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Gene: Tstd2 (thiosulfate sulfurtransferase like domain containing 2) Rattus norvegicus

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Symbol:

Tstd2

Name:

thiosulfate sulfurtransferase like domain containing 2

RGD ID:

1310893

Description:

Orthologous to human TSTD2 (thiosulfate sulfurtransferase like domain containing 2); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; cadmium dichloride.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC362514; RGD1310893; similar to hypothetical protein 3010020C06; thiosulfate sulfurtransferase (rhodanese)-like domain containing 2; thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	65,167,362 - 65,211,525 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	65,181,000 - 65,211,525 (-)	Ensembl				GRCr8
mRatBN7.2	5	60,371,751 - 60,415,916 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	60,393,454 - 60,415,916 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	62,365,858 - 62,388,304 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	64,185,361 - 64,207,807 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	64,154,617 - 64,177,060 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	61,693,203 - 61,734,011 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	61,704,222 - 61,734,011 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	66,201,839 - 66,250,472 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	62,668,257 - 62,690,961 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	58,954,219 - 58,976,640 (-)	NCBI		Celera
RGSC_v3.1	5	62,676,821 - 62,691,140 (-)	NCBI
Cytogenetic Map	5	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acrolein (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

antirheumatic drug (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

cadmium dichloride (EXP)

clotrimazole (EXP)

cyclosporin A (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

doxorubicin (ISO)

indometacin (ISO)

methidathion (ISO)

ozone (ISO)

paracetamol (ISO)

pentachlorophenol (ISO)

perfluorononanoic acid (ISO)

perfluorooctanoic acid (ISO)

pirinixic acid (ISO)

resveratrol (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

sunitinib (ISO)

tebuconazole (ISO)

tetrachloroethene (ISO)

tetrachloromethane (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

trovafloxacin (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
3.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:12477932

Genomics

Comparative Map Data

Tstd2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	65,167,362 - 65,211,525 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	65,181,000 - 65,211,525 (-)	Ensembl				GRCr8
mRatBN7.2	5	60,371,751 - 60,415,916 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	60,393,454 - 60,415,916 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	62,365,858 - 62,388,304 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	64,185,361 - 64,207,807 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	64,154,617 - 64,177,060 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	61,693,203 - 61,734,011 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	61,704,222 - 61,734,011 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	66,201,839 - 66,250,472 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	62,668,257 - 62,690,961 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	58,954,219 - 58,976,640 (-)	NCBI		Celera
RGSC_v3.1	5	62,676,821 - 62,691,140 (-)	NCBI
Cytogenetic Map	5	q22	NCBI

TSTD2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	97,600,080 - 97,633,368 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	97,600,080 - 97,633,377 (-)	Ensembl			hg38	GRCh38
GRCh37	9	100,362,362 - 100,395,650 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	99,402,183 - 99,435,783 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	9	97,441,923 - 97,475,154	NCBI
Celera	9	70,876,618 - 70,910,219 (-)	NCBI		Celera
Cytogenetic Map	9	q22.33	NCBI
HuRef	9	69,963,539 - 69,996,971 (-)	NCBI		HuRef
CHM1_1	9	100,508,794 - 100,542,395 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	109,772,021 - 109,805,309 (-)	NCBI		T2T-CHM13v2.0

Tstd2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	46,114,746 - 46,138,725 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	46,114,746 - 46,138,694 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	46,114,746 - 46,138,725 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	46,114,746 - 46,138,694 (-)	Ensembl			mm10	GRCm38
MGSCv37	4	46,127,618 - 46,151,347 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	46,135,846 - 46,159,510 (-)	NCBI		MGSCv36	mm8
Celera	4	46,136,992 - 46,160,615 (-)	NCBI		Celera
Cytogenetic Map	4	B1	NCBI
cM Map	4	24.49	NCBI

Tstd2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	27,823,503 - 27,842,986 (+)	Ensembl
ChiLan1.0	NW_004955419	27,820,265 - 27,841,210 (+)	NCBI	ChiLan1.0	ChiLan1.0

TSTD2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	41,823,931 - 41,857,256 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	41,826,337 - 41,857,510 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	68,690,830 - 68,724,140 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	96,812,273 - 96,845,682 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	96,812,273 - 96,845,682 (-)	Ensembl			panPan2	panpan1.1

TSTD2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	54,914,459 - 54,938,156 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	54,914,991 - 54,937,831 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	53,347,288 - 53,372,357 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	56,025,656 - 56,050,735 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	56,025,659 - 56,050,414 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	54,522,028 - 54,547,099 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	54,553,524 - 54,576,971 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	55,248,568 - 55,273,636 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Tstd2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	169,840,921 - 169,881,966 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936524	6,405,006 - 6,426,176 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936524	6,394,482 - 6,429,515 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TSTD2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	239,466,588 - 239,492,697 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	239,466,591 - 239,492,883 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	267,522,297 - 267,548,379 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TSTD2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	41,775,926 - 41,809,761 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	41,775,621 - 41,811,554 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666038	38,829,219 - 38,862,764 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tstd2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624825	3,210,249 - 3,229,981 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624825	3,206,588 - 3,230,327 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Tstd2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	377,289 - 399,911 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Tstd2
453 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	208
Count of miRNA genes:	148
Interacting mature miRNAs:	175
Transcripts:	ENSRNOT00000012915
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1298067	Scl15	Serum cholesterol level QTL 15	4.8	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	38011670	83011670	Rat
1300115	Hrtrt7	Heart rate QTL 7	2.76		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	5	52665372	94894052	Rat
1578776	Stresp18	Stress response QTL 18	2.9		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	5	32751649	77751649	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	44924861	153890773	Rat
6907115	Mcs29	Mammary carcinoma susceptibility QTL 29			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	38004331	83004331	Rat
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	38207390	136631402	Rat
1358353	Srcrtb2	Stress Responsive Cort Basal QTL 2	3.48	0.003	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	23671493	79046465	Rat
61386	Bp49	Blood pressure QTL 49	16.6		cerebrum integrity trait (VT:0010549)	brain infarction volume (CMO:0001013)	5	65089051	103648916	Rat
1331801	Rf33	Renal function QTL 33	4.149		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	48523123	134369373	Rat
1598807	Glom12	Glomerulus QTL 12	2.7		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	38011670	83011670	Rat
1302786	Kidm8	Kidney mass QTL 8	28.15		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	5	38011670	83011670	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	65089051	166764498	Rat
1331782	Rf36	Renal function QTL 36	3.296		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	39019942	102105896	Rat
6903292	Stl28	Serum triglyceride level QTL 28	2.6	0.0073	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	5	33311673	78311673	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	51657967	166600247	Rat
1578767	Stresp17	Stress response QTL 17	4.3	0.01	blood aldosterone amount (VT:0005346)	plasma aldosterone level (CMO:0000551)	5	32751649	77751649	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55124766	172190305	Rat
1641912	Alcrsp18	Alcohol response QTL 18			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	39985948	84985948	Rat
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	6922282	81330203	Rat
6903306	Scl35	Serum cholesterol QTL 35	2.6	0.0073	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	33311673	78311673	Rat
1576317	Eutr2	Estrogen induced uterine response QTL 2		0.01	uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	39526924	84526924	Rat
1331773	Scl26	Serum cholesterol level QTL 26	3.065		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	48523123	91770353	Rat
70189	Mcs5	Mammary carcinoma susceptibility QTL 5	10.51		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	60601597	137492949	Rat
1331771	Rf35	Renal function QTL 35	4.36965		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	91770353	Rat
61359	Eaex	Experimental allergic encephalomyelitis QTL x	3		nervous system integrity trait (VT:0010566)	post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)	5	60511627	105511627	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	36460764	136631402	Rat
61426	Scl2	Serum cholesterol level QTL 2	7.3	0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	64589016	109589016	Rat
8662454	Vetf3	Vascular elastic tissue fragility QTL 3	27.4		artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	5	7065535	74335773	Rat
1331756	Rf34	Renal function QTL 34	4.16275		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	87027358	Rat
8552954	Pigfal14	Plasma insulin-like growth factor 1 level QTL 14	9		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	26023211	71023211	Rat
2316954	Rf57	Renal function QTL 57	0		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	64589016	93503770	Rat
2316959	Gluco59	Glucose level QTL 59	4.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	56546393	101546393	Rat
1600358	Mamtr5	Mammary tumor resistance QTL 5			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	23671493	68671493	Rat
2316957	Pur21	Proteinuria QTL 21	6.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	5	64589016	91762830	Rat

Markers in Region

RH129174

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	60,393,009 - 60,393,229 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	61,711,105 - 61,711,324	NCBI	Rnor6.0
Rnor_5.0	5	66,227,553 - 66,227,772	UniSTS	Rnor5.0
RGSC_v3.4	5	62,667,813 - 62,668,032	UniSTS	RGSC3.4
Celera	5	58,953,775 - 58,953,994	UniSTS
Cytogenetic Map	5	q22	UniSTS

