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Gene: Neurod4 (neuronal differentiation 4) Rattus norvegicus

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Symbol:

Neurod4

Name:

neuronal differentiation 4

RGD ID:

1310434

Description:

Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and E-box binding activity. Involved in positive regulation of cell differentiation and retina development in camera-type eye. Predicted to be active in nucleus. Orthologous to human NEUROD4 (neuronal differentiation 4); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; bisphenol A.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC288821; neurogenic differentiation 4; neurogenic differentiation factor 4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NEUROD4 (neuronal differentiation 4)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Neurod4 (neurogenic differentiation 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Neurod4 (neuronal differentiation 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NEUROD4 (neuronal differentiation 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NEUROD4 (neuronal differentiation 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Neurod4 (neuronal differentiation 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NEUROD4 (neuronal differentiation 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NEUROD4 (neuronal differentiation 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Neurod4 (neuronal differentiation 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	NEUROD4 (neuronal differentiation 4)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Neurod4 (neurogenic differentiation 4)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	neurod4 (neuronal differentiation 4)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	cnd-1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	neurod4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	7,740,852 - 7,828,052 (-)	NCBI		GRCr8
mRatBN7.2	7	7,090,048 - 7,102,018 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	7,090,045 - 7,102,030 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	10,013,848 - 10,025,820 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	11,889,512 - 11,901,484 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	9,697,683 - 9,709,648 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	9,699,964 - 9,712,067 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	9,699,961 - 9,711,928 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	9,865,743 - 9,877,660 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	8,534,957 - 8,547,130 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	8,536,559 - 8,547,119 (-)	NCBI
Celera	7	5,307,012 - 5,318,756 (-)	NCBI		Celera
Cytogenetic Map	7	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Neurod4	Rat	1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene	multiple interactions	ISO	RGD:1321333	6480464	[2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ...	CTD	PMID:25510870
Neurod4	Rat	2,2',4,4',5,5'-hexachlorobiphenyl	multiple interactions	ISO	RGD:1321333	6480464	[2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ...	CTD	PMID:25510870
Neurod4	Rat	2,2',5,5'-tetrachlorobiphenyl	multiple interactions	ISO	RGD:1321333	6480464	[2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ...	CTD	PMID:25510870
Neurod4	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	RGD:1321333	6480464	Tetrachlorodibenzodioxin affects the expression of NEUROD4 mRNA	CTD	PMID:21570461
Neurod4	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	EXP		6480464	Tetrachlorodibenzodioxin results in increased expression of NEUROD4 mRNA	CTD	PMID:32109520\|PMID:33387578
Neurod4	Rat	2,3,7,8-Tetrachlorodibenzofuran	increases expression	EXP		6480464	2,3,7,8-tetrachlorodibenzofuran results in increased expression of NEUROD4 mRNA	CTD	PMID:32109520
Neurod4	Rat	2,4,4'-trichlorobiphenyl	multiple interactions	ISO	RGD:1321333	6480464	[2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ...	CTD	PMID:25510870
