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Gene: Agap3 (ArfGAP with GTPase domain, ankyrin repeat and PH domain 3) Rattus norvegicus

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Symbol:

Agap3

Name:

ArfGAP with GTPase domain, ankyrin repeat and PH domain 3

RGD ID:

1310751

Description:

Predicted to enable GTPase activator activity; GTPase activity; and polyubiquitin modification-dependent protein binding activity. Involved in regulation of postsynaptic membrane neurotransmitter receptor levels. Is active in glutamatergic synapse and postsynaptic density. Orthologous to human AGAP3 (ArfGAP with GTPase domain, ankyrin repeat and PH domain 3); PARTICIPATES IN endocytosis pathway; INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3; centaurin, gamma 3; Centg3; LOC362300

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	11,567,191 - 11,617,610 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	11,567,191 - 11,617,285 (-)	Ensembl				GRCr8
mRatBN7.2	4	10,674,746 - 10,724,848 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	10,674,064 - 10,725,244 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	15,820,842 - 15,871,089 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	11,641,034 - 11,691,279 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	9,992,816 - 10,043,063 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	7,202,330 - 7,253,386 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	7,202,330 - 7,253,072 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	7,213,697 - 7,264,499 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	6,038,279 - 6,064,813 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	6,288,813 - 6,315,118 (-)	NCBI		Celera
RGSC_v3.1	4	6,039,389 - 6,093,727 (-)	NCBI
Cytogenetic Map	4	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (EXP,ISO)

1,4-dichlorobenzene (ISO)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

5-fluorouracil (ISO)

6-propyl-2-thiouracil (EXP)

all-trans-retinoic acid (ISO)

amitrole (EXP)

antirheumatic drug (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

C60 fullerene (EXP)

cadmium atom (EXP,ISO)

cadmium dichloride (EXP,ISO)

calcitriol (ISO)

carbon nanotube (ISO)

chlorpyrifos (ISO)

clofibrate (ISO)

crocidolite asbestos (ISO)

decabromodiphenyl ether (EXP)

dibutyl phthalate (EXP)

epoxiconazole (ISO)

ethanol (ISO)

fenthion (ISO)

FR900359 (ISO)

gallic acid (ISO)

kojic acid (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methimazole (EXP)

paracetamol (ISO)

perfluorohexanesulfonic acid (ISO)

phenytoin (EXP)

progesterone (ISO)

rotenone (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to reactive oxygen species (ISO)

proteasome-mediated ubiquitin-dependent protein catabolic process (IBA,ISO)

protein import into nucleus (ISO)

regulation of postsynaptic membrane neurotransmitter receptor levels (IDA,IMP)

Cellular Component

cell periphery (ISO)

cytoplasm (IBA,IEA,ISO)

glutamatergic synapse (IDA,IEP,IMP)

neuron projection (IEA)

nucleus (IBA,ISO)

postsynaptic density (IDA,IEP)

Molecular Function

GTP binding (IEA)

GTPase activator activity (IBA,IEA)

GTPase activity (IBA,IEA,ISO)

metal ion binding (IEA)

nucleotide binding (IEA)

polyubiquitin modification-dependent protein binding (ISO)

zinc ion binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

endocytosis pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	AGAP3 and Arf6 regulate trafficking of AMPA receptors and synaptic plasticity.	Oku Y and Huganir RL, J Neurosci. 2013 Jul 31;33(31):12586-98. doi: 10.1523/JNEUROSCI.0341-13.2013.
4.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
5.	GOA pipeline	RGD automated data pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:16461359	PMID:37749596

Genomics

Comparative Map Data

Agap3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	11,567,191 - 11,617,610 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	11,567,191 - 11,617,285 (-)	Ensembl				GRCr8
mRatBN7.2	4	10,674,746 - 10,724,848 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	10,674,064 - 10,725,244 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	15,820,842 - 15,871,089 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	11,641,034 - 11,691,279 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	9,992,816 - 10,043,063 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	7,202,330 - 7,253,386 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	7,202,330 - 7,253,072 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	7,213,697 - 7,264,499 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	6,038,279 - 6,064,813 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	6,288,813 - 6,315,118 (-)	NCBI		Celera
RGSC_v3.1	4	6,039,389 - 6,093,727 (-)	NCBI
Cytogenetic Map	4	q11	NCBI

AGAP3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	151,085,867 - 151,144,434 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	151,085,831 - 151,144,436 (+)	Ensembl			hg38	GRCh38
GRCh37	7	150,782,954 - 150,841,521 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	150,414,759 - 150,472,456 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	7	150,221,473 - 150,279,171	NCBI
Celera	7	145,341,154 - 145,398,859 (+)	NCBI		Celera
Cytogenetic Map	7	q36.1	NCBI
HuRef	7	144,594,965 - 144,653,057 (+)	NCBI		HuRef
CHM1_1	7	150,791,315 - 150,849,895 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	152,258,976 - 152,317,511 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	150,112,452 - 150,171,043 (+)	NCBI

Agap3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	24,657,175 - 24,707,045 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	24,657,175 - 24,707,045 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	5	24,452,177 - 24,502,047 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	24,452,177 - 24,502,047 (+)	Ensembl			mm10	GRCm38
MGSCv37	5	23,957,995 - 24,007,865 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	5	23,962,242 - 24,012,112 (+)	NCBI		MGSCv36	mm8
Celera	5	21,394,522 - 21,452,021 (+)	NCBI		Celera
Cytogenetic Map	5	A3	NCBI
cM Map	5	11.81	NCBI

Agap3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955491	5,523,969 - 5,573,387 (+)	Ensembl
ChiLan1.0	NW_004955491	5,546,097 - 5,573,866 (+)	NCBI	ChiLan1.0	ChiLan1.0

AGAP3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	187,507,834 - 187,566,328 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	39,518,132 - 39,576,595 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	142,672,773 - 142,731,261 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	154,825,594 - 154,884,340 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	154,822,312 - 154,884,339 (+)	Ensembl			panPan2	panpan1.1

AGAP3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	15,163,705 - 15,193,053 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	15,137,024 - 15,193,538 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	15,744,734 - 15,801,147 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	16,858,855 - 16,915,349 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	16,858,468 - 16,915,324 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	16	15,231,701 - 15,287,508 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	15,813,103 - 15,868,934 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	15,863,297 - 15,919,795 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Agap3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	6,339,801 - 6,393,200 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936527	6,510,223 - 6,563,154 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936527	6,510,223 - 6,563,656 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AGAP3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	6,081,681 - 6,145,522 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	18	6,081,680 - 6,145,115 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	6,445,525 - 6,502,093 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AGAP3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	119,268,918 - 119,327,623 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666072	15,239,703 - 15,298,444 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Agap3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624800	5,487,200 - 5,535,707 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624800	5,486,728 - 5,535,691 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Agap3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	6	153,647,685 - 153,698,261 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Agap3
259 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	200
Count of miRNA genes:	131
Interacting mature miRNAs:	155
Transcripts:	ENSRNOT00000064386
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
8552903	Pigfal2	Plasma insulin-like growth factor 1 level QTL 2	7.3		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	4	1	32668025	Rat
724557	Plsm1	Polydactyly-luxate syndrome (PLS) morphotypes QTL 1		0.0003	forelimb integrity trait (VT:0010562)	front foot phalanges count (CMO:0001947)	4	1	28392287	Rat
9590100	Sffal4	Serum free fatty acids level QTL 4	7.36	0.05	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	4	1	32668025	Rat
8552906	Pigfal3	Plasma insulin-like growth factor 1 level QTL 3			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	4	11038706	56038706	Rat
1357341	Gluco5	Glucose level QTL 5	6.4		adipocyte free fatty acid secretion trait (VT:0010465)	absolute change in adipocyte free fatty acid secretion per unit volume (CMO:0001446)	4	1	34142783	Rat
1357343	Gluco4	Glucose level QTL 4		0.00002	adipocyte glucose uptake trait (VT:0004185)	adipocyte maximal glucose uptake to basal glucose uptake ratio (CMO:0000874)	4	1	34142783	Rat
8552782	Vie1	Viral induced encephalitis QTL 1	26.4		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	4	1	35396961	Rat
6478766	Anxrr47	Anxiety related response QTL 47		0.09637	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	4	11038706	56038706	Rat
631642	Stl2	Serum triglyceride level QTL 2	3.3		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	4	5894575	57613242	Rat
6478769	Anxrr48	Anxiety related response QTL 48		0.02514	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	11038706	56038706	Rat
61333	Gluco16	Glucose level QTL 16	4.3	0.00001	adipocyte glucose uptake trait (VT:0004185)	absolute change in adipocyte glucose uptake (CMO:0000873)	4	1	31106810	Rat
61408	Scl23	Serum cholesterol level QTL 23		0.0005	blood HDL phospholipid amount (VT:0010504)	serum high density lipoprotein phospholipid level (CMO:0001567)	4	1	28392287	Rat
631209	Bw2	Body weight QTL2	4.2		retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	4	1	45429897	Rat
8552803	Bw144	Body weight QTL 144	16		body mass (VT:0001259)	change in body weight to body weight ratio (CMO:0002216)	4	1	35396961	Rat
8694374	Bw155	Body weight QTL 155	3.39	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	4	11038706	56038706	Rat
8552801	Bw143	Body weight QTL 143	7.3		body mass (VT:0001259)	change in body weight to body weight ratio (CMO:0002216)	4	1	35396961	Rat
2303168	Bp330	Blood pressure QTL 330	4.25	0.017	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	5889999	148002343	Rat
9589046	Scfw2	Subcutaneous fat weight QTL 2	5.54	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	4	1	32668025	Rat
6478724	Anxrr35	Anxiety related response QTL 35		0.00449	defecation behavior trait (VT:0010462)	defecation measurement (CMO:0000997)	4	11038706	56038706	Rat
61351	Bp33	Blood pressure QTL 33		0.0018	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	1	28392287	Rat
61415	Eae11	Experimental allergic encephalomyelitis QTL 11	2.9		nervous system integrity trait (VT:0010566)	post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)	4	1	40471598	Rat
1641905	Colcr1	Colorectal carcinoma resistance QTL 1	4.3	0.0003	intestine integrity trait (VT:0010554)	benign colorectal tumor surface area measurement (CMO:0001799)	4	8428551	30449094	Rat
619616	Bp79	Blood pressure QTL 79		0.0292	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	5889999	50889999	Rat
8552809	Vie5	Viral induced encephalitis QTL 5	25.3		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	4	1	35396961	Rat
738021	Hcar13	Hepatocarcinoma resistance QTL 13	4.3		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)	4	1	33538816	Rat
70192	BpQTLcluster5	Blood pressure QTL cluster 5	4.183		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	4	1	63900697	Rat
9590304	Scort17	Serum corticosterone level QTL 17	4.96	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	11038706	56038706	Rat
9589097	Slep11	Serum leptin concentration QTL 11	5.09	0.001	blood leptin amount (VT:0005667)	plasma leptin level (CMO:0000781)	4	1	32668025	Rat
1300141	Bp178	Blood pressure QTL 178			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	10758701	40490708	Rat