RH144453

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	60,397,078 - 60,397,205 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	61,715,174 - 61,715,300	NCBI	Rnor6.0
Rnor_5.0	5	66,231,622 - 66,231,748	UniSTS	Rnor5.0
RGSC_v3.4	5	62,671,882 - 62,672,008	UniSTS	RGSC3.4
Celera	5	58,957,844 - 58,957,970	UniSTS
RH 3.4 Map	5	393.7	UniSTS
Cytogenetic Map	5	q22	UniSTS

MARC_9753-9754:996688568:1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	60,397,418 - 60,398,095 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	61,715,514 - 61,716,190	NCBI	Rnor6.0
Rnor_5.0	5	66,231,962 - 66,232,638	UniSTS	Rnor5.0
RGSC_v3.4	5	62,672,222 - 62,672,898	UniSTS	RGSC3.4
Celera	5	58,958,184 - 58,958,860	UniSTS
Cytogenetic Map	5	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	92	59	6	356	192	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108663	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436963	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436964	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436966	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436967	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436969	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238084	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238085	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238086	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238090	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238092	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763698	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287909	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287910	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287911	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287912	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287913	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287914	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287915	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287916	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010066410	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010066411	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010066412	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC126894	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC158668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000012915 ⟹ ENSRNOP00000012915

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	65,189,060 - 65,211,525 (-)	Ensembl
mRatBN7.2 Ensembl	5	60,393,454 - 60,415,916 (-)	Ensembl
Rnor_6.0 Ensembl	5	61,711,549 - 61,734,011 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000090566 ⟹ ENSRNOP00000075637

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	5	61,704,222 - 61,733,778 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000152823 ⟹ ENSRNOP00000110236

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	65,181,000 - 65,211,525 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000157050 ⟹ ENSRNOP00000107704

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	65,181,732 - 65,211,525 (-)	Ensembl

RefSeq Acc Id:

NM_001108663 ⟹ NP_001102133

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,189,060 - 65,211,525 (-)	NCBI
mRatBN7.2	5	60,393,454 - 60,415,916 (-)	NCBI
Rnor_6.0	5	61,711,549 - 61,734,011 (-)	NCBI
Rnor_5.0	5	66,201,839 - 66,250,472 (-)	NCBI
RGSC_v3.4	5	62,668,257 - 62,690,961 (-)	RGD
Celera	5	58,954,219 - 58,976,640 (-)	RGD

Sequence:

show sequence

TCGCGGTGGAAGGCCGGCGTCTGCAAGTCCAAGCTCAGCCGCCTCCTCCGGCTTTCCACTCTGG
GACCTTCCGGACGGCGAGCTAAATTATCCGGGCTGCAACGATCCCGCCTCAGCTTTGCACAGGC
CCAGCAGTATTTTCCCGGCGGCCCCTGCGCCGACGACTTTGGAGACTTCCGGAGATAGATACTT
GACTGAAAGGGATCCATCCCACTGATAAAACCAGATGCCTTCTCCCACTTCAGCAGACGAAGAG
GATGGCCTGGAGACCTGTGTTTTAAAGACTTTTGATCTGGATTTAAAAGAATCAAATATTGTTA
CTCCAAGCAATAGTCTCAAAGCAGAGTTAGATGGCAGTACAAAGAAGAAATACTCGTTTGCAAA
GAAAAAGGCCTTTGCCCTTTTTGTCAAAACCAAACAAGTTCCAGTGCCTTCTTATGAAGTTAAG
GAAAGACGGTGGCGATGTTGTCAGCAGCTGTTTGCAGAGCAGACCAGCATCCACAGACATGTGG
CCACACAGCACGCTGAAGACGTGTACCAGCAGACTGCTTCCATTCTCAAGCAGCTCACTGCAGC
ACTGAGGACCCCACAGAGTCTTACGCCCACAGACCGGAGGAGCTCCCCAAAAGACTGTCTCCCT
CCTAGTCAGGATGTGTCTGCTTGGCTCCCTGATGTGAGCCACGTTAGCCCGCAAGAGCTGAGGA
GTGGCCAGGGCAATGAGGAAGGAGAGGTGCTCCTGTATTACTGCTACTGTGACTTGGAGGACCC
CGACTGGGTCTGTGCCTGGCAGGCAGCTCTGTGCCGTCACCTGCACCTTACAGGCAAGATTCGG
ATCGCGACAGAAGGAATCAATGGAACCGTTGGAGGAAGCAAAGTGGCCACCCGACTCTACATGG
AAGTCATGCTTTCTTGCCCATTATTTAAGGATTACCTGAGCGAGGATGATTTTAAGAGCAGCAA
AGGAGGGTCTCACTGCTTCCCGGAATTGCGAGTCGGTGTGTTCGAAGAGATCGTGCCCATGGGG
ATCAGCCCCAGTGAGGTCTCCTACAAGAACCCCGGAATCCATTTATCCCCTGGAGAATTTCATA
AAGAAATAGAAAAACTATTGTCACAGGCAAATCAGGAACAAGGTGATACTCTCCTACTGGACTG
CAGGAACTTCTATGAAAGCAAAATAGGACGATTCCAGGGCTGCTTAGCACCAGACATCAGGAAG
TTCAGTTACTTCCCTAGCTACGTTGACAAAAACCTTGACATTTTCAGGCAGAAGAGGGTGCTGA
TGTACTGCACTGGGGGCATTCGCTGCGAACGGGGTTCTGCATACCTCAGAGCCAAGGGAGTGTG
TAAGGAAGTGTTTCAGCTCAAGGGTGGCATCCACAAGTATCTAGAAGAGTTTCCTGATGGATTT
TTCAAAGGGAAGCTGTTTGTTTTTGATGAGCGGTTTGCCCTGGCCTACAACAGTGCTGTGGTCT
CAGAATGTTCATATTGTGGAGCCCCGTGGGACCAATATAAACTCTGTTCTACTCCTCAATGCCG
CCAGCTTGTGTTGACCTGTTCTGCCTGTCAAGGACAAGGATTCACAGCCTGTTGTGTCATGTGT
CAAGACAAAGGGGGCAAGCAGGCTTCAGACCCCACCCAGGACAGTTTTAAAGAAGAGTGTGAGT
GCACAGCCCGGAGGCCACGCATTCCGCAGGAGCAGCGTGCGTGACCCCCTGAGCCTGGGCCCGG
AGCCTGCGGCTGCTGAGGCTGAACTGCTCGTTCAGCAGTCACTGGCTTCACGACGTAGAGTTAC
ATAGCCATGTGCAGATGGTGAAGGTTGTAGAAACAAATGGAGAGTGTCCATGCTGGTCACTACC
ACCCTAGCAGATAGATGGCCACAGCAAAGGACCAGGAAGTCCAGCGTAGGCTACCTAATTTACC
TGCTTTGATTGAGAAGATGCTAGAGCCTGGGAAAAGGTAAACCATGTGGGATCCCAGTGTTGAT
GAGAGATTGTCTTGAGCTTGGTGGCTCCTCGGCCGTGCAGCAGGGAGGCCCCGGCGCCACTCTA
GTCCCCTGTACTGTCCATAGCCTTACAGTTTGGTGTCAGCAAACCTTCACCCTGGCAGCAAAAG
TATAAAAGTTGGGCCCTGGGTATGGACTCTTAAACCAGACCAGCTTCTATCTCCCCCTGCCTCA
TTCTCTTCCCTGACTGCCCGAAGGCTCTGTGGCTTTGACCACCTCGTGCCTTGGAGCATTAATG
AATCTGCCAACCCATCCCTTTATATGTGATCATGGCACTACTGAGTAGGGCCAGAGACCACGTG
GCCTTCAGAATCTAAAGCAATTACACTTTGTTCCTTCACGGAGGTCTTTGGAAAGAGGTGGCCC
ATGCTTCTATTGATTAGGTTTCTTTAAAGATGGTCTTCTAACAGCTCTGCATTCCCCAGCAGTC
CCTCTCTCTGCTTGTAAGCATCCTCAGGGATCCAGATGAGCAGCAGGCTTACGTCACATGTGGC
ACACAGGACATTCATTAGTGAGCTCATACAGCACGGTAGCGACCTAACCTCCTGGCCTTTGGGC
ACATGTTCCTGTCTCACAATTCTTAAGAAGCACACAGGCCATACATACACCAAATGGCTTTAAT
ATTATTTTGCAGTTTCCAGTGATGCAGAATGCAGCTGCAGTTGTGTTTCAAGGAGAAGCTGAGT
GGAGCTGGCTGTCCCTGCAGCTTGGTGCCACTCCTGGGCCTCAGTGACCACTCACAGTGCTGAG
GCCCCGATGCCACTCTAGTTACCCTGTGCTGTCCATGGCCTTACAGTCCGGTGTGCAGGTCTTA
GGTCAGAAGCCCCTGGCTGTGCTCTGCAGCTTTTGAGCCATCACTGTCATATCGGCTGAATCCC
TAAGGAAAACACTCCCCAAAGCAACAAAAGTACTAGTTTAACTGGCACTGTGGTCTATTAAAAG
GCACAAGAACAGTGTATTTTAACATTTTTACTGGCTCCCATGGTGTTAAAGGGATCCAGTAGGA
ATGCCAAGATTAGGTTTCAGAATAATTCCTTGTGTTGTATGTCCAGGATCTCCTAATTCCTTAC
CATTGGGATGTTGTACTCTGCTGTCCTTCAGAG

hide sequence

RefSeq Acc Id:

XM_006238084 ⟹ XP_006238146

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,175,330 - 65,211,322 (-)	NCBI
mRatBN7.2	5	60,385,368 - 60,415,712 (-)	NCBI
Rnor_6.0	5	61,703,474 - 61,733,817 (-)	NCBI
Rnor_5.0	5	66,201,839 - 66,250,472 (-)	NCBI

Sequence:

show sequence

TCAGGGACTTTCTACGCACGCGCGAGCCGGGGGGGGGGCGTGGGCTCCAGGGCGGGGAGCAGCG
CCAAGTTGGAGAAGGGAGACCCAGGAAAGGCCTAGGTATTGCGGATACTTGACTGAAAGGGATC
CATCCCACTGATAAAACCAGATGCCTTCTCCCACTTCAGCAGACGAAGAGGATGGCCTGGAGAC
CTGTGTTTTAAAGACTTTTGATCTGGATTTAAAAGAATCAAATATTGTTACTCCAAGCAATAGT
CTCAAAGCAGAGTTAGATGGCAGTACAAAGAAGAAATACTCGTTTGCAAAGAAAAAGGCCTTTG
CCCTTTTTGTCAAAACCAAACAAGTTCCAGTGCCTTCTTATGAAGTTAAGGAAAGACGGTGGCG
ATGTTGTCAGCAGCTGTTTGCAGAGCAGACCAGCATCCACAGACATGTGGCCACACAGCACGCT
GAAGACGTGTACCAGCAGACTGCTTCCATTCTCAAGCAGCTCACTGCAGCACTGAGGACCCCAC
AGAGTCTTACGCCCACAGACCGGAGGAGCTCCCCAAAAGACTGTCTCCCTCCTAGTCAGGATGT
GTCTGCTTGGCTCCCTGATGTGAGCCACGTTAGCCCGCAAGAGCTGAGGAGTGGCCAGGGCAAT
GAGGAAGGAGAGGTGCTCCTGTATTACTGCTACTGTGACTTGGAGGACCCCGACTGGGTCTGTG
CCTGGCAGGCAGCTCTGTGCCGTCACCTGCACCTTACAGGCAAGATTCGGATCGCGACAGAAGG
AATCAATGGAACCGTTGGAGGAAGCAAAGTGGCCACCCGACTCTACATGGAAGTCATGCTTTCT
TGCCCATTATTTAAGGATTACCTGAGCGAGGATGATTTTAAGAGCAGCAAAGGAGGGTCTCACT
GCTTCCCGGAATTGCGAGTCGGTGTGTTCGAAGAGATCGTGCCCATGGGGATCAGCCCCAGTGA
GGTCTCCTACAAGAACCCCGGAATCCATTTATCCCCTGGAGAATTTCATAAAGAAATAGAAAAA
CTATTGTCACAGGCAAATCAGGAACAAGGTGATACTCTCCTACTGGACTGCAGGAACTTCTATG
AAAGCAAAATAGGACGATTCCAGGGCTGCTTAGCACCAGACATCAGGAAGTTCAGTTACTTCCC
TAGCTACGTTGACAAAAACCTTGACATTTTCAGGCAGAAGAGGGTGCTGATGTACTGCACTGGG
GGCATTCGCTGCGAACGGGGTTCTGCATACCTCAGAGCCAAGGGAGTGTGTAAGGAAGTGTTTC
AGCTCAAGGGTGGCATCCACAAGTATCTAGAAGAGTTTCCTGATGGATTTTTCAAAGGGAAGCT
GTTTGTTTTTGATGAGCGGTTTGCCCTGGCCTACAACAGTGCTGTGGTCTCAGGCTCTGGAAAA
AGTGGCCTGTGGCGTGAGCAGTGGACAAAGAGCTCTTCAGGTTATGATAAGAGCAGGAGTCTGT
GTCCCCAGCATCCTCAGCACATCCTGAAGTTGAAGAACTTGCCTGGAAGTGTGTGTAAGTCTGC
ATTCCATGGTGAGGTCTGTAAGTGCCCGCCTTTTTCTGGTGCTTTGGGAAATCAGTGTCTCGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACTTGGTTTTCCACGGGCATCTGACAGCCTCTG
ACCATCAGCTGAACCTCCAGGGTTAAGCTCTTTTCATTTTGCAGAAGGTTGGAAGTTATAGAGA
ACCCTTGGTAGAGCCTGTGAGGATTTGATGAAAACAGTGTTTTCTTGGTTGATGACACTCAGGG
TAAATGTCACCATTAGTCAAGTTGACAATATAAACCTGTCTCATGCCTTGCTTTTCCTTCTGAC
TCTCCCACAGATTTGTCAGACCCACTGCCTTCGTTTCACACCATGTCCTGTTCTCCTTAGTAGC
ATCAGGAACACGTGGTAAGTGACTCCACCTGGGACTCGTGAGCAGTTAGCACGTGGGAACAGGT
GGGGGACCCATGTTGCCTTTCATTCTGAGAACTATGCGCGTGCTTGATGAAGAGGACAGACTTT
TTCCCTCTTTGTGGAAAAGGAGTCAAAGGATGCCCTGAACAGACACTGAGGGGATGTGACTTAC
TTTCACGTTTTATTTTTATTATTAGTGTTACATGTGCATGTGGAGGTCAAAGGGCAACTTTATG
GGTTCTAGGGATTGAACTCAGTTCACCAAAGCATATTCAGTGAGCGCATTCACTCACCGAGCCA
TCTTGCTTGCTCTGCATTTACTTTTCTATGAACTACACATTTCTGACTTTCCCTTGGGAGCCAC
ATGGAGTCTCCTGGGCAGTGGCATTTGATGATGGTGTTGGCTTTTGGTGATGGCATTAGCTGAG
AGCTTTGGGAAATCAGTGTGACCTAGAGAAGGGTCTTCTAAAGAGGAGCAGACCCTAGATTAGC
CTGTGCACCCCAACATTTCATTTCCTCTAGCTGACATGCTGAACTCTTGGCCCAGTCAGTGCTG
AGCTGGGCTAGGAAGGAGAGGCCTTTTCTCTTGGTCCTGAAGGCAGGCAGCTCACAGACTTGGG
GGGAGGGGGAGATGTGTTTTAACACAGAACAAGATGTGATACCCATGAAAGTCAGGAGTGTGAC
CCCGTAAACCTCTCCTGGAGTGCGGTGGGTAGATAAGATGGCAGAATACAGGCATGT

hide sequence

RefSeq Acc Id:

XM_006238085 ⟹ XP_006238147

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,175,330 - 65,211,303 (-)	NCBI
mRatBN7.2	5	60,385,368 - 60,415,698 (-)	NCBI
Rnor_6.0	5	61,703,474 - 61,733,802 (-)	NCBI
Rnor_5.0	5	66,201,839 - 66,250,472 (-)	NCBI

Sequence:

show sequence

GCACGCGCGAGCCGGGGGGGGGGCGTGGGCTCCAGGGCGGGGAGCAGCGCCAAGTTGGAGAAGG
GAGACCCAGGAAAGGCCTAGGTATTGCGGGTACGTGTTCTCGCTTTTGCCGTCTGGCTGTAGAC
GTCTCGGGAAAACTGAGCGGGGAAGAAGGGCAAGCCACTCTCAGCGGTAGGGGAGCCAGGCCCG
CCCGGCCGAGCCTGCTTACTGCCGTCCTACTGCTCACCTCTTCCAGCTGACGGGCGCCTCAGCT
ATTGATCGATACTTGACTGAAAGGGATCCATCCCACTGATAAAACCAGATGCCTTCTCCCACTT
CAGCAGACGAAGAGGATGGCCTGGAGACCTGTGTTTTAAAGACTTTTGATCTGGATTTAAAAGA
ATCAAATATTGTTACTCCAAGCAATAGTCTCAAAGCAGAGTTAGATGGCAGTACAAAGAAGAAA
TACTCGTTTGCAAAGAAAAAGGCCTTTGCCCTTTTTGTCAAAACCAAACAAGTTCCAGTGCCTT
CTTATGAAGTTAAGGAAAGACGGTGGCGATGTTGTCAGCAGCTGTTTGCAGAGCAGACCAGCAT
CCACAGACATGTGGCCACACAGCACGCTGAAGACGTGTACCAGCAGACTGCTTCCATTCTCAAG
CAGCTCACTGCAGCACTGAGGACCCCACAGAGTCTTACGCCCACAGACCGGAGGAGCTCCCCAA
AAGACTGTCTCCCTCCTAGTCAGGATGTGTCTGCTTGGCTCCCTGATGTGAGCCACGTTAGCCC
GCAAGAGCTGAGGAGTGGCCAGGGCAATGAGGAAGGAGAGGTGCTCCTGTATTACTGCTACTGT
GACTTGGAGGACCCCGACTGGGTCTGTGCCTGGCAGGCAGCTCTGTGCCGTCACCTGCACCTTA
CAGGCAAGATTCGGATCGCGACAGAAGGAATCAATGGAACCGTTGGAGGAAGCAAAGTGGCCAC
CCGACTCTACATGGAAGTCATGCTTTCTTGCCCATTATTTAAGGATTACCTGAGCGAGGATGAT
TTTAAGAGCAGCAAAGGAGGGTCTCACTGCTTCCCGGAATTGCGAGTCGGTGTGTTCGAAGAGA
TCGTGCCCATGGGGATCAGCCCCAGTGAGGTCTCCTACAAGAACCCCGGAATCCATTTATCCCC
TGGAGAATTTCATAAAGAAATAGAAAAACTATTGTCACAGGCAAATCAGGAACAAGGTGATACT
CTCCTACTGGACTGCAGGAACTTCTATGAAAGCAAAATAGGACGATTCCAGGGCTGCTTAGCAC
CAGACATCAGGAAGTTCAGTTACTTCCCTAGCTACGTTGACAAAAACCTTGACATTTTCAGGCA
GAAGAGGGTGCTGATGTACTGCACTGGGGGCATTCGCTGCGAACGGGGTTCTGCATACCTCAGA
GCCAAGGGAGTGTGTAAGGAAGTGTTTCAGCTCAAGGGTGGCATCCACAAGTATCTAGAAGAGT
TTCCTGATGGATTTTTCAAAGGGAAGCTGTTTGTTTTTGATGAGCGGTTTGCCCTGGCCTACAA
CAGTGCTGTGGTCTCAGGCTCTGGAAAAAGTGGCCTGTGGCGTGAGCAGTGGACAAAGAGCTCT
TCAGGTTATGATAAGAGCAGGAGTCTGTGTCCCCAGCATCCTCAGCACATCCTGAAGTTGAAGA
ACTTGCCTGGAAGTGTGTGTAAGTCTGCATTCCATGGTGAGGTCTGTAAGTGCCCGCCTTTTTC
TGGTGCTTTGGGAAATCAGTGTCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACTTG
GTTTTCCACGGGCATCTGACAGCCTCTGACCATCAGCTGAACCTCCAGGGTTAAGCTCTTTTCA
TTTTGCAGAAGGTTGGAAGTTATAGAGAACCCTTGGTAGAGCCTGTGAGGATTTGATGAAAACA
GTGTTTTCTTGGTTGATGACACTCAGGGTAAATGTCACCATTAGTCAAGTTGACAATATAAACC
TGTCTCATGCCTTGCTTTTCCTTCTGACTCTCCCACAGATTTGTCAGACCCACTGCCTTCGTTT
CACACCATGTCCTGTTCTCCTTAGTAGCATCAGGAACACGTGGTAAGTGACTCCACCTGGGACT
CGTGAGCAGTTAGCACGTGGGAACAGGTGGGGGACCCATGTTGCCTTTCATTCTGAGAACTATG
CGCGTGCTTGATGAAGAGGACAGACTTTTTCCCTCTTTGTGGAAAAGGAGTCAAAGGATGCCCT
GAACAGACACTGAGGGGATGTGACTTACTTTCACGTTTTATTTTTATTATTAGTGTTACATGTG
CATGTGGAGGTCAAAGGGCAACTTTATGGGTTCTAGGGATTGAACTCAGTTCACCAAAGCATAT
TCAGTGAGCGCATTCACTCACCGAGCCATCTTGCTTGCTCTGCATTTACTTTTCTATGAACTAC
ACATTTCTGACTTTCCCTTGGGAGCCACATGGAGTCTCCTGGGCAGTGGCATTTGATGATGGTG
TTGGCTTTTGGTGATGGCATTAGCTGAGAGCTTTGGGAAATCAGTGTGACCTAGAGAAGGGTCT
TCTAAAGAGGAGCAGACCCTAGATTAGCCTGTGCACCCCAACATTTCATTTCCTCTAGCTGACA
TGCTGAACTCTTGGCCCAGTCAGTGCTGAGCTGGGCTAGGAAGGAGAGGCCTTTTCTCTTGGTC
CTGAAGGCAGGCAGCTCACAGACTTGGGGGGAGGGGGAGATGTGTTTTAACACAGAACAAGATG
TGATACCCATGAAAGTCAGGAGTGTGACCCCGTAAACCTCTCCTGGAGTGCGGTGGGTAGATAA
GATGGCAGAATACAGGCATGT

hide sequence

RefSeq Acc Id:

XM_006238086 ⟹ XP_006238148

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,175,330 - 65,211,479 (-)	NCBI
mRatBN7.2	5	60,385,368 - 60,415,869 (-)	NCBI
Rnor_6.0	5	61,703,474 - 61,733,915 (-)	NCBI
Rnor_5.0	5	66,201,839 - 66,250,472 (-)	NCBI

Sequence:

show sequence

CTGCAACGATCCCGCCTCAGCTTTGCACAGGCCCAGCAGTATTTTCCCGGCGGCCCCTGCGCCG
ACGACTTTGGAGACTTCCGGAGATAGATACTTGACTGAAAGGGATCCATCCCACTGATAAAACC
AGATGCCTTCTCCCACTTCAGCAGACGAAGAGGATGGCCTGGAGACCTGTGTTTTAAAGACTTT
TGATCTGGATTTAAAAGAATCAAATATTGTTACTCCAAGCAATAGTCTCAAAGCAGAGTTAGAT
GGCAGTACAAAGAAGAAATACTCGTTTGCAAAGAAAAAGGCCTTTGCCCTTTTTGTCAAAACCA
AACAAGTTCCAGTGCCTTCTTATGAAGTTAAGGAAAGACGGTGGCGATGTTGTCAGCAGCTGTT
TGCAGAGCAGACCAGCATCCACAGACATGTGGCCACACAGCACGCTGAAGACGTGTACCAGCAG
ACTGCTTCCATTCTCAAGCAGCTCACTGCAGCACTGAGGACCCCACAGAGTCTTACGCCCACAG
ACCGGAGGAGCTCCCCAAAAGACTGTCTCCCTCCTAGTCAGGATGTGTCTGCTTGGCTCCCTGA
TGTGAGCCACGTTAGCCCGCAAGAGCTGAGGAGTGGCCAGGGCAATGAGGAAGGAGAGGTGCTC
CTGTATTACTGCTACTGTGACTTGGAGGACCCCGACTGGGTCTGTGCCTGGCAGGCAGCTCTGT
GCCGTCACCTGCACCTTACAGGCAAGATTCGGATCGCGACAGAAGGAATCAATGGAACCGTTGG
AGGAAGCAAAGTGGCCACCCGACTCTACATGGAAGTCATGCTTTCTTGCCCATTATTTAAGGAT
TACCTGAGCGAGGATGATTTTAAGAGCAGCAAAGGAGGGTCTCACTGCTTCCCGGAATTGCGAG
TCGGTGTGTTCGAAGAGATCGTGCCCATGGGGATCAGCCCCAGTGAGGTCTCCTACAAGAACCC
CGGAATCCATTTATCCCCTGGAGAATTTCATAAAGAAATAGAAAAACTATTGTCACAGGCAAAT
CAGGAACAAGGTGATACTCTCCTACTGGACTGCAGGAACTTCTATGAAAGCAAAATAGGACGAT
TCCAGGGCTGCTTAGCACCAGACATCAGGAAGTTCAGTTACTTCCCTAGCTACGTTGACAAAAA
CCTTGACATTTTCAGGCAGAAGAGGGTGCTGATGTACTGCACTGGGGGCATTCGCTGCGAACGG
GGTTCTGCATACCTCAGAGCCAAGGGAGTGTGTAAGGAAGTGTTTCAGCTCAAGGGTGGCATCC
ACAAGTATCTAGAAGAGTTTCCTGATGGATTTTTCAAAGGGAAGCTGTTTGTTTTTGATGAGCG
GTTTGCCCTGGCCTACAACAGTGCTGTGGTCTCAGGCTCTGGAAAAAGTGGCCTGTGGCGTGAG
CAGTGGACAAAGAGCTCTTCAGGTTATGATAAGAGCAGGAGTCTGTGTCCCCAGCATCCTCAGC
ACATCCTGAAGTTGAAGAACTTGCCTGGAAGTGTGTGTAAGTCTGCATTCCATGGTGAGGTCTG
TAAGTGCCCGCCTTTTTCTGGTGCTTTGGGAAATCAGTGTCTCGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTAAACTTGGTTTTCCACGGGCATCTGACAGCCTCTGACCATCAGCTGAACCTCC
AGGGTTAAGCTCTTTTCATTTTGCAGAAGGTTGGAAGTTATAGAGAACCCTTGGTAGAGCCTGT
GAGGATTTGATGAAAACAGTGTTTTCTTGGTTGATGACACTCAGGGTAAATGTCACCATTAGTC
AAGTTGACAATATAAACCTGTCTCATGCCTTGCTTTTCCTTCTGACTCTCCCACAGATTTGTCA
GACCCACTGCCTTCGTTTCACACCATGTCCTGTTCTCCTTAGTAGCATCAGGAACACGTGGTAA
GTGACTCCACCTGGGACTCGTGAGCAGTTAGCACGTGGGAACAGGTGGGGGACCCATGTTGCCT
TTCATTCTGAGAACTATGCGCGTGCTTGATGAAGAGGACAGACTTTTTCCCTCTTTGTGGAAAA
GGAGTCAAAGGATGCCCTGAACAGACACTGAGGGGATGTGACTTACTTTCACGTTTTATTTTTA
TTATTAGTGTTACATGTGCATGTGGAGGTCAAAGGGCAACTTTATGGGTTCTAGGGATTGAACT
CAGTTCACCAAAGCATATTCAGTGAGCGCATTCACTCACCGAGCCATCTTGCTTGCTCTGCATT
TACTTTTCTATGAACTACACATTTCTGACTTTCCCTTGGGAGCCACATGGAGTCTCCTGGGCAG
TGGCATTTGATGATGGTGTTGGCTTTTGGTGATGGCATTAGCTGAGAGCTTTGGGAAATCAGTG
TGACCTAGAGAAGGGTCTTCTAAAGAGGAGCAGACCCTAGATTAGCCTGTGCACCCCAACATTT
CATTTCCTCTAGCTGACATGCTGAACTCTTGGCCCAGTCAGTGCTGAGCTGGGCTAGGAAGGAG
AGGCCTTTTCTCTTGGTCCTGAAGGCAGGCAGCTCACAGACTTGGGGGGAGGGGGAGATGTGTT
TTAACACAGAACAAGATGTGATACCCATGAAAGTCAGGAGTGTGACCCCGTAAACCTCTCCTGG
AGTGCGGTGGGTAGATAAGATGGCAGAATACAGGCATGT