Neurod4	Rat	4,4'-sulfonyldiphenol	multiple interactions	ISO	RGD:1321332	6480464	[bisphenol S co-treated with Fulvestrant] results in decreased methylation of NEUROD4 gene	CTD	PMID:31601247
Neurod4	Rat	aflatoxin B1	decreases methylation	ISO	RGD:1321332	6480464	Aflatoxin B1 results in decreased methylation of NEUROD4 gene	CTD	PMID:27153756
Neurod4	Rat	benzo[a]pyrene	increases methylation	ISO	RGD:1321332	6480464	Benzo(a)pyrene results in increased methylation of NEUROD4 exon; Benzo(a)pyrene results in increased methylation of NEUROD4 more ...	CTD	PMID:27901495
Neurod4	Rat	benzo[a]pyrene	decreases methylation	ISO	RGD:1321332	6480464	Benzo(a)pyrene results in decreased methylation of NEUROD4 5' UTR	CTD	PMID:27901495
Neurod4	Rat	bis(2-chloroethyl) sulfide	increases expression	ISO	RGD:1321333	6480464	Mustard Gas results in increased expression of NEUROD4 mRNA	CTD	PMID:15674843
Neurod4	Rat	bisphenol A	increases expression	ISO	RGD:1321333	6480464	bisphenol A results in increased expression of NEUROD4 mRNA	CTD	PMID:16902998
Neurod4	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of NEUROD4 mRNA	CTD	PMID:25181051
Neurod4	Rat	cadmium dichloride	decreases methylation	EXP		6480464	Cadmium Chloride results in decreased methylation of NEUROD4 promoter	CTD	PMID:22457795
Neurod4	Rat	chlorpyrifos	decreases expression	ISO	RGD:1321333	6480464	Chlorpyrifos results in decreased expression of NEUROD4 mRNA	CTD	PMID:37019170
Neurod4	Rat	clothianidin	decreases expression	ISO	RGD:1321332	6480464	clothianidin results in decreased expression of NEUROD4 mRNA	CTD	PMID:31626844
Neurod4	Rat	copper atom	increases expression	EXP		6480464	Copper deficiency results in increased expression of NEUROD4 mRNA	CTD	PMID:26033743
Neurod4	Rat	copper(0)	increases expression	EXP		6480464	Copper deficiency results in increased expression of NEUROD4 mRNA	CTD	PMID:26033743
Neurod4	Rat	fulvestrant	multiple interactions	ISO	RGD:1321332	6480464	[bisphenol S co-treated with Fulvestrant] results in decreased methylation of NEUROD4 gene	CTD	PMID:31601247
Neurod4	Rat	gentamycin	increases expression	EXP		6480464	Gentamicins results in increased expression of NEUROD4 mRNA	CTD	PMID:33387578
Neurod4	Rat	hydroxyurea	decreases expression	ISO	RGD:1321333	6480464	Hydroxyurea results in decreased expression of NEUROD4 mRNA	CTD	PMID:12929121
Neurod4	Rat	lead diacetate	decreases expression	EXP		6480464	lead acetate results in decreased expression of NEUROD4 mRNA	CTD	PMID:22641619
Neurod4	Rat	lead(0)	affects expression	ISO	RGD:1321332	6480464	Lead affects the expression of NEUROD4 mRNA	CTD	PMID:28903495
Neurod4	Rat	metacetamol	decreases expression	ISO	RGD:1321333	6480464	3-hydroxyacetanilide results in decreased expression of NEUROD4 mRNA	CTD	PMID:18544908
Neurod4	Rat	N-methyl-4-phenylpyridinium	increases expression	ISO	RGD:1321332	6480464	1-Methyl-4-phenylpyridinium results in increased expression of NEUROD4 mRNA	CTD	PMID:24810058
Neurod4	Rat	okadaic acid	increases expression	ISO	RGD:1321332	6480464	Okadaic Acid results in increased expression of NEUROD4 mRNA	CTD	PMID:38832940
Neurod4	Rat	p-anisidine	decreases expression	ISO	RGD:1321333	6480464	4-anisidine results in decreased expression of NEUROD4 mRNA	CTD	PMID:12929121
Neurod4	Rat	paclitaxel	decreases expression	ISO	RGD:1321333	6480464	Paclitaxel results in decreased expression of NEUROD4 mRNA	CTD	PMID:12929121
Neurod4	Rat	paracetamol	decreases expression	ISO	RGD:1321333	6480464	Acetaminophen results in decreased expression of NEUROD4 mRNA	CTD	PMID:18544908
Neurod4	Rat	paracetamol	increases expression	EXP		6480464	Acetaminophen results in increased expression of NEUROD4 mRNA	CTD	PMID:33387578
Neurod4	Rat	PCB138	multiple interactions	ISO	RGD:1321333	6480464	[2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ...	CTD	PMID:25510870
Neurod4	Rat	thalidomide	increases expression	ISO	RGD:1321333	6480464	Thalidomide results in increased expression of NEUROD4 mRNA	CTD	PMID:26217789
Neurod4	Rat	trichloroethene	increases expression	EXP		6480464	Trichloroethylene results in increased expression of NEUROD4 mRNA	CTD	PMID:33387578

