Tagln2 (transgelin 2) - Rat Genome Database

Name: Tagln2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Tagln2 (transgelin 2) Rattus norvegicus

Analyze

Symbol:

Tagln2

Name:

transgelin 2

RGD ID:

1310840

Description:

Predicted to enable actin filament binding activity. Predicted to be involved in actin filament organization and epithelial cell differentiation. Predicted to be active in actin cytoskeleton. Orthologous to human TAGLN2 (transgelin 2); INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; 17beta-estradiol.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC304983; transgelin-2

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TAGLN2 (transgelin 2)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Tagln2 (transgelin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tagln2 (transgelin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TAGLN2 (transgelin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TAGLN2 (transgelin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tagln2 (transgelin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TAGLN2 (transgelin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TAGLN2 (transgelin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tagln2 (transgelin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	TAGLN3 (transgelin 3)	HGNC	OrthoDB
Homo sapiens (human):	EPB41L5 (erythrocyte membrane protein band 4.1 like 5)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	TAGLN2 (transgelin 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Tagln2 (transgelin 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	tagln2 (transgelin 2)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Chd64	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoInspector)
Saccharomyces cerevisiae (baker's yeast):	SCP1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|SonicParanoid)
Caenorhabditis elegans (roundworm):	cpn-2	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG5023	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoInspector)
Drosophila melanogaster (fruit fly):	Mp20	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoInspector)
Xenopus tropicalis (tropical clawed frog):	tagln2	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	87,499,350 - 87,506,328 (+)	NCBI		GRCr8
mRatBN7.2	13	84,966,980 - 84,973,973 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	84,967,009 - 84,973,972 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	87,470,400 - 87,477,325 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	88,870,673 - 88,877,596 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	86,055,413 - 86,062,336 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	90,807,196 - 90,814,119 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	90,807,199 - 90,814,119 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	95,407,077 - 95,414,000 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	88,505,258 - 88,512,178 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	88,694,141 - 88,701,062 (+)	NCBI
Celera	13	84,576,664 - 84,583,584 (+)	NCBI		Celera
Cytogenetic Map	13	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autoimmune interstitial lung, joint, and kidney disease (ISO)

Chemical and Drug Induced Liver Injury (ISO)

Experimental Liver Cirrhosis (ISO)

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

hepatocellular carcinoma (ISO)

liver cirrhosis (ISO)

parathyroid carcinoma (ISO)

renal cell carcinoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

(S)-nicotine (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

1-naphthyl isothiocyanate (EXP)

17alpha-ethynylestradiol (EXP)

17beta-estradiol (EXP,ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2-methylcholine (ISO)

4,4'-diaminodiphenylmethane (EXP)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (EXP,ISO)

amitrole (EXP)

amphetamine (EXP)

arsenite(3-) (ISO)

atrazine (ISO)

benzatropine (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

Bisphenol B (ISO)

bisphenol F (ISO)

bleomycin A2 (EXP)

bortezomib (ISO)

buspirone (EXP)

butan-1-ol (ISO)

cadmium dichloride (EXP,ISO)

calycosin (ISO)

cannabidiol (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

choline (ISO)

ciprofibrate (ISO)

cisplatin (ISO)

clobetasol (ISO)

clozapine (ISO)

cobalt dichloride (ISO)

CU-O LINKAGE (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

dextran sulfate (ISO)

diallyl trisulfide (ISO)

dibutyl phthalate (EXP,ISO)

dihydroartemisinin (ISO)

diquat (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

elemental selenium (ISO)

endosulfan (EXP)

entinostat (ISO)

enzyme inhibitor (ISO)

fenthion (ISO)

flutamide (EXP)

folic acid (ISO)

fumonisin B1 (ISO)

gentamycin (EXP)

glafenine (EXP)

haloperidol (ISO)

heparin (EXP)

ivermectin (ISO)

L-methionine (ISO)

lead(0) (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methidathion (ISO)

methimazole (EXP)

methyl methanesulfonate (ISO)