hide sequence

RefSeq Acc Id:

XM_006238088 ⟹ XP_006238150

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,188,829 - 65,211,329 (-)	NCBI
mRatBN7.2	5	60,393,223 - 60,415,712 (-)	NCBI
Rnor_6.0	5	61,711,318 - 61,733,817 (-)	NCBI
Rnor_5.0	5	66,201,839 - 66,250,472 (-)	NCBI

Sequence:

show sequence

TCAGGGACTTTCTACGCACGCGCGAGCCGGGGGGGGGGCGTGGGCTCCAGGGCGGGGAGCAGCG
CCAAGTTGGAGAAGGGAGACCCAGGAAAGGCCTAGGTATTGCGGATACTTGACTGAAAGGGATC
CATCCCACTGATAAAACCAGATGCCTTCTCCCACTTCAGCAGACGAAGAGGATGGCCTGGAGAC
CTGTGTTTTAAAGACTTTTGATCTGGATTTAAAAGAATCAAATATTGTTACTCCAAGCAATAGT
CTCAAAGCAGAGTTAGATGGCAGTACAAAGAAGAAATACTCGTTTGCAAAGAAAAAGGCCTTTG
CCCTTTTTGTCAAAACCAAACAAGTTCCAGTGCCTTCTTATGAAGTTAAGGAAAGACGGTGGCG
ATGTTGTCAGCAGCTGTTTGCAGAGCAGACCAGCATCCACAGACATGTGGCCACACAGCACGCT
GAAGACGTGTACCAGCAGACTGCTTCCATTCTCAAGCAGCTCACTGCAGCACTGAGGACCCCAC
AGAGTCTTACGCCCACAGACCGGAGGAGCTCCCCAAAAGACTGTCTCCCTCCTAGTCAGGATGT
GTCTGCTTGGCTCCCTGATGTGAGCCACGTTAGCCCGCAAGAGCTGAGGAGTGGCCAGGGCAAT
GAGGAAGGAGAGGTGCTCCTGTATTACTGCTACTGTGACTTGGAGGACCCCGACTGGGTCTGTG
CCTGGCAGGCAGCTCTGTGCCGTCACCTGCACCTTACAGGCAAGATTCGGATCGCGACAGAAGG
AATCAATGGAACCGTTGGAGGAAGCAAAGTGGCCACCCGACTCTACATGGAAGTCATGCTTTCT
TGCCCATTATTTAAGGATTACCTGAGCGAGGATGATTTTAAGAGCAGCAAAGGAGGGTCTCACT
GCTTCCCGGAATTGCGAGTCGGTGTGTTCGAAGAGATCGTGCCCATGGGGATCAGCCCCAGTGA
GGTCTCCTACAAGAACCCCGGAATCCATTTATCCCCTGGAGAATTTCATAAAGAAATAGAAAAA
CTATTGTCACAGGCAAATCAGGAACAAGGTGATACTCTCCTACTGGACTGCAGGAACTTCTATG
AAAGCAAAATAGGACGATTCCAGGGCTGCTTAGCACCAGACATCAGGAAGTTCAGTTACTTCCC
TAGCTACGTTGACAAAAACCTTGACATTTTCAGGCAGAAGAGGGTGCTGATGTACTGCACTGGG
GGCATTCGCTGCGAACGGGGTTCTGCATACCTCAGAGCCAAGGGAGTGTGTAAGGAAGTGTTTC
AGCTCAAGGGTGGCATCCACAAGTATCTAGAAGAGTTTCCTGATGGATTTTTCAAAGGGAAGCT
GTTTGTTTTTGATGAGCGGTTTGCCCTGGCCTACAACAGTGCTGTGGTCTCAGAATGTTCATAT
TGTGGAGCCCCGTGGGACCAATATAAACTCTGTTCTACTCCTCAATGCCGCCAGCTTGTGTTGA
CCTGTTCTGCCTGTCAAGGACAAGGATTCACAGCCTGTTGTGTCATGTGTCAAGACAAAGGGGG
CAAGCAGGCTTCAGACCCCACCCAGGACAGTTTTAAAGAAGAGTGTGAGTGCACAGCCCGGAGG
CCACGCATTCCGCAGGAGCAGCGTGCGTGACCCCCTGAGCCTGGGCCCGGAGCCTGCGGCTGCT
GAGGCTGAACTGCTCGTTCAGCAGTCACTGGCTTCACGACGTAGAGTTACATAGCCATGTGCAG
ATGGTGAAGGTTGTAGAAACAAATGGAGAGTGTCCATGCTGGTCACTACCACCCTAGCAGATAG
ATGGCCACAGCAAAGGACCAGGAAGTCCAGCGTAGGCTACCTAATTTACCTGCTTTGATTGAGA
AGATGCTAGAGCCTGGGAAAAGGTAAACCATGTGGGATCCCAGTGTTGATGAGAGATTGTCTTG
AGCTTGGTGGCTCCTCGGCCGTGCAGCAGGGAGGCCCCGGCGCCACTCTAGTCCCCTGTACTGT
CCATAGCCTTACAGTTTGGTGTCAGCAAACCTTCACCCTGGCAGCAAAAGTATAAAAGTTGGGC
CCTGGGTATGGACTCTTAAACCAGACCAGCTTCTATCTCCCCCTGCCTCATTCTCTTCCCTGAC
TGCCCGAAGGCTCTGTGGCTTTGACCACCTCGTGCCTTGGAGCATTAATGAATCTGCCAACCCA
TCCCTTTATATGTGATCATGGCACTACTGAGTAGGGCCAGAGACCACGTGGCCTTCAGAATCTA
AAGCAATTACACTTTGTTCCTTCACGGAGGTCTTTGGAAAGAGGTGGCCCATGCTTCTATTGAT
TAGGTTTCTTTAAAGATGGTCTTCTAACAGCTCTGCATTCCCCAGCAGTCCCTCTCTCTGCTTG
TAAGCATCCTCAGGGATCCAGATGAGCAGCAGGCTTACGTCACATGTGGCACACAGGACATTCA
TTAGTGAGCTCATACAGCACGGTAGCGACCTAACCTCCTGGCCTTTGGGCACATGTTCCTGTCT
CACAATTCTTAAGAAGCACACAGGCCATACATACACCAAATGGCTTTAATATTATTTTGCAGTT
TCCAGTGATGCAGAATGCAGCTGCAGTTGTGTTTCAAGGAGAAGCTGAGTGGAGCTGGCTGTCC
CTGCAGCTTGGTGCCACTCCTGGGCCTCAGTGACCACTCACAGTGCTGAGGCCCCGATGCCACT
CTAGTTACCCTGTGCTGTCCATGGCCTTACAGTCCGGTGTGCAGGTCTTAGGTCAGAAGCCCCT
GGCTGTGCTCTGCAGCTTTTGAGCCATCACTGTCATATCGGCTGAATCCCTAAGGAAAACACTC
CCCAAAGCAACAAAAGTACTAGTTTAACTGGCACTGTGGTCTATTAAAAGGCACAAGAACAGTG
TATTTTAACATTTTTACTGGCTCCCATGGTGTTAAAGGGATCCAGTAGGAATGCCAAGATTAGG
TTTCAGAATAATTCCTTGTGTTGTATGTCCAGGATCTCCTAATTCCTTACCATTGGGATGTTGT
ACTCTGCTGTCCTTCAGAGGCTTCGTGTGTGATTTGATTTGTCTCCTAAGTGACCGGGCAGGCA
CTTGGTGTCTGTAAGCAGGGCCATGCTAAATACCACAGGCATGGTGGACTGGAAATTCACCCAA
TGGTGTTGATCTCACATAAGCCGTTGGCTCACTGCGGTATTGGAAGATGTTTTTATGTGGTTGT
AAGTTTTCATCCATCATGAAGTTGGCATTCAATAAAGAAGAAATGATTTCTGACTACA

hide sequence

RefSeq Acc Id:

XM_006238089 ⟹ XP_006238151

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,167,362 - 65,211,322 (-)	NCBI
mRatBN7.2	5	60,371,751 - 60,415,712 (-)	NCBI
Rnor_6.0	5	61,693,203 - 61,733,817 (-)	NCBI
Rnor_5.0	5	66,201,839 - 66,250,472 (-)	NCBI

Sequence:

show sequence

TCAGGGACTTTCTACGCACGCGCGAGCCGGGGGGGGGGCGTGGGCTCCAGGGCGGGGAGCAGCG
CCAAGTTGGAGAAGGGAGACCCAGGAAAGGCCTAGGTATTGCGGATACTTGACTGAAAGGGATC
CATCCCACTGATAAAACCAGATGCCTTCTCCCACTTCAGCAGACGAAGAGGATGGCCTGGAGAC
CTGTGTTTTAAAGACTTTTGATCTGGATTTAAAAGAATCAAATATTGTTACTCCAAGCAATAGT
CTCAAAGCAGAGTTAGATGGCAGTACAAAGAAGAAATACTCGTTTGCAAAGAAAAAGGCCTTTG
CCCTTTTTGTCAAAACCAAACAAGTTCCAGTGCCTTCTTATGAAGTTAAGGAAAGACGGTGGCG
ATGTTGTCAGCAGCTGTTTGCAGAGCAGACCAGCATCCACAGACATGTGGCCACACAGCACGCT
GAAGACGTGTACCAGCAGACTGCTTCCATTCTCAAGCAGCTCACTGCAGCACTGAGGACCCCAC
AGAGTCTTACGCCCACAGACCGGAGGAGCTCCCCAAAAGACTGTCTCCCTCCTAGTCAGGATGT
GTCTGCTTGGCTCCCTGATGTGAGCCACGTTAGCCCGCAAGAGCTGAGGAGTGGCCAGGGCAAT
GAGGAAGGAGAGGTGCTCCTGTATTACTGCTACTGTGACTTGGAGGACCCCGACTGGGTCTGTG
CCTGGCAGGCAGCTCTGTGCCGTCACCTGCACCTTACAGGCAAGATTCGGATCGCGACAGAAGG
AATCAATGGAACCGTTGGAGGAAGCAAAGTGGCCACCCGACTCTACATGGAAGTCATGCTTTCT
TGCCCATTATTTAAGGATTACCTGAGCGAGGATGATTTTAAGAGCAGCAAAGGAGGGTCTCACT
GCTTCCCGGAATTGCGAGTCGGTGTGTTCGAAGAGATCGTGCCCATGGGGATCAGCCCCAGTGA
GGTCTCCTACAAGAACCCCGGAATCCATTTATCCCCTGGAGAATTTCATAAAGAAATAGAAAAA
CTATTGTCACAGGCAAATCAGGAACAAGGTGATACTCTCCTACTGGACTGCAGGAACTTCTATG
AAAGCAAAATAGGACGATTCCAGGGCTGCTTAGCACCAGACATCAGGAAGTTCAGTTACTTCCC
TAGCTACGTTGACAAAAACCTTGACATTTTCAGGCAGAAGAGGGTGCTGATGTACTGCACTGGG
GGCATTCGCTGCGAACGGGGTTCTGCATACCTCAGAGCCAAGGGAGTGTGTAAGGAAGTGTTTC
AGCTCAAGGGTGGCATCCACAAGTATCTAGAAGAGTTTCCTGATGGATTTTTCAAAGGGAAGCT
GTTTGTTTTTGATGAGCGGTTTGCCCTGGCCTACAACAGTGCTGTGGTCTCAGGCTCTGGAAAA
AGTGGCCTGTGGCGTGAGCAGTGGACAAAGAGCTCTTCAGGTTATGATAAGAGCAGGAGTCTGT
GTCCCCAGCATCCTCAGCACATCCTGAAGTTGAAGAACTTGCCTGGAAGTGTGTATTTGTCAGA
CCCACTGCCTTCGTTTCACACCATGTCCTGTTCTCCTTAGTAGCATCAGGAACACGTGACAACC
AAGACCAAAAGAGTTGCCCCCAGGAGAAATGAGGAAACCACAGAACTCAAACAAGCAGGAGCTA
ACTCCACAGGATAAAGACAGAACCACCCAGAGAGGAGGAGCAACAGGAAGGAGACTTCAAAGCC
AGGTCAAATGGAAACACTGAGGGAGACAGGCTGCTCCTGGTGAACAGCACCACCGTTTATGGGA
TCCGTGCACTCTGAACTCTACGTCTCAGGTTCCTTGACAGAACAGCTGAGGCGACCTGCAGGGC
TTGGAAGGAAGCTCGTTTGTTCTGGGTCTAAGAAAGGACACCCTCAAAGCCAAGGCATAAAGCT
GATGCTGAGGAGAGACCCAACACGTGGGGACACAAAGAAGTTGGCAGAGCACATGGCTAGAAAG
AAAGCAGGCAGTGTTGATGGAGGGTCTGCCCGGGAACACAGTGGGCTCTGGGGCATCTGTCATC
AGTGTCCTCTGCTCTGCCTAGCAACGAGTGGGCAGGTGCTCACTACCCTGTGTGGGGAACGCAC
GAGCAGACCGCTGCCTG

hide sequence

RefSeq Acc Id:

XM_006238090 ⟹ XP_006238152

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,175,330 - 65,211,313 (-)	NCBI
mRatBN7.2	5	60,371,751 - 60,415,712 (-)	NCBI
Rnor_6.0	5	61,699,669 - 61,733,817 (-)	NCBI
Rnor_5.0	5	66,201,839 - 66,250,472 (-)	NCBI

Sequence:

show sequence

TCAGGGACTTTCTACGCACGCGCGAGCCGGGGGGGGGGCGTGGGCTCCAGGGCGGGGAGCAGCG
CCAAGTTGGAGAAGGGAGACCCAGGAAAGGCCTAGGTATTGCGGATACTTGACTGAAAGGGATC
CATCCCACTGATAAAACCAGATGCCTTCTCCCACTTCAGCAGACGAAGAGGATGGCCTGGAGAC
CTGTGTTTTAAAGACTTTTGATCTGGATTTAAAAGAATCAAATATTGTTACTCCAAGCAATAGT
CTCAAAGCAGAGTTAGATGGCAGTACAAAGAAGAAATACTCGTTTGCAAAGAAAAAGGCCTTTG
CCCTTTTTGTCAAAACCAAACAAGTTCCAGTGCCTTCTTATGAAGTTAAGGAAAGACGGTGGCG
ATGTTGTCAGCAGCTGTTTGCAGAGCAGACCAGCATCCACAGACATGTGGCCACACAGCACGCT
GAAGACGTGTACCAGCAGACTGCTTCCATTCTCAAGCAGCTCACTGCAGCACTGAGGACCCCAC
AGAGTCTTACGCCCACAGACCGGAGGAGCTCCCCAAAAGACTGTCTCCCTCCTAGTCAGGATGT
GTCTGCTTGGCTCCCTGATGTGAGCCACGTTAGCCCGCAAGAGCTGAGGAGTGGCCAGGGCAAT
GAGGAAGGAGAGGTGCTCCTGTATTACTGCTACTGTGACTTGGAGGACCCCGACTGGGTCTGTG
CCTGGCAGGCAGCTCTGTGCCGTCACCTGCACCTTACAGGCAAGATTCGGATCGCGACAGAAGG
AATCAATGGAACCGTTGGAGGAAGCAAAGTGGCCACCCGACTCTACATGGAAGTCATGCTTTCT
TGCCCATTATTTAAGGATTACCTGAGCGAGGATGATTTTAAGAGCAGCAAAGGAGGGTCTCACT
GCTTCCCGGAATTGCGAGTCGGTGTGTTCGAAGAGATCGTGCCCATGGGGATCAGCCCCAGTGA
GGTCTCCTACAAGAACCCCGGAATCCATTTATCCCCTGGAGAATTTCATAAAGAAATAGAAAAA
CTATTGTCACAGGCAAATCAGGAACAAGGTGATACTCTCCTACTGGACTGCAGGAACTTCTATG
AAAGCAAAATAGGACGATTCCAGGGCTGCTTAGCACCAGACATCAGGAAGTTCAGTTACTTCCC
TAGCTACGTTGACAAAAACCTTGACATTTTCAGGCAGAAGAGGGTGCTGATGTACTGCACTGGG
GGCATTCGCTGCGAACGGGGTTCTGCATACCTCAGAGCCAAGGGAGTGTGTAAGGAAGTGTTTC
AGCTCAAGGGTGGCATCCACAAGTATCTAGAAGAGTTTCCTGATGGATTTTTCAAAGGGAAGCT
GTTTGTTTTTGATGAGCGGTTTGCCCTGGCCTACAACAGTGCTGTGGTCTCAGGCTCTGGAAAA
AGTGGCCTGTGGCGTGAGCAGTGGACAAAGAGCTCTTCAGGTTATGATAAGAGCAGGAGTCTGT
GTCCCCAGCATCCTCAGCACATCCTGAAGTTGAAGAACTTGCCTGGAAGTGTGTATTTGTCAGA
CCCACTGCCTTCGTTTCACACCATGTCCTGTTCTCCTTAGTAGCATCAGGAACACGTGAAAATT
CCCAAGCTAGTACTGGAGAACCACCACCTTGTTTTTTTTGTTTGTT

hide sequence

RefSeq Acc Id:

XM_039110233 ⟹ XP_038966161

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,175,330 - 65,211,299 (-)	NCBI
mRatBN7.2	5	60,385,368 - 60,415,692 (-)	NCBI

RefSeq Acc Id:

XM_063287909 ⟹ XP_063143979

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,188,829 - 65,211,303 (-)	NCBI

RefSeq Acc Id:

XM_063287910 ⟹ XP_063143980

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,175,330 - 65,211,479 (-)	NCBI

RefSeq Acc Id:

XM_063287911 ⟹ XP_063143981

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,167,362 - 65,211,479 (-)	NCBI

RefSeq Acc Id:

XM_063287912 ⟹ XP_063143982

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,175,330 - 65,211,479 (-)	NCBI

RefSeq Acc Id:

XM_063287913 ⟹ XP_063143983

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,175,330 - 65,211,313 (-)	NCBI

RefSeq Acc Id:

XM_063287914 ⟹ XP_063143984

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,167,362 - 65,211,479 (-)	NCBI

RefSeq Acc Id:

XM_063287915 ⟹ XP_063143985

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,188,829 - 65,211,313 (-)	NCBI

RefSeq Acc Id:

XM_063287916 ⟹ XP_063143986

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,197,446 - 65,211,299 (-)	NCBI

RefSeq Acc Id:

XR_010066410

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,175,330 - 65,211,479 (-)	NCBI

RefSeq Acc Id:

XR_010066411

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,167,362 - 65,211,479 (-)	NCBI

RefSeq Acc Id:

XR_010066412

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	65,190,631 - 65,211,479 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001102133	(Get FASTA)	NCBI Sequence Viewer
	NP_001423892	(Get FASTA)	NCBI Sequence Viewer
	NP_001423893	(Get FASTA)	NCBI Sequence Viewer
	NP_001423894	(Get FASTA)	NCBI Sequence Viewer
	NP_001423895	(Get FASTA)	NCBI Sequence Viewer
	NP_001423896	(Get FASTA)	NCBI Sequence Viewer
	NP_001423897	(Get FASTA)	NCBI Sequence Viewer
	NP_001423898	(Get FASTA)	NCBI Sequence Viewer
	NP_001423899	(Get FASTA)	NCBI Sequence Viewer
	XP_006238146	(Get FASTA)	NCBI Sequence Viewer
	XP_006238147	(Get FASTA)	NCBI Sequence Viewer
	XP_006238148	(Get FASTA)	NCBI Sequence Viewer
	XP_006238150	(Get FASTA)	NCBI Sequence Viewer
	XP_006238151	(Get FASTA)	NCBI Sequence Viewer
	XP_006238152	(Get FASTA)	NCBI Sequence Viewer
	XP_038966161	(Get FASTA)	NCBI Sequence Viewer
	XP_063143979	(Get FASTA)	NCBI Sequence Viewer
	XP_063143980	(Get FASTA)	NCBI Sequence Viewer
	XP_063143981	(Get FASTA)	NCBI Sequence Viewer
	XP_063143982	(Get FASTA)	NCBI Sequence Viewer
	XP_063143983	(Get FASTA)	NCBI Sequence Viewer
	XP_063143984	(Get FASTA)	NCBI Sequence Viewer
	XP_063143985	(Get FASTA)	NCBI Sequence Viewer
	XP_063143986	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL98830	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000012915
	ENSRNOP00000012915.5
	ENSRNOP00000107704
	ENSRNOP00000107704.1
	ENSRNOP00000110236
	ENSRNOP00000110236.1

RefSeq Acc Id:

NP_001102133 ⟸ NM_001108663

- UniProtKB:

D4ADA5 (UniProtKB/TrEMBL), A6IJB0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPSPTSADEEDGLETCVLKTFDLDLKESNIVTPSNSLKAELDGSTKKKYSFAKKKAFALFVKTK
QVPVPSYEVKERRWRCCQQLFAEQTSIHRHVATQHAEDVYQQTASILKQLTAALRTPQSLTPTD
RRSSPKDCLPPSQDVSAWLPDVSHVSPQELRSGQGNEEGEVLLYYCYCDLEDPDWVCAWQAALC
RHLHLTGKIRIATEGINGTVGGSKVATRLYMEVMLSCPLFKDYLSEDDFKSSKGGSHCFPELRV
GVFEEIVPMGISPSEVSYKNPGIHLSPGEFHKEIEKLLSQANQEQGDTLLLDCRNFYESKIGRF
QGCLAPDIRKFSYFPSYVDKNLDIFRQKRVLMYCTGGIRCERGSAYLRAKGVCKEVFQLKGGIH
KYLEEFPDGFFKGKLFVFDERFALAYNSAVVSECSYCGAPWDQYKLCSTPQCRQLVLTCSACQG
QGFTACCVMCQDKGGKQASDPTQDSFKEECECTARRPRIPQEQRA

hide sequence

RefSeq Acc Id:	XP_006238151 ⟸ XM_006238089
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2KB35 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPSPTSADEEDGLETCVLKTFDLDLKESNIVTPSNSLKAELDGSTKKKYSFAKKKAFALFVKTK QVPVPSYEVKERRWRCCQQLFAEQTSIHRHVATQHAEDVYQQTASILKQLTAALRTPQSLTPTD RRSSPKDCLPPSQDVSAWLPDVSHVSPQELRSGQGNEEGEVLLYYCYCDLEDPDWVCAWQAALC RHLHLTGKIRIATEGINGTVGGSKVATRLYMEVMLSCPLFKDYLSEDDFKSSKGGSHCFPELRV GVFEEIVPMGISPSEVSYKNPGIHLSPGEFHKEIEKLLSQANQEQGDTLLLDCRNFYESKIGRF QGCLAPDIRKFSYFPSYVDKNLDIFRQKRVLMYCTGGIRCERGSAYLRAKGVCKEVFQLKGGIH KYLEEFPDGFFKGKLFVFDERFALAYNSAVVSGSGKSGLWREQWTKSSSGYDKSRSLCPQHPQH ILKLKNLPGSVYLSDPLPSFHTMSCSP hide sequence

RefSeq Acc Id:	XP_006238152 ⟸ XM_006238090
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2KB35 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPSPTSADEEDGLETCVLKTFDLDLKESNIVTPSNSLKAELDGSTKKKYSFAKKKAFALFVKTK QVPVPSYEVKERRWRCCQQLFAEQTSIHRHVATQHAEDVYQQTASILKQLTAALRTPQSLTPTD RRSSPKDCLPPSQDVSAWLPDVSHVSPQELRSGQGNEEGEVLLYYCYCDLEDPDWVCAWQAALC RHLHLTGKIRIATEGINGTVGGSKVATRLYMEVMLSCPLFKDYLSEDDFKSSKGGSHCFPELRV GVFEEIVPMGISPSEVSYKNPGIHLSPGEFHKEIEKLLSQANQEQGDTLLLDCRNFYESKIGRF QGCLAPDIRKFSYFPSYVDKNLDIFRQKRVLMYCTGGIRCERGSAYLRAKGVCKEVFQLKGGIH KYLEEFPDGFFKGKLFVFDERFALAYNSAVVSGSGKSGLWREQWTKSSSGYDKSRSLCPQHPQH ILKLKNLPGSVYLSDPLPSFHTMSCSP hide sequence

RefSeq Acc Id:

XP_006238148 ⟸ XM_006238086

- Peptide Label:

isoform X1

- Sequence:

show sequence

MPSPTSADEEDGLETCVLKTFDLDLKESNIVTPSNSLKAELDGSTKKKYSFAKKKAFALFVKTK
QVPVPSYEVKERRWRCCQQLFAEQTSIHRHVATQHAEDVYQQTASILKQLTAALRTPQSLTPTD
RRSSPKDCLPPSQDVSAWLPDVSHVSPQELRSGQGNEEGEVLLYYCYCDLEDPDWVCAWQAALC
RHLHLTGKIRIATEGINGTVGGSKVATRLYMEVMLSCPLFKDYLSEDDFKSSKGGSHCFPELRV
GVFEEIVPMGISPSEVSYKNPGIHLSPGEFHKEIEKLLSQANQEQGDTLLLDCRNFYESKIGRF
QGCLAPDIRKFSYFPSYVDKNLDIFRQKRVLMYCTGGIRCERGSAYLRAKGVCKEVFQLKGGIH
KYLEEFPDGFFKGKLFVFDERFALAYNSAVVSGSGKSGLWREQWTKSSSGYDKSRSLCPQHPQH
ILKLKNLPGSVCKSAFHGEVCKCPPFSGALGNQCLVCVCVCVCVCVCVCVCVCMCVCVCVCVCV
CVCKLGFPRASDSL

hide sequence

RefSeq Acc Id:

XP_006238146 ⟸ XM_006238084

- Peptide Label:

isoform X1

- Sequence:

show sequence

MPSPTSADEEDGLETCVLKTFDLDLKESNIVTPSNSLKAELDGSTKKKYSFAKKKAFALFVKTK
QVPVPSYEVKERRWRCCQQLFAEQTSIHRHVATQHAEDVYQQTASILKQLTAALRTPQSLTPTD
RRSSPKDCLPPSQDVSAWLPDVSHVSPQELRSGQGNEEGEVLLYYCYCDLEDPDWVCAWQAALC
RHLHLTGKIRIATEGINGTVGGSKVATRLYMEVMLSCPLFKDYLSEDDFKSSKGGSHCFPELRV
GVFEEIVPMGISPSEVSYKNPGIHLSPGEFHKEIEKLLSQANQEQGDTLLLDCRNFYESKIGRF
QGCLAPDIRKFSYFPSYVDKNLDIFRQKRVLMYCTGGIRCERGSAYLRAKGVCKEVFQLKGGIH
KYLEEFPDGFFKGKLFVFDERFALAYNSAVVSGSGKSGLWREQWTKSSSGYDKSRSLCPQHPQH
ILKLKNLPGSVCKSAFHGEVCKCPPFSGALGNQCLVCVCVCVCVCVCVCVCVCMCVCVCVCVCV
CVCKLGFPRASDSL

hide sequence

RefSeq Acc Id:

XP_006238147 ⟸ XM_006238085

- Peptide Label:

isoform X1

- Sequence:

show sequence

MPSPTSADEEDGLETCVLKTFDLDLKESNIVTPSNSLKAELDGSTKKKYSFAKKKAFALFVKTK
QVPVPSYEVKERRWRCCQQLFAEQTSIHRHVATQHAEDVYQQTASILKQLTAALRTPQSLTPTD
RRSSPKDCLPPSQDVSAWLPDVSHVSPQELRSGQGNEEGEVLLYYCYCDLEDPDWVCAWQAALC
RHLHLTGKIRIATEGINGTVGGSKVATRLYMEVMLSCPLFKDYLSEDDFKSSKGGSHCFPELRV
GVFEEIVPMGISPSEVSYKNPGIHLSPGEFHKEIEKLLSQANQEQGDTLLLDCRNFYESKIGRF
QGCLAPDIRKFSYFPSYVDKNLDIFRQKRVLMYCTGGIRCERGSAYLRAKGVCKEVFQLKGGIH
KYLEEFPDGFFKGKLFVFDERFALAYNSAVVSGSGKSGLWREQWTKSSSGYDKSRSLCPQHPQH
ILKLKNLPGSVCKSAFHGEVCKCPPFSGALGNQCLVCVCVCVCVCVCVCVCVCMCVCVCVCVCV
CVCKLGFPRASDSL

hide sequence

RefSeq Acc Id:

XP_006238150 ⟸ XM_006238088

- Peptide Label:

isoform X2

- Sequence:

show sequence

MPSPTSADEEDGLETCVLKTFDLDLKESNIVTPSNSLKAELDGSTKKKYSFAKKKAFALFVKTK
QVPVPSYEVKERRWRCCQQLFAEQTSIHRHVATQHAEDVYQQTASILKQLTAALRTPQSLTPTD
RRSSPKDCLPPSQDVSAWLPDVSHVSPQELRSGQGNEEGEVLLYYCYCDLEDPDWVCAWQAALC
RHLHLTGKIRIATEGINGTVGGSKVATRLYMEVMLSCPLFKDYLSEDDFKSSKGGSHCFPELRV
GVFEEIVPMGISPSEVSYKNPGIHLSPGEFHKEIEKLLSQANQEQGDTLLLDCRNFYESKIGRF
QGCLAPDIRKFSYFPSYVDKNLDIFRQKRVLMYCTGGIRCERGSAYLRAKGVCKEVFQLKGGIH
KYLEEFPDGFFKGKLFVFDERFALAYNSAVVSECSYCGAPWDQYKLCSTPQCRQLVLTCSACQG
QGFTACCVMCQDKGGKQASDPTQDSFKEECECTARRPRIPQEQRA

hide sequence

Ensembl Acc Id:

ENSRNOP00000075637 ⟸ ENSRNOT00000090566

Ensembl Acc Id:

ENSRNOP00000012915 ⟸ ENSRNOT00000012915

RefSeq Acc Id:	XP_038966161 ⟸ XM_039110233
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063143981 ⟸ XM_063287911
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063143984 ⟸ XM_063287914
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063143982 ⟸ XM_063287912
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063143980 ⟸ XM_063287910
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063143983 ⟸ XM_063287913
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063143985 ⟸ XM_063287915
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063143979 ⟸ XM_063287909
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063143986 ⟸ XM_063287916
- Peptide Label:	isoform X5

Ensembl Acc Id:

ENSRNOP00000110236 ⟸ ENSRNOT00000152823

Ensembl Acc Id:

ENSRNOP00000107704 ⟸ ENSRNOT00000157050

Protein Domains

Rhodanese

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4ADA5-F1-model_v2	AlphaFold	D4ADA5	1-493	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693717

Promoter ID:

EPDNEW_R4233

Type:

initiation region

Name:

Tstd2_1

Description:

thiosulfate sulfurtransferase like domain containing 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	61,733,757 - 61,733,817	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310893	AgrOrtholog
BioCyc Gene	G2FUF-41416	BioCyc
BioCyc Pathway	PWY-5350 [thiosulfate disproportionation IV (rhodanese)]	BioCyc
	PWY-7927 [sulfide oxidation IV (mitochondria)]	BioCyc
BioCyc Pathway Image	PWY-5350	BioCyc
	PWY-7927	BioCyc
Ensembl Genes	ENSRNOG00000009724	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000012915	ENTREZGENE
	ENSRNOT00000012915.7	UniProtKB/TrEMBL
	ENSRNOT00000152823	ENTREZGENE
	ENSRNOT00000152823.1	UniProtKB/TrEMBL
	ENSRNOT00000157050	ENTREZGENE
	ENSRNOT00000157050.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.70.100	UniProtKB/TrEMBL
	3.40.250.10	UniProtKB/TrEMBL
InterPro	DUF3650	UniProtKB/TrEMBL
	Rhodanese-like	UniProtKB/TrEMBL
	Rhodanese-like_dom_sf	UniProtKB/TrEMBL
	TrhO	UniProtKB/TrEMBL
	UPF0176_N	UniProtKB/TrEMBL
KEGG Report	rno:362514	UniProtKB/TrEMBL
NCBI Gene	362514	ENTREZGENE
PANTHER	PTHR43268	UniProtKB/TrEMBL
	THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2	UniProtKB/TrEMBL
Pfam	Rhodanese	UniProtKB/TrEMBL
	Rhodanese_C	UniProtKB/TrEMBL
	TSTD2_N	UniProtKB/TrEMBL
	UPF0176_N	UniProtKB/TrEMBL
PhenoGen	Tstd2	PhenoGen
PROSITE	RHODANESE_3	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000009724	RatGTEx
SMART	RHOD	UniProtKB/TrEMBL
Superfamily-SCOP	Rhodanese-like	UniProtKB/TrEMBL
UniProt	A0A0G2KB35	ENTREZGENE
	A0ABK0LPI9_RAT	UniProtKB/TrEMBL
	A0ABK0LVF5_RAT	UniProtKB/TrEMBL
	A6IJB0	ENTREZGENE, UniProtKB/TrEMBL
	D4ADA5	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-04-27	Tstd2	thiosulfate sulfurtransferase like domain containing 2	Tstd2	thiosulfate sulfurtransferase (rhodanese)-like domain containing 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2010-02-12	Tstd2	thiosulfate sulfurtransferase (rhodanese)-like domain containing 2	RGD1310893	similar to hypothetical protein 3010020C06	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1310893	similar to hypothetical protein 3010020C06	RGD1310893_predicted	similar to hypothetical protein 3010020C06 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-20	RGD1310893_predicted	similar to hypothetical protein 3010020C06 (predicted)	LOC362514_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC362514_predicted	similar to hypothetical protein 3010020C06 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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