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Neurod4	Rat	amacrine cell differentiation	involved_in	ISO	RGD:1321333	1624291	PMID:11861467	RGD	PMID:11861467
Neurod4	Rat	amacrine cell differentiation	involved_in	IEA	UniProtKB:O09105\|ensembl:ENSMUSP00000051379	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Neurod4	Rat	axon development	involved_in	IBA	FB:FBgn0015550\|FB:FBgn0032651\|MGI:104654\|MGI:109619\|MGI:1930001\|PANTHER:PTN000446010\|WB:WBGene00000561\|WB:WBGene00003595\|ZFIN:ZDB-GENE-990415-174	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Neurod4	Rat	camera-type eye development	involved_in	IBA	MGI:108055\|PANTHER:PTN004509808\|RGD:1310434\|ZFIN:ZDB-GENE-030730-1	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Neurod4	Rat	camera-type eye development	acts_upstream_of_or_within	IEA	UniProtKB:O09105\|ensembl:ENSMUSP00000051379	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Neurod4	Rat	camera-type eye development	acts_upstream_of_or_within	ISO	RGD:1321333	1624291	MGI:1339708 PMID:11861467	RGD	PMID:11861467
Neurod4	Rat	cell differentiation	involved_in	IEA	UniProtKB-KW:KW-0221	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Neurod4	Rat	cell fate commitment	acts_upstream_of_or_within	ISO	RGD:1321333	1624291	MGI:1339708 PMID:11032813	RGD	PMID:11032813
Neurod4	Rat	cell fate commitment	acts_upstream_of_or_within	IEA	UniProtKB:O09105\|ensembl:ENSMUSP00000051379	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Neurod4	Rat	central nervous system development	involved_in	IEA	ARBA:ARBA00026561	1600115	GO_REF:0000117	UniProt	GO_REF:0000117
Neurod4	Rat	motor neuron migration	acts_upstream_of_or_within	ISO	RGD:1321333	1624291	MGI:2158737\|MGI:96919 PMID:15976074	RGD	PMID:15976074
Neurod4	Rat	motor neuron migration	acts_upstream_of_or_within	IEA	UniProtKB:O09105\|ensembl:ENSMUSP00000051379	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Neurod4	Rat	nervous system development	involved_in	IEA	UniProtKB-KW:KW-0524	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Neurod4	Rat	nervous system development	involved_in	IEA	InterPro:IPR016637	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Neurod4	Rat	neuroblast proliferation	acts_upstream_of_or_within	ISO	RGD:1321333	1624291	MGI:96919 PMID:15976074	RGD	PMID:15976074
Neurod4	Rat	neuroblast proliferation	acts_upstream_of_or_within	IEA	UniProtKB:O09105\|ensembl:ENSMUSP00000051379	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Neurod4	Rat	neuron development	acts_upstream_of_or_within	IEA	UniProtKB:O09105\|ensembl:ENSMUSP00000051379	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Neurod4	Rat	neuron development	acts_upstream_of_or_within	ISO	RGD:1321333	1624291	MGI:2158737 PMID:15976074	RGD	PMID:15976074
Neurod4	Rat	Notch signaling pathway	acts_upstream_of_or_within	IEA	UniProtKB:O09105\|ensembl:ENSMUSP00000051379	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Neurod4	Rat	Notch signaling pathway	acts_upstream_of_or_within	ISO	RGD:1321333	1624291	MGI:96919 PMID:15976074	RGD	PMID:15976074
Neurod4	Rat	oligodendrocyte differentiation	acts_upstream_of_or_within	IEA	UniProtKB:O09105\|ensembl:ENSMUSP00000051379	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Neurod4	Rat	oligodendrocyte differentiation	acts_upstream_of_or_within	ISO	RGD:1321333	1624291	MGI:96919 PMID:15976074	RGD	PMID:15976074
Neurod4	Rat	positive regulation of cell differentiation		IMP		2311603		RGD
Neurod4	Rat	positive regulation of cell differentiation	involved_in	ISO	RGD:1321333	1624291	PMID:11861467	RGD	PMID:11861467
Neurod4	Rat	positive regulation of cell differentiation	involved_in	IEA	UniProtKB:O09105\|ensembl:ENSMUSP00000051379	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Neurod4	Rat	positive regulation of transcription by RNA polymerase II	involved_in	IBA	FB:FBgn0010433\|FB:FBgn0023091\|MGI:103239\|MGI:104654\|MGI:106593\|MGI:107754\|MGI:107755\|MGI:109619\|MGI:1339708\|MGI:2153710\|MGI:891976\|MGI:893591\|PANTHER:PTN000446010\|RGD:3165\|UniProtKB:Q13562\|UniProtKB:Q8N100\|UniProtKB:Q9Y4Z2\|WB:WBGene00001961\|WB:WBGene00003595	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Neurod4	Rat	regulation of DNA-templated transcription	involved_in	IEA	InterPro:IPR016637	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Neurod4	Rat	retina development in camera-type eye		IEP		2311603		RGD