N-methyl-4-phenylpyridinium (ISO)

N-nitrosodiethylamine (EXP,ISO)

N-nitrosodimethylamine (EXP)

nickel atom (ISO)

nicotine (ISO)

nimesulide (EXP)

ochratoxin A (ISO)

panobinostat (ISO)

paracetamol (EXP,ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

propiconazole (ISO)

quercetin (EXP)

resveratrol (ISO)

rotenone (EXP,ISO)

SB 431542 (ISO)

selenium atom (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

Soman (EXP)

sulfadimethoxine (EXP)

sulforaphane (ISO)

sunitinib (ISO)

tanespimycin (ISO)

tetrachloromethane (ISO)

thapsigargin (ISO)

thioacetamide (EXP)

trichostatin A (ISO)

triphenyl phosphate (EXP)

urethane (ISO)

valproic acid (ISO)

vancomycin (ISO)

vinclozolin (EXP)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin filament organization (IBA,IEA)

epithelial cell differentiation (IEA,ISO)

Cellular Component

actin cytoskeleton (IBA,IEA)

Molecular Function

actin filament binding (IBA,IEA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	GOA pipeline	RGD automated data pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:19056867	PMID:19190083	PMID:19199708	PMID:20458337	PMID:21492153	PMID:23376485	PMID:23533145	PMID:25468996

Genomics

Comparative Map Data

Tagln2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	87,499,350 - 87,506,328 (+)	NCBI		GRCr8
mRatBN7.2	13	84,966,980 - 84,973,973 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	84,967,009 - 84,973,972 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	87,470,400 - 87,477,325 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	88,870,673 - 88,877,596 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	86,055,413 - 86,062,336 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	90,807,196 - 90,814,119 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	90,807,199 - 90,814,119 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	95,407,077 - 95,414,000 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	88,505,258 - 88,512,178 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	88,694,141 - 88,701,062 (+)	NCBI
Celera	13	84,576,664 - 84,583,584 (+)	NCBI		Celera
Cytogenetic Map	13	q24	NCBI

TAGLN2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	159,918,111 - 159,925,507 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	159,918,107 - 159,925,507 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	159,887,901 - 159,895,297 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	158,154,527 - 158,161,908 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	156,700,975 - 156,708,357	NCBI
Celera	1	132,956,342 - 132,963,724 (-)	NCBI		Celera
Cytogenetic Map	1	q23.2	NCBI
HuRef	1	131,244,608 - 131,252,044 (-)	NCBI		HuRef
CHM1_1	1	161,283,227 - 161,290,660 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	159,055,181 - 159,062,575 (-)	NCBI		T2T-CHM13v2.0

Tagln2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	172,327,813 - 172,334,942 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	172,327,614 - 172,334,947 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	172,500,246 - 172,507,375 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	172,500,047 - 172,507,380 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	174,430,377 - 174,437,506 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	174,336,939 - 174,344,055 (+)	NCBI		MGSCv36	mm8
Celera	1	175,353,741 - 175,361,114 (+)	NCBI		Celera
Cytogenetic Map	1	H3	NCBI
cM Map	1	79.89	NCBI

Tagln2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955468	11,713,515 - 11,721,870 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955468	11,713,809 - 11,721,125 (-)	NCBI	ChiLan1.0	ChiLan1.0

TAGLN2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	89,928,580 - 89,936,071 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	89,668,597 - 89,676,095 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	135,269,954 - 135,277,421 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	139,190,519 - 139,197,953 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	139,190,519 - 139,197,953 (-)	Ensembl	panpan1.1		panPan2

TAGLN2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	38	22,224,223 - 22,230,292 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	38	22,225,133 - 22,229,766 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	38	22,302,122 - 22,308,156 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	38	22,347,244 - 22,353,299 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	38	22,347,277 - 22,352,817 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UNSW_CanFamBas_1.0	38	22,647,035 - 22,653,092 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	38	23,057,510 - 23,063,564 (+)	NCBI		UU_Cfam_GSD_1.0

