGGACCACCAGTGACAACAAGTTCTAC
ATAATGTCCCATAAGAGCCCCGGAATAGAGTGGCTGTGTTCGGAGAACTCCCCTTGCTACGACA
TCATCCCCACAGACATCTTTCCACCTGAATTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGT
AGACGACAGCACATACTGTGACTACCAGCTCACCTTCATAGTGCACATCCACGGGCTGCCGCTC
AGCAGCAAACGGTCCTCCTTCACTTTTGTCGTGTCCTCCACCATCTTTCTAGGCTTGGTGGTCC
TCTACATCCTGTTCTGCCTCCTGTGGCCTCACATATCGAGGGCCTGGGCCTCACTACGCTGGAG
GATTAACAACATCATGGCGTCCGAGTCCTACTTCACATACGCCACCTCCACTGCGGGCTTCAGC
CTCCAGTCCCACAGCTCAGAAGAAAGTTTCAAGGGTCCCCCCAGAGTAGATTCCAAAGAAGGCA
ATGTTCAAGCTAAGAAAGCATAGGTGGAGGGGTTGGGGATTTAGCTCAGCGGTAGAGCGCTTGC
CTAGCAAGCGTGAGGCCCTGGGTTCAGTCCCCAGCTCCGGGGGGAAAAAAAAAAGAAAAAAAAA
AAGAAAAAAGAAAAAAAAAAGAGAAAAAAAAAAAAAGAAAAAAAGAAAGAAAAAAAAAGAAAAA
AAAGAAAAAAAAAAAAAAAAAGAAAGCATAGGTGGCCTGAATCGCTGGTCTTGTCTTCCTTATA
AACTGTTAGGCCTCTCCTCCTGGGGACGAATGCAGCCTTACACCTACCCAGGATCTTCTGGTTT
GCTAGAATGTTCATGTCTCTCTCAGACCCTAATAAAGCCTCATTTCAGTACCA

hide sequence

RefSeq Acc Id:

XM_006228722 ⟹ XP_006228784

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,616,209 - 93,646,970 (-)	NCBI
mRatBN7.2	1	84,488,728 - 84,519,494 (-)	NCBI
Rnor_6.0	1	88,131,289 - 88,162,608 (-)	NCBI
Rnor_5.0	1	89,306,662 - 89,337,668 (-)	NCBI

Sequence:

show sequence

GTGCACCATTTAAGTGCCCGGCAAGGTTGTTATCCAGTTCACAGTGTGGCTGATCAGAGACATG
ACTCTGGTCCTATTTGTGTGACCAGTAACTAAAGTTTTGGCCCTTTGTTTTTACAGGCTGTTGA
CTAGAGAGGCCTAACTCTAAGTTGGCTAATATTTAACTAGCTTCCTAATTGAATGTGATCTGCC
CACTTCCAGATCACATTAGCTCAATCCCACAAAGGTTCTGGAAAATCTTTTTTCCTCGGGAGAA
GTTTTGATCTAGAGGTCAAGCAGGCACAGTGCCTCTGTCAGAACAACCGTTATAAATTCCTCCG
TGGCCTTCTGAGCACAAAGCTACCGATTTCAGCTTTTTTTTTTTTTTTTTTTTTTGCGGGCCAC
ACACCTGTGAGCCTGACTTGCTCAAGCCTTGTTCTCAAGCCCTTAAGCGCCTGTTGGGGACTGG
GGGGTGCGCGCTGCCATGGAAACGCGCGCGCCACACAGGCGTGCCTCGCGCAAGGTGGAAGTCC
AAGCGGCCATTTTAGGAGCTGGCCAGAGGGGTAGAACAGGCGCTGCCAAGCAACGGTTGACCGG
TTTTAACCAAGTGACTGGTTCTAGCTACATGGTGTTCTGGCCAGCCATGTCCCCTGTCAGCCCT
GTGTGGCCGAGAAAACCAAACCTATGCGCATTCTGGGTACTGCGGCTAGTGCTATTGCTGTCGC
TGAAGTCGAGAACGGAAGGTACTTTACAGAATTGCCACTGGCTTGTTGTCCTGAACAAGTTCGA
GAATGTAGGCTTTCATCTCAGCAAGGATCGATTTCTGGAACACCAGCCTGTCGATACAGTGTCT
GAGGTGTTCAGTAAGTTGGTAGACTCGCCAGTTGATCCGCAAGAGAAATATTTGAGCTTTCCTT
ACTACCTGCAAATCAACTTTACGTGTCCGGGAGAGGATAGCGAGGTGCTGGCCCGAAAGGGCCA
CCTGTTGGGGATGAAACCCATGATCCAAATCGACTACATACACTCAGTCAATTTCTACCGTTGG
AAGCCCGAGAATCTGCAGATCTTGTTGGAGGCTGCTCCAATGCTCAGCAGAGCAGGGGACTGCC
ACGCGGAGGCCATGTGCATCCTGAACTGGTACACACCCATGCCCTTGAAAAACGGCTCGGTGGT
CGCCTCGGTGGAAGTCTACACCAATGGCATAGGACCCTTCATTCCCAGGAAAAGGTTCTTTGTA
AATATGAATGGCTTCTTGAGGAAAGACGCAAGTGGTGCACCCGTCTTCACCGTAGGATATGAGA
GCCTTTCTCTGAAGCCGTCTCACTTTAGGCTCTCGAAATCAAGACCCCTGTGGTACACTATGGA
CCACACACCCGTCTTCATCCTTGGGGGCTTTGATAATGAAAAGGCCATCTTGCTCTCTGACAGT
AATTTCCATGACTTTGTTCTCTTGGAGCTGAGTATTGATAGTTGCTGGGTCGGCTCCTATTACT
GTCCCATTCTTGGCTTCTCAGCCACTATCCATGACGCCATTGCCACCGAGAGCACGCTCTTCAT
TCGACAGAACCAGCTCGTCTACTATTTCACAGGCACCTACACTACGCTCTTCGACAAGAGCCGC
GGCAGCAGAGGCTGGGTTCGTGTCCTGTCTAGCGAGTGCATCAAGAAACTGTGCCCGGTGTTTG
TCGGTGGCAATGGTTCTGAATATATCCTAGCCCTCACCACTGGCAAGAACGAGGGTTATATTCA
CATCGGGACCATCACAGATGGCCTCGTGTCCTTCCAAATGGTGCCGGATGGCTGGTCAATATGT
GAAAAGTTACCAGGTTTGAACTGCACCATTGAGTGGGCTGTATACATTGCCGATGAGAGGAACC
TGCTGCTGTTAGTAAAAACTGACTCTGTGCAGTTTTACCTAGTCAACTTCAATTTAGAGCTCAA
GACTCTGCACATTCTCTACAAAATACCAGAGTTTATCCCTGAAGCTCAGAACCTGGACTTCTTG
GTGCTCCTTGGTACAGAGACTTACACCGACACTCCTATGATTCCCCAGGGCTTGTACTTCAACA
CACTGAACAACGTGCTGTACATTTGGGGCAATTTCATCCTGCAAAGTTACAATAGGGAACACTT
CATTTTTCTGGCGGACTTCCCCAAGGAGTCCACCATCAAATACATGCTCAACTCTTACAAGGGA
CATATAACTTTTGTCACAGAAGATGAAGAGATCTGGTACTTTCTGGAAGGTGGCTATGACGTAT
ACAGGATAGTCCCATCCCAAGGCTGGAACACCTACTTTAACCTGCAGAAGCTGGAAAAGTCGCC
CCTCTATTCAAATGATGAGACCTTGGTCTCCCTCTTCTACGAGAAGAATCATCTCTATGAGCTG
GTGTATCTTTTTGACAACGGAAAAGAGCGTTTGGTCAGGAGGTTCTTGCCTGTGGGGAAGTTGA
TGGAGTATGACCTGCCCAAACCCTTCAAAATAGGGAGCCAACGGGAGAACAAGATAATCTCCTT
CGAATACATCTGCCCCTTCAAGGAAATTCATCTACTTGATGTACCCCAAAAACAGCATGTGGAA
CGCAAGGAGAGCTACCTTGCCCTACCGCCTCTGGTCTCTGAATCCTCGGGCTTCCACAACAATT
ACACGCTTGCCGTCTATCAAGGCCTTGTCTATTACCTGCTGTGGCTACACGCCAAGTACAATAA
GCCCTACGCGGACCCAGTGCATGATCCCACCTGGCGCTGGTGGCAACACAAAATAGTGTACAAG
GATTACTACTTTTACCTGTTCAGCAACCGGCTGACAGCGGAAGGCATGTATATCAACATGAATG
CCTACCAAAAGCTGTACAACCTCTCCAGCGATTACTCGATGGCCGACTTTGTCTTCCTAGACAA
GGGCAACTGGTTTAGCATCACTGCAGCCTTATTGTCGCATCAGGACACCTTCACAAGCGCTGAT
AGCCCAGGAGCCGGTCTTGAAGTGGATAGGAAGCTGGCAGTGTCTGTGATACTGGCGGATCCTG
AGTGCCTTTCATCGTCTGTGACTCAGGAGATCCATCTTAATCGAAACCTATTGCTCTTCAAGAT
TAAAATCACAGACAAAAGGAAATGCTCTGAACAGGGAATAACTGGACGTAACCTGAAAAAGACT
TCTATGTTGATCAAGGTACTGGGCGCTTCGGGGAAATGCTTCCAAGCCACAACCCTTGACACGA
TCATTCGAGGTTTCCTGATGACGAAAATATTCATCGGCTGTCCACCTGGCAAGCGTCTGGCCTT
CGATGTCTCCTACACAGTTATGCATTCCCAGAAGATAAACAAGCACTATCTTGACTGTGTGGTC
AAGGACCCCGAGATGCCGTGCTTCCTCTTTCGTGACTTATTCCAGCCCTTCTTCTTAGTCCAGG
ACTTAGTGACGGGAGACTCTGGCAGCTTCTTGGGCAGTTATGTGCTGAAGGTGGTGGGCGGTGG
TCGCACAGAAGAAACCATCAAAGACTACACAGAAGAGGAAATCTTCCGTTACAACAGCCCGCTG
GACACAACGAAAAGTCTCATCTGGAAAACCAAAGCTGAAAGGACCACCAGTGACAACAAGTTCT
ACATAATGTCCCATAAGAGCCCCGGAATAGAGTGGCTGTGTTCGGAGAACTCCCCTTGCTACGA
CATCATCCCCACAGACATCTTTCCACCTGAATTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGT
GTAGACGACAGCACATACTGTGACTACCAGCTCACCTTCATAGTGCACATCCACGGGCTGCCGC
TCAGCAGCAAACGGTCCTCCTTCACTTTTGTCGTGTCCTCCACCATCTTTCTAGGCTTGGTGGT
CCTCTACATCCTGTTCTGCCTCCTGTGGCCTCACATATCGAGGGCCTGGGCCTCACTACGCTGG
AGGATTAACAACATCATGGCGTCCGAGTCCTACTTCACATACGCCACCTCCACTGCGGGCTTCA
GCCTCCAGTCCCACAGCTCAGAAGAAAGTTTCAAGGGTCCCCCCAGAGTAGATTCCAAAGAAGG
CAATGTTCAAGCTAAGAAAGCATAGGTGGAGGGGTTGGGGATTTAGCTCAGCGGTAGAGCGCTT
GCCTAGCAAGCGTGAGGCCCTGGGTTCAGTCCCCAGCTCCGGGGGGAAAAAAAAAAGAAAAAAA
AAAAGAAAAAAGAAAAAAAAAAGAGAAAAAAAAAAAAAGAAAAAAAGAAAGAAAAAAAAAGAAA
AAAAAGAAAAAAAAAAAAAAAAAGAAAGCATAGGTGGCCTGAATCGCTGGTCTTGTCTTCCTTA
TAAACTGTTAGGCCTCTCCTCCTGGGGACGAATGCAGCCTTACACCTACCCAGGATCTTCTGGT
TTGCTAGAATGTTCATGTCTCTCTCAGACCCTAATAAAGCCTCATTTCAGTACCA

hide sequence

RefSeq Acc Id:

XM_008759124 ⟹ XP_008757346

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,616,209 - 93,646,970 (-)	NCBI
mRatBN7.2	1	84,488,975 - 84,519,494 (-)	NCBI
Rnor_6.0	1	88,131,282 - 88,162,608 (-)	NCBI

Sequence:

show sequence

GTGCACCATTTAAGTGCCCGGCAAGGTTGTTATCCAGTTCACAGTGTGGCTGATCAGAGACATG
ACTCTGGTCCTATTTGTGTGACCAGTAACTAAAGTTTTGGCCCTTTGTTTTTACAGGCTGTTGA
CTAGAGAGGCCTAACTCTAAGTTGGCTAATATTTAACTAGCTTCCTAATTGAATGTGATCTGCC
CACTTCCAGATCACATTAGCTCAATCCCACAAAGGTTCTGGAAAATCTTTTTTCCTCGGGAGAA
GTTTTGATCTAGAGGTCAAGCAGGCACAGTGCCTCTGTCAGAACAACCGTTATAAATTCCTCCG
TGGCCTTCTGAGCACAAAGCTACCGATTTCAGCTTTTTTTTTTTTTTTTTTTTTTGCGGGCCAC
ACACCTGTGAGCCTGACTTGCTCAAGCCTTGTTCTCAAGCCCTTAAGCGCCTGTTGGGGACTGG
GGGGTGCGCGCTGCCATGGAAACGCGCGCGCCACACAGGCGTGCCTCGCGCAAGGTGGAAGTCC
AAGCGGCCATTTTAGGAGCTGGCCAGAGGGGTAGAACAGGCGCTGCCAAGCAACGGTTGACCGG
TTTTAACCAAGTGACTGGTTCTAGCTACATGGTGTTCTGGCCAGCCATGTCCCCTGTCAGCCCT
GTGTGGCCGAGAAAACCAAACCTATGCGCATTCTGGGTACTGCGGCTAGTGCTATTGCTGTCGC
TGAAGTCGAGAACGGAAGGTACTTTACAGAATTGCCACTGGCTTGTTGTCCTGAACAAGTTCGA
GAATGTAGGCTTTCATCTCAGCAAGGATCGATTTCTGGAACACCAGCCTGTCGATACAGTGTCT
GAGGTGTTCAGTAAGTTGGTAGACTCGCCAGTTGATCCGCAAGAGAAATATTTGAGCTTTCCTT
ACTACCTGCAAATCAACTTTACGTGTCCGGGAGAGGTGAGAGTTTACAGTGTGAGTGGACTGAT
TTCTGATAGCGAGGTGCTGGCCCGAAAGGGCCACCTGTTGGGGATGAAACCCATGATCCAAATC
GACTACATACACTCAGTCAATTTCTACCGTTGGAAGCCCGAGAATCTGCAGATCTTGTTGGAGG
CTGCTCCAATGCTCAGCAGAGCAGGGGACTGCCACGCGGAGGCCATGTGCATCCTGAACTGGTA
CACACCCATGCCCTTGAAAAACGGCTCGGTGGTCGCCTCGGTGGAAGTCTACACCAATGGCATA
GGACCCTTCATTCCCAGGAAAAGGTTCTTTGTAAATATGAATGGCTTCTTGAGGAAAGACGCAA
GTGGTGCACCCGTCTTCACCGTAGGATATGAGAGCCTTTCTCTGAAGCCGTCTCACTTTAGGCT
CTCGAAATCAAGACCCCTGTGGTACACTATGGACCACACACCCGTCTTCATCCTTGGGGGCTTT
GATAATGAAAAGGCCATCTTGCTCTCTGACAGTAATTTCCATGACTTTGTTCTCTTGGAGCTGA
GTATTGATAGTTGCTGGGTCGGCTCCTATTACTGTCCCATTCTTGGCTTCTCAGCCACTATCCA
TGACGCCATTGCCACCGAGAGCACGCTCTTCATTCGACAGAACCAGCTCGTCTACTATTTCACA
GGCACCTACACTACGCTCTTCGACAAGAGCCGCGGCAGCAGAGGCTGGGTTCGTGTCCTGTCTA
GCGAGTGCATCAAGAAACTGTGCCCGGTGTTTGTCGGTGGCAATGGTTCTGAATATATCCTAGC
CCTCACCACTGGCAAGAACGAGGGTTATATTCACATCGGGACCATCACAGATGGCCTCGTGTCC
TTCCAAATGGTGCCGGATGGCTGGTCAATATGTGAAAAGTTACCAGGTTTGAACTGCACCATTG
AGTGGGCTGTATACATTGCCGATGAGAGGAACCTGCTGCTGTTAGTAAAAACTGACTCTGTGCA
GTTTTACCTAGTCAACTTCAATTTAGAGCTCAAGACTCTGCACATTCTCTACAAAATACCAGAG
TTTATCCCTGAAGCTCAGAACCTGGACTTCTTGGTGCTCCTTGGTACAGAGACTTACACCGACA
CTCCTATGATTCCCCAGGGCTTGTACTTCAACACACTGAACAACGTGCTGTACATTTGGGGCAA
TTTCATCCTGCAAAGTTACAATAGGGAACACTTCATTTTTCTGGCGGACTTCCCCAAGGAGTCC
ACCATCAAATACATGCTCAACTCTTACAAGGGACATATAACTTTTGTCACAGAAGATGAAGAGA
TCTGGTACTTTCTGGAAGGTGGCTATGACGTATACAGGATAGTCCCATCCCAAGGCTGGAACAC
CTACTTTAACCTGCAGAAGCTGGAAAAGTCGCCCCTCTATTCAAATGATGAGACCTTGGTCTCC
CTCTTCTACGAGAAGAATCATCTCTATGAGCTGGTGTATCTTTTTGACAACGGAAAAGAGCGTT
TGGTCAGGAGGTTCTTGCCTGTGGGGAAGTTGATGGAGTATGACCTGCCCAAACCCTTCAAAAT
AGGGAGCCAACGGGAGAACAAGATAATCTCCTTCGAATACATCTGCCCCTTCAAGGAAATTCAT
CTACTTGATGTACCCCAAAAACAGCATGTGGAACGCAAGGAGAGCTACCTTGCCCTACCGCCTC
TGGTCTCTGAATCCTCGGGCTTCCACAACAATTACACGCTTGCCGTCTATCAAGGCCTTGTCTA
TTACCTGCTGTGGCTACACGCCAAGTACAATAAGCCCTACGCGGACCCAGTGCATGATCCCACC
TGGCGCTGGTGGCAACACAAAATAGTGTACAAGGATTACTACTTTTACCTGTTCAGCAACCGGC
TGACAGCGGAAGGCATGTATATCAACATGAATGCCTACCAAAAGCTGTACAACCTCTCCAGCGA
TTACTCGATGGCCGACTTTGTCTTCCTAGACAAGGGCAACTGGTTTAGCATCACTGCAGCCTTA
TTGTCGCATCAGGACACCTTCACAAGCGCTGATAGCCCAGGAGCCGGTCTTGAAGTGGATAGGA
AGCTGGCAGTGTCTGTGATACTGGCGGATCCTGAGTGCCTTTCATCGTCTGTGACTCAGGAGAT
CCATCTTAATCGAAACCTATTGCTCTTCAAGATTAAAATCACAGACAAAAGGAAATGCTCTGAA
CAGGGAATAACTGGACGTAACCTGAAAAAGACTTCTATGTTGATCAAGGTACTGGGCGCTTCGG
GGAAATGCTTCCAAGCCACAACCCTTGACACGATCATTCGAGGTTTCCTGATGACGAAAATATT
CATCGGCTGTCCACCTGGCAAGCGTCTGGCCTTCGATGTCTCCTACACAGTTATGCATTCCCAG
AAGATAAACAAGCACTATCTTGACTGTGTGGTCAAGGACCCCGAGATGCCGTGCTTCCTCTTTC
GTGACTTATTCCAGCCCTTCTTCTTAGTCCAGGACTTAGTGACGGGAGACTCTGGCAGCTTCTT
GGGCAGTTATGTGCTGAAGGTGGTGGGCGGTGGTCGCACAGAAGAAACCATCAAAGACTACACA
GAAGAGGAAATCTTCCGTTACAACAGCCCGCTGGACACAACGAAAAGTCTCATCTGGAAAACCA
AAGCTGAAAGGACCACCAGTGACAACAAGTTCTACATAATGTCCCATAAGAGCCCCGGAATAGA
GTGGCTGTGTTCGGAGAACTCCCCTTGCTACGACATCATCCCCACAGACATCTTTCCACCTGAA
TTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACGACAGCACATACTGTGACTACCAGC
TCACCTTCATAGTGCACATCCACGGGCTGCCGCTCAGCAGCAAACGGTCCTCCTTCACTTTTGT
CGTGTCCTCCACCATCTTTCTAGGCTTGGTGGTCCTCTACATCCTGTTCTGCCTCCTGTGGCCT
CACATATCGAGGGCCTGGGCCTCACTACGCTGGAGGATTAACAACATCATGGCGTCCGAGTCCT
ACTTCACATACGCCACCTCCACTGCGGGCTTCAGCCTCCAGTCCCACAGCTCAGAAGAAAGTTT
CAAGGGTCCCCCCAGAGTAGATTCCAAAGAAGGCAATGTTCAAGCTAAGAAAGCATAGGTGGAG
GGGTTGGGGATTTAGCTCAGCGGTAGAGCGCTTGCCTAGCAAGCGTGAGGCCCTGGGTTCAGTC
CCCAGCTCCGGGGGGAAAAAAAAAAGAAAAAAAAAAAGAAAAAAGAAAAAAAAAAGAGAAAAAA
AAAAAAAGAAAAAAAGAAAGAAAAAAAAAGAAAAAAAAGAAAAAAAAAAAAAAAAAGAAAGCAT
AGGTGGCCTGAATCGCTGGTCTTGTCTTCCTTATAAACTGTTAGGCCTCTCCTCCTGGGGACGA
ATGCAGCCTTACACCTACCCAGGATCTTCTGGTTTGCTAGAATGTTCATGTCTCTCTCAGACCC
TAATAAAGCCTCATTTCAGTACCAGTCCCAA

hide sequence

RefSeq Acc Id:

XM_008759126 ⟹ XP_008757348

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,616,209 - 93,646,970 (-)	NCBI
mRatBN7.2	1	84,489,080 - 84,519,495 (-)	NCBI
Rnor_6.0	1	88,131,639 - 88,162,609 (-)	NCBI

Sequence:

show sequence

TGTGCACCATTTAAGTGCCCGGCAAGGTTGTTATCCAGTTCACAGTGTGGCTGATCAGAGACAT
GACTCTGGTCCTATTTGTGTGACCAGTAACTAAAGTTTTGGCCCTTTGTTTTTACAGGCTGTTG
ACTAGAGAGGCCTAACTCTAAGTTGGCTAATATTTAACTAGCTTCCTAATTGAATGTGATCTGC
CCACTTCCAGATCACATTAGCTCAATCCCACAAAGGTTCTGGAAAATCTTTTTTCCTCGGGAGA
AGTTTTGATCTAGAGGTCAAGCAGGCACAGTGCCTCTGTCAGAACAACCGTTATAAATTCCTCC
GTGGCCTTCTGAGCACAAAGCTACCGATTTCAGCTTTTTTTTTTTTTTTTTTTTTTGCGGGCCA
CACACCTGTGAGCCTGACTTGCTCAAGCCTTGTTCTCAAGCCCTTAAGCGCCTGTTGGGGACTG
GGGGGTGCGCGCTGCCATGGAAACGCGCGCGCCACACAGGCGTGCCTCGCGCAAGGTGGAAGTC
CAAGCGGCCATTTTAGGAGCTGGCCAGAGGGGTAGAACAGGCGCTGCCAAGCAACGGTTGACCG
GTTTTAACCAAGTGACTGGTTCTAGCTACATGGTGTTCTGGCCAGCCATGTCCCCTGTCAGCCC
TGTGTGGCCGAGAAAACCAAACCTATGCGCATTCTGGGTACTGCGGCTAGTGCTATTGCTGTCG
CTGAAGTCGAGAACGGAAGGTACTTTACAGAATTGCCACTGGCTTGTTGTCCTGAACAAGTTCG
AGAATGTAGGCTTTCATCTCAGCAAGGATCGATTTCTGGAACACCAGCCTGTCGATACAGTGTC
TGAGGTGTTCAGTAAGTTGGTAGACTCGCCAGTTGATCCGCAAGAGAAATATTTGAGCTTTCCT
TACTACCTGCAAATCAACTTTACGTGTCCGGGAGAGGTGAGAGTTTACAGTGTGAGTGGACTGA
TTTCTGATAGCGAGGTGCTGGCCCGAAAGGGCCACCTGTTGGGGATGAAACCCATGATCCAAAT
CGACTACATACACTCAGTCAATTTCTACCGTTGGAAGCCCGAGAATCTGCAGATCTTGTTGGAG
GCTGCTCCAATGCTCAGCAGAGCAGGGGACTGCCACGCGGAGGCCATGTGCATCCTGAACTGGT
ACACACCCATGCCCTTGAAAAACGGCTCGGTGGTCGCCTCGGTGGAAGTCTACACCAATGGCAT
AGGACCCTTCATTCCCAGGAAAAGGTTCTTTGTAAATATGAATGGCTTCTTGAGGAAAGACGCA
AGTGGTGCACCCGTCTTCACCGTAGGATATGAGAGCCTTTCTCTGAAGCCGTCTCACTTTAGGC
TCTCGAAATCAAGACCCCTGTGGTACACTATGGACCACACACCCGTCTTCATCCTTGGGGGCTT
TGATAATGAAAAGGCCATCTTGCTCTCTGACAGTAATTTCCATGACTTTGTTCTCTTGGAGCTG
AGTATTGATAGTTGCTGGGTCGGCTCCTATTACTGTCCCATTCTTGGCTTCTCAGCCACTATCC
ATGACGCCATTGCCACCGAGAGCACGCTCTTCATTCGACAGAACCAGCTCGTCTACTATTTCAC
AGGCACCTACACTACGCTCTTCGACAAGAGCCGCGGCAGCAGAGGCTGGGTTCGTGTCCTGTCT
AGCGAGTGCATCAAGAAACTGTGCCCGGTGTTTGTCGGTGGCAATGGTTCTGAATATATCCTAG
CCCTCACCACTGGCAAGAACGAGGGTTATATTCACATCGGGACCATCACAGATGGCCTCGTGTC
CTTCCAAATGGTGCCGGATGGCTGGTCAATATGTGAAAAGTTACCAGAGCTCAAGACTCTGCAC
ATTCTCTACAAAATACCAGAGTTTATCCCTGAAGCTCAGAACCTGGACTTCTTGGTGCTCCTTG
GTACAGAGACTTACACCGACACTCCTATGATTCCCCAGGGCTTGTACTTCAACACACTGAACAA
CGTGCTGTACATTTGGGGCAATTTCATCCTGCAAAGTTACAATAGGGAACACTTCATTTTTCTG
GCGGACTTCCCCAAGGAGTCCACCATCAAATACATGCTCAACTCTTACAAGGGACATATAACTT
TTGTCACAGAAGATGAAGAGATCTGGTACTTTCTGGAAGGTGGCTATGACGTATACAGGATAGT
CCCATCCCAAGGCTGGAACACCTACTTTAACCTGCAGAAGCTGGAAAAGTCGCCCCTCTATTCA
AATGATGAGACCTTGGTCTCCCTCTTCTACGAGAAGAATCATCTCTATGAGCTGGTGTATCTTT
TTGACAACGGAAAAGAGCGTTTGGTCAGGAGGTTCTTGCCTGTGGGGAAGTTGATGGAGTATGA
CCTGCCCAAACCCTTCAAAATAGGGAGCCAACGGGAGAACAAGATAATCTCCTTCGAATACATC
TGCCCCTTCAAGGAAATTCATCTACTTGATGTACCCCAAAAACAGCATGTGGAACGCAAGGAGA
GCTACCTTGCCCTACCGCCTCTGGTCTCTGAATCCTCGGGCTTCCACAACAATTACACGCTTGC
CGTCTATCAAGGCCTTGTCTATTACCTGCTGTGGCTACACGCCAAGTACAATAAGCCCTACGCG
GACCCAGTGCATGATCCCACCTGGCGCTGGTGGCAACACAAAATAGTGTACAAGGATTACTACT
TTTACCTGTTCAGCAACCGGCTGACAGCGGAAGGCATGTATATCAACATGAATGCCTACCAAAA
GCTGTACAACCTCTCCAGCGATTACTCGATGGCCGACTTTGTCTTCCTAGACAAGGGCAACTGG
TTTAGCATCACTGCAGCCTTATTGTCGCATCAGGACACCTTCACAAGCGCTGATAGCCCAGGAG
CCGGTCTTGAAGTGGATAGGAAGCTGGCAGTGTCTGTGATACTGGCGGATCCTGAGTGCCTTTC
ATCGTCTGTGACTCAGGAGATCCATCTTAATCGAAACCTATTGCTCTTCAAGATTAAAATCACA
GACAAAAGGAAATGCTCTGAACAGGGAATAACTGGACGTAACCTGAAAAAGACTTCTATGTTGA
TCAAGGTACTGGGCGCTTCGGGGAAATGCTTCCAAGCCACAACCCTTGACACGATCATTCGAGG
TTTCCTGATGACGAAAATATTCATCGGCTGTCCACCTGGCAAGCGTCTGGCCTTCGATGTCTCC
TACACAGTTATGCATTCCCAGAAGATAAACAAGCACTATCTTGACTGTGTGGTCAAGGACCCCG
AGATGCCGTGCTTCCTCTTTCGTGACTTATTCCAGCCCTTCTTCTTAGTCCAGGACTTAGTGAC
GGGAGACTCTGGCAGCTTCTTGGGCAGTTATGTGCTGAAGGTGGTGGGCGGTGGTCGCACAGAA
GAAACCATCAAAGACTACACAGAAGAGGAAATCTTCCGTTACAACAGCCCGCTGGACACAACGA
AAAGTCTCATCTGGAAAACCAAAGCTGAAAGGACCACCAGTGACAACAAGTTCTACATAATGTC
CCATAAGAGCCCCGGAATAGAGTGGCTGTGTTCGGAGAACTCCCCTTGCTACGACATCATCCCC
ACAGACATCTTTCCACCTGAATTCTTCTTCAAGTTGTTAGTGAGCAATAGAGGTGTAGACGACA
GCACATACTGTGACTACCAGCTCACCTTCATAGTGCACATCCACGGGCTGCCGCTCAGCAGCAA
ACGGTCCTCCTTCACTTTTGTCGTGTCCTCCACCATCTTTCTAGGCTTGGTGGTCCTCTACATC
CTGTTCTGCCTCCTGTGGCCTCACATATCGAGGGCCTGGGCCTCACTACGCTGGAGGATTAACA
ACATCATGGCGTCCGAGTCCTACTTCACATACGCCACCTCCACTGCGGGCTTCAGCCTCCAGTC
CCACAGCTCAGAAGAAAGTTTCAAGGGTCCCCCCAGAGTAGATTCCAAAGAAGGCAATGTTCAA
GCTAAGAAAGCATAG

hide sequence

RefSeq Acc Id:

XM_039104318 ⟹ XP_038960246

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,616,209 - 93,646,970 (-)	NCBI
mRatBN7.2	1	84,488,728 - 84,519,494 (-)	NCBI

RefSeq Acc Id:

XM_039104333 ⟹ XP_038960261

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,616,209 - 93,646,970 (-)	NCBI
mRatBN7.2	1	84,489,080 - 84,519,494 (-)	NCBI

RefSeq Acc Id:

XM_039104337 ⟹ XP_038960265

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,616,209 - 93,646,970 (-)	NCBI
mRatBN7.2	1	84,489,080 - 84,519,494 (-)	NCBI

RefSeq Acc Id:

XM_039104339 ⟹ XP_038960267

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,616,209 - 93,646,970 (-)	NCBI
mRatBN7.2	1	84,489,080 - 84,519,495 (-)	NCBI

RefSeq Acc Id:

XM_039104350 ⟹ XP_038960278

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,616,209 - 93,646,919 (-)	NCBI
mRatBN7.2	1	84,489,080 - 84,519,443 (-)	NCBI

RefSeq Acc Id:

XM_039104359 ⟹ XP_038960287

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,616,209 - 93,646,890 (-)	NCBI
mRatBN7.2	1	84,489,080 - 84,519,395 (-)	NCBI

RefSeq Acc Id:

XM_039104365 ⟹ XP_038960293

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,616,209 - 93,646,890 (-)	NCBI
mRatBN7.2	1	84,489,080 - 84,519,367 (-)	NCBI

RefSeq Acc Id:

XM_039104372 ⟹ XP_038960300

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,616,209 - 93,637,188 (-)	NCBI
mRatBN7.2	1	84,489,080 - 84,509,710 (-)	NCBI

RefSeq Acc Id:

XM_039104375 ⟹ XP_038960303

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,616,209 - 93,635,975 (-)	NCBI
mRatBN7.2	1	84,489,080 - 84,508,494 (-)	NCBI

RefSeq Acc Id:

XM_039104379 ⟹ XP_038960307

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,616,209 - 93,635,976 (-)	NCBI
mRatBN7.2	1	84,489,080 - 84,508,496 (-)	NCBI

RefSeq Acc Id:

XM_039104386 ⟹ XP_038960314

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,629,303 - 93,646,970 (-)	NCBI
mRatBN7.2	1	84,501,827 - 84,519,495 (-)	NCBI

RefSeq Acc Id:

XM_039104388 ⟹ XP_038960316

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,616,209 - 93,646,970 (-)	NCBI
mRatBN7.2	1	84,488,728 - 84,519,494 (-)	NCBI

RefSeq Acc Id:

XM_063283477 ⟹ XP_063139547

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,616,209 - 93,646,970 (-)	NCBI

RefSeq Acc Id:

XM_063283507 ⟹ XP_063139577

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,619,215 - 93,646,970 (-)	NCBI

RefSeq Acc Id:

XM_063283525 ⟹ XP_063139595

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,629,306 - 93,646,970 (-)	NCBI

RefSeq Acc Id:

XR_005501787

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,618,888 - 93,646,970 (-)	NCBI
mRatBN7.2	1	84,488,975 - 84,519,494 (-)	NCBI

RefSeq Acc Id:

XR_010064605

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,618,888 - 93,646,970 (-)	NCBI

RefSeq Acc Id:

XR_010064606

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	93,618,888 - 93,646,969 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001163811	(Get FASTA)	NCBI Sequence Viewer
	XP_006228784	(Get FASTA)	NCBI Sequence Viewer
	XP_008757346	(Get FASTA)	NCBI Sequence Viewer
	XP_008757348	(Get FASTA)	NCBI Sequence Viewer
	XP_038960246	(Get FASTA)	NCBI Sequence Viewer
	XP_038960261	(Get FASTA)	NCBI Sequence Viewer
	XP_038960265	(Get FASTA)	NCBI Sequence Viewer
	XP_038960267	(Get FASTA)	NCBI Sequence Viewer
	XP_038960278	(Get FASTA)	NCBI Sequence Viewer
	XP_038960287	(Get FASTA)	NCBI Sequence Viewer
	XP_038960293	(Get FASTA)	NCBI Sequence Viewer
	XP_038960300	(Get FASTA)	NCBI Sequence Viewer
	XP_038960303	(Get FASTA)	NCBI Sequence Viewer
	XP_038960307	(Get FASTA)	NCBI Sequence Viewer
	XP_038960314	(Get FASTA)	NCBI Sequence Viewer
	XP_038960316	(Get FASTA)	NCBI Sequence Viewer
	XP_063139547	(Get FASTA)	NCBI Sequence Viewer
	XP_063139577	(Get FASTA)	NCBI Sequence Viewer
	XP_063139595	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI67101	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000064640.2
	ENSRNOP00000073534
	ENSRNOP00000073534.2

RefSeq Acc Id:	NP_001163811 ⟸ NM_001170340
- Peptide Label:	precursor
- UniProtKB:	A0A8I6AH60 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVFWPAMSPVSPVWPRKPNLCAFWVLRLVLLLSLKSRTEGTLQNCHWLVVLNKFENVGFHLSKD RFLEHQPVDTVSEVFSKLVDSPVDPQEKYLSFPYYLQINFTCPGEDSEVLARKGHLLGMKPMIQ IDYIHSVNFYRWKPENLQILLEAAPMLSRGDCHAEAMCILNWYTPMPLKNGSVVASVEVYTNGI GPFIPRKRFFVNMNGFLRKDASGAPVFTVGYESLSLKPSHFRLSKSRPLWYTMDHTPVFILGGF DNEKAILLSDSNFHDFVLLELSIDSCWVGSYYCPILGFSATIHDAIATESTLFIRQNQLVYYFT GTYTTLFDKSRGSRGWVRVLSSECIKKLCPVFVGGNGSEYILALTTGKNEGYIHIGTITDGLVS FQMVPDGWSICEKLPGLNCTIEWAVYIADERNLLLLVKTDSVQFYLVNFNLELKTLHILYKIPE FIPEAQNLDFLVLLGTETYTDTPMIPQGLYFNTLNNVLYIWGNFILQSYNREHFIFLADFPKES TIKYMLNSYKGHITFVTEDEEIWYFLEGGYDVYRIVPSQGWNTYFNLQKLEKSPLYSNDETLVS LFYEKNHLYELVYLFDNGKERLVRRFLPVGKLMEYDLPKPFKIGSQRENKIISFEYICPFKEIH LLDVPQKQHVERKESYLALPPLVSESSGFHNNYTLAVYQGLVYYLLWLHAKYNKPYADPVHDPT WRWWQHKIVYKDYYFYLFSNRLTAEGMYINMNAYQKLYNLSSDYSMADFVFLDKGNWFSITAAL LSHQDTFTSADSPGAGLEVDRKLAVSVILADPECLSSSVTQEIHLNRNLLLFKIKITDKRKCSE QGITGRNLKKTSMLIKVLGASGKCFQATTLDTIIRGFLMTKIFIGCPPGKRLAFDVSYTVMHSQ KINKHYLDCVVKDPEMPCFLFRDLFQPFFLVQDLVTGDSGSFLGSYVLKVVGGGRTEETIKDYT EEEIFRYNSPLDTTKSLIWKTKAERTTSDNKFYIMSHKSPGIEWLCSENSPCYDIIPTDIFPPE FFFKLLVSNRGVDDSTYCDYQLTFIVHIHGLPLSSKRSSFTFVVSSTIFLGLVVLYILFCLLWP HISRAWASLRWRINNIMASESYFTYATSTAGFSLQSHSSEESFKGPPRVDSKEGNVQAKKA hide sequence

RefSeq Acc Id:	XP_006228784 ⟸ XM_006228722
- Peptide Label:	isoform X6
- UniProtKB:	A0A0G2K5S0 (UniProtKB/TrEMBL), A0A8I6AH60 (UniProtKB/TrEMBL)
- Sequence:	show sequence METRAPHRRASRKVEVQAAILGAGQRGRTGAAKQRLTGFNQVTGSSYMVFWPAMSPVSPVWPRK PNLCAFWVLRLVLLLSLKSRTEGTLQNCHWLVVLNKFENVGFHLSKDRFLEHQPVDTVSEVFSK LVDSPVDPQEKYLSFPYYLQINFTCPGEDSEVLARKGHLLGMKPMIQIDYIHSVNFYRWKPENL QILLEAAPMLSRAGDCHAEAMCILNWYTPMPLKNGSVVASVEVYTNGIGPFIPRKRFFVNMNGF LRKDASGAPVFTVGYESLSLKPSHFRLSKSRPLWYTMDHTPVFILGGFDNEKAILLSDSNFHDF VLLELSIDSCWVGSYYCPILGFSATIHDAIATESTLFIRQNQLVYYFTGTYTTLFDKSRGSRGW VRVLSSECIKKLCPVFVGGNGSEYILALTTGKNEGYIHIGTITDGLVSFQMVPDGWSICEKLPG LNCTIEWAVYIADERNLLLLVKTDSVQFYLVNFNLELKTLHILYKIPEFIPEAQNLDFLVLLGT ETYTDTPMIPQGLYFNTLNNVLYIWGNFILQSYNREHFIFLADFPKESTIKYMLNSYKGHITFV TEDEEIWYFLEGGYDVYRIVPSQGWNTYFNLQKLEKSPLYSNDETLVSLFYEKNHLYELVYLFD NGKERLVRRFLPVGKLMEYDLPKPFKIGSQRENKIISFEYICPFKEIHLLDVPQKQHVERKESY LALPPLVSESSGFHNNYTLAVYQGLVYYLLWLHAKYNKPYADPVHDPTWRWWQHKIVYKDYYFY LFSNRLTAEGMYINMNAYQKLYNLSSDYSMADFVFLDKGNWFSITAALLSHQDTFTSADSPGAG LEVDRKLAVSVILADPECLSSSVTQEIHLNRNLLLFKIKITDKRKCSEQGITGRNLKKTSMLIK VLGASGKCFQATTLDTIIRGFLMTKIFIGCPPGKRLAFDVSYTVMHSQKINKHYLDCVVKDPEM PCFLFRDLFQPFFLVQDLVTGDSGSFLGSYVLKVVGGGRTEETIKDYTEEEIFRYNSPLDTTKS LIWKTKAERTTSDNKFYIMSHKSPGIEWLCSENSPCYDIIPTDIFPPEFFFKLLVSNRGVDDST YCDYQLTFIVHIHGLPLSSKRSSFTFVVSSTIFLGLVVLYILFCLLWPHISRAWASLRWRINNI MASESYFTYATSTAGFSLQSHSSEESFKGPPRVDSKEGNVQAKKA hide sequence

RefSeq Acc Id:	XP_008757348 ⟸ XM_008759126
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I6AH60 (UniProtKB/TrEMBL)
- Sequence:	show sequence METRAPHRRASRKVEVQAAILGAGQRGRTGAAKQRLTGFNQVTGSSYMVFWPAMSPVSPVWPRK PNLCAFWVLRLVLLLSLKSRTEGTLQNCHWLVVLNKFENVGFHLSKDRFLEHQPVDTVSEVFSK LVDSPVDPQEKYLSFPYYLQINFTCPGEVRVYSVSGLISDSEVLARKGHLLGMKPMIQIDYIHS VNFYRWKPENLQILLEAAPMLSRAGDCHAEAMCILNWYTPMPLKNGSVVASVEVYTNGIGPFIP RKRFFVNMNGFLRKDASGAPVFTVGYESLSLKPSHFRLSKSRPLWYTMDHTPVFILGGFDNEKA ILLSDSNFHDFVLLELSIDSCWVGSYYCPILGFSATIHDAIATESTLFIRQNQLVYYFTGTYTT LFDKSRGSRGWVRVLSSECIKKLCPVFVGGNGSEYILALTTGKNEGYIHIGTITDGLVSFQMVP DGWSICEKLPELKTLHILYKIPEFIPEAQNLDFLVLLGTETYTDTPMIPQGLYFNTLNNVLYIW GNFILQSYNREHFIFLADFPKESTIKYMLNSYKGHITFVTEDEEIWYFLEGGYDVYRIVPSQGW NTYFNLQKLEKSPLYSNDETLVSLFYEKNHLYELVYLFDNGKERLVRRFLPVGKLMEYDLPKPF KIGSQRENKIISFEYICPFKEIHLLDVPQKQHVERKESYLALPPLVSESSGFHNNYTLAVYQGL VYYLLWLHAKYNKPYADPVHDPTWRWWQHKIVYKDYYFYLFSNRLTAEGMYINMNAYQKLYNLS SDYSMADFVFLDKGNWFSITAALLSHQDTFTSADSPGAGLEVDRKLAVSVILADPECLSSSVTQ EIHLNRNLLLFKIKITDKRKCSEQGITGRNLKKTSMLIKVLGASGKCFQATTLDTIIRGFLMTK IFIGCPPGKRLAFDVSYTVMHSQKINKHYLDCVVKDPEMPCFLFRDLFQPFFLVQDLVTGDSGS FLGSYVLKVVGGGRTEETIKDYTEEEIFRYNSPLDTTKSLIWKTKAERTTSDNKFYIMSHKSPG IEWLCSENSPCYDIIPTDIFPPEFFFKLLVSNRGVDDSTYCDYQLTFIVHIHGLPLSSKRSSFT FVVSSTIFLGLVVLYILFCLLWPHISRAWASLRWRINNIMASESYFTYATSTAGFSLQSHSSEE SFKGPPRVDSKEGNVQAKKA hide sequence

RefSeq Acc Id:	XP_008757346 ⟸ XM_008759124
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AH60 (UniProtKB/TrEMBL)
- Sequence:	show sequence METRAPHRRASRKVEVQAAILGAGQRGRTGAAKQRLTGFNQVTGSSYMVFWPAMSPVSPVWPRK PNLCAFWVLRLVLLLSLKSRTEGTLQNCHWLVVLNKFENVGFHLSKDRFLEHQPVDTVSEVFSK LVDSPVDPQEKYLSFPYYLQINFTCPGEVRVYSVSGLISDSEVLARKGHLLGMKPMIQIDYIHS VNFYRWKPENLQILLEAAPMLSRAGDCHAEAMCILNWYTPMPLKNGSVVASVEVYTNGIGPFIP RKRFFVNMNGFLRKDASGAPVFTVGYESLSLKPSHFRLSKSRPLWYTMDHTPVFILGGFDNEKA ILLSDSNFHDFVLLELSIDSCWVGSYYCPILGFSATIHDAIATESTLFIRQNQLVYYFTGTYTT LFDKSRGSRGWVRVLSSECIKKLCPVFVGGNGSEYILALTTGKNEGYIHIGTITDGLVSFQMVP DGWSICEKLPGLNCTIEWAVYIADERNLLLLVKTDSVQFYLVNFNLELKTLHILYKIPEFIPEA QNLDFLVLLGTETYTDTPMIPQGLYFNTLNNVLYIWGNFILQSYNREHFIFLADFPKESTIKYM LNSYKGHITFVTEDEEIWYFLEGGYDVYRIVPSQGWNTYFNLQKLEKSPLYSNDETLVSLFYEK NHLYELVYLFDNGKERLVRRFLPVGKLMEYDLPKPFKIGSQRENKIISFEYICPFKEIHLLDVP QKQHVERKESYLALPPLVSESSGFHNNYTLAVYQGLVYYLLWLHAKYNKPYADPVHDPTWRWWQ HKIVYKDYYFYLFSNRLTAEGMYINMNAYQKLYNLSSDYSMADFVFLDKGNWFSITAALLSHQD TFTSADSPGAGLEVDRKLAVSVILADPECLSSSVTQEIHLNRNLLLFKIKITDKRKCSEQGITG RNLKKTSMLIKVLGASGKCFQATTLDTIIRGFLMTKIFIGCPPGKRLAFDVSYTVMHSQKINKH YLDCVVKDPEMPCFLFRDLFQPFFLVQDLVTGDSGSFLGSYVLKVVGGGRTEETIKDYTEEEIF RYNSPLDTTKSLIWKTKAERTTSDNKFYIMSHKSPGIEWLCSENSPCYDIIPTDIFPPEFFFKL LVSNRGVDDSTYCDYQLTFIVHIHGLPLSSKRSSFTFVVSSTIFLGLVVLYILFCLLWPHISRA WASLRWRINNIMASESYFTYATSTAGFSLQSHSSEESFKGPPRVDSKEGNVQAKKA hide sequence

Ensembl Acc Id:

ENSRNOP00000073534 ⟸ ENSRNOT00000087411

RefSeq Acc Id:	XP_038960316 ⟸ XM_039104388
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I6AH60 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960246 ⟸ XM_039104318
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AH60 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960267 ⟸ XM_039104339
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6AH60 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960265 ⟸ XM_039104337
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6AH60 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960261 ⟸ XM_039104333
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AH60 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960278 ⟸ XM_039104350
- Peptide Label:	isoform X10
- UniProtKB:	A0A8I6AH60 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960287 ⟸ XM_039104359
- Peptide Label:	isoform X10
- UniProtKB:	A0A8I6AH60 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960293 ⟸ XM_039104365
- Peptide Label:	isoform X10
- UniProtKB:	A0A8I6AH60 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960300 ⟸ XM_039104372
- Peptide Label:	isoform X12

RefSeq Acc Id:	XP_038960307 ⟸ XM_039104379
- Peptide Label:	isoform X14

RefSeq Acc Id:	XP_038960303 ⟸ XM_039104375
- Peptide Label:	isoform X13

RefSeq Acc Id:	XP_038960314 ⟸ XM_039104386
- Peptide Label:	isoform X15

Ensembl Acc Id:

ENSRNOP00000064640 ⟸ ENSRNOT00000072441

Ensembl Acc Id:

ENSRNOP00000094167 ⟸ ENSRNOT00000099807

RefSeq Acc Id:	XP_063139547 ⟸ XM_063283477
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6AH60 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139577 ⟸ XM_063283507
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_063139595 ⟸ XM_063283525
- Peptide Label:	isoform X16

Ensembl Acc Id:

ENSRNOP00000027973 ⟸ ENSRNOT00000027974

Protein Domains

CATSPERG beta-propeller

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K5S0-F1-model_v2	AlphaFold	A0A0G2K5S0	1-1197	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310942	AgrOrtholog
BioCyc Gene	G2FUF-60188	BioCyc
Ensembl Genes	ENSRNOG00000060693	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000072441.3	UniProtKB/TrEMBL
	ENSRNOT00000087411	ENTREZGENE
	ENSRNOT00000087411.3	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7457683	IMAGE-MGC_LOAD
InterPro	CATSPERG	UniProtKB/TrEMBL
	CATSPERG_b-prop	UniProtKB/TrEMBL
	CATSPERG_C	UniProtKB/TrEMBL
	CATSPERG_Ig-like	UniProtKB/TrEMBL
	CATSPERG_N	UniProtKB/TrEMBL
MGC_CLONE	MGC:189552	IMAGE-MGC_LOAD
NCBI Gene	292767	ENTREZGENE
PANTHER	CATION CHANNEL SPERM-ASSOCIATED PROTEIN SUBUNIT GAMMA	UniProtKB/TrEMBL
	PTHR14327	UniProtKB/TrEMBL
Pfam	CATSPERG	UniProtKB/TrEMBL
	CATSPERG_C	UniProtKB/TrEMBL
	CATSPERG_Ig-like	UniProtKB/TrEMBL
	CATSPERG_NTD	UniProtKB/TrEMBL
PhenoGen	Catsperg	PhenoGen
RatGTEx	ENSRNOG00000060693	RatGTEx
UniProt	A0A0G2K5S0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AH60	ENTREZGENE
	M0R5H3_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2025-11-13	Catsperg	catsper channel auxiliary subunit gamma	Catsperg	cation channel sperm associated auxiliary subunit gamma	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2021-03-09	Catsperg	cation channel sperm associated auxiliary subunit gamma	LOC102550585	cation channel sperm-associated protein subunit gamma 1-like	Data merged from RGD:7706385	737654	PROVISIONAL
2016-10-04	Catsperg	cation channel sperm associated auxiliary subunit gamma	Catsperg1	catsper channel auxiliary subunit gamma 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2015-09-18	Catsperg1	catsper channel auxiliary subunit gamma 1	Catsperg1	cation channel, sperm-associated, gamma 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2013-12-18	LOC102550585	cation channel sperm-associated protein subunit gamma 1-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2010-04-23	Catsperg1	cation channel, sperm-associated, gamma 1	RGD1310942	similar to R27328_1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1310942	similar to R27328_1	RGD1310942_predicted	similar to R27328_1 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-20	RGD1310942_predicted	similar to R27328_1 (predicted)	LOC292767_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC292767_predicted	similar to R27328_1 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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