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Neurod4	Rat	nucleus	located_in	IEA	UniProtKB-KW:KW-0539	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Neurod4	Rat	nucleus	is_active_in	IBA	FB:FBgn0010433\|FB:FBgn0015550\|FB:FBgn0023091\|MGI:104654\|MGI:107755\|MGI:109619\|MGI:1339708\|MGI:1355331\|MGI:1355553\|MGI:1918343\|MGI:1930001\|MGI:891976\|MGI:893591\|PANTHER:PTN000446010\|RGD:3091\|RGD:3165\|UniProtKB:Q13562\|UniProtKB:Q8N100\|UniProtKB:Q90XB3\|UniProtKB:Q96SQ7\|UniProtKB:Q9Y4Z2\|WB:WBGene00000561\|WB:WBGene00003018	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Neurod4	Rat	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	1600115	GO_REF:0000044	UniProt	GO_REF:0000044

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Neurod4	Rat	DNA binding	enables	IEA	UniProtKB-KW:KW-0238	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Neurod4	Rat	DNA-binding transcription factor activity, RNA polymerase II-specific	enables	IBA	MGI:103239\|MGI:104654\|MGI:106593\|MGI:107755\|MGI:1339708\|MGI:1355331\|MGI:1930001\|MGI:891976\|MGI:893591\|PANTHER:PTN001060907\|RGD:631350\|UniProtKB:Q13562\|UniProtKB:Q9Y4Z2	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Neurod4	Rat	E-box binding	enables	IBA	MGI:107754\|MGI:107755\|MGI:109619\|MGI:1339708\|PANTHER:PTN000446010\|UniProtKB:Q13562\|UniProtKB:Q92886\|UniProtKB:Q96SQ7	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Neurod4	Rat	protein binding	enables	ISO	RGD:1321332	1624291	UniProtKB:O15481\|UniProtKB:P15884-3\|UniProtKB:Q13526 PMID:32296183	RGD	PMID:32296183
Neurod4	Rat	protein dimerization activity	enables	IEA	InterPro:IPR011598\|InterPro:IPR036638	1600115	GO_REF:0000002	InterPro	GO_REF:0000002

#	Reference Title	Reference Citation
1.	Involvement of Ath3 in CNTF-mediated differentiation of the late retinal progenitors.	Bhattacharya S, etal., Mol Cell Neurosci. 2004 Sep;27(1):32-43.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	Comprehensive gene review and curation	RGD comprehensive gene curation

PMID:11032813	PMID:11861467	PMID:15976074	PMID:29687839	PMID:32468054

Neurod4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	7,740,852 - 7,828,052 (-)	NCBI		GRCr8
mRatBN7.2	7	7,090,048 - 7,102,018 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	7,090,045 - 7,102,030 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	10,013,848 - 10,025,820 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	11,889,512 - 11,901,484 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	9,697,683 - 9,709,648 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	9,699,964 - 9,712,067 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	9,699,961 - 9,711,928 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	9,865,743 - 9,877,660 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	8,534,957 - 8,547,130 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	8,536,559 - 8,547,119 (-)	NCBI
Celera	7	5,307,012 - 5,318,756 (-)	NCBI		Celera
Cytogenetic Map	7	q11	NCBI

NEUROD4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	55,019,974 - 55,030,017 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	55,019,974 - 55,030,017 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	55,413,758 - 55,423,801 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	53,699,996 - 53,710,068 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	53,699,888 - 53,707,486	NCBI
Celera	12	55,065,583 - 55,075,655 (+)	NCBI		Celera
Cytogenetic Map	12	q13.2	NCBI
HuRef	12	52,452,529 - 52,462,601 (+)	NCBI		HuRef
CHM1_1	12	55,380,629 - 55,390,701 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	54,986,632 - 54,996,675 (+)	NCBI		T2T-CHM13v2.0

Neurod4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	130,104,021 - 130,116,123 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	130,104,021 - 130,116,109 (-)	Ensembl		GRCm39 Ensembl
GRCm38	10	130,268,152 - 130,280,254 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	130,268,152 - 130,280,240 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	129,705,208 - 129,717,296 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	129,671,102 - 129,683,175 (-)	NCBI		MGSCv36	mm8
Celera	10	132,642,855 - 132,654,951 (-)	NCBI		Celera
Cytogenetic Map	10	D3	NCBI
cM Map	10	77.81	NCBI