Markers in Region

D4Got15

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	4	11,568,234 - 11,568,375 (+)	Marker Load Pipeline
mRatBN7.2	4	10,675,789 - 10,675,932 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	7,204,056 - 7,204,196	NCBI	Rnor6.0
Rnor_5.0	4	7,215,423 - 7,215,563	UniSTS	Rnor5.0
RGSC_v3.4	4	6,040,004 - 6,040,145	RGD	RGSC3.4
RGSC_v3.4	4	6,040,005 - 6,040,145	UniSTS	RGSC3.4
Celera	4	6,290,539 - 6,290,683	UniSTS
RGSC_v3.1	4	6,040,004 - 6,040,145	RGD
RH 2.0 Map	4	0.0	RGD
Cytogenetic Map	4	q11	UniSTS

AV028425

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	10,694,144 - 10,694,229 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	7,222,405 - 7,222,489	NCBI	Rnor6.0
Rnor_5.0	4	7,233,769 - 7,233,853	UniSTS	Rnor5.0
RGSC_v3.4	4	6,058,355 - 6,058,439	UniSTS	RGSC3.4
Celera	4	6,308,860 - 6,308,944	UniSTS
Cytogenetic Map	4	q11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	92	59	6	356	192	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001398853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235938	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235939	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235940	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235941	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235943	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762650	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107748	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107749	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107750	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286226	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC099360	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC158716	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KF447874	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000064386 ⟹ ENSRNOP00000063846

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	11,586,367 - 11,595,754 (-)	Ensembl
mRatBN7.2 Ensembl	4	10,674,064 - 10,725,138 (-)	Ensembl
Rnor_6.0 Ensembl	4	7,202,330 - 7,228,675 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000084777 ⟹ ENSRNOP00000072199

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	11,567,191 - 11,617,285 (-)	Ensembl
mRatBN7.2 Ensembl	4	10,674,064 - 10,725,244 (-)	Ensembl
Rnor_6.0 Ensembl	4	7,203,003 - 7,252,950 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000087120 ⟹ ENSRNOP00000070947

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	11,567,191 - 11,617,285 (-)	Ensembl
mRatBN7.2 Ensembl	4	10,674,746 - 10,725,244 (-)	Ensembl
Rnor_6.0 Ensembl	4	7,203,441 - 7,253,072 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097225 ⟹ ENSRNOP00000077364

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	11,567,191 - 11,617,285 (-)	Ensembl
mRatBN7.2 Ensembl	4	10,674,064 - 10,725,138 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000171340 ⟹ ENSRNOP00000100965

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	11,589,230 - 11,617,285 (-)	Ensembl

RefSeq Acc Id:

NM_001398853 ⟹ NP_001385782

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	11,567,191 - 11,617,285 (-)	NCBI
mRatBN7.2	4	10,674,746 - 10,724,848 (-)	NCBI

RefSeq Acc Id:

XM_006235938 ⟹ XP_006236000

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	11,567,197 - 11,595,811 (-)	NCBI
mRatBN7.2	4	10,674,750 - 10,707,703 (-)	NCBI
Rnor_6.0	4	7,203,016 - 7,231,453 (-)	NCBI
Rnor_5.0	4	7,213,697 - 7,264,499 (-)	NCBI

Sequence:

show sequence

CCCCGGCCGCGGCCCCGGCCCGGGTCCAGCCCCGCGTCCCTCGCCATGGGCCTGGCCTTCGCCT
GTGGGCCCTGAGCATGGAGCGGGGCTGGCCGCCCGGGGCAAGCTGCAGCGGGGAGCGGCCGGCC
GTCTGCCGCCGCGCCCTCAGCGTCTGCGACTCGCTGGACCTGCACAGCACCTCGGCCGACCGGA
CCGCCGCCGCCCTGCAGGCCGCCTTGTGCACCGCGCACGAACAGCCTGCGCGGCCACGGAGCGT
GTGCTCCGGGACTCCGGGGTCGGCGCCCTCTGGTGCGCGCGGCCTACTACTCGGCCTCTTGCGC
CCGCGCCACGGCCGTCGGGGCCCTGCGCCCTCAGAACGGCCCGGCTCACCGCCGCCCAGTCCTG
AGCTCAGCCCCGCGCCTACCTGGCGCAGCCGCGGTCCTGGAGAGAGGGCATCCAGGCCGCGGCC
CACCAGCATGACGTTCCTGGAGGTGAACCGTCTAGAGCTGGCGGCTACGGAGGCGCCGGGCACA
GGGCTTGGACGCACGGGAAGTTCGGGCTTCCTGCGAGGAGCGTCGCTGTGGAGTAGCCAGCGCT
GGCAGGTGTTCCGTGGTGGTGGCAGCGGCCGCGGCGCAGAGAGTCCCCGGCGCGGGCTGTCCGC
GCTCAGGAAGAGCTTTAGCTTCCGTCTGCGCCGCGGCCAGGAGATCCGGCGCTCCGAATCCGGG
CTTCTTGCCCGGCCACCCCGCACGCGTACCCGCAGCGACGGCGACGCCAGCTCCCTGGGTACCT
TCCCCAGTCGCCGAGACTTGCTGGGCACCGATACCCCGTGCCCGCCACCGGAGCCTGGCCGCCC
CCGCGCCGCCGCCAGCCTCTGGAAGCTGCTCACCAGCCGCTTCCGCCGGAGGGAGCCCGCGCCC
GCAGCGCCGCTGTGGAGCCGCCGGGCAGCCCCAGCCCCAGGATTCCTGGGCGCGCACAGCGACT
CATTTGTGAACAGCCAGGAGTGGACCCTGAGCCGCTCTGTGCCGGAGCTTAAAGTGGGCATAGT
GGGGAACCTGTCTAGTGGGAAATCCGCCTTGGTTCACCGGTATCTGACAGGGACCTACGTCCAG
GAAGAATCCCCTGAAGGGGGTCGGTTTAAAAAGGAGATTGTGGTGGATGGCCAGAGTTACCTGC
TGCTGATCCGAGATGAAGGAGGCCCCCCTGAGCTCCAGTTTGCTGCCTGGGTGGATGCGGTGGT
GTTTGTGTTCAGCCTGGAGGATGAAATCAGCTTCCAGACAGTGTACAACTACTTCCTGCGCCTC
TGCAGCTTCCGGAATGCCAGCGAGGTGCCCATGGTGCTGGTGGGCACGCAGGATGCTATCAGTG
CTGCCAATCCCCGGGTCATTGATGACAGCAGGGCCCGCAAGCTGTCCACAGACCTGAAGCGCTG
TACCTACTATGAGACATGCGCAACCTATGGGCTCAATGTGGAGCGAGTCTTCCAGGACGTGGCC
CAGAAAGTGGTAGCCTTGCGGAAGAAGCAGCAGCTGGCCATCGGGCCCTGCAAGTCCCTGCCCA
ACTCACCCAGCCACTCGGCCGTGTCTGCTGCCTCCATCCCAGCTGTGCACATCAATCAGGCCAC
GAACGGCGGCGGCAGCGCCTTCAGCGACTACTCCTCCTCAGTCCCCTCCACCCCTAGCATCAGT
CAGCGGGAGCTGCGCATCGAGACCATCGCTGCCTCTTCCACCCCCACACCCATCCGCAAGCAGT
CCAAGCGGCGCTCTAACATCTTCACGTCTCGAAAAGGTGCTGACCCGGACAGGGAGAAGAAAGC
TGCGGAGTGTAAAGTGGACAGCATTGGGAGCGGCCGGGCCATCCCTATCAAGCAGGGGATCCTG
CTGAAAAGGAGCGGCAAATCCTTGAACAAGGAGTGGAAAAAGAAGTATGTGACACTGTGTGACA
ACGGGCTGCTTACTTACCACCCCAGCCTGCACGATTACATGCAGAACATCCACGGCAAAGAGAT
CGACCTCCTGCGGACCACAGTCAAAGTGCCAGGGAAGCGCCTGCCCCGAGCCACTCCCTCCACA
GCTCCGGGCACCAGTCCCCGTGGTGCCAACGGGTTGGCCCTGGAGCGGAGTAACACACAGCTGG
GTGGTACCACAGGTCGCCCCCACTCGGCCAGCAGTGCATCCCTGCATTCTGAGCGCCCTCACCG
CTCAGCCTGGGCTGGCTCACGCCCTGAGGGGTTGCACCAGCGCTCCTGTTCCATTTCCAGCACT
GACCAGTGGAGTGCGGCAGCTGCCCTGCCTGCCAGCGTGCAGCGTCCTGCCAGTGGCCCAGCTG
AGTTACTCAGTTCCAGCCCCAAGCTGGAGCCTCCCCCATCTCCCCGCTCCAACCGGAAGAAGCA
GCGCCGGAAAAAGAGCACCGGGACCCCCAGACCAGATGGCCCCAACAGTGCTGCTGAAGAGACA
GAGGAGTCCTTTGAATTTGTGGTGGTGTCCCTCACTGGTCAGACCTGGCACTTCGAGGCCTCAA
CAGCGGAAGAGCGGGAGCTGTGGGTGCAGAGCGTACAGGCCCAAATCCTCGCCAGCCTCCAGGG
ATGTCGCAGCGCCAAGGACAAGACCCGGCTGGGGAACCAGAGCACAGCCCTGGCTGTGCAGACT
GTCCGCACAGCCCGTGGCAATAGCTTCTGTGTTGACTGCGAAGCTCCCAATCCAGACTGGGCCA
GCCTGAATCTGGGTGCCCTGATGTGTATCGAGTGTTCAGGGATCCACCGACACCTGGGAGCTCA
CCTGTCCCGAGTCCGCTCCCTGGACCTTGATGACTGGCCACCCGAACTGCTAGCTGTCATGACC
GCAATGGGCAATGCCTTGGCTAACAGTGTCTGGGAGGGGGCTCTGGATGGCTACTCGAAGCCAG
GCCCAGAAGCCTGCAGAGAGGAGAAGGAACGCTGGATCCGGGCCAAGTATGAACAGAAGCTCTT
CCTGGCCCCACTGCCGAGCTCGGATGTGCCTCTGGGGCAGCAGTTACTCCGGGCCGTGGTGGAG
GATGACCTACGACTGCTGGTGATGCTGCTGGCCCATGGGTCCAAGGAGGAGGTGAACGAGACCT
ACGGGGATGGCGATGGCAGGACAGCCCTGCACCTGTCCAGTGCCATGGCCAACGTCGTTTTCAC
ACAGCTGCTCATCTGGTACGGGGTGGACGTGAGGAGCCGTGATGCCCGAGGCCTGACCCCACTG
GCCTATGCCCGCCGTGCCGGCAGCCAGGAGTGTGCAGACATCTTGATCCAGCATGGGTGCCCCG
GGGAGGGCTGTGGGTTAGCACCCACTCCCAACAGAGAGCCTGCCAACGGCACCAACCCTTCTGC
AGAACTGCACCGCAGCCCTAGTATCCTATGAAGCTCAGGAAGAGGCCAGAGGGACCAGAAGGAC
TCCACAGCCTGGAGGGGACATGGCGAAGCAGGGGTGCAGAGAAGAGGGGTGACGAGGGCGCAGG
GATGAAGAGGTCTGTGATTAAGCTGCAGCAGAGCAGGGTCTGTCATTCAGCCCTCTGCCCTGTG
GTGCCATTAAAGGACAGAACCCTTTGGAGGTGCCTGTGAGGAGAGGGGGGCAGGACCTCTCCCT
CCTCCAGAACCCTGCCTCCTCAGGACACCTCCCACAGTCCTCCCTGCAGTGGACAGGGACACAG
GACATAAGATGGGGTACCAGATGAAAGAAAGACAAGGGGCCGATCTGTGAGTCCCATGTAAAAC
TTGTACATTGGAATATTTATGTTCGTGTATATACGTGGTGTGTGAGCCAATAAACCAGGCTGTA
TGTGTGGC

hide sequence

RefSeq Acc Id:

XM_006235939 ⟹ XP_006236001

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	11,567,197 - 11,595,748 (-)	NCBI
mRatBN7.2	4	10,674,755 - 10,707,699 (-)	NCBI
Rnor_6.0	4	7,203,016 - 7,231,452 (-)	NCBI
Rnor_5.0	4	7,213,697 - 7,264,499 (-)	NCBI

Sequence:

show sequence

CCCGGCCGCGGCCCCGGCCCGGGTCCAGCCCCGCGTCCCTCGCCATGGGCCTGGCCTTCGCCTG
TGGGCCCTGAGCATGGAGCGGGGCTGGCCGCCCGGGGCAAGCTGCAGCGGGGAGCGGCCGGCCG
TCTGCCGCCGCGCCCTCAGCGTCTGCGACTCGCTGGACCTGCACAGCACCTCGGCCGACCGGAC
CGCCGCCGCCCTGCAGGCCGCCTTGTGCACCGCGCACGAACAGCCTGCGCGGCCACGGAGCGTG
TGCTCCGGGACTCCGGGGTCGGCGCCCTCTGGTGCGCGCGGCCTACTACTCGGCCTCTTGCGCC
CGCGCCACGGCCGTCGGGGCCCTGCGCCCTCAGAACGGCCCGGCTCACCGCCGCCCAGTCCTGA
GCTCAGCCCCGCGCCTACCTGGCGCAGCCGCGGTCCTGGAGAGAGGGCATCCAGGCCGCGGCCC
ACCAGCATGACGTTCCTGGAGGTGAACCGTCTAGAGCTGGCGGCTACGGAGGCGCCGGGCACAG
GGCTTGGACGCACGGGAAGTTCGGGCTTCCTGCGAGGAGCGTCGCTGTGGAGTAGCCAGCGCTG
GCAGGTGTTCCGTGGTGGTGGCAGCGGCCGCGGCGCAGAGAGTCCCCGGCGCGGGCTGTCCGCG
CTCAGGAAGAGCTTTAGCTTCCGTCTGCGCCGCGGCCAGGAGATCCGGCGCTCCGAATCCGGGC
TTCTTGCCCGGCCACCCCGCACGCGTACCCGCAGCGACGGCGACGCCAGCTCCCTGGGTACCTT
CCCCAGTCGCCGAGACTTGCTGGGCACCGATACCCCGTGCCCGCCACCGGAGCCTGGCCGCCCC
CGCGCCGCCGCCAGCCTCTGGAAGCTGCTCACCAGCCGCTTCCGCCGGAGGGAGCCCGCGCCCG
CAGCGCCGCTGTGGAGCCGCCGGGCAGCCCCAGCCCCAGGATTCCTGGGCGCGCACAGCGACTC
ATTTGTGAACAGCCAGGAGTGGACCCTGAGCCGCTCTGTGCCGGAGCTTAAAGTGGGCATAGTG
GGGAACCTGTCTAGTGGGAAATCCGCCTTGGTTCACCGGTATCTGACAGGGACCTACGTCCAGG
AAGAATCCCCTGAAGGGGGTCGGTTTAAAAAGGAGATTGTGGTGGATGGCCAGAGTTACCTGCT
GCTGATCCGAGATGAAGGAGGCCCCCCTGAGCTCCAGTTTGCTGCCTGGGTGGATGCGGTGGTG
TTTGTGTTCAGCCTGGAGGATGAAATCAGCTTCCAGACAGTGTACAACTACTTCCTGCGCCTCT
GCAGCTTCCGGAATGCCAGCGAGGTGCCCATGGTGCTGGTGGGCACGCAGGATGCTATCAGTGC
TGCCAATCCCCGGGTCATTGATGACAGCAGGGCCCGCAAGCTGTCCACAGACCTGAAGCGCTGT
ACCTACTATGAGACATGCGCAACCTATGGGCTCAATGTGGAGCGAGTCTTCCAGGACGTGGCCC
AGAAAGTGGTAGCCTTGCGGAAGAAGCAGCAGCTGGCCATCGGGCCCTGCAAGTCCCTGCCCAA
CTCACCCAGCCACTCGGCCGTGTCTGCTGCCTCCATCCCAGCTGTGCACATCAATCAGGCCACG
AACGGCGGCGGCAGCGCCTTCAGCGACTACTCCTCCTCAGTCCCCTCCACCCCTAGCATCAGTC
AGCGGGAGCTGCGCATCGAGACCATCGCTGCCTCTTCCACCCCCACACCCATCCGCAAGCAGTC
CAAGCGGCGCTCTAACATCTTCACGTCTCGAAAAGGTGCTGACCCGGACAGGGAGAAGAAAGCT
GCGGAGTGTAAAGTGGACAGCATTGGGAGCGGCCGGGCCATCCCTATCAAGCAGGGGATCCTGC
TGAAAAGGAGCGGCAAATCCTTGAACAAGGAGTGGAAAAAGAAGTATGTGACACTGTGTGACAA
CGGGCTGCTTACTTACCACCCCAGCCTGCACGATTACATGCAGAACATCCACGGCAAAGAGATC
GACCTCCTGCGGACCACAGTCAAAGTGCCAGGGAAGCGCCTGCCCCGAGCCACTCCCTCCACAG
CTCCGGGCACCAGTCCCCGTGGTGCCAACGGGTTGGCCCTGGAGCGGAGTAACACACAGCTGGG
TGGTACCACAGGTCGCCCCCACTCGGCCAGCAGTGCATCCCTGCATTCTGAGCGCCCTCACCGC
TCAGCCTGGGCTGGCTCACGCCCTGAGGGGTTGCACCAGCGCTCCTGTTCCATTTCCAGCACTG
ACCAGTGGAGTGCGGCAGCTGCCCTGCCTGCCAGCGTGCAGCGTCCTGAGACAGAGGAGTCCTT
TGAATTTGTGGTGGTGTCCCTCACTGGTCAGACCTGGCACTTCGAGGCCTCAACAGCGGAAGAG
CGGGAGCTGTGGGTGCAGAGCGTACAGGCCCAAATCCTCGCCAGCCTCCAGGGATGTCGCAGCG
CCAAGGACAAGACCCGGCTGGGGAACCAGAGCACAGCCCTGGCTGTGCAGACTGTCCGCACAGC
CCGTGGCAATAGCTTCTGTGTTGACTGCGAAGCTCCCAATCCAGACTGGGCCAGCCTGAATCTG
GGTGCCCTGATGTGTATCGAGTGTTCAGGGATCCACCGACACCTGGGAGCTCACCTGTCCCGAG
TCCGCTCCCTGGACCTTGATGACTGGCCACCCGAACTGCTAGCTGTCATGACCGCAATGGGCAA
TGCCTTGGCTAACAGTGTCTGGGAGGGGGCTCTGGATGGCTACTCGAAGCCAGGCCCAGAAGCC
TGCAGAGAGGAGAAGGAACGCTGGATCCGGGCCAAGTATGAACAGAAGCTCTTCCTGGCCCCAC
TGCCGAGCTCGGATGTGCCTCTGGGGCAGCAGTTACTCCGGGCCGTGGTGGAGGATGACCTACG
ACTGCTGGTGATGCTGCTGGCCCATGGGTCCAAGGAGGAGGTGAACGAGACCTACGGGGATGGC
GATGGCAGGACAGCCCTGCACCTGTCCAGTGCCATGGCCAACGTCGTTTTCACACAGCTGCTCA
TCTGGTACGGGGTGGACGTGAGGAGCCGTGATGCCCGAGGCCTGACCCCACTGGCCTATGCCCG
CCGTGCCGGCAGCCAGGAGTGTGCAGACATCTTGATCCAGCATGGGTGCCCCGGGGAGGGCTGT
GGGTTAGCACCCACTCCCAACAGAGAGCCTGCCAACGGCACCAACCCTTCTGCAGAACTGCACC
GCAGCCCTAGTATCCTATGAAGCTCAGGAAGAGGCCAGAGGGACCAGAAGGACTCCACAGCCTG
GAGGGGACATGGCGAAGCAGGGGTGCAGAGAAGAGGGGTGACGAGGGCGCAGGGATGAAGAGGT
CTGTGATTAAGCTGCAGCAGAGCAGGGTCTGTCATTCAGCCCTCTGCCCTGTGGTGCCATTAAA
GGACAGAACCCTTTGGAGGTGCCTGTGAGGAGAGGGGGGCAGGACCTCTCCCTCCTCCAGAACC
CTGCCTCCTCAGGACACCTCCCACAGTCCTCCCTGCAGTGGACAGGGACACAGGACATAAGATG
GGGTACCAGATGAAAGAAAGACAAGGGGCCGATCTGTGAGTCCCATGTAAAACTTGTACATTGG
AATATTTATGTTCGTGTATATACGTGGTGTGTGAGCCAATAAACCAGGCTGTATGTGTGGC

hide sequence

RefSeq Acc Id:

XM_006235940 ⟹ XP_006236002

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	11,567,197 - 11,595,754 (-)	NCBI
mRatBN7.2	4	10,674,755 - 10,707,687 (-)	NCBI
Rnor_6.0	4	7,203,016 - 7,231,450 (-)	NCBI
Rnor_5.0	4	7,213,697 - 7,264,499 (-)	NCBI

Sequence:

show sequence

CGGCCGCGGCCCCGGCCCGGGTCCAGCCCCGCGTCCCTCGCCATGGGCCTGGCCTTCGCCTGTG
GGCCCTGAGCATGGAGCGGGGCTGGCCGCCCGGGGCAAGCTGCAGCGGGGAGCGGCCGGCCGTC
TGCCGCCGCGCCCTCAGCGTCTGCGACTCGCTGGACCTGCACAGCACCTCGGCCGACCGGACCG
CCGCCGCCCTGCAGGCCGCCTTGTGCACCGCGCACGAACAGCCTGCGCGGCCACGGAGCGTGTG
CTCCGGGACTCCGGGGTCGGCGCCCTCTGGTGCGCGCGGCCTACTACTCGGCCTCTTGCGCCCG
CGCCACGGCCGTCGGGGCCCTGCGCCCTCAGAACGGCCCGGCTCACCGCCGCCCAGTCCTGAGC
TCAGCCCCGCGCCTACCTGGCGCAGCCGCGGTCCTGGAGAGAGGGCATCCAGGCCGCGGCCCAC
CAGCATGACGTTCCTGGAGGTGAACCGTCTAGAGCTGGCGGCTACGGAGGCGCCGGGCACAGGG
CTTGGACGCACGGGAAGTTCGGGCTTCCTGCGAGGAGCGTCGCTGTGGAGTAGCCAGCGCTGGC
AGGTGTTCCGTGGTGGTGGCAGCGGCCGCGGCGCAGAGAGTCCCCGGCGCGGGCTGTCCGCGCT
CAGGAAGAGCTTTAGCTTCCGTCTGCGCCGCGGCCAGGAGATCCGGCGCTCCGAATCCGGGCTT
CTTGCCCGGCCACCCCGCACGCGTACCCGCAGCGACGGCGACGCCAGCTCCCTGGGTACCTTCC
CCAGTCGCCGAGACTTGCTGGGCACCGATACCCCGTGCCCGCCACCGGAGCCTGGCCGCCCCCG
CGCCGCCGCCAGCCTCTGGAAGCTGCTCACCAGCCGCTTCCGCCGGAGGGAGCCCGCGCCCGCA
GCGCCGCTGTGGAGCCGCCGGGCAGCCCCAGCCCCAGGATTCCTGGGCGCGCACAGCGACTCAT
TTGTGAACAGCCAGGAGTGGACCCTGAGCCGCTCTGTGCCGGAGCTTAAAGTGGGCATAGTGGG
GAACCTGTCTAGTGGGAAATCCGCCTTGGTTCACCGGTATCTGACAGGGACCTACGTCCAGGAA
GAATCCCCTGAAGGGGGTCGGTTTAAAAAGGAGATTGTGGTGGATGGCCAGAGTTACCTGCTGC
TGATCCGAGATGAAGGAGGCCCCCCTGAGCTCCAGTTTGCTGCCTGGGTGGATGCGGTGGTGTT
TGTGTTCAGCCTGGAGGATGAAATCAGCTTCCAGACAGTGTACAACTACTTCCTGCGCCTCTGC
AGCTTCCGGAATGCCAGCGAGGTGCCCATGGTGCTGGTGGGCACGCAGGATGCTATCAGTGCTG
CCAATCCCCGGGTCATTGATGACAGCAGGGCCCGCAAGCTGTCCACAGACCTGAAGCGCTGTAC
CTACTATGAGACATGCGCAACCTATGGGCTCAATGTGGAGCGAGTCTTCCAGGACGTGGCCCAG
AAAGTGGTAGCCTTGCGGAAGAAGCAGCAGCTGGCCATCGGGCCCTGCAAGTCCCTGCCCAACT
CACCCAGCCACTCGGCCGTGTCTGCTGCCTCCATCCCAGCTGTGCACATCAATCAGGCCACGAA
CGGCGGCGGCAGCGCCTTCAGCGACTACTCCTCCTCAGTCCCCTCCACCCCTAGCATCAGTCAG
CGGGAGCTGCGCATCGAGACCATCGCTGCCTCTTCCACCCCCACACCCATCCGCAAGCAGTCCA
AGCGGCGCTCTAACATCTTCACGTCTCGAAAAGGTGCTGACCCGGACAGGGAGAAGAAAGCTGC
GGAGTGTAAAGTGGACAGCATTGGGAGCGGCCGGGCCATCCCTATCAAGCAGGGGATCCTGCTG
AAAAGGAGCGGCAAATCCTTGAACAAGGAGTGGAAAAAGAAGTATGTGACACTGTGTGACAACG
GGCTGCTTACTTACCACCCCAGCCTGCACGATTACATGCAGAACATCCACGGCAAAGAGATCGA
CCTCCTGCGGACCACAGTCAAAGTGCCAGGGAAGCGCCTGCCCCGAGCCACTCCCTCCACAGCT
CCGGGCACCAGTCCCCGTGGTGCCAACGGGTTGGCCCTGGAGCGGAGTAACACACAGCTGGGTG
GTACCACAGAGACAGAGGAGTCCTTTGAATTTGTGGTGGTGTCCCTCACTGGTCAGACCTGGCA
CTTCGAGGCCTCAACAGCGGAAGAGCGGGAGCTGTGGGTGCAGAGCGTACAGGCCCAAATCCTC
GCCAGCCTCCAGGGATGTCGCAGCGCCAAGGACAAGACCCGGCTGGGGAACCAGAGCACAGCCC
TGGCTGTGCAGACTGTCCGCACAGCCCGTGGCAATAGCTTCTGTGTTGACTGCGAAGCTCCCAA
TCCAGACTGGGCCAGCCTGAATCTGGGTGCCCTGATGTGTATCGAGTGTTCAGGGATCCACCGA
CACCTGGGAGCTCACCTGTCCCGAGTCCGCTCCCTGGACCTTGATGACTGGCCACCCGAACTGC
TAGCTGTCATGACCGCAATGGGCAATGCCTTGGCTAACAGTGTCTGGGAGGGGGCTCTGGATGG
CTACTCGAAGCCAGGCCCAGAAGCCTGCAGAGAGGAGAAGGAACGCTGGATCCGGGCCAAGTAT
GAACAGAAGCTCTTCCTGGCCCCACTGCCGAGCTCGGATGTGCCTCTGGGGCAGCAGTTACTCC
GGGCCGTGGTGGAGGATGACCTACGACTGCTGGTGATGCTGCTGGCCCATGGGTCCAAGGAGGA
GGTGAACGAGACCTACGGGGATGGCGATGGCAGGACAGCCCTGCACCTGTCCAGTGCCATGGCC
AACGTCGTTTTCACACAGCTGCTCATCTGGTACGGGGTGGACGTGAGGAGCCGTGATGCCCGAG
GCCTGACCCCACTGGCCTATGCCCGCCGTGCCGGCAGCCAGGAGTGTGCAGACATCTTGATCCA
GCATGGGTGCCCCGGGGAGGGCTGTGGGTTAGCACCCACTCCCAACAGAGAGCCTGCCAACGGC
ACCAACCCTTCTGCAGAACTGCACCGCAGCCCTAGTATCCTATGAAGCTCAGGAAGAGGCCAGA
GGGACCAGAAGGACTCCACAGCCTGGAGGGGACATGGCGAAGCAGGGGTGCAGAGAAGAGGGGT
GACGAGGGCGCAGGGATGAAGAGGTCTGTGATTAAGCTGCAGCAGAGCAGGGTCTGTCATTCAG
CCCTCTGCCCTGTGGTGCCATTAAAGGACAGAACCCTTTGGAGGTGCCTGTGAGGAGAGGGGGG
CAGGACCTCTCCCTCCTCCAGAACCCTGCCTCCTCAGGACACCTCCCACAGTCCTCCCTGCAGT
GGACAGGGACACAGGACATAAGATGGGGTACCAGATGAAAGAAAGACAAGGGGCCGATCTGTGA
GTCCCATGTAAAACTTGTACATTGGAATATTTATGTTCGTGTATATACGTGGTGTGTGAGCCAA
TAAACCAGGCTGTATGTGTGGC

hide sequence

RefSeq Acc Id:

XM_006235941 ⟹ XP_006236003

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	11,567,197 - 11,617,610 (-)	NCBI
mRatBN7.2	4	10,674,750 - 10,724,848 (-)	NCBI
Rnor_6.0	4	7,203,016 - 7,253,386 (-)	NCBI
Rnor_5.0	4	7,213,697 - 7,264,499 (-)	NCBI

Sequence:

show sequence

CGGAGCCGGCGGGGGCGGCGGTGCGTGCGCATGACGCGGGGGGAGGGCCCGGGCCGCGCGCTCC
CGGTCCCGTTGTTGTTGCCGCTGGAGGCAGCTCCAAGGCGGCGGGATCTCAGCGCCGGTAAACG
CCGGGCGGCGGCCCCAGCGTGCGCGACCGCGCCTTTTGGCCTCGGCTCCGGGCCTCATGCGCTA
GCCCTGTGCCGCGCGCTTCCTAGTTAGGGTCCCGCCAGCCCCGCGCGCCTACTCGCCGCCGCCG
CCGCCGCGCCGCCCCAGGCCCTGGCTGGGCCCGCTTTGGGCCCCGCGCCTCCGGAGCCATGAAC
TTCCAGGCGGGCGGGGGCCAGAGTCCTCAGCAGCAGCAGAGCCTGGCGGCTCCGGGGGGCGGCG
GCAGCGGCGGCGGCGGCGCGGGGGGCGGCGGGCAGTTCGGCGGCGCGGGGCCCGGAGCCGGGGG
TGGCGGCCCCTCGCAGCAGCTGGCCGGCGGGCCCCCCCAGCAGTTTGCGCTCTCCAACTCGGCC
GCTATCCGGGCCGAGATCCAGCGCTTCGAGTCGGTACACCCCAACATCTACGCCATCTACGACC
TGATCGAGCGAATCGAGGATTTGGCACTGCAGAATCAGATCCGGGAGCACGTCATCTCCATCGA
GGACTCATTTGTGAACAGCCAGGAGTGGACCCTGAGCCGCTCTGTGCCGGAGCTTAAAGTGGGC
ATAGTGGGGAACCTGTCTAGTGGGAAATCCGCCTTGGTTCACCGGTATCTGACAGGGACCTACG
TCCAGGAAGAATCCCCTGAAGGGGGTCGGTTTAAAAAGGAGATTGTGGTGGATGGCCAGAGTTA
CCTGCTGCTGATCCGAGATGAAGGAGGCCCCCCTGAGCTCCAGTTTGCTGCCTGGGTGGATGCG
GTGGTGTTTGTGTTCAGCCTGGAGGATGAAATCAGCTTCCAGACAGTGTACAACTACTTCCTGC
GCCTCTGCAGCTTCCGGAATGCCAGCGAGGTGCCCATGGTGCTGGTGGGCACGCAGGATGCTAT
CAGTGCTGCCAATCCCCGGGTCATTGATGACAGCAGGGCCCGCAAGCTGTCCACAGACCTGAAG
CGCTGTACCTACTATGAGACATGCGCAACCTATGGGCTCAATGTGGAGCGAGTCTTCCAGGACG
TGGCCCAGAAAGTGGTAGCCTTGCGGAAGAAGCAGCAGCTGGCCATCGGGCCCTGCAAGTCCCT
GCCCAACTCACCCAGCCACTCGGCCGTGTCTGCTGCCTCCATCCCAGCTGTGCACATCAATCAG
GCCACGAACGGCGGCGGCAGCGCCTTCAGCGACTACTCCTCCTCAGTCCCCTCCACCCCTAGCA
TCAGTCAGCGGGAGCTGCGCATCGAGACCATCGCTGCCTCTTCCACCCCCACACCCATCCGCAA
GCAGTCCAAGCGGCGCTCTAACATCTTCACGTCTCGAAAAGGTGCTGACCCGGACAGGGAGAAG
AAAGCTGCGGAGTGTAAAGTGGACAGCATTGGGAGCGGCCGGGCCATCCCTATCAAGCAGGGGA
TCCTGCTGAAAAGGAGCGGCAAATCCTTGAACAAGGAGTGGAAAAAGAAGTATGTGACACTGTG
TGACAACGGGCTGCTTACTTACCACCCCAGCCTGCACGATTACATGCAGAACATCCACGGCAAA
GAGATCGACCTCCTGCGGACCACAGTCAAAGTGCCAGGGAAGCGCCTGCCCCGAGCCACTCCCT
CCACAGCTCCGGGCACCAGTCCCCGTGGTGCCAACGGGTTGGCCCTGGAGCGGAGTAACACACA
GCTGGGTGGTACCACAGGTCGCCCCCACTCGGCCAGCAGTGCATCCCTGCATTCTGAGCGCCCT
CACCGCTCAGCCTGGGCTGGCTCACGCCCTGAGGGGTTGCACCAGCGCTCCTGTTCCATTTCCA
GCACTGACCAGTGGAGTGCGGCAGCTGCCCTGCCTGCCAGCGTGCAGCGTCCTGCCAGTGGCCC
AGCTGAGTTACTCAGTTCCAGCCCCAAGCTGGAGCCTCCCCCATCTCCCCGCTCCAACCGGAAG
AAGCAGCGCCGGAAAAAGAGCACCGGGACCCCCAGACCAGATGGCCCCAACAGTGCTGCTGAAG
AGACAGAGGAGTCCTTTGAATTTGTGGTGGTGTCCCTCACTGGTCAGACCTGGCACTTCGAGGC
CTCAACAGCGGAAGAGCGGGAGCTGTGGGTGCAGAGCGTACAGGCCCAAATCCTCGCCAGCCTC
CAGGGATGTCGCAGCGCCAAGGACAAGACCCGGCTGGGGAACCAGAGCACAGCCCTGGCTGTGC
AGACTGTCCGCACAGCCCGTGGCAATAGCTTCTGTGTTGACTGCGAAGCTCCCAATCCAGACTG
GGCCAGCCTGAATCTGGGTGCCCTGATGTGTATCGAGTGTTCAGGGATCCACCGACACCTGGGA
GCTCACCTGTCCCGAGTCCGCTCCCTGGACCTTGATGACTGGCCACCCGAACTGCTAGCTGTCA
TGACCGCAATGGGCAATGCCTTGGCTAACAGTGTCTGGGAGGGGGCTCTGGATGGCTACTCGAA
GCCAGGCCCAGAAGCCTGCAGAGAGGAGAAGGAACGCTGGATCCGGGCCAAGTATGAACAGAAG
CTCTTCCTGGCCCCACTGCCGAGCTCGGATGTGCCTCTGGGGCAGCAGTTACTCCGGGCCGTGG
TGGAGGATGACCTACGACTGCTGGTGATGCTGCTGGCCCATGGGTCCAAGGAGGAGGTGAACGA
GACCTACGGGGATGGCGATGGCAGGACAGCCCTGCACCTGTCCAGTGCCATGGCCAACGTCGTT
TTCACACAGCTGCTCATCTGGTACGGGGTGGACGTGAGGAGCCGTGATGCCCGAGGCCTGACCC
CACTGGCCTATGCCCGCCGTGCCGGCAGCCAGGAGTGTGCAGACATCTTGATCCAGCATGGGTG
CCCCGGGGAGGGCTGTGGGTTAGCACCCACTCCCAACAGAGAGCCTGCCAACGGCACCAACCCT
TCTGCAGAACTGCACCGCAGCCCTAGTATCCTATGAAGCTCAGGAAGAGGCCAGAGGGACCAGA
AGGACTCCACAGCCTGGAGGGGACATGGCGAAGCAGGGGTGCAGAGAAGAGGGGTGACGAGGGC
GCAGGGATGAAGAGGTCTGTGATTAAGCTGCAGCAGAGCAGGGTCTGTCATTCAGCCCTCTGCC
CTGTGGTGCCATTAAAGGACAGAACCCTTTGGAGGTGCCTGTGAGGAGAGGGGGGCAGGACCTC
TCCCTCCTCCAGAACCCTGCCTCCTCAGGACACCTCCCACAGTCCTCCCTGCAGTGGACAGGGA
CACAGGACATAAGATGGGGTACCAGATGAAAGAAAGACAAGGGGCCGATCTGTGAGTCCCATGT
AAAACTTGTACATTGGAATATTTATGTTCGTGTATATACGTGGTGTGTGAGCCAATAAACCAGG
CTGTATGTGTGGC

hide sequence

RefSeq Acc Id:

XM_006235943 ⟹ XP_006236005

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	11,586,515 - 11,617,605 (-)	NCBI
mRatBN7.2	4	10,694,076 - 10,724,848 (-)	NCBI
Rnor_6.0	4	7,222,336 - 7,253,385 (-)	NCBI
Rnor_5.0	4	7,213,697 - 7,264,499 (-)	NCBI

Sequence:

show sequence

GGAGCCGGCGGGGGCGGCGGTGCGTGCGCATGACGCGGGGGGAGGGCCCGGGCCGCGCGCTCCC
GGTCCCGTTGTTGTTGCCGCTGGAGGCAGCTCCAAGGCGGCGGGATCTCAGCGCCGGTAAACGC
CGGGCGGCGGCCCCAGCGTGCGCGACCGCGCCTTTTGGCCTCGGCTCCGGGCCTCATGCGCTAG
CCCTGTGCCGCGCGCTTCCTAGTTAGGGTCCCGCCAGCCCCGCGCGCCTACTCGCCGCCGCCGC
CGCCGCGCCGCCCCAGGCCCTGGCTGGGCCCGCTTTGGGCCCCGCGCCTCCGGAGCCATGAACT
TCCAGGCGGGCGGGGGCCAGAGTCCTCAGCAGCAGCAGAGCCTGGCGGCTCCGGGGGGCGGCGG
CAGCGGCGGCGGCGGCGCGGGGGGCGGCGGGCAGTTCGGCGGCGCGGGGCCCGGAGCCGGGGGT
GGCGGCCCCTCGCAGCAGCTGGCCGGCGGGCCCCCCCAGCAGTTTGCGCTCTCCAACTCGGCCG
CTATCCGGGCCGAGATCCAGCGCTTCGAGTCGGTACACCCCAACATCTACGCCATCTACGACCT
GATCGAGCGAATCGAGGATTTGGCACTGCAGAATCAGATCCGGGAGCACGTCATCTCCATCGAG
GACTCATTTGTGAACAGCCAGGAGTGGACCCTGAGCCGCTCTGTGCCGGAGCTTAAAGTGGGCA
TAGTGGGGAACCTGTCTAGTGGGAAATCCGCCTTGGTTCACCGGTATCTGACAGGGACCTACGT
CCAGGAAGAATCCCCTGAAGGGGGTCGGTTTAAAAAGGAGATTGTGGTGGATGGCCAGAGTTAC
CTGCTGCTGATCCGAGATGAAGGAGGCCCCCCTGAGCTCCAGTTTGCTGCCTGGGTGGATGCGG
TGGTGTTTGTGTTCAGCCTGGAGGATGAAATCAGCTTCCAGACAGTGTACAACTACTTCCTGCG
CCTCTGCAGCTTCCGGAATGCCAGCGAGGTGCCCATGGTGCTGGTGGGCACGCAGGATGCTATC
AGTGCTGCCAATCCCCGGGTCATTGATGACAGCAGGGCCCGCAAGCTGTCCACAGACCTGAAGC
GCTGTACCTACTATGAGACATGCGCAACCTATGGGCTCAATGTGGAGCGAGTCTTCCAGGACGT
GGCCCAGAAAGTGGTAGCCTTGCGGAAGAAGCAGCAGCTGGCCATCGGGCCCTGCAAGTCCCTG
CCCAACTCACCCAGCCACTCGGCCGTGTCTGCTGCCTCCATCCCAGCTGTGCACATCAATCAGG
CCACGAACGGCGGCGGCAGCGCCTTCAGCGACTACTCCTCCTCAGTCCCCTCCACCCCTAGCAT
CAGTCAGCGGGAGCTGCGCATCGAGACCATCGCTGCCTCTTCCACCCCCACACCCATCCGCAAG
CAGTCCAAGCGGCGCTCTAACATCTTCACGATATGTGCCACTGTTTCCAACTTTTCATCAACAA
AAAGGCCTTTCCAACTCCTTCCAAATTAGAAGACCAGGTGGTGATACACAGCACCTCTGGACAT
TCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGACTGCTCTCAGATGAGAAGCGGCCGC
CGAGCTCCCCGCTCCAGAGACCCACAGGAACCTTTGTAACTAACCCTACCCCCAGGGAAGGCTA
GGAACGCCGGAGCCCGCGCTGGGGGCTGCCGGGGGACCAGGCCCGGCTGGATGCTGCGCCAGGC
TCGCTGAATGGAGAAGAAGGGAGCTCGGCCCACGCCGGCCGGCCAAAGCGACGAGGCCCAGAGG
GGCGGGGGCACTCAAGCCCGCTGGCCCAGCTGCTCCTGGGGGGAGCTTTCCTGCCCCTCCCCTC
CTCTGCTCCTTCCTGCATGGACTTCTGCTGTACCTGCTCCTGCTCCGGAAGCCGCCGCCACCGC
GCTTGCCTTGCCCCCTCTTTTTGGCCCCTCCCCATTTCCTAGGATCCGCATTTGGGTGGACTCT
GCCCCAGGAGCTTGGCAGGGTGCAGGCCCTCTTCTGGCCTCTCTCCTCTCTCTCTCCATCCACT
GTGCCCCTTGGGCCACACCGACGCGCTCGGTGCCATGTGGTGTCTGTGCCACAAACGAGCACCT
GCCCGCTCACTTCTGGACTTTGCTATCCCTGGTTGTCGTGCCCTATGCTCCTGGCCAGCCCTCA
GCCCCACTGGGCCACCTCTCCTCGCCCCTCCCTTCACTTAACAAACTCCAGACCCTGGGCTGCG
CACTCATTGCGCCCTCCGTATTTCATGTCCTTGCTCTTTGTGAGGGGCGGGCCTGGCTCAGTGA
CCTGTGCTGCTCTGTATGGTGCCGTGTGTAAGAATAAACCCATTGGAATA

hide sequence

RefSeq Acc Id:

XM_008762650 ⟹ XP_008760872

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	11,567,197 - 11,617,609 (-)	NCBI
mRatBN7.2	4	10,674,750 - 10,724,848 (-)	NCBI
Rnor_6.0	4	7,203,016 - 7,253,385 (-)	NCBI

Sequence:

show sequence

GGAGCCGGCGGGGGCGGCGGTGCGTGCGCATGACGCGGGGGGAGGGCCCGGGCCGCGCGCTCCC
GGTCCCGTTGTTGTTGCCGCTGGAGGCAGCTCCAAGGCGGCGGGATCTCAGCGCCGGTAAACGC
CGGGCGGCGGCCCCAGCGTGCGCGACCGCGCCTTTTGGCCTCGGCTCCGGGCCTCATGCGCTAG
CCCTGTGCCGCGCGCTTCCTAGTTAGGGTCCCGCCAGCCCCGCGCGCCTACTCGCCGCCGCCGC
CGCCGCGCCGCCCCAGGCCCTGGCTGGGCCCGCTTTGGGCCCCGCGCCTCCGGAGCCATGAACT
TCCAGGCGGGCGGGGGCCAGAGTCCTCAGCAGCAGCAGAGCCTGGCGGCTCCGGGGGGCGGCGG
CAGCGGCGGCGGCGGCGCGGGGGGCGGCGGGCAGTTCGGCGGCGCGGGGCCCGGAGCCGGGGGT
GGCGGCCCCTCGCAGCAGCTGGCCGGCGGGCCCCCCCAGCAGTTTGCGCTCTCCAACTCGGCCG
CTATCCGGGCCGAGATCCAGCGCTTCGAGTCGGTACACCCCAACATCTACGCCATCTACGACCT
GATCGAGCGAATCGAGGATTTGGCACTGCAGAATCAGATCCGGGAGCACGTCATCTCCATCGAG
GACTCATTTGTGAACAGCCAGGAGTGGACCCTGAGCCGCTCTGTGCCGGAGCTTAAAGTGGGCA
TAGTGGGGAACCTGTCTAGTGGGAAATCCGCCTTGGTTCACCGGTATCTGACAGGGACCTACGT
CCAGGAAGAATCCCCTGAAGGGGGTCGGTTTAAAAAGGAGATTGTGGTGGATGGCCAGAGTTAC
CTGCTGCTGATCCGAGATGAAGGAGGCCCCCCTGAGCTCCAGTTTGCTGCCTGGGTGGATGCGG
TGGTGTTTGTGTTCAGCCTGGAGGATGAAATCAGCTTCCAGACAGTGTACAACTACTTCCTGCG
CCTCTGCAGCTTCCGGAATGCCAGCGAGGTGCCCATGGTGCTGGTGGGCACGCAGGATGCTATC
AGTGCTGCCAATCCCCGGGTCATTGATGACAGCAGGGCCCGCAAGCTGTCCACAGACCTGAAGC
GCTGTACCTACTATGAGACATGCGCAACCTATGGGCTCAATGTGGAGCGAGTCTTCCAGGACGT
GGCCCAGAAAGTGGTAGCCTTGCGGAAGAAGCAGCAGCTGGCCATCGGGCCCTGCAAGTCCCTG
CCCAACTCACCCAGCCACTCGGCCGTGTCTGCTGCCTCCATCCCAGCTGTGCACATCAATCAGG
CCACGAACGGCGGCGGCAGCGCCTTCAGCGACTACTCCTCCTCAGTCCCCTCCACCCCTAGCAT
CAGTCAGCGGGAGCTGCGCATCGAGACCATCGCTGCCTCTTCCACCCCCACACCCATCCGCAAG
CAGTCCAAGCGGCGCTCTAACATCTTCACGTCTCGAAAAGGTGCTGACCCGGACAGGGAGAAGA
AAGCTGCGGAGTGTAAAGTGGACAGCATTGGGAGCGGCCGGGCCATCCCTATCAAGCAGGGGAT
CCTGCTGAAAAGGAGCGGCAAATCCTTGAACAAGGAGTGGAAAAAGAAGTATGTGACACTGTGT
GACAACGGGCTGCTTACTTACCACCCCAGCCTGCACGATTACATGCAGAACATCCACGGCAAAG
AGATCGACCTCCTGCGGACCACAGTCAAAGTGCCAGGGAAGCGCCTGCCCCGAGCCACTCCCTC
CACAGCTCCGGGCACCAGTCCCCGTGGTGCCAACGGGTTGGCCCTGGAGCGGAGCTCTCTTTCC
ATCTCCCCCTCCTCCCACACTTGTCCACCTCTCCCCTCACCAGCCAGTGGCCCAGCTGAGTTAC
TCAGTTCCAGCCCCAAGCTGGAGCCTCCCCCATCTCCCCGCTCCAACCGGAAGAAGCAGCGCCG
GAAAAAGAGCACCGGGACCCCCAGACCAGATGGCCCCAACAGTGCTGCTGAAGAGACAGAGGAG
TCCTTTGAATTTGTGGTGGTGTCCCTCACTGGTCAGACCTGGCACTTCGAGGCCTCAACAGCGG
AAGAGCGGGAGCTGTGGGTGCAGAGCGTACAGGCCCAAATCCTCGCCAGCCTCCAGGGATGTCG
CAGCGCCAAGGACAAGACCCGGCTGGGGAACCAGAGCACAGCCCTGGCTGTGCAGACTGTCCGC
ACAGCCCGTGGCAATAGCTTCTGTGTTGACTGCGAAGCTCCCAATCCAGACTGGGCCAGCCTGA
ATCTGGGTGCCCTGATGTGTATCGAGTGTTCAGGGATCCACCGACACCTGGGAGCTCACCTGTC
CCGAGTCCGCTCCCTGGACCTTGATGACTGGCCACCCGAACTGCTAGCTGTCATGACCGCAATG
GGCAATGCCTTGGCTAACAGTGTCTGGGAGGGGGCTCTGGATGGCTACTCGAAGCCAGGCCCAG
AAGCCTGCAGAGAGGAGAAGGAACGCTGGATCCGGGCCAAGTATGAACAGAAGCTCTTCCTGGC
CCCACTGCCGAGCTCGGATGTGCCTCTGGGGCAGCAGTTACTCCGGGCCGTGGTGGAGGATGAC
CTACGACTGCTGGTGATGCTGCTGGCCCATGGGTCCAAGGAGGAGGTGAACGAGACCTACGGGG
ATGGCGATGGCAGGACAGCCCTGCACCTGTCCAGTGCCATGGCCAACGTCGTTTTCACACAGCT
GCTCATCTGGTACGGGGTGGACGTGAGGAGCCGTGATGCCCGAGGCCTGACCCCACTGGCCTAT
GCCCGCCGTGCCGGCAGCCAGGAGTGTGCAGACATCTTGATCCAGCATGGGTGCCCCGGGGAGG
GCTGTGGGTTAGCACCCACTCCCAACAGAGAGCCTGCCAACGGCACCAACCCTTCTGCAGAACT
GCACCGCAGCCCTAGTATCCTATGAAGCTCAGGAAGAGGCCAGAGGGACCAGAAGGACTCCACA
GCCTGGAGGGGACATGGCGAAGCAGGGGTGCAGAGAAGAGGGGTGACGAGGGCGCAGGGATGAA
GAGGTCTGTGATTAAGCTGCAGCAGAGCAGGGTCTGTCATTCAGCCCTCTGCCCTGTGGTGCCA
TTAAAGGACAGAACCCTTTGGAGGTGCCTGTGAGGAGAGGGGGGCAGGACCTCTCCCTCCTCCA
GAACCCTGCCTCCTCAGGACACCTCCCACAGTCCTCCCTGCAGTGGACAGGGACACAGGACATA
AGATGGGGTACCAGATGAAAGAAAGACAAGGGGCCGATCTGTGAGTCCCATGTAAAACTTGTAC
ATTGGAATATTTATGTTCGTGTATATACGTGGTGTGTGAGCCAATAAACCAGGCTGTATGTGTG
GC

hide sequence

RefSeq Acc Id:

XM_017592682 ⟹ XP_017448171

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	11,586,515 - 11,595,730 (-)	NCBI
mRatBN7.2	4	10,694,076 - 10,707,711 (-)	NCBI
Rnor_6.0	4	7,222,336 - 7,231,456 (-)	NCBI

Sequence:

show sequence

GCGCCCCGGCCGCGGCCCCGGCCCGGGTCCAGCCCCGCGTCCCTCGCCATGGGCCTGGCCTTCG
CCTGTGGGCCCTGAGCATGGAGCGGGGCTGGCCGCCCGGGGCAAGCTGCAGCGGGGAGCGGCCG
GCCGTCTGCCGCCGCGCCCTCAGCGTCTGCGACTCGCTGGACCTGCACAGCACCTCGGCCGACC
GGACCGCCGCCGCCCTGCAGGCCGCCTTGTGCACCGCGCACGAACAGCCTGCGCGGCCACGGAG
CGTGTGCTCCGGGACTCCGGGGTCGGCGCCCTCTGGTGCGCGCGGCCTACTACTCGGCCTCTTG
CGCCCGCGCCACGGCCGTCGGGGCCCTGCGCCCTCAGAACGGCCCGGCTCACCGCCGCCCAGTC
CTGAGCTCAGCCCCGCGCCTACCTGGCGCAGCCGCGGTCCTGGAGAGAGGGCATCCAGGCCGCG
GCCCACCAGCATGACGTTCCTGGAGGTGAACCGTCTAGAGCTGGCGGCTACGGAGGCGCCGGGC
ACAGGGCTTGGACGCACGGGAAGTTCGGGCTTCCTGCGAGGAGCGTCGCTGTGGAGTAGCCAGC
GCTGGCAGGTGTTCCGTGGTGGTGGCAGCGGCCGCGGCGCAGAGAGTCCCCGGCGCGGGCTGTC
CGCGCTCAGGAAGAGCTTTAGCTTCCGTCTGCGCCGCGGCCAGGAGATCCGGCGCTCCGAATCC
GGGCTTCTTGCCCGGCCACCCCGCACGCGTACCCGCAGCGACGGCGACGCCAGCTCCCTGGGTA
CCTTCCCCAGTCGCCGAGACTTGCTGGGCACCGATACCCCGTGCCCGCCACCGGAGCCTGGCCG
CCCCCGCGCCGCCGCCAGCCTCTGGAAGCTGCTCACCAGCCGCTTCCGCCGGAGGGAGCCCGCG
CCCGCAGCGCCGCTGTGGAGCCGCCGGGCAGCCCCAGCCCCAGGATTCCTGGGCGCGCACAGCG
ACTCATTTGTGAACAGCCAGGAGTGGACCCTGAGCCGCTCTGTGCCGGAGCTTAAAGTGGGCAT
AGTGGGGAACCTGTCTAGTGGGAAATCCGCCTTGGTTCACCGGTATCTGACAGGGACCTACGTC
CAGGAAGAATCCCCTGAAGGGGGTCGGTTTAAAAAGGAGATTGTGGTGGATGGCCAGAGTTACC
TGCTGCTGATCCGAGATGAAGGAGGCCCCCCTGAGCTCCAGTTTGCTGCCTGGGTGGATGCGGT
GGTGTTTGTGTTCAGCCTGGAGGATGAAATCAGCTTCCAGACAGTGTACAACTACTTCCTGCGC
CTCTGCAGCTTCCGGAATGCCAGCGAGGTGCCCATGGTGCTGGTGGGCACGCAGGATGCTATCA
GTGCTGCCAATCCCCGGGTCATTGATGACAGCAGGGCCCGCAAGCTGTCCACAGACCTGAAGCG
CTGTACCTACTATGAGACATGCGCAACCTATGGGCTCAATGTGGAGCGAGTCTTCCAGGACGTG
GCCCAGAAAGTGGTAGCCTTGCGGAAGAAGCAGCAGCTGGCCATCGGGCCCTGCAAGTCCCTGC
CCAACTCACCCAGCCACTCGGCCGTGTCTGCTGCCTCCATCCCAGCTGTGCACATCAATCAGGC
CACGAACGGCGGCGGCAGCGCCTTCAGCGACTACTCCTCCTCAGTCCCCTCCACCCCTAGCATC
AGTCAGCGGGAGCTGCGCATCGAGACCATCGCTGCCTCTTCCACCCCCACACCCATCCGCAAGC
AGTCCAAGCGGCGCTCTAACATCTTCACGATATGTGCCACTGTTTCCAACTTTTCATCAACAAA
AAGGCCTTTCCAACTCCTTCCAAATTAGAAGACCAGGTGGTGATACACAGCACCTCTGGACATT
CCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGACTGCTCTCAGATGAGAAGCGGCCGCC
GAGCTCCCCGCTCCAGAGACCCACAGGAACCTTTGTAACTAACCCTACCCCCAGGGAAGGCTAG
GAACGCCGGAGCCCGCGCTGGGGGCTGCCGGGGGACCAGGCCCGGCTGGATGCTGCGCCAGGCT
CGCTGAATGGAGAAGAAGGGAGCTCGGCCCACGCCGGCCGGCCAAAGCGACGAGGCCCAGAGGG
GCGGGGGCACTCAAGCCCGCTGGCCCAGCTGCTCCTGGGGGGAGCTTTCCTGCCCCTCCCCTCC
TCTGCTCCTTCCTGCATGGACTTCTGCTGTACCTGCTCCTGCTCCGGAAGCCGCCGCCACCGCG
CTTGCCTTGCCCCCTCTTTTTGGCCCCTCCCCATTTCCTAGGATCCGCATTTGGGTGGACTCTG
CCCCAGGAGCTTGGCAGGGTGCAGGCCCTCTTCTGGCCTCTCTCCTCTCTCTCTCCATCCACTG
TGCCCCTTGGGCCACACCGACGCGCTCGGTGCCATGTGGTGTCTGTGCCACAAACGAGCACCTG
CCCGCTCACTTCTGGACTTTGCTATCCCTGGTTGTCGTGCCCTATGCTCCTGGCCAGCCCTCAG
CCCCACTGGGCCACCTCTCCTCGCCCCTCCCTTCACTTAACAAACTCCAGACCCTGGGCTGCGC
ACTCATTGCGCCCTCCGTATTTCATGTCCTTGCTCTTTGTGAGGGGCGGGCCTGGCTCAGTGAC
CTGTGCTGCTCTGTATGGTGCCGTGTGTAAGAATAAACCCATTGGAATA

hide sequence

RefSeq Acc Id:

XM_039107748 ⟹ XP_038963676

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	11,567,197 - 11,589,452 (-)	NCBI
mRatBN7.2	4	10,674,750 - 10,697,013 (-)	NCBI

RefSeq Acc Id:

XM_039107749 ⟹ XP_038963677

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	11,567,197 - 11,576,550 (-)	NCBI
mRatBN7.2	4	10,674,755 - 10,684,415 (-)	NCBI

RefSeq Acc Id:

XM_039107750 ⟹ XP_038963678

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	11,567,197 - 11,589,452 (-)	NCBI
mRatBN7.2	4	10,674,755 - 10,696,880 (-)	NCBI

RefSeq Acc Id:

XM_063286226 ⟹ XP_063142296

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	11,576,103 - 11,595,730 (-)	NCBI

RefSeq Acc Id:

XM_063286227 ⟹ XP_063142297

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	11,589,252 - 11,595,730 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001385782	(Get FASTA)	NCBI Sequence Viewer
	XP_006236000	(Get FASTA)	NCBI Sequence Viewer
	XP_006236001	(Get FASTA)	NCBI Sequence Viewer
	XP_006236002	(Get FASTA)	NCBI Sequence Viewer
	XP_006236003	(Get FASTA)	NCBI Sequence Viewer
	XP_006236005	(Get FASTA)	NCBI Sequence Viewer
	XP_008760872	(Get FASTA)	NCBI Sequence Viewer
	XP_017448171	(Get FASTA)	NCBI Sequence Viewer
	XP_038963676	(Get FASTA)	NCBI Sequence Viewer
	XP_038963677	(Get FASTA)	NCBI Sequence Viewer
	XP_038963678	(Get FASTA)	NCBI Sequence Viewer
	XP_063142296	(Get FASTA)	NCBI Sequence Viewer
	XP_063142297	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI58717	(Get FASTA)	NCBI Sequence Viewer
	AHA11093	(Get FASTA)	NCBI Sequence Viewer
	EDL99352	(Get FASTA)	NCBI Sequence Viewer
	EDL99353	(Get FASTA)	NCBI Sequence Viewer
	EDL99354	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000063846
	ENSRNOP00000063846.2
	ENSRNOP00000070947
	ENSRNOP00000070947.3
	ENSRNOP00000072199
	ENSRNOP00000072199.2
	ENSRNOP00000077364.2
	ENSRNOP00000100965
	ENSRNOP00000100965.1

RefSeq Acc Id:	XP_006236003 ⟸ XM_006235941
- Peptide Label:	isoform X4
- UniProtKB:	A0A0G2K2D4 (UniProtKB/TrEMBL), U6A022 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNFQAGGGQSPQQQQSLAAPGGGGSGGGGAGGGGQFGGAGPGAGGGGPSQQLAGGPPQQFALSN SAAIRAEIQRFESVHPNIYAIYDLIERIEDLALQNQIREHVISIEDSFVNSQEWTLSRSVPELK VGIVGNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPELQFAAWV DAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQDAISAANPRVIDDSRARKLSTD LKRCTYYETCATYGLNVERVFQDVAQKVVALRKKQQLAIGPCKSLPNSPSHSAVSAASIPAVHI NQATNGGGSAFSDYSSSVPSTPSISQRELRIETIAASSTPTPIRKQSKRRSNIFTSRKGADPDR EKKAAECKVDSIGSGRAIPIKQGILLKRSGKSLNKEWKKKYVTLCDNGLLTYHPSLHDYMQNIH GKEIDLLRTTVKVPGKRLPRATPSTAPGTSPRGANGLALERSNTQLGGTTGRPHSASSASLHSE RPHRSAWAGSRPEGLHQRSCSISSTDQWSAAAALPASVQRPASGPAELLSSSPKLEPPPSPRSN RKKQRRKKSTGTPRPDGPNSAAEETEESFEFVVVSLTGQTWHFEASTAEERELWVQSVQAQILA SLQGCRSAKDKTRLGNQSTALAVQTVRTARGNSFCVDCEAPNPDWASLNLGALMCIECSGIHRH LGAHLSRVRSLDLDDWPPELLAVMTAMGNALANSVWEGALDGYSKPGPEACREEKERWIRAKYE QKLFLAPLPSSDVPLGQQLLRAVVEDDLRLLVMLLAHGSKEEVNETYGDGDGRTALHLSSAMAN VVFTQLLIWYGVDVRSRDARGLTPLAYARRAGSQECADILIQHGCPGEGCGLAPTPNREPANGT NPSAELHRSPSIL hide sequence

RefSeq Acc Id:	XP_006236002 ⟸ XM_006235940
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5Y9H3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MERGWPPGASCSGERPAVCRRALSVCDSLDLHSTSADRTAAALQAALCTAHEQPARPRSVCSGT PGSAPSGARGLLLGLLRPRHGRRGPAPSERPGSPPPSPELSPAPTWRSRGPGERASRPRPTSMT FLEVNRLELAATEAPGTGLGRTGSSGFLRGASLWSSQRWQVFRGGGSGRGAESPRRGLSALRKS FSFRLRRGQEIRRSESGLLARPPRTRTRSDGDASSLGTFPSRRDLLGTDTPCPPPEPGRPRAAA SLWKLLTSRFRRREPAPAAPLWSRRAAPAPGFLGAHSDSFVNSQEWTLSRSVPELKVGIVGNLS SGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPELQFAAWVDAVVFVFS LEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQDAISAANPRVIDDSRARKLSTDLKRCTYYE TCATYGLNVERVFQDVAQKVVALRKKQQLAIGPCKSLPNSPSHSAVSAASIPAVHINQATNGGG SAFSDYSSSVPSTPSISQRELRIETIAASSTPTPIRKQSKRRSNIFTSRKGADPDREKKAAECK VDSIGSGRAIPIKQGILLKRSGKSLNKEWKKKYVTLCDNGLLTYHPSLHDYMQNIHGKEIDLLR TTVKVPGKRLPRATPSTAPGTSPRGANGLALERSNTQLGGTTETEESFEFVVVSLTGQTWHFEA STAEERELWVQSVQAQILASLQGCRSAKDKTRLGNQSTALAVQTVRTARGNSFCVDCEAPNPDW ASLNLGALMCIECSGIHRHLGAHLSRVRSLDLDDWPPELLAVMTAMGNALANSVWEGALDGYSK PGPEACREEKERWIRAKYEQKLFLAPLPSSDVPLGQQLLRAVVEDDLRLLVMLLAHGSKEEVNE TYGDGDGRTALHLSSAMANVVFTQLLIWYGVDVRSRDARGLTPLAYARRAGSQECADILIQHGC PGEGCGLAPTPNREPANGTNPSAELHRSPSIL hide sequence

RefSeq Acc Id:

XP_006236001 ⟸ XM_006235939

- Peptide Label:

isoform X2

- Sequence:

show sequence

MERGWPPGASCSGERPAVCRRALSVCDSLDLHSTSADRTAAALQAALCTAHEQPARPRSVCSGT
PGSAPSGARGLLLGLLRPRHGRRGPAPSERPGSPPPSPELSPAPTWRSRGPGERASRPRPTSMT
FLEVNRLELAATEAPGTGLGRTGSSGFLRGASLWSSQRWQVFRGGGSGRGAESPRRGLSALRKS
FSFRLRRGQEIRRSESGLLARPPRTRTRSDGDASSLGTFPSRRDLLGTDTPCPPPEPGRPRAAA
SLWKLLTSRFRRREPAPAAPLWSRRAAPAPGFLGAHSDSFVNSQEWTLSRSVPELKVGIVGNLS
SGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPELQFAAWVDAVVFVFS
LEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQDAISAANPRVIDDSRARKLSTDLKRCTYYE
TCATYGLNVERVFQDVAQKVVALRKKQQLAIGPCKSLPNSPSHSAVSAASIPAVHINQATNGGG
SAFSDYSSSVPSTPSISQRELRIETIAASSTPTPIRKQSKRRSNIFTSRKGADPDREKKAAECK
VDSIGSGRAIPIKQGILLKRSGKSLNKEWKKKYVTLCDNGLLTYHPSLHDYMQNIHGKEIDLLR
TTVKVPGKRLPRATPSTAPGTSPRGANGLALERSNTQLGGTTGRPHSASSASLHSERPHRSAWA
GSRPEGLHQRSCSISSTDQWSAAAALPASVQRPETEESFEFVVVSLTGQTWHFEASTAEERELW
VQSVQAQILASLQGCRSAKDKTRLGNQSTALAVQTVRTARGNSFCVDCEAPNPDWASLNLGALM
CIECSGIHRHLGAHLSRVRSLDLDDWPPELLAVMTAMGNALANSVWEGALDGYSKPGPEACREE
KERWIRAKYEQKLFLAPLPSSDVPLGQQLLRAVVEDDLRLLVMLLAHGSKEEVNETYGDGDGRT
ALHLSSAMANVVFTQLLIWYGVDVRSRDARGLTPLAYARRAGSQECADILIQHGCPGEGCGLAP
TPNREPANGTNPSAELHRSPSIL

hide sequence

RefSeq Acc Id:

XP_006236000 ⟸ XM_006235938

- Peptide Label:

isoform X1

- Sequence:

show sequence

MERGWPPGASCSGERPAVCRRALSVCDSLDLHSTSADRTAAALQAALCTAHEQPARPRSVCSGT
PGSAPSGARGLLLGLLRPRHGRRGPAPSERPGSPPPSPELSPAPTWRSRGPGERASRPRPTSMT
FLEVNRLELAATEAPGTGLGRTGSSGFLRGASLWSSQRWQVFRGGGSGRGAESPRRGLSALRKS
FSFRLRRGQEIRRSESGLLARPPRTRTRSDGDASSLGTFPSRRDLLGTDTPCPPPEPGRPRAAA
SLWKLLTSRFRRREPAPAAPLWSRRAAPAPGFLGAHSDSFVNSQEWTLSRSVPELKVGIVGNLS
SGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPELQFAAWVDAVVFVFS
LEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQDAISAANPRVIDDSRARKLSTDLKRCTYYE
TCATYGLNVERVFQDVAQKVVALRKKQQLAIGPCKSLPNSPSHSAVSAASIPAVHINQATNGGG
SAFSDYSSSVPSTPSISQRELRIETIAASSTPTPIRKQSKRRSNIFTSRKGADPDREKKAAECK
VDSIGSGRAIPIKQGILLKRSGKSLNKEWKKKYVTLCDNGLLTYHPSLHDYMQNIHGKEIDLLR
TTVKVPGKRLPRATPSTAPGTSPRGANGLALERSNTQLGGTTGRPHSASSASLHSERPHRSAWA
GSRPEGLHQRSCSISSTDQWSAAAALPASVQRPASGPAELLSSSPKLEPPPSPRSNRKKQRRKK
STGTPRPDGPNSAAEETEESFEFVVVSLTGQTWHFEASTAEERELWVQSVQAQILASLQGCRSA
KDKTRLGNQSTALAVQTVRTARGNSFCVDCEAPNPDWASLNLGALMCIECSGIHRHLGAHLSRV
RSLDLDDWPPELLAVMTAMGNALANSVWEGALDGYSKPGPEACREEKERWIRAKYEQKLFLAPL
PSSDVPLGQQLLRAVVEDDLRLLVMLLAHGSKEEVNETYGDGDGRTALHLSSAMANVVFTQLLI
WYGVDVRSRDARGLTPLAYARRAGSQECADILIQHGCPGEGCGLAPTPNREPANGTNPSAELHR
SPSIL

hide sequence

RefSeq Acc Id:	XP_006236005 ⟸ XM_006235943
- Peptide Label:	isoform X11
- UniProtKB:	A0A0G2JZ83 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNFQAGGGQSPQQQQSLAAPGGGGSGGGGAGGGGQFGGAGPGAGGGGPSQQLAGGPPQQFALSN SAAIRAEIQRFESVHPNIYAIYDLIERIEDLALQNQIREHVISIEDSFVNSQEWTLSRSVPELK VGIVGNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPELQFAAWV DAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQDAISAANPRVIDDSRARKLSTD LKRCTYYETCATYGLNVERVFQDVAQKVVALRKKQQLAIGPCKSLPNSPSHSAVSAASIPAVHI NQATNGGGSAFSDYSSSVPSTPSISQRELRIETIAASSTPTPIRKQSKRRSNIFTICATVSNFS STKRPFQLLPN hide sequence

RefSeq Acc Id:	XP_008760872 ⟸ XM_008762650
- Peptide Label:	isoform X12
- UniProtKB:	U6A022 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNFQAGGGQSPQQQQSLAAPGGGGSGGGGAGGGGQFGGAGPGAGGGGPSQQLAGGPPQQFALSN SAAIRAEIQRFESVHPNIYAIYDLIERIEDLALQNQIREHVISIEDSFVNSQEWTLSRSVPELK VGIVGNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPELQFAAWV DAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQDAISAANPRVIDDSRARKLSTD LKRCTYYETCATYGLNVERVFQDVAQKVVALRKKQQLAIGPCKSLPNSPSHSAVSAASIPAVHI NQATNGGGSAFSDYSSSVPSTPSISQRELRIETIAASSTPTPIRKQSKRRSNIFTSRKGADPDR EKKAAECKVDSIGSGRAIPIKQGILLKRSGKSLNKEWKKKYVTLCDNGLLTYHPSLHDYMQNIH GKEIDLLRTTVKVPGKRLPRATPSTAPGTSPRGANGLALERSSLSISPSSHTCPPLPSPASGPA ELLSSSPKLEPPPSPRSNRKKQRRKKSTGTPRPDGPNSAAEETEESFEFVVVSLTGQTWHFEAS TAEERELWVQSVQAQILASLQGCRSAKDKTRLGNQSTALAVQTVRTARGNSFCVDCEAPNPDWA SLNLGALMCIECSGIHRHLGAHLSRVRSLDLDDWPPELLAVMTAMGNALANSVWEGALDGYSKP GPEACREEKERWIRAKYEQKLFLAPLPSSDVPLGQQLLRAVVEDDLRLLVMLLAHGSKEEVNET YGDGDGRTALHLSSAMANVVFTQLLIWYGVDVRSRDARGLTPLAYARRAGSQECADILIQHGCP GEGCGLAPTPNREPANGTNPSAELHRSPSIL hide sequence

RefSeq Acc Id:	XP_017448171 ⟸ XM_017592682
- Peptide Label:	isoform X7
- UniProtKB:	G3V9Z5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MERGWPPGASCSGERPAVCRRALSVCDSLDLHSTSADRTAAALQAALCTAHEQPARPRSVCSGT PGSAPSGARGLLLGLLRPRHGRRGPAPSERPGSPPPSPELSPAPTWRSRGPGERASRPRPTSMT FLEVNRLELAATEAPGTGLGRTGSSGFLRGASLWSSQRWQVFRGGGSGRGAESPRRGLSALRKS FSFRLRRGQEIRRSESGLLARPPRTRTRSDGDASSLGTFPSRRDLLGTDTPCPPPEPGRPRAAA SLWKLLTSRFRRREPAPAAPLWSRRAAPAPGFLGAHSDSFVNSQEWTLSRSVPELKVGIVGNLS SGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPELQFAAWVDAVVFVFS LEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQDAISAANPRVIDDSRARKLSTDLKRCTYYE TCATYGLNVERVFQDVAQKVVALRKKQQLAIGPCKSLPNSPSHSAVSAASIPAVHINQATNGGG SAFSDYSSSVPSTPSISQRELRIETIAASSTPTPIRKQSKRRSNIFTICATVSNFSSTKRPFQL LPN hide sequence

Ensembl Acc Id:

ENSRNOP00000072199 ⟸ ENSRNOT00000084777

Ensembl Acc Id:

ENSRNOP00000070947 ⟸ ENSRNOT00000087120

Ensembl Acc Id:

ENSRNOP00000063846 ⟸ ENSRNOT00000064386

RefSeq Acc Id:	XP_038963676 ⟸ XM_039107748
- Peptide Label:	isoform X8
- UniProtKB:	A6K545 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963678 ⟸ XM_039107750
- Peptide Label:	isoform X10
- UniProtKB:	A6K545 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963677 ⟸ XM_039107749
- Peptide Label:	isoform X9
- UniProtKB:	A6K545 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000077364 ⟸ ENSRNOT00000097225

RefSeq Acc Id:	NP_001385782 ⟸ NM_001398853
- UniProtKB:	U6A022 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142296 ⟸ XM_063286226
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063142297 ⟸ XM_063286227
- Peptide Label:	isoform X6

Ensembl Acc Id:

ENSRNOP00000100965 ⟸ ENSRNOT00000171340

Protein Domains

Arf-GAP PH

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K2D4-F1-model_v2	AlphaFold	A0A0G2K2D4	1-812	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310751	AgrOrtholog
BioCyc Gene	G2FUF-46046	BioCyc
Ensembl Genes	ENSRNOG00000012764	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000064386	ENTREZGENE
	ENSRNOT00000064386.4	UniProtKB/TrEMBL
	ENSRNOT00000084777	ENTREZGENE
	ENSRNOT00000084777.3	UniProtKB/TrEMBL
	ENSRNOT00000087120	ENTREZGENE
	ENSRNOT00000087120.3	UniProtKB/TrEMBL
	ENSRNOT00000097225.2	UniProtKB/TrEMBL
	ENSRNOT00000171340	ENTREZGENE
	ENSRNOT00000171340.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.220.150	UniProtKB/TrEMBL
	1.25.40.20	UniProtKB/TrEMBL
	2.30.29.30	UniProtKB/TrEMBL
	3.40.50.300	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:9088856	IMAGE-MGC_LOAD
InterPro	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
	Arf-GAP_GTPase_ANK_PH	UniProtKB/TrEMBL
	ArfGAP	UniProtKB/TrEMBL
	ARFGAP/RecO	UniProtKB/TrEMBL
	ArfGAP_dom_sf	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	PH_type	UniProtKB/TrEMBL
	Pleckstrin_homology	UniProtKB/TrEMBL
	Small_GTPase	UniProtKB/TrEMBL
MGC_CLONE	MGC:187854	IMAGE-MGC_LOAD
NCBI Gene	362300	ENTREZGENE
PANTHER	ARF-GAP WITH GTPASE, ANK REPEAT AND PH DOMAIN-CONTAINING PROTEIN 3	UniProtKB/TrEMBL
	CENTAURIN-GAMMA-1A	UniProtKB/TrEMBL
Pfam	Ank_2	UniProtKB/TrEMBL
	ArfGap	UniProtKB/TrEMBL
	PF00169	UniProtKB/TrEMBL
	Ras	UniProtKB/TrEMBL
PhenoGen	Agap3	PhenoGen
PRINTS	RASTRNSFRMNG	UniProtKB/TrEMBL
	REVINTRACTNG	UniProtKB/TrEMBL
PROSITE	ANK_REP_REGION	UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/TrEMBL
	ARFGAP	UniProtKB/TrEMBL
	PH_DOMAIN	UniProtKB/TrEMBL
	RAB	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000012764	RatGTEx
SMART	ArfGap	UniProtKB/TrEMBL
	RAB	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
	SM00233	UniProtKB/TrEMBL
Superfamily-SCOP	ANK	UniProtKB/TrEMBL
	PH domain-like	UniProtKB/TrEMBL
	SSF52540	UniProtKB/TrEMBL
	SSF57863	UniProtKB/TrEMBL
UniProt	A0A0G2JZ83	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2K2D4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5Y9H3	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LL23_RAT	UniProtKB/TrEMBL
	A6K545	ENTREZGENE, UniProtKB/TrEMBL
	B0BN79_RAT	UniProtKB/TrEMBL
	G3V9Z5	ENTREZGENE, UniProtKB/TrEMBL
	U6A022	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-10-15	Agap3	ArfGAP with GTPase domain, ankyrin repeat and PH domain 3	Centg3	centaurin, gamma 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Centg3	centaurin, gamma 3	Centg3_predicted	centaurin, gamma 3 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Centg3_predicted	centaurin, gamma 3 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Annotations - KEGG (archival)