Tagln2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	6,057,365 - 6,064,824 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936740	689,595 - 699,763 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936740	689,745 - 697,145 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TAGLN2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	4	90,566,272 - 90,574,762 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	98,615,640 - 98,623,934 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TAGLN2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	4,024,948 - 4,032,361 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	4,024,775 - 4,032,526 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	3,083,164 - 3,090,625 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tagln2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624794	1,331,075 - 1,338,445 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Tagln2
20 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	89
Count of miRNA genes:	71
Interacting mature miRNAs:	81
Transcripts:	ENSRNOT00000011208
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	1	101056920	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	1	101056920	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	1	101056920	Rat
1581570	Eae17	Experimental allergic encephalomyelitis QTL 17	4.1		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	13	8897350	101631289	Rat
7207885	Glom27	Glomerulus QTL 27	3.9		kidney glomerulus integrity trait (VT:0010546)	kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)	13	20605871	101339738	Rat
1354621	Rf47	Renal function QTL 47	3.7		kidney renin amount (VT:0010559)	kidney renin level (CMO:0002166)	13	30395351	101056920	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	31241331	93395974	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	31241331	93395974	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	31241331	93395974	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	13	31241331	93395974	Rat
12879444	Bp397	Blood pressure QTL 397			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	45049404	90049404	Rat
12879471	Bp398	Blood pressure QTL 398			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	45514719	90514719	Rat
12879441	Bp396	Blood pressure QTL 396			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	45699983	90699983	Rat
1298066	Bp159	Blood pressure QTL 159		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	46088046	91088046	Rat
1641901	Alcrsp6	Alcohol response QTL 6			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	13	52362171	97362171	Rat
1354655	Bp241	Blood pressure QTL 241	3.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	56056920	101056920	Rat
738026	Lnnr5	Liver neoplastic nodule remodeling QTL 5	3.29		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	13	59874408	85581182	Rat
12879475	Bp400	Blood pressure QTL 400			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	61825626	106807694	Rat
2293702	Bss34	Bone structure and strength QTL 34	4.61	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	13	65103704	106807694	Rat
2293687	Bss26	Bone structure and strength QTL 26	4.6	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	13	65103704	106807694	Rat
8655945	Rf61	Renal function QTL 61	3.6		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	13	69060519	86800898	Rat
1331783	Bp221	Blood pressure QTL 221	3.72886		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	69060519	86800898	Rat
1300166	Kidm6	Kidney mass QTL 6	3.93		kidney mass (VT:0002707)	single kidney wet weight to body weight ratio (CMO:0000622)	13	69060519	86800898	Rat
8655959	Pur32	Proteinuria QTL 32	8.4		urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	13	74023918	97213863	Rat
738027	Lnnr6	Liver neoplastic nodule remodeling QTL 6	3.3		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	13	74862117	85581182	Rat
2293341	Glom15	Glomerulus QTL 15	9.1		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	13	74862117	101339893	Rat
4889606	Gluco63	Glucose level QTL 63	2.86	0.003	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	13	80753256	106807694	Rat
1302791	Stl29	Serum triglyceride level QTL 29	3.3	0.0011	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	13	84730788	86800898	Rat

Markers in Region

RH133696

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	84,973,673 - 84,973,889 (-)	MAPPER	mRatBN7.2
Rnor_6.0	13	90,807,280 - 90,807,495	NCBI	Rnor6.0
Rnor_5.0	13	95,413,701 - 95,413,916	UniSTS	Rnor5.0
RGSC_v3.4	13	88,511,882 - 88,512,097	UniSTS	RGSC3.4
Celera	13	84,583,288 - 84,583,503	UniSTS
RH 3.4 Map	13	565.0	UniSTS
Cytogenetic Map	13	q24	UniSTS