Neurod4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955458	2,138,849 - 2,146,636 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955458	2,138,849 - 2,146,636 (+)	NCBI	ChiLan1.0	ChiLan1.0

NEUROD4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	39,146,944 - 39,156,972 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	39,143,713 - 39,153,741 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	33,719,986 - 33,730,012 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	34,447,026 - 34,457,083 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

NEUROD4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	384,809 - 396,731 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	389,095 - 390,090 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	45,848,698 - 45,858,754 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	391,934 - 402,001 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	394,351 - 395,346 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	386,476 - 396,504 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	394,850 - 404,905 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	46,253,998 - 46,264,178 (+)	NCBI		UU_Cfam_GSD_1.0

Neurod4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	60,809,685 - 60,820,300 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936891	474,111 - 482,095 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936891	471,576 - 482,195 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NEUROD4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	20,046,937 - 20,059,128 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	20,046,864 - 20,057,380 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	20,909,099 - 20,919,582 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NEUROD4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	51,112,973 - 51,120,862 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666037	194,911,270 - 194,921,368 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Neurod4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624983	85,494 - 86,486 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624983	79,564 - 89,114 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Neurod4
66 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	900
Count of miRNA genes:	305
Interacting mature miRNAs:	395
Transcripts:	ENSRNOT00000011167
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61410	Bw19	Body weight QTL 19	6.2	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	7	1	44782185	Rat
1300176	Hrtrt10	Heart rate QTL 10	3.19		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	7	664270	26029351	Rat
2317047	Wbc4	White blood cell count QTL 4		0.01	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	7	1	35342956	Rat
9590102	Sffal5	Serum free fatty acids level QTL 5	8.62	0.001	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	7	5329019	50329019	Rat
2298550	Neuinf6	Neuroinflammation QTL 6	3.3		nervous system integrity trait (VT:0010566)	spinal cord RT1-B protein level (CMO:0002132)	7	1	27829089	Rat
631503	Bp102	Blood pressure QTL 102	1.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	1	44822433	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	924703	115097879	Rat
10755438	Coatc9	Coat color QTL 9		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	3529280	48529280	Rat
724560	Plsm3	Polydactyly-luxate syndrome (PLS) morphotypes QTL 3		0.0003	tibia length (VT:0004357)	tibia length (CMO:0000450)	7	1	34000259	Rat
9590142	Scort5	Serum corticosterone level QTL 5	24.4	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	7	1	31962314	Rat
7411566	Bw136	Body weight QTL 136	10.4	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	7	1	31962314	Rat

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	10	47	113	59	58	27	25	27	6	182	93	93	45	55	31


RefSeq Transcripts	NM_001105942	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240818	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240819	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240820	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240822	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240823	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594690	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263094	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263095	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000011167 ⟹ ENSRNOP00000011167

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	7,090,045 - 7,102,030 (-)	Ensembl
Rnor_6.0 Ensembl	7	9,699,961 - 9,711,928 (-)	Ensembl

RefSeq Acc Id:

NM_001105942 ⟹ NP_001099412

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	7,740,852 - 7,752,824 (-)	NCBI
mRatBN7.2	7	7,090,048 - 7,102,018 (-)	NCBI
Rnor_6.0	7	9,699,964 - 9,711,916 (-)	NCBI
Rnor_5.0	7	9,865,743 - 9,877,660 (-)	NCBI
RGSC_v3.4	7	8,534,957 - 8,547,130 (-)	RGD
Celera	7	5,307,012 - 5,318,756 (-)	RGD

Sequence:

show sequence

TCAGATCACAGGAGCTGCCCAGAGACTGTGGTACTGAAAGAGCTACTCGCGGGAGCTGACTCCGGGAAAGAGAATCTATAGATGGCAAAAATGTACATGAAATCCAAGGATATGGTGGAGCTGGTCAA
CACACAATCTTGGATGGACAAAGGTCTGAGCTCTCAAAATGAGATGGAGGAGCAAGAGAGAAGACCAGGGTCTTATGGAATGCTTGGAAACTTAATGGAAGAGCATGACAGTATTGAAGAGGAGGAAG
AAGAGGAAGAAGATGGAGