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Gene: Nol4 (nucleolar protein 4) Rattus norvegicus

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Symbol:

Nol4

Name:

nucleolar protein 4

RGD ID:

1310663

Description:

Orthologous to human NOL4 (nucleolar protein 4); INTERACTS WITH 1,3-dinitrobenzene; 6-propyl-2-thiouracil; bis(2-ethylhexyl) phthalate.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC307553

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NOL4 (nucleolar protein 4)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Nol4 (nucleolar protein 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Nol4 (nucleolar protein 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NOL4 (nucleolar protein 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NOL4 (nucleolar protein 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Nol4 (nucleolar protein 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NOL4 (nucleolar protein 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NOL4 (nucleolar protein 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Nol4 (nucleolar protein 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	KBTBD7 (kelch repeat and BTB domain containing 7)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	NOL4 (nucleolar protein 4)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Nol4 (nucleolar protein 4)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG46301	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG46301	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	nol4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	14,207,303 - 14,569,697 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	18	14,207,303 - 14,569,677 (-)	Ensembl				GRCr8
mRatBN7.2	18	13,932,499 - 14,294,873 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	13,932,510 - 14,296,286 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	18	14,118,579 - 14,480,839 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	14,906,228 - 15,268,504 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	14,175,243 - 14,543,815 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	13,658,260 - 14,016,713 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	13,658,271 - 14,016,713 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	18	13,441,528 - 13,801,153 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	18	14,312,224 - 14,718,842 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	18	13,911,298 - 14,272,965 (-)	NCBI		Celera
RGSC_v3.1	18	14,340,233 - 14,744,196 (-)	NCBI
Cytogenetic Map	18	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dichloroethane (ISO)

1,3-dinitrobenzene (EXP)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,4,4'-trichlorobiphenyl (ISO)

2-methylcholine (ISO)

2-palmitoylglycerol (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

belinostat (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (EXP,ISO)

bisphenol A (EXP,ISO)

Butylbenzyl phthalate (ISO)

cadmium dichloride (EXP)

carbamazepine (ISO)

chlorpyrifos (ISO)

coumarin (ISO)

dibutyl phthalate (ISO)

diethyl phthalate (ISO)

diisobutyl phthalate (ISO)

diisononyl phthalate (ISO)

dorsomorphin (ISO)

epoxiconazole (ISO)

ethanol (ISO)

fenvalerate (EXP)

folic acid (ISO)

fulvestrant (ISO)

ketamine (EXP)

maneb (ISO)

methimazole (EXP)

nitrofen (EXP)

O-methyleugenol (ISO)

p-chloromercuribenzoic acid (ISO)

panobinostat (ISO)

paraquat (ISO)

PCB138 (ISO)

perfluorooctanoic acid (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

titanium dioxide (ISO)

tributylstannane (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

nucleoplasm (IEA,ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Nol4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	14,207,303 - 14,569,697 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	18	14,207,303 - 14,569,677 (-)	Ensembl				GRCr8
mRatBN7.2	18	13,932,499 - 14,294,873 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	13,932,510 - 14,296,286 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	18	14,118,579 - 14,480,839 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	14,906,228 - 15,268,504 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	14,175,243 - 14,543,815 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	13,658,260 - 14,016,713 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	13,658,271 - 14,016,713 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	18	13,441,528 - 13,801,153 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	18	14,312,224 - 14,718,842 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	18	13,911,298 - 14,272,965 (-)	NCBI		Celera
RGSC_v3.1	18	14,340,233 - 14,744,196 (-)	NCBI
Cytogenetic Map	18	p12	NCBI

NOL4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	33,851,100 - 34,224,913 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	33,851,100 - 34,224,952 (-)	Ensembl			hg38	GRCh38
GRCh37	18	31,431,064 - 31,804,877 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	29,685,062 - 30,057,444 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	18	29,686,409 - 30,057,513	NCBI
Celera	18	28,239,387 - 28,611,397 (-)	NCBI		Celera
Cytogenetic Map	18	q12.1	NCBI
HuRef	18	28,290,445 - 28,662,648 (-)	NCBI		HuRef
CHM1_1	18	31,358,224 - 31,730,679 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	18	34,042,633 - 34,416,765 (-)	NCBI		T2T-CHM13v2.0

Nol4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	22,826,209 - 23,174,926 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	22,826,238 - 23,174,710 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	18	22,693,152 - 23,042,640 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	22,693,181 - 23,041,653 (-)	Ensembl			mm10	GRCm38
MGSCv37	18	22,851,656 - 23,200,154 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	18	22,836,416 - 23,181,666 (-)	NCBI		MGSCv36	mm8
Celera	18	23,176,162 - 23,536,179 (-)	NCBI		Celera
Cytogenetic Map	18	A2	NCBI
cM Map	18	11.96	NCBI

Nol4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	20,780,251 - 21,106,508 (-)	Ensembl
ChiLan1.0	NW_004955402	20,781,485 - 21,106,508 (-)	NCBI	ChiLan1.0	ChiLan1.0

NOL4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	51,224,685 - 51,606,604 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	36,917,282 - 37,299,195 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	27,054,678 - 27,435,085 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	30,646,179 - 31,025,952 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	30,646,179 - 31,026,620 (-)	Ensembl			panPan2	panpan1.1