AI103968

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	84,965,284 - 84,965,479 (-)	MAPPER	mRatBN7.2
Rnor_6.0	13	90,815,690 - 90,815,884	NCBI	Rnor6.0
Rnor_5.0	13	95,405,312 - 95,405,506	UniSTS	Rnor5.0
RGSC_v3.4	13	88,503,493 - 88,503,687	UniSTS	RGSC3.4
Celera	13	84,574,899 - 84,575,093	UniSTS
RH 3.4 Map	13	562.4	UniSTS
Cytogenetic Map	13	q24	UniSTS

AI013247

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	84,973,611 - 84,973,846 (-)	MAPPER	mRatBN7.2
Rnor_6.0	13	90,807,323 - 90,807,557	NCBI	Rnor6.0
Rnor_5.0	13	95,413,639 - 95,413,873	UniSTS	Rnor5.0
RGSC_v3.4	13	88,511,820 - 88,512,054	UniSTS	RGSC3.4
Celera	13	84,583,226 - 84,583,460	UniSTS
RH 3.4 Map	13	563.0	UniSTS
Cytogenetic Map	13	q24	UniSTS

AU049530

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	84,972,522 - 84,972,648 (-)	MAPPER	mRatBN7.2
Rnor_6.0	13	90,808,521 - 90,808,646	NCBI	Rnor6.0
Rnor_5.0	13	95,412,550 - 95,412,675	UniSTS	Rnor5.0
RGSC_v3.4	13	88,510,731 - 88,510,856	UniSTS	RGSC3.4
Celera	13	84,582,137 - 84,582,262	UniSTS
Cytogenetic Map	13	q24	UniSTS

Tagln2

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	84,971,776 - 84,972,365 (-)	MAPPER	mRatBN7.2
Rnor_6.0	13	90,808,804 - 90,809,392	NCBI	Rnor6.0
Rnor_5.0	13	95,411,804 - 95,412,392	UniSTS	Rnor5.0
RGSC_v3.4	13	88,509,985 - 88,510,573	UniSTS	RGSC3.4
Celera	13	84,581,391 - 84,581,979	UniSTS
Cytogenetic Map	13	q24	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High												3
Medium	3	43	57	41	19	41	8	11	74	35	40	8	8
Low											1
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001013127	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250295	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090801	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272375	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC112551	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC084703	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473985	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ223112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228757	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000011208 ⟹ ENSRNOP00000011208

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	84,967,035 - 84,973,969 (+)	Ensembl
Rnor_6.0 Ensembl	13	90,807,199 - 90,814,119 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000102023 ⟹ ENSRNOP00000081124

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	84,968,823 - 84,973,972 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000114693 ⟹ ENSRNOP00000080418

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	84,967,009 - 84,973,972 (+)	Ensembl

RefSeq Acc Id:

NM_001013127 ⟹ NP_001013145

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	87,499,408 - 87,506,328 (+)	NCBI
mRatBN7.2	13	84,967,050 - 84,973,970 (+)	NCBI
Rnor_6.0	13	90,807,199 - 90,814,119 (-)	NCBI
Rnor_5.0	13	95,407,077 - 95,414,000 (+)	NCBI
RGSC_v3.4	13	88,505,258 - 88,512,178 (+)	RGD
Celera	13	84,576,664 - 84,583,584 (+)	RGD

Sequence:

show sequence

GCCGTGTGTGCGCTCTCATCTAGCCGGCTTGGACGTTCTTCACCACTGTTCAGAATGGCCAACA
GGGGACCTTCGTATGGCCTGAGCCGAGAGGTGCAGCAGAAGATTGAGAAGCAGTACGACCCAGA
TCTGGAGCAGATCCTGATCCAGTGGATTACCACTCAGTGCCGGAAGGGTGTGAGCCAGCCCCAG
CCAGGGCGGGAGAACTTCCAGAACTGGCTCAAGGATGGCACGGTGCTGTGCGAGCTCATTAATT
CACTATATCCTGAGGGGCAGGCCCCAGTAAAGAAGATCCAGGCCTCTACGATGGCCTTCAAGCA
GATGGAGCAGATCTCTCAGTTCCTGCAAGCAGCCGAGCGTTATGGCATTAACACCACGGACATC
TTCCAGACTGTGGATCTCTGGGAAGGAAAGAACATGGCTTGTGTGCAGCGGACACTAATGAACC
TGGGTGGGCTGGCAGTAGCCAGGGACGATGGGCTCTTCTCTGGGGACCCCAACTGGTTTCCTAA
GAAATCCAAGGAGAACCCTCGGAACTTCTCGGACAACCAGTTGCAAGAGGGCAAGAATGTGATT
GGGTTACAGATGGGCACCAACCGTGGAGCCTCTCAGGCTGGCATGACTGGCTATGGGATGCCCA
GGCAGATCCTCTGATCAGACCCTCCTCTTCCCCTGCCCTCTATGAATGGTTAATATATATGTAT
ATATATGTTTTAGCAGACATTCCCTGAGAGCCCCTGGCTTGCTAAGCTCCCCTCTGCCAGGGTG
GGTCCAACCTATCTTGTTACCTCTGGCAGTGCCTGATAATTGCCTCTCTCTCTCTGTCTCTCTC
TCTCTCTCTCTGGGCTTACTAATGCATTCCTTCCCCCACAACCATCAAAACTGGACCAACAAAA
ACCCTGGGACCAAAGCCTCCTTCTTCCAGCATGTTTCTGCCTTCCTGACCTCTGTTTTTAGTCC
ATTCCTTGGCTAGGAGTCAGAGATCCTGCCCTGTGGCCCGGTGCTGAACTGACCCTTCCTTCTA
CAAGTAGGCCTCTCCCTCAGCTGTGGCTGCAGGCACTTCATTTATAGGGAGGGGCCTGTGGCTG
TCACTCCAGCCACAGCTGGACCATACTTACCACACATCCGGGCAGCTTCTCCTAGCAGAGGCCC
TTTGGCTTCTTACTTTCCATTCCTCTCACTTGTGGCTAAGGGGTGGAGTGGAGGAGACAGAGGT
AAAAGAGCTGCCCACCGTGGTCTGGGGCTTGAGGAACATGAGTTTGCTGATTTTAAGTAATAAA
AAATCTCATTCTCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006250295 ⟹ XP_006250357

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	87,499,390 - 87,506,324 (+)	NCBI
mRatBN7.2	13	84,967,188 - 84,973,973 (+)	NCBI
Rnor_6.0	13	90,807,196 - 90,814,009 (-)	NCBI
Rnor_5.0	13	95,407,077 - 95,414,000 (+)	NCBI

Sequence:

show sequence

GCGAACACTTGAGACTTGCTTTAGGGAGCCTGGGGGTTGAAGATCACAAGGGTCCGAACTGGGT
GCCCCGCCCCGTGCTGTCAGGTCCGGTTCCCAGGACATCTTTGCATTGTTCAACAATTAAGTAA
GGCAAGCTTTACGGGCGCACAGACGGGGCGTCCATCCCGACCCAAAAAGGTCGGGTTCAAAGCC
CCAGCAGTTCGCTCCAGCGTCGAGTTCTCCTTAAAGGAGAAGGAACGAGGGCGTCGGACGTCCG
CAGGCTGCTGAGTGGCCGCAAGAACTGGGTTCTGGCGCGCGCCCCGGTGCGTCTCCGCGGTCCC
TGAACTTACCGCGCGACCCATTCACTTCCTGGTCCAGGAGCACGTGTGGGCACTGCCTGCCTTC
TGTGACCCCGAGACCGCCCTTTTGGTCCCCTCCTGCTAGTTCGTTGTCTGGGTACTCGGGGTCA
CCAGCTGGGGTCACGGCTCTCGTTCTTCACCACTGTTCAGAATGGCCAACAGGGGACCTTCGTA
TGGCCTGAGCCGAGAGGTGCAGCAGAAGATTGAGAAGCAGTACGACCCAGATCTGGAGCAGATC
CTGATCCAGTGGATTACCACTCAGTGCCGGAAGGGTGTGAGCCAGCCCCAGCCAGGGCGGGAGA
ACTTCCAGAACTGGCTCAAGGATGGCACGGTGCTGTGCGAGCTCATTAATTCACTATATCCTGA
GGGGCAGGCCCCAGTAAAGAAGATCCAGGCCTCTACGATGGCCTTCAAGCAGATGGAGCAGATC
TCTCAGTTCCTGCAAGCAGCCGAGCGTTATGGCATTAACACCACGGACATCTTCCAGACTGTGG
ATCTCTGGGAAGGAAAGAACATGGCTTGTGTGCAGCGGACACTAATGAACCTGGGTGGGCTGGC
AGTAGCCAGGGACGATGGGCTCTTCTCTGGGGACCCCAACTGGTTTCCTAAGAAATCCAAGGAG
AACCCTCGGAACTTCTCGGACAACCAGTTGCAAGAGGGCAAGAATGTGATTGGGTTACAGATGG
GCACCAACCGTGGAGCCTCTCAGGCTGGCATGACTGGCTATGGGATGCCCAGGCAGATCCTCTG
ATCAGACCCTCCTCTTCCCCTGCCCTCTATGAATGGTTAATATATATGTATATATATGTTTTAG
CAGACATTCCCTGAGAGCCCCTGGCTTGCTAAGCTCCCCTCTGCCAGGGTGGGTCCAACCTATC
TTGTTACCTCTGGCAGTGCCTGATAATTGCCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTGG
GCTTACTAATGCATTCCTTCCCCCACAACCATCAAAACTGGACCAACAAAAACCCTGGGACCAA
AGCCTCCTTCTTCCAGCATGTTTCTGCCTTCCTGACCTCTGTTTTTAGTCCATTCCTTGGCTAG
GAGTCAGAGATCCTGCCCTGTGGCCCGGTGCTGAACTGACCCTTCCTTCTACAAGTAGGCCTCT
CCCTCAGCTGTGGCTGCAGGCACTTCATTTATAGGGAGGGGCCTGTGGCTGTCACTCCAGCCAC
AGCTGGACCATACTTACCACACATCCGGGCAGCTTCTCCTAGCAGAGGCCCTTTGGCTTCTTAC
TTTCCATTCCTCTCACTTGTGGCTAAGGGGTGGAGTGGAGGAGACAGAGGTAAAAGAGCTGCCC
ACCGTGGTCTGGGGCTTGAGGAACATGAGTTTGCTGATTTTAAGTAATAAAAAATCTCATTCTC
TTTTGGA

hide sequence

RefSeq Acc Id:

XM_039090801 ⟹ XP_038946729

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	87,499,350 - 87,506,324 (+)	NCBI
mRatBN7.2	13	84,966,980 - 84,973,973 (+)	NCBI

RefSeq Acc Id:

XM_063272375 ⟹ XP_063128445

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	87,501,176 - 87,506,324 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001013145	(Get FASTA)	NCBI Sequence Viewer
	XP_006250357	(Get FASTA)	NCBI Sequence Viewer
	XP_038946729	(Get FASTA)	NCBI Sequence Viewer
	XP_063128445	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH84703	(Get FASTA)	NCBI Sequence Viewer
	EDL94716	(Get FASTA)	NCBI Sequence Viewer
	EDL94717	(Get FASTA)	NCBI Sequence Viewer
	EDL94718	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000011208
	ENSRNOP00000011208.4
	ENSRNOP00000080418.1
	ENSRNOP00000081124.1
	ENSRNOP00055030832
	ENSRNOP00060034505
	ENSRNOP00065030282
GenBank Protein	Q5XFX0	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001013145 ⟸ NM_001013127

- UniProtKB:

Q5XFX0 (UniProtKB/Swiss-Prot), A6JG61 (UniProtKB/TrEMBL), A0A8I5ZRB4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MANRGPSYGLSREVQQKIEKQYDPDLEQILIQWITTQCRKGVSQPQPGRENFQNWLKDGTVLCE
LINSLYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGKNMACVQRT
LMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNVIGLQMGTNRGASQAGMTGY
GMPRQIL

hide sequence

RefSeq Acc Id:	XP_006250357 ⟸ XM_006250295
- Peptide Label:	isoform X1
- UniProtKB:	Q5XFX0 (UniProtKB/Swiss-Prot), A6JG61 (UniProtKB/TrEMBL), A0A8I5ZRB4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MANRGPSYGLSREVQQKIEKQYDPDLEQILIQWITTQCRKGVSQPQPGRENFQNWLKDGTVLCE LINSLYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGKNMACVQRT LMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNVIGLQMGTNRGASQAGMTGY GMPRQIL hide sequence

RefSeq Acc Id:

ENSRNOP00000011208 ⟸ ENSRNOT00000011208

RefSeq Acc Id:	XP_038946729 ⟸ XM_039090801
- Peptide Label:	isoform X1
- UniProtKB:	Q5XFX0 (UniProtKB/Swiss-Prot), A6JG61 (UniProtKB/TrEMBL), A0A8I5ZRB4 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSRNOP00000080418 ⟸ ENSRNOT00000114693

RefSeq Acc Id:

ENSRNOP00000081124 ⟸ ENSRNOT00000102023

RefSeq Acc Id:	XP_063128445 ⟸ XM_063272375
- Peptide Label:	isoform X1
- UniProtKB:	Q5XFX0 (UniProtKB/Swiss-Prot), A6JG61 (UniProtKB/TrEMBL)

Protein Domains

Calponin-homology (CH)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5XFX0-F1-model_v2	AlphaFold	Q5XFX0	1-199	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13699026

Promoter ID:

EPDNEW_R9551

Type:

multiple initiation site

Name:

Tagln2_1

Description:

transgelin 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	13	90,814,138 - 90,814,198	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310840	AgrOrtholog
BioCyc Gene	G2FUF-17311	BioCyc
Ensembl Genes	ENSRNOG00000008301	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSRNOG00055022002	UniProtKB/Swiss-Prot
	ENSRNOG00060023997	UniProtKB/Swiss-Prot
	ENSRNOG00065021989	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000011208.8	UniProtKB/Swiss-Prot
	ENSRNOT00000102023.1	UniProtKB/TrEMBL
	ENSRNOT00000114693.1	UniProtKB/TrEMBL
	ENSRNOT00055037790	UniProtKB/Swiss-Prot
	ENSRNOT00060041637	UniProtKB/Swiss-Prot
	ENSRNOT00065037490	UniProtKB/Swiss-Prot
Gene3D-CATH	1.10.418.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7300611	IMAGE-MGC_LOAD
InterPro	Calponin_repeat	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CH-domain	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CH_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SM22_calponin	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:304983	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE	MGC:105912	IMAGE-MGC_LOAD
NCBI Gene	304983	ENTREZGENE
PANTHER	CALPONIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TRANSGELIN-2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Calponin	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PF00307	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Tagln2	PhenoGen
PRINTS	SM22CALPONIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TRANSGELIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	CALPONIN_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CALPONIN_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PS50021	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000008301	RatGTEx
	ENSRNOG00055022002	RatGTEx
	ENSRNOG00060023997	RatGTEx
	ENSRNOG00065021989	RatGTEx
SMART	SM00033	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF47576	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8I5ZQ04_RAT	UniProtKB/TrEMBL
	A0A8I5ZRB4	ENTREZGENE, UniProtKB/TrEMBL
	A6JG60_RAT	UniProtKB/TrEMBL
	A6JG61	ENTREZGENE, UniProtKB/TrEMBL
	Q5XFX0	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-12-06	Tagln2	transgelin 2	Tagln2_predicted	transgelin 2 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Tagln2_predicted	transgelin 2 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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