NOL4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	55,617,119 - 56,007,790 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	55,618,123 - 56,006,041 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	54,919,320 - 55,440,480 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	55,454,410 - 55,977,017 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	55,586,330 - 55,976,997 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	55,142,088 - 55,663,223 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	55,162,627 - 55,684,834 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	55,459,157 - 55,980,811 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Nol4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	51,340,391 - 51,651,163 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936517	10,669,193 - 10,978,769 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936517	10,668,250 - 10,978,766 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NOL4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	117,631,227 - 118,087,992 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	6	117,631,631 - 118,088,026 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	109,982,552 - 110,275,172 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NOL4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	46,519,566 - 46,901,694 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	46,521,206 - 46,901,764 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666050	21,021,668 - 21,420,272 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nol4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624779	8,359,584 - 8,685,781 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624779	8,359,844 - 8,687,368 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Nol4
2503 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	75
Count of miRNA genes:	67
Interacting mature miRNAs:	67
Transcripts:	ENSRNOT00000041125
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2301410	Bp317	Blood pressure QTL 317		0.004	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	12219237	26822399	Rat
2301409	Cm70	Cardiac mass QTL 70		0.001	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	18	7065728	52065728	Rat
61382	Bp46	Blood pressure QTL 46	18.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	12216684	31644508	Rat
12904716	Am21	Aortic mass QTL 21		0.005	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	18	7065728	52065728	Rat
8552968	Pigfal19	Plasma insulin-like growth factor 1 level QTL 19	11.4		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	18	1	26032889	Rat
12904714	Cm131	Cardiac mass QTL 131		0.002	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	18	7065728	52065728	Rat
12904715	Cm132	Cardiac mass QTL 132		0.001	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	18	7065728	52065728	Rat
1331781	Scl28	Serum cholesterol level QTL 28	3.995		blood HDL cholesterol amount (VT:0000184)	serum high density lipoprotein cholesterol level (CMO:0000361)	18	1	25071266	Rat
6903356	Bp354	Blood pressure QTL 354	4.6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	1	15642423	Rat
6903345	Bp349	Blood pressure QTL 349	3.9		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	3917226	48917226	Rat
6903347	Bp350	Blood pressure QTL 350	4.4		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	1	31610627	Rat
2312568	Glom21	Glomerulus QTL 21	2	0.005	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	18	5460455	42690191	Rat
6903349	Bp351	Blood pressure QTL 351	3.5		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	3917226	48917226	Rat
6903351	Bp352	Blood pressure QTL 352	3.3		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	3917226	48917226	Rat
1331766	Bp236	Blood pressure QTL 236	3.022		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	1	31610627	Rat
631264	Scl22	Serum cholesterol level QTL 22	6.2		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	18	12216684	31644508	Rat
2325839	Bp348	Blood pressure QTL 348		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	1	44930869	Rat
12904680	Bw189	Body weight QTL 189		0.019	body mass (VT:0001259)	body weight (CMO:0000012)	18	12219237	26822399	Rat
2293708	Bss46	Bone structure and strength QTL 46	8.8	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	18	12066482	57066482	Rat
1641910	Colcr3	Colorectal carcinoma resistance QTL 3	5.02	0.000007	intestine integrity trait (VT:0010554)	poorly differentiated malignant colorectal tumor number (CMO:0002076)	18	1	25022372	Rat
12904693	Am20	Aortic mass QTL 20		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	18	12219237	26822399	Rat
1578667	Bss21	Bone structure and strength QTL 21	3.5		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	18	12066482	85493247	Rat
12904695	Kidm73	Kidney mass QTL 73		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	18	12219237	26822399	Rat
2312598	Bp340	Blood pressure QTL 340		0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	3811902	30809809	Rat
12904689	Cm128	Cardiac mass QTL 128		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	18	12219237	26822399	Rat
12904690	Cm129	Cardiac mass QTL 129		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	18	12219237	26822399	Rat
2300180	Bmd67	Bone mineral density QTL 67	4.8	0.0001	femur mineral mass (VT:0010011)	bone mineral density (CMO:0001226)	18	1	34566578	Rat
12904691	Cm130	Cardiac mass QTL 130		0.001	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	18	12219237	26822399	Rat
9590248	Scort10	Serum corticosterone level QTL 10	19.71	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	18	1	26032889	Rat
2299160	Iddm35	Insulin dependent diabetes mellitus QTL 35	2.79		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	18	4482648	49482648	Rat
1331753	Bp231	Blood pressure QTL 231	3.643		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	1	54490981	Rat
1578661	Bss20	Bone structure and strength QTL 20	3.7		femur morphology trait (VT:0000559)	femoral neck cross-sectional area (CMO:0001697)	18	12066482	85493247	Rat
11565454	Kidm59	Kidney mass QTL 59		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	18	7065728	52065728	Rat
2293661	Bss50	Bone structure and strength QTL 50	4.64	0.0003	lumbar vertebra size trait (VT:0010518)	lumbar vertebra trabecular cross-sectional area (CMO:0001692)	18	1	34566578	Rat
61375	Bp41	Blood pressure QTL 41	2.4		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	18	4307354	49307354	Rat

Markers in Region

D18Rat75

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_5.0	18	13,553,288 - 13,553,458	NCBI	Rnor5.0
Rnor_5.0	18	13,553,288 - 13,553,562	NCBI	Rnor5.0
RGSC_v3.4	18	14,450,293 - 14,450,566	RGD	RGSC3.4
RGSC_v3.4	18	14,450,293 - 14,450,462	RGD	RGSC3.4
Celera	18	14,023,452 - 14,023,701	UniSTS
RGSC_v3.1	18	14,476,939 - 14,477,212	RGD
RH 3.4 Map	18	159.6	UniSTS
RH 3.4 Map	18	159.6	RGD
RH 2.0 Map	18	725.8	RGD
SHRSP x BN Map	18	5.85	RGD
FHH x ACI Map	18	10.5499	RGD
Cytogenetic Map	18	p12	UniSTS

D18Got17

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	14,200,465 - 14,200,632 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	13,925,372 - 13,925,538	NCBI	Rnor6.0
Rnor_5.0	18	13,708,383 - 13,708,549	UniSTS	Rnor5.0
RGSC_v3.4	18	14,619,985 - 14,620,152	RGD	RGSC3.4
RGSC_v3.4	18	14,619,986 - 14,620,152	UniSTS	RGSC3.4
Celera	18	14,179,060 - 14,179,226	UniSTS
RGSC_v3.1	18	14,646,632 - 14,646,798	RGD
RH 3.4 Map	18	154.3	UniSTS
RH 3.4 Map	18	154.3	RGD
RH 2.0 Map	18	735.1	RGD
Cytogenetic Map	18	p12	UniSTS

BB384708

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	13,932,804 - 13,932,905 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	13,658,566 - 13,658,666	NCBI	Rnor6.0
Rnor_5.0	18	13,441,831 - 13,441,931	UniSTS	Rnor5.0
RGSC_v3.4	18	14,312,519 - 14,312,619	UniSTS	RGSC3.4
Celera	18	13,911,593 - 13,911,693	UniSTS
Cytogenetic Map	18	p12	UniSTS

RH142458

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	14,295,474 - 14,295,729 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	14,017,334 - 14,017,588	NCBI	Rnor6.0
Rnor_5.0	18	13,801,754 - 13,802,008	UniSTS	Rnor5.0
RGSC_v3.4	18	14,719,579 - 14,719,833	UniSTS	RGSC3.4
Celera	18	14,274,119 - 14,274,373	UniSTS
RH 3.4 Map	18	150.7	UniSTS
Cytogenetic Map	18	p12	UniSTS

AU047300

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	14,289,235 - 14,289,432 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	14,011,089 - 14,011,287	NCBI	Rnor6.0
Rnor_5.0	18	13,795,509 - 13,795,707	UniSTS	Rnor5.0
RGSC_v3.4	18	14,713,218 - 14,713,416	UniSTS	RGSC3.4
Celera	18	14,267,341 - 14,267,539	UniSTS
Cytogenetic Map	18	p12	UniSTS

RH140952

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	14,179,275 - 14,179,492 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	13,903,992 - 13,904,208	NCBI	Rnor6.0
Rnor_5.0	18	13,686,964 - 13,687,180	UniSTS	Rnor5.0
RGSC_v3.4	18	14,598,173 - 14,598,389	UniSTS	RGSC3.4
Celera	18	14,157,870 - 14,158,086	UniSTS
RH 3.4 Map	18	167.4	UniSTS
Cytogenetic Map	18	q12.3	UniSTS
Cytogenetic Map	18	p12	UniSTS

BF390037

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	14,141,502 - 14,141,657 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	13,866,869 - 13,867,023	NCBI	Rnor6.0
Rnor_5.0	18	13,649,841 - 13,649,995	UniSTS	Rnor5.0
RGSC_v3.4	18	14,561,511 - 14,561,665	UniSTS	RGSC3.4
Celera	18	14,120,595 - 14,120,749	UniSTS
RH 3.4 Map	18	154.4	UniSTS
Cytogenetic Map	18	p12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
13	3	11	141	42	27	18	11	18	2	133	43	3	127	56	73	9	16	16

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107401	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001415694	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096914	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096915	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096917	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096918	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000041125 ⟹ ENSRNOP00000038969

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	14,207,303 - 14,569,677 (-)	Ensembl
mRatBN7.2 Ensembl	18	13,932,510 - 14,294,858 (-)	Ensembl
Rnor_6.0 Ensembl	18	13,658,271 - 14,016,713 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000103441 ⟹ ENSRNOP00000090479

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	14,207,314 - 14,566,875 (-)	Ensembl
mRatBN7.2 Ensembl	18	13,932,510 - 14,296,286 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000131803 ⟹ ENSRNOP00000107260

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	14,207,314 - 14,569,666 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000154299 ⟹ ENSRNOP00000104273

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	14,235,513 - 14,569,677 (-)	Ensembl

RefSeq Acc Id:

NM_001107401 ⟹ NP_001100871

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	14,207,314 - 14,569,666 (-)	NCBI
mRatBN7.2	18	13,932,510 - 14,294,858 (-)	NCBI
Rnor_6.0	18	13,658,271 - 14,016,713 (-)	NCBI
Rnor_5.0	18	13,441,528 - 13,801,153 (-)	NCBI
RGSC_v3.4	18	14,312,224 - 14,718,842 (-)	RGD
Celera	18	13,911,298 - 14,272,965 (-)	RGD

Sequence:

show sequence

GAGGTTCAGTGTGTGGAGCTGCTCGCGCAGCGCCCGGGCTGTCAGTCCGAGCTGGGGCCGCCGC
GAGACCTTCCAAGAGACGCGCACCCCCGCGCCCCGCACACCCTCGCTCGACCACACACACACGC
ACACGCTCAGCCTGGCCGCGCAGGAGCCACTGAGCAGCCCGAGAGCTCCGGGACCGGCTGCGGG
CAGAGGAGTGAGCCGGGTTCCCACTGGGGCTTTCGCCGAGGAGACCGCAGCGAGCTTCCCGGTG
GGCTCGGACCCCTCAGGAACACGGCGAGGGCCATCCGGCTGGTTAAGCCGATCCCTGCGACCCG
CGCTGGCCTCGGCAGGGAGTGCAGTAAAGAGGAGCGGCTGCAGCTAGCAGGACTGGAACTCCCC
TGGTTCCAGCGCCGCCGCGACACACGGGTGGAAATCCTAATGGAGGGATCGCTTACTTCCTTTG
CTTGGGAAAATCGTCAGGAGCAACTCCGATTTGGCTCCTCTGAGCATCGGAGGGGGGTCCATGA
CGTGACAGGGGGAAAATAGACAACTGAAACCTCCCGCGTGAACTGCAAACTATAACCCAGGGAG
AGGGAAGAACTGCTTTCTGCATTTTAATTTCACGCAAAAAAGGTTCAAGTGTCGTGCGGTAAAC
TTATTTCCATGTCTTGTACCCACTTCAGCAGAACCCAGAGGGTCCTATCTTGGGGACAGCATCA
GTCCGAAGAGCTCTAGCCAGCGGCCTGTCTTCCTGCTCCCACATTCCCCGGACTGCATCCCTGT
CTGGGGTACTCCATCTATCCTATAGAGCTATGGCCAGGTATCTATGAATACTGGGCGAATTTCT
GAAACCCAACTCTTACAACCTACCTGCGTGGCTGGAATTTCACCTAATACATCTGAAGAAATGG
CATTTTGAGTCGTTTTTAGGATACCTTCTTTAAAATTCATGTAAAACAGGATCTGATAGGCTTA
CCAACATGACAGGTAAGAACTTTCTGGCTCTCTAGTCCTGTCGCAGAGGAGGCCCAGGTTGAGC
AGGAGAGAGAGTCCAGGGACCCGTGTGCCCACTGAGGCTCATCAGCAGAGGGCTGCTTTTGCTA
GAGGCGCAGCCCTGGCTCCTGGACCATCCGCTGGGGAAGCTTCTGGGGCGCGCGCCAGGAGATT
GCCTTGCGCTCCACCTGCCCTGCCCTGGACACAGCCCGGGAGGCGAGGCATCGAGGGACCACCT
CAAGTCAATATTGGGATTTTTAATAAACCAAGGAATGGGGTTTTAATTATTCAGAAACCCAGCT
CCTCTGGGCCAGATGCTGTTGGGATGGTGCTGGTCACACAGTATTAAAGAGACCGACCGCTAAG
GGGACTAGAAAAGCGTCCGAGACATCCTTTGCAATTAGGAACGAGCCAGACTTGGTAGCACGGG
GCATTGATTGCTGGTGCCCATCCGGACCCTCCTCCTCTCTCCCTGATCCTCCCCCCACCCCATC
GGAGGCAGCTCCCGCGGCTCGGCCAGGACCTCGCGTCCTCGCATCGTGGTCTGGGCTGCGTATT
TCATGAGCCCAGGGTGAACAGGTGCGAAGTGCGCTGGGAGCATCCGGCCCACGGCAGCGCGGGG
AACATGGAGAGCGAGCGCGACATGTACCGCCAGTTTCAGGACTGGTGCCTTAGGACTTACGGGG
ACTCAGGCAAGACCAAGACGGTGACCCGTAAGAAATACGAGCGGATTGTCCAGCTCCTCAACGG
CTCAGAGTCAAGCTCCACCGACAATGCCAAATTTAAATTCTGGGTCAAATCGAAGGGTTTCCAG
CTGGGCCAGCCGGATGAGGTCCGCGGGGGAGGCGGCGGCGCCAAGCAAGTGCTCTTCGTGCGGG
TCAAGACCACGGATGGCGTAGGAGTTGATGAGAAGCTTTCATTACGGCGAGTGGCTGTGGTTGA
AGATTTCTTTGACATCATCTATTCCATGCATGTGGAGACAGGGCCGAATGGAGAACAAATCCGA
AAACACGCTGGGCAGAAGAGAACTTACAAAGCAATTTCAGAGAGCTACGCCTTCCTACCAAGAG
AAGCGGTGACGCGGTTTCTAATGAGCTGTTCCGAGTGCCAGAAAAGAATGCACTTGAACCCAGA
TGGGACCGATCACAAAGATAATGGGAAGCCTCCTACCCTGGTGACCAGCATGATCGACTACAAC
ATGCCAATCACCATGGCGTACATGAAGCACATGAAACTGCAGCTGCTAAACTCACAGCAAGATG
AGGATGAAAGTTCAATAGAGAGTGATGAATTTGATATGAGTGATTCAACTCGGATGTCCGCCGT
GAACTCTGACCTTAGCTCCAATCTGGAAGAAAGAGTGCAAAGTCCCCAGACTGCCCAGGGCCAG
CAGGATGATGACTCTGCTGCAGAGAGCTCTAATGGCAATGAGACTCTGGGGCACAGTTCAGTTG
CTTCCGGGGGAGCACATGGCAGGGAGCCTGGGGACTCCAGCAGTGATGGCAAAACGGGGCTGGA
GCAGGAAGAACAGCCACTGAACCTGAGTGACAGTCCCCGCTCTGCACAGCTGACTTCGGAATAC
AGGGTAGAGGACCAAGGCAGTAATGGGAAAAACAAGTATAAGAATCTTCTAATCTCCGACCTCA
AGATGGAAAGAGAGGCAAGAGAAAATGGAAGCAAGTCTCCAGCCCACAGCTACTCCAGCTATGA
CTCTGGCAAAAATGAGGGTGTCGATCGAGGCGCAGAGGACCTGTCCCTCAGCAGGGGAGACGAA
GACGAAGATGAACATGACGAGCATGAGGATTCTGAGAAGGTGAACGAGAGCGATGGCGTAGAAG
CTGAGAGGCTGAAAGCTTTCAACTCTCGACCTATCCCTTCCCACCTTACTTCAGCAGTTGCAGA
GAGTATCTTGGCTTCAGCCTGTGAAAGCGAGAGTAGAAACGCTGCCAAGAGGATGCGTCTGGAT
AAAACCCAGGACGAAGCTACTCCTGCTGACAAACAGTGCAAGCCTGAGGCAGCCCAGGCCACCT
ACTCAACGTCTACTGTTCCAGGCTCCCAGGAGGTATTGTACATCAATGGCAATGGGACCTACAG
TTACCATAGTTACCGAGGACTAGGAGGAGGACTGCTAAACCTGAATGACACTTCTAGTAGTGGA
CCCACAGATCTGAGCATGAAGAGGCAGCTGGCGCCTGGCTCAGGATCTTCCAGCAGTTCAAACC
CCAGACCTCAGCTCAGTCCGACAGAAATCAACGCCGTGAGACAGCTTGTCGCCGGGTATCGAGA
ATCGGCTGCATTTTTATTGCGTTCTGCAGATGAACTGGAAAATCTCATTTTACAACAGAACTGA
GGCCAACGATGTCTGTACTCACTGGGTTCTAAATTTGCGGTTTCCACTAATGACACTTGATTTT
CCAGCAGAGAGACTCCTAGGCTTGCTCCACAGTCTTTTAAGAGAAGCGTTTCCATCATGCCATG
TTGTCCTTGATCCATACACTGGTGTGTTGAGGAGCGTCACAGGAACTCTGGTCTTGAAGTACTT
GAGATGCTCAAGTGTGCCCAGCCTGTTGCTTTTGTTTTAGTGTGTCAGCATAAATATCATAAGC
AATTTTTTAAAAGGCTGCATATTCTCAATTCAAGGATTAAAAATGAAGAAGCTCATGGAATAAA
AAAAAAGCTCAAGATCCAACTGAAATATTAGTGGAATTTTCTACTGACTCATTGGACTGAAAGC
TGAAGTATCTGGGGGGAAAAAGCCAAATTTCTTATTGCTACAGGATATGACAACAATGAAAAGG
ATCTTGTATTTTAAAAGAAAAAAATGTAATTTTTATAAAAAGAAAACTTGTTTTTCATTCAAAA
TGGTCATTTTTACTTTGGTAACTTTTTCATAGGTTCTAAAAAGAAAACTGTTTTTGAGAAACTA
TTGTAAGTACCCTTTCCGCATCCCTTTTGCCTTCTCCTCTTTCCAAATTCTTTCTACAAAAGAA
AAATAACACTCGATGCTGGAAAACCCTTTGCCTACTTCCTGGAAGTCGACCCATCAGGAACTAC
TTCCAAGAGATGCCTCCATTTCTGTCCTTACGCCAGTCTCAAAACGCCCACGCCCCACGGCAGC
TTACCACAGCAGTTTTCATCCCAGAATTTTCTAAACATTATAAAAAGACGTGTTGAAAACAAAA
CCCCAACACATCGCTGCGTTCCCCAGAGCTGCTTGCCCCAGGCTGTGCTACCCAGCAAGCCTCC
AGAGCAGCGACTCGATGTAGATGACTGAATGTTACTGAGGTTGCAAGTGACAATCTTAAACTTT
GCACTCTTGTATGTACTTCTCATTTCTTTTGGAAACAGTTTCCAGGAAAGGCTGTTGTTGTGTC
TCCTGGTATGATTTGTAGCATTTAAGTTTTTGTTCTTTTTTATTTTTATTTATTTATTTTTTTA
AATTGAGAGCTCTCAGCAGATAGAGCTAGATCTGAACAACGAACTCTCTCTCCCCTCCGTCTCC
CAGGCTCGGCCATTTTCTCCACTTCTAGTGTTAGACACAACCCTGAGTGGTATTTTCTGTGCAC
TGAAGCAAGCCTATTTTTAAGATATTTAAGGAGAAGTACTTTAGTTCATACTTGTACTATTTTC
CTTTCTGTTGTTTAGCTTCGGTTGAATTACAAATTCTTTGTGCATTCTTGAATTTGCCTTATTT
TATGTAAAATCTATGTCATTCGGGTTTTGACAATGAGTTGAAGGCATTAGTGATATCCCTTACC
TTCTTGTTACATCTAGTTTTCCAAGTACTGACTGTGATTGTGACCAGGTAATGTGCACTTTTTC
TTGTAACTGTGGACATTGCTATGCTTTTTTCTTCTTGTGTTTCTAGAATTATTGTTCCTTACAG
TTACGTAAACAAAAATACAAAAACAACAAAAAAATTTTGTGATACTGTTGGTGAATATAATGTG
AAAATCTTATTGAAATATGAGTATTTTGGAAATACATAGATGCACAAACATCTTTTAAAGGTGT
GAATTTAGAGTTTGCTTATTTAATGAAAATTTAAAAATTTGAGGGCTGGTATAAGTTTTCTCTG
TTTTTGTTTGGTTTAATAAAAGATTTCTGTGT

hide sequence

RefSeq Acc Id:

NM_001415694 ⟹ NP_001402623

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	14,207,303 - 14,569,677 (-)	NCBI
mRatBN7.2	18	13,932,499 - 14,294,869 (-)	NCBI

RefSeq Acc Id:

XM_017600973 ⟹ XP_017456462

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	14,207,303 - 14,567,737 (-)	NCBI
mRatBN7.2	18	13,932,499 - 14,292,941 (-)	NCBI
Rnor_6.0	18	13,658,260 - 14,013,896 (-)	NCBI

Sequence:

show sequence

CACCTAGAGAGAGTATGAGGAGCTATCTGACACCCTTTGTATTTTTTGTCTCGCTTTGGGATTC
GTTGAGCTTTACTCCTTCCCCCCACACTCCCCCCCCTCACTTTTACTGGCGACTGTTTCCCAGT
GCACAGCTCCCTGAGGATGTTAGAAAGAAGGTTTCTAGAGGAGAAGGCTATGGTCTCTCTAAGG
TGCATGATATCGGAGATATATGCAAGAAAGACTCTTCCGAGCTGCGTCTGGATGACTCTCAGGA
TGGCGTAGGAGTTGATGAGAAGCTTTCATTACGGCGAGTGGCTGTGGTTGAAGATTTCTTTGAC
ATCATCTATTCCATGCATGTGGAGACAGGGCCGAATGGAGAACAAATCCGAAAACACGCTGGGC
AGAAGAGAACTTACAAAGCAATTTCAGAGAGCTACGCCTTCCTACCAAGAGAAGCGGTGACGCG
GTTTCTAATGAGCTGTTCCGAGTGCCAGAAAAGAATGCACTTGAACCCAGATGGGACCGATCAC
AAAGATAATGGGAAGCCTCCTACCCTGGTGACCAGCATGATCGACTACAACATGCCAATCACCA
TGGCGTACATGAAGCACATGAAACTGCAGCTGCTAAACTCACAGCAAGATGAGGATGAAAGTTC
AATAGAGAGTGATGAATTTGATATGAGTGATTCAACTCGGATGTCCGCCGTGAACTCTGACCTT
AGCTCCAATCTGGAAGAAAGAGTGCAAAGTCCCCAGACTGCCCAGGGCCAGCAGGATGATGACT
CTGCTGCAGAGAGCTCTAATGGCAATGAGACTCTGGGGCACAGTTCAGTTGCTTCCGGGGGAGC
ACATGGCAGGGAGCCTGGGGACTCCAGCAGTGATGGCAAAACGGGGCTGGAGCAGGAAGAACAG
CCACTGAACCTGAGTGACAGTCCCCGCTCTGCACAGCTGACTTCGGAATACAGGGTAGAGGACC
AAGGCAGTAATGGGAAAAACAAGTATAAGAATCTTCTAATCTCCGACCTCAAGATGGAAAGAGA
GGCAAGAGAAAATGGAAGCAAGTCTCCAGCCCACAGCTACTCCAGCTATGACTCTGGCAAAAAT
GAGGGTGTCGATCGAGGCGCAGAGGACCTGTCCCTCAGCAGGGGAGACGAAGACGAAGATGAAC
ATGACGAGCATGAGGATTCTGAGAAGGTGAACGAGAGCGATGGCGTAGAAGCTGAGAGGCTGAA
AGCTTTCAACATGTTTGTCAGGCTGTTTGTAGATGAAAACTTGGACCGAATGGTCCCAATCTCT
AAGCAGCCCAAAGAAAAGATCCAGGCTATCATTGACTCATGCAGGCGACAGTTCCCTGAGTATC
AAGAGCGCGCCAGAAAGCGTATCCGTACTTACCTCAAGTCCTGCAGGCGGATGAAGAGAAGTGG
TTTTGAGATGTCTCGACCTATCCCTTCCCACCTTACTTCAGCAGTTGCAGAGAGTATCTTGGCT
TCAGCCTGTGAAAGCGAGAGTAGAAACGCTGCCAAGAGGATGCGTCTGGATAAAACCCAGGACG
AAGCTACTCCTGCTGACAAACAGTGCAAGCCTGAGGCAGCCCAGGCCACCTACTCAACGTCTAC
TGTTCCAGGCTCCCAGGAGGTATTGTACATCAATGGCAATGGGACCTACAGTTACCATAGTTAC
CGAGGACTAGGAGGAGGACTGCTAAACCTGAATGACACTTCTAGTAGTGGACCCACAGATCTGA
GCATGAAGAGGCAGCTGGCGCCTGGCTCAGGATCTTCCAGCAGTTCAAACCCCAGACCTCAGCT
CAGTCCGACAGAAATCAACGCCGTGAGACAGCTTGTCGCCGGGTATCGAGAATCGGCTGCATTT
TTATTGCGTTCTGCAGATGAACTGGAAAATCTCATTTTACAACAGAACTGAGGCCAACGATGTC
TGTACTCACTGGGTTCTAAATTTGCGGTTTCCACTAATGACACTTGATTTTCCAGCAGAGAGAC
TCCTAGGCTTGCTCCACAGTCTTTTAAGAGAAGCGTTTCCATCATGCCATGTTGTCCTTGATCC
ATACACTGGTGTGTTGAGGAGCGTCACAGGAACTCTGGTCTTGAAGTACTTGAGATGCTCAAGT
GTGCCCAGCCTGTTGCTTTTGTTTTAGTGTGTCAGCATAAATATCATAAGCAATTTTTTAAAAG
GCTGCATATTCTCAATTCAAGGATTAAAAATGAAGAAGCTCATGGAATAAAAAAAAAGCTCAAG
ATCCAACTGAAATATTAGTGGAATTTTCTACTGACTCATTGGACTGAAAGCTGAAGTATCTGGG
GGGAAAAAGCCAAATTTCTTATTGCTACAGGATATGACAACAATGAAAAGGATCTTGTATTTTA
AAAGAAAAAAATGTAATTTTTATAAAAAGAAAACTTGTTTTTCATTCAAAATGGTCATTTTTAC
TTTGGTAACTTTTTCATAGGTTCTAAAAAGAAAACTGTTTTTGAGAAACTATTGTAAGTACCCT
TTCCGCATCCCTTTTGCCTTCTCCTCTTTCCAAATTCTTTCTACAAAAGAAAAATAACACTCGA
TGCTGGAAAACCCTTTGCCTACTTCCTGGAAGTCGACCCATCAGGAACTACTTCCAAGAGATGC
CTCCATTTCTGTCCTTACGCCAGTCTCAAAACGCCCACGCCCCACGGCAGCTTACCACAGCAGT
TTTCATCCCAGAATTTTCTAAACATTATAAAAAGACGTGTTGAAAACAAAACCCCAACACATCG
CTGCGTTCCCCAGAGCTGCTTGCCCCAGGCTGTGCTACCCAGCAAGCCTCCAGAGCAGCGACTC
GATGTAGATGACTGAATGTTACTGAGGTTGCAAGTGACAATCTTAAACTTTGCACTCTTGTATG
TACTTCTCATTTCTTTTGGAAACAGTTTCCAGGAAAGGCTGTTGTTGTGTCTCCTGGTATGATT
TGTAGCATTTAAGTTTTTGTTCTTTTTTATTTTTATTTATTTATTTTTTTAAATTGAGAGCTCT
CAGCAGATAGAGCTAGATCTGAACAACGAACTCTCTCTCCCCTCCGTCTCCCAGGCTCGGCCAT
TTTCTCCACTTCTAGTGTTAGACACAACCCTGAGTGGTATTTTCTGTGCACTGAAGCAAGCCTA
TTTTTAAGATATTTAAGGAGAAGTACTTTAGTTCATACTTGTACTATTTTCCTTTCTGTTGTTT
AGCTTCGGTTGAATTACAAATTCTTTGTGCATTCTTGAATTTGCCTTATTTTATGTAAAATCTA
TGTCATTCGGGTTTTGACAATGAGTTGAAGGCATTAGTGATATCCCTTACCTTCTTGTTACATC
TAGTTTTCCAAGTACTGACTGTGATTGTGACCAGGTAATGTGCACTTTTTCTTGTAACTGTGGA
CATTGCTATGCTTTTTTCTTCTTGTGTTTCTAGAATTATTGTTCCTTACAGTTACGTAAACAAA
AATACAAAAACAACAAAAAAATTTTGTGATACTGTTGGTGAATATAATGTGAAAATCTTATTGA
AATATGAGTATTTTGGAAATACATAGATGCACAAACATCTTTTAAAGGTGTGAATTTAGAGTTT
GCTTATTTAATGAAAATTTAAAAATTTGAGGGCTGGTATAAGTTTTCTCTGTTTTTGTTTGGTT
TAATAAAAGATTTCTGTGTTAAAGAAACAA

hide sequence

RefSeq Acc Id:

XM_017600974 ⟹ XP_017456463

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	14,207,303 - 14,473,726 (-)	NCBI
mRatBN7.2	18	13,932,499 - 14,198,915 (-)	NCBI
Rnor_6.0	18	13,658,260 - 13,923,807 (-)	NCBI

Sequence:

show sequence

TCTATTCCATGCATGTGGAGACAGGGCCGAATGGAGAACAAATCCGAAAACACGCTGGGCAGAA
GAGAACTTACAAAGCAATACAGAAAAATGTGTGAAATGCTCAAAGTTTCAAATACAGATTTCAG
AGAGCTACGCCTTCCTACCAAGAGAAGCGGTGACGCGGTTTCTAATGAGCTGTTCCGAGTGCCA
GAAAAGAATGCACTTGAACCCAGATGGGACCGATCACAAAGATAATGGGAAGCCTCCTACCCTG
GTGACCAGCATGATCGACTACAACATGCCAATCACCATGGCGTACATGAAGCACATGAAACTGC
AGCTGCTAAACTCACAGCAAGATGAGGATGAAAGTTCAATAGAGAGTGATGAATTTGATATGAG
TGATTCAACTCGGATGTCCGCCGTGAACTCTGACCTTAGCTCCAATCTGGAAGAAAGAGTGCAA
AGTCCCCAGACTGCCCAGGGCCAGCAGGATGATGACTCTGCTGCAGAGAGCTCTAATGGCAATG
AGACTCTGGGGCACAGTTCAGTTGCTTCCGGGGGAGCACATGGCAGGGAGCCTGGGGACTCCAG
CAGTGATGGCAAAACGGGGCTGGAGCAGGAAGAACAGCCACTGAACCTGAGTGACAGTCCCCGC
TCTGCACAGCTGACTTCGGAATACAGGGTAGAGGACCAAGGCAGTAATGGGAAAAACAAGTATA
AGAATCTTCTAATCTCCGACCTCAAGATGGAAAGAGAGGCAAGAGAAAATGGAAGCAAGTCTCC
AGCCCACAGCTACTCCAGCTATGACTCTGGCAAAAATGAGGGTGTCGATCGAGGCGCAGAGGAC
CTGTCCCTCAGCAGGGGAGACGAAGACGAAGATGAACATGACGAGCATGAGGATTCTGAGAAGG
TGAACGAGAGCGATGGCGTAGAAGCTGAGAGGCTGAAAGCTTTCAACATGTTTGTCAGGCTGTT
TGTAGATGAAAACTTGGACCGAATGGTCCCAATCTCTAAGCAGCCCAAAGAAAAGATCCAGGCT
ATCATTGACTCATGCAGGCGACAGTTCCCTGAGTATCAAGAGCGCGCCAGAAAGCGTATCCGTA
CTTACCTCAAGTCCTGCAGGCGGATGAAGAGAAGTGGTTTTGAGATGTCTCGACCTATCCCTTC
CCACCTTACTTCAGCAGTTGCAGAGAGTATCTTGGCTTCAGCCTGTGAAAGCGAGAGTAGAAAC
GCTGCCAAGAGGATGCGTCTGGATAAAACCCAGGACGAAGCTACTCCTGCTGACAAACAGTGCA
AGCCTGAGGCAGCCCAGGCCACCTACTCAACGTCTACTGTTCCAGGCTCCCAGGAGGTATTGTA
CATCAATGGCAATGGGACCTACAGTTACCATAGTTACCGAGGACTAGGAGGAGGACTGCTAAAC
CTGAATGACACTTCTAGTAGTGGACCCACAGATCTGAGCATGAAGAGGCAGCTGGCGCCTGGCT
CAGGATCTTCCAGCAGTTCAAACCCCAGACCTCAGCTCAGTCCGACAGAAATCAACGCCGTGAG
ACAGCTTGTCGCCGGGTATCGAGAATCGGCTGCATTTTTATTGCGTTCTGCAGATGAACTGGAA
AATCTCATTTTACAACAGAACTGAGGCCAACGATGTCTGTACTCACTGGGTTCTAAATTTGCGG
TTTCCACTAATGACACTTGATTTTCCAGCAGAGAGACTCCTAGGCTTGCTCCACAGTCTTTTAA
GAGAAGCGTTTCCATCATGCCATGTTGTCCTTGATCCATACACTGGTGTGTTGAGGAGCGTCAC
AGGAACTCTGGTCTTGAAGTACTTGAGATGCTCAAGTGTGCCCAGCCTGTTGCTTTTGTTTTAG
TGTGTCAGCATAAATATCATAAGCAATTTTTTAAAAGGCTGCATATTCTCAATTCAAGGATTAA
AAATGAAGAAGCTCATGGAATAAAAAAAAAGCTCAAGATCCAACTGAAATATTAGTGGAATTTT
CTACTGACTCATTGGACTGAAAGCTGAAGTATCTGGGGGGAAAAAGCCAAATTTCTTATTGCTA
CAGGATATGACAACAATGAAAAGGATCTTGTATTTTAAAAGAAAAAAATGTAATTTTTATAAAA
AGAAAACTTGTTTTTCATTCAAAATGGTCATTTTTACTTTGGTAACTTTTTCATAGGTTCTAAA
AAGAAAACTGTTTTTGAGAAACTATTGTAAGTACCCTTTCCGCATCCCTTTTGCCTTCTCCTCT
TTCCAAATTCTTTCTACAAAAGAAAAATAACACTCGATGCTGGAAAACCCTTTGCCTACTTCCT
GGAAGTCGACCCATCAGGAACTACTTCCAAGAGATGCCTCCATTTCTGTCCTTACGCCAGTCTC
AAAACGCCCACGCCCCACGGCAGCTTACCACAGCAGTTTTCATCCCAGAATTTTCTAAACATTA
TAAAAAGACGTGTTGAAAACAAAACCCCAACACATCGCTGCGTTCCCCAGAGCTGCTTGCCCCA
GGCTGTGCTACCCAGCAAGCCTCCAGAGCAGCGACTCGATGTAGATGACTGAATGTTACTGAGG
TTGCAAGTGACAATCTTAAACTTTGCACTCTTGTATGTACTTCTCATTTCTTTTGGAAACAGTT
TCCAGGAAAGGCTGTTGTTGTGTCTCCTGGTATGATTTGTAGCATTTAAGTTTTTGTTCTTTTT
TATTTTTATTTATTTATTTTTTTAAATTGAGAGCTCTCAGCAGATAGAGCTAGATCTGAACAAC
GAACTCTCTCTCCCCTCCGTCTCCCAGGCTCGGCCATTTTCTCCACTTCTAGTGTTAGACACAA
CCCTGAGTGGTATTTTCTGTGCACTGAAGCAAGCCTATTTTTAAGATATTTAAGGAGAAGTACT
TTAGTTCATACTTGTACTATTTTCCTTTCTGTTGTTTAGCTTCGGTTGAATTACAAATTCTTTG
TGCATTCTTGAATTTGCCTTATTTTATGTAAAATCTATGTCATTCGGGTTTTGACAATGAGTTG
AAGGCATTAGTGATATCCCTTACCTTCTTGTTACATCTAGTTTTCCAAGTACTGACTGTGATTG
TGACCAGGTAATGTGCACTTTTTCTTGTAACTGTGGACATTGCTATGCTTTTTTCTTCTTGTGT
TTCTAGAATTATTGTTCCTTACAGTTACGTAAACAAAAATACAAAAACAACAAAAAAATTTTGT
GATACTGTTGGTGAATATAATGTGAAAATCTTATTGAAATATGAGTATTTTGGAAATACATAGA
TGCACAAACATCTTTTAAAGGTGTGAATTTAGAGTTTGCTTATTTAATGAAAATTTAAAAATTT
GAGGGCTGGTATAAGTTTTCTCTGTTTTTGTTTGGTTTAATAAAAGATTTCTGTGTTAAAGAAA
CAA

hide sequence

RefSeq Acc Id:

XM_017600975 ⟹ XP_017456464

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	14,207,303 - 14,340,852 (-)	NCBI
mRatBN7.2	18	13,932,499 - 14,066,313 (-)	NCBI
Rnor_6.0	18	13,658,260 - 13,792,648 (-)	NCBI

Sequence:

show sequence

GACCAAGAGAGAGGCTTATCCACACAGTATACACACTCATAGTCATACTCAAATACACACAGTA
ACACTTATACACCATAGACAGGGATAAAGTTTATTTAGGAGGCTTCATAGGGAGAAAGCTACCT
ATTAAATTTGGTTGCCATTAAAATTACCTCCACTCAGAACAGTGATGAGATTGATCCAAGTAGT
CAGATTGCTCCTTGGTCCTTACTAGCTGCTGGTTGGAATGGGGAATAAAGAAGAAGAAGGAGAT
GAATAGCTTTCCCCTGGGTATTACTACCTCCTCTACAGGACCTAGGGCAGAGATAGCAGGGCTG
AAAGTCTCCACAACACAAATTCCACTCCATCAACCTCCTCTAAGGATAGGTTATATCTAACAGT
CTCTGCTCATCCATATCAGGGGATTCTACACTATTGTGTCACCACATTCCACACTCTCAGCCAC
TGCTAGGTATGCTGTAGTACCCAGATTGACTCCTTGAGAGAAGACCCATCAACCTGAAAGCAAG
GACCTGAAGCCCCTCCCCTCAATACACACCACCAATAGAAAGAGTCTTCTCTCAGTGTAGCATC
CTGTTTGCTACCTACGAGCAGCCAAGGTTGATGGAGCCAACTGCACTGGATGACTCTGCTGCAG
AGAGCTCTAATGGCAATGAGACTCTGGGGCACAGTTCAGTTGCTTCCGGGGGAGCACATGGCAG
GGAGCCTGGGGACTCCAGCAGTGATGGCAAAACGGGGCTGGAGCAGGAAGAACAGCCACTGAAC
CTGAGTGACAGTCCCCGCTCTGCACAGCTGACTTCGGAATACAGGGTAGAGGACCAAGGCAGTA
ATGGGAAAAACAAGTATAAGAATCTTCTAATCTCCGACCTCAAGATGGAAAGAGAGGCAAGAGA
AAATGGAAGCAAGTCTCCAGCCCACAGCTACTCCAGCTATGACTCTGGCAAAAATGAGGGTGTC
GATCGAGGCGCAGAGGACCTGTCCCTCAGCAGGGGAGACGAAGACGAAGATGAACATGACGAGC
ATGAGGATTCTGAGAAGGTGAACGAGAGCGATGGCGTAGAAGCTGAGAGGCTGAAAGCTTTCAA
CATGTTTGTCAGGCTGTTTGTAGATGAAAACTTGGACCGAATGGTCCCAATCTCTAAGCAGCCC
AAAGAAAAGATCCAGGCTATCATTGACTCATGCAGGCGACAGTTCCCTGAGTATCAAGAGCGCG
CCAGAAAGCGTATCCGTACTTACCTCAAGTCCTGCAGGCGGATGAAGAGAAGTGGTTTTGAGAT
GTCTCGACCTATCCCTTCCCACCTTACTTCAGCAGTTGCAGAGAGTATCTTGGCTTCAGCCTGT
GAAAGCGAGAGTAGAAACGCTGCCAAGAGGATGCGTCTGGATAAAACCCAGGACGAAGCTACTC
CTGCTGACAAACAGTGCAAGCCTGAGGCAGCCCAGGCCACCTACTCAACGTCTACTGTTCCAGG
CTCCCAGGAGGTATTGTACATCAATGGCAATGGGACCTACAGTTACCATAGTTACCGAGGACTA
GGAGGAGGACTGCTAAACCTGAATGACACTTCTAGTAGTGGACCCACAGATCTGAGCATGAAGA
GGCAGCTGGCGCCTGGCTCAGGATCTTCCAGCAGTTCAAACCCCAGACCTCAGCTCAGTCCGAC
AGAAATCAACGCCGTGAGACAGCTTGTCGCCGGGTATCGAGAATCGGCTGCATTTTTATTGCGT
TCTGCAGATGAACTGGAAAATCTCATTTTACAACAGAACTGAGGCCAACGATGTCTGTACTCAC
TGGGTTCTAAATTTGCGGTTTCCACTAATGACACTTGATTTTCCAGCAGAGAGACTCCTAGGCT
TGCTCCACAGTCTTTTAAGAGAAGCGTTTCCATCATGCCATGTTGTCCTTGATCCATACACTGG
TGTGTTGAGGAGCGTCACAGGAACTCTGGTCTTGAAGTACTTGAGATGCTCAAGTGTGCCCAGC
CTGTTGCTTTTGTTTTAGTGTGTCAGCATAAATATCATAAGCAATTTTTTAAAAGGCTGCATAT
TCTCAATTCAAGGATTAAAAATGAAGAAGCTCATGGAATAAAAAAAAAGCTCAAGATCCAACTG
AAATATTAGTGGAATTTTCTACTGACTCATTGGACTGAAAGCTGAAGTATCTGGGGGGAAAAAG
CCAAATTTCTTATTGCTACAGGATATGACAACAATGAAAAGGATCTTGTATTTTAAAAGAAAAA
AATGTAATTTTTATAAAAAGAAAACTTGTTTTTCATTCAAAATGGTCATTTTTACTTTGGTAAC
TTTTTCATAGGTTCTAAAAAGAAAACTGTTTTTGAGAAACTATTGTAAGTACCCTTTCCGCATC
CCTTTTGCCTTCTCCTCTTTCCAAATTCTTTCTACAAAAGAAAAATAACACTCGATGCTGGAAA
ACCCTTTGCCTACTTCCTGGAAGTCGACCCATCAGGAACTACTTCCAAGAGATGCCTCCATTTC
TGTCCTTACGCCAGTCTCAAAACGCCCACGCCCCACGGCAGCTTACCACAGCAGTTTTCATCCC
AGAATTTTCTAAACATTATAAAAAGACGTGTTGAAAACAAAACCCCAACACATCGCTGCGTTCC
CCAGAGCTGCTTGCCCCAGGCTGTGCTACCCAGCAAGCCTCCAGAGCAGCGACTCGATGTAGAT
GACTGAATGTTACTGAGGTTGCAAGTGACAATCTTAAACTTTGCACTCTTGTATGTACTTCTCA
TTTCTTTTGGAAACAGTTTCCAGGAAAGGCTGTTGTTGTGTCTCCTGGTATGATTTGTAGCATT
TAAGTTTTTGTTCTTTTTTATTTTTATTTATTTATTTTTTTAAATTGAGAGCTCTCAGCAGATA
GAGCTAGATCTGAACAACGAACTCTCTCTCCCCTCCGTCTCCCAGGCTCGGCCATTTTCTCCAC
TTCTAGTGTTAGACACAACCCTGAGTGGTATTTTCTGTGCACTGAAGCAAGCCTATTTTTAAGA
TATTTAAGGAGAAGTACTTTAGTTCATACTTGTACTATTTTCCTTTCTGTTGTTTAGCTTCGGT
TGAATTACAAATTCTTTGTGCATTCTTGAATTTGCCTTATTTTATGTAAAATCTATGTCATTCG
GGTTTTGACAATGAGTTGAAGGCATTAGTGATATCCCTTACCTTCTTGTTACATCTAGTTTTCC
AAGTACTGACTGTGATTGTGACCAGGTAATGTGCACTTTTTCTTGTAACTGTGGACATTGCTAT
GCTTTTTTCTTCTTGTGTTTCTAGAATTATTGTTCCTTACAGTTACGTAAACAAAAATACAAAA
ACAACAAAAAAATTTTGTGATACTGTTGGTGAATATAATGTGAAAATCTTATTGAAATATGAGT
ATTTTGGAAATACATAGATGCACAAACATCTTTTAAAGGTGTGAATTTAGAGTTTGCTTATTTA
ATGAAAATTTAAAAATTTGAGGGCTGGTATAAGTTTTCTCTGTTTTTGTTTGGTTTAATAAAAG
ATTTCTGTGTTAAAGAAACAA

hide sequence

RefSeq Acc Id:

XM_039096914 ⟹ XP_038952842

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	14,207,303 - 14,569,697 (-)	NCBI
mRatBN7.2	18	13,932,499 - 14,294,873 (-)	NCBI

RefSeq Acc Id:

XM_039096915 ⟹ XP_038952843

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	14,207,303 - 14,497,962 (-)	NCBI
mRatBN7.2	18	13,932,499 - 14,228,180 (-)	NCBI

RefSeq Acc Id:

XM_039096917 ⟹ XP_038952845

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	14,207,303 - 14,340,811 (-)	NCBI
mRatBN7.2	18	13,932,499 - 14,066,308 (-)	NCBI

RefSeq Acc Id:

XM_039096918 ⟹ XP_038952846

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	14,207,303 - 14,569,697 (-)	NCBI
mRatBN7.2	18	13,932,499 - 14,294,873 (-)	NCBI

RefSeq Acc Id:

XM_063277444 ⟹ XP_063133514

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	14,207,303 - 14,567,731 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100871	(Get FASTA)	NCBI Sequence Viewer
	NP_001402623	(Get FASTA)	NCBI Sequence Viewer
	XP_017456462	(Get FASTA)	NCBI Sequence Viewer
	XP_017456463	(Get FASTA)	NCBI Sequence Viewer
	XP_017456464	(Get FASTA)	NCBI Sequence Viewer
	XP_038952842	(Get FASTA)	NCBI Sequence Viewer
	XP_038952843	(Get FASTA)	NCBI Sequence Viewer
	XP_038952845	(Get FASTA)	NCBI Sequence Viewer
	XP_038952846	(Get FASTA)	NCBI Sequence Viewer
	XP_063133514	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL76114	(Get FASTA)	NCBI Sequence Viewer
	EDL76115	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000038969
	ENSRNOP00000038969.4
	ENSRNOP00000090479
	ENSRNOP00000090479.1
	ENSRNOP00000104273
	ENSRNOP00000104273.1
	ENSRNOP00000107260
	ENSRNOP00000107260.1

RefSeq Acc Id:	NP_001100871 ⟸ NM_001107401
- Peptide Label:	isoform 1
- UniProtKB:	A6J2I2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MESERDMYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGSESSSTDNAKFKFWVKSKGFQL GQPDEVRGGGGGAKQVLFVRVKTTDGVGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRK HAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNM PITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERVQSPQTAQGQQ DDDSAAESSNGNETLGHSSVASGGAHGREPGDSSSDGKTGLEQEEQPLNLSDSPRSAQLTSEYR VEDQGSNGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNEGVDRGAEDLSLSRGDED EDEHDEHEDSEKVNESDGVEAERLKAFNSRPIPSHLTSAVAESILASACESESRNAAKRMRLDK TQDEATPADKQCKPEAAQATYSTSTVPGSQEVLYINGNGTYSYHSYRGLGGGLLNLNDTSSSGP TDLSMKRQLAPGSGSSSSSNPRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN hide sequence

RefSeq Acc Id:

XP_017456462 ⟸ XM_017600973

- Peptide Label:

isoform X1

- Sequence:

show sequence

MRSYLTPFVFFVSLWDSLSFTPSPHTPPPHFYWRLFPSAQLPEDVRKKVSRGEGYGLSKVHDIG
DICKKDSSELRLDDSQDGVGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTY
KAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMK
HMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERVQSPQTAQGQQDDDSAAES
SNGNETLGHSSVASGGAHGREPGDSSSDGKTGLEQEEQPLNLSDSPRSAQLTSEYRVEDQGSNG
KNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNEGVDRGAEDLSLSRGDEDEDEHDEHE
DSEKVNESDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERAR
KRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLDKTQDEATPA
DKQCKPEAAQATYSTSTVPGSQEVLYINGNGTYSYHSYRGLGGGLLNLNDTSSSGPTDLSMKRQ
LAPGSGSSSSSNPRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN

hide sequence

RefSeq Acc Id:

XP_017456463 ⟸ XM_017600974

- Peptide Label:

isoform X5

- Sequence:

show sequence

MSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIE
SDEFDMSDSTRMSAVNSDLSSNLEERVQSPQTAQGQQDDDSAAESSNGNETLGHSSVASGGAHG
REPGDSSSDGKTGLEQEEQPLNLSDSPRSAQLTSEYRVEDQGSNGKNKYKNLLISDLKMEREAR
ENGSKSPAHSYSSYDSGKNEGVDRGAEDLSLSRGDEDEDEHDEHEDSEKVNESDGVEAERLKAF
NMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFE
MSRPIPSHLTSAVAESILASACESESRNAAKRMRLDKTQDEATPADKQCKPEAAQATYSTSTVP
GSQEVLYINGNGTYSYHSYRGLGGGLLNLNDTSSSGPTDLSMKRQLAPGSGSSSSSNPRPQLSP
TEINAVRQLVAGYRESAAFLLRSADELENLILQQN

hide sequence

RefSeq Acc Id:

XP_017456464 ⟸ XM_017600975

- Peptide Label:

isoform X6

- Sequence:

show sequence

MEPTALDDSAAESSNGNETLGHSSVASGGAHGREPGDSSSDGKTGLEQEEQPLNLSDSPRSAQL
TSEYRVEDQGSNGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNEGVDRGAEDLSLS
RGDEDEDEHDEHEDSEKVNESDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDS
CRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKR
MRLDKTQDEATPADKQCKPEAAQATYSTSTVPGSQEVLYINGNGTYSYHSYRGLGGGLLNLNDT
SSSGPTDLSMKRQLAPGSGSSSSSNPRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLIL
QQN

hide sequence

Ensembl Acc Id:

ENSRNOP00000038969 ⟸ ENSRNOT00000041125

RefSeq Acc Id:	XP_038952842 ⟸ XM_039096914
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038952846 ⟸ XM_039096918
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038952843 ⟸ XM_039096915
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038952845 ⟸ XM_039096917
- Peptide Label:	isoform X7

Ensembl Acc Id:

ENSRNOP00000090479 ⟸ ENSRNOT00000103441

RefSeq Acc Id:	NP_001402623 ⟸ NM_001415694
- Peptide Label:	isoform 2
- UniProtKB:	D4A3P4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063133514 ⟸ XM_063277444
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6ADW2 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000107260 ⟸ ENSRNOT00000131803

Ensembl Acc Id:

ENSRNOP00000104273 ⟸ ENSRNOT00000154299

Protein Domains

Nucleolar protein 4 helical

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A3P4-F1-model_v2	AlphaFold	D4A3P4	1-574	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310663	AgrOrtholog
BioCyc Gene	G2FUF-8188	BioCyc
Ensembl Genes	ENSRNOG00000014775	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000041125	ENTREZGENE
	ENSRNOT00000041125.6	UniProtKB/TrEMBL
	ENSRNOT00000103441	ENTREZGENE
	ENSRNOT00000103441.2	UniProtKB/TrEMBL
	ENSRNOT00000131803	ENTREZGENE
	ENSRNOT00000131803.1	UniProtKB/TrEMBL
	ENSRNOT00000154299	ENTREZGENE
	ENSRNOT00000154299.1	UniProtKB/TrEMBL
InterPro	HTH_NOL4	UniProtKB/TrEMBL
	NOL4/NOL4L	UniProtKB/TrEMBL
NCBI Gene	307553	ENTREZGENE
PANTHER	NUCLEOLAR PROTEIN 4	UniProtKB/TrEMBL
	PTHR12449	UniProtKB/TrEMBL
	PTHR12449:SF17	UniProtKB/TrEMBL
Pfam	HTH_NOL4_2nd	UniProtKB/TrEMBL
PhenoGen	Nol4	PhenoGen
RatGTEx	ENSRNOG00000014775	RatGTEx
UniProt	A0A8I6ADW2	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LHY5_RAT	UniProtKB/TrEMBL
	A0ABK0LQ87_RAT	UniProtKB/TrEMBL
	A6J2I2	ENTREZGENE, UniProtKB/TrEMBL
	D4A3P4	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Nol4	nucleolar protein 4	Nol4_predicted	nucleolar protein 4 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Nol4_predicted	nucleolar protein 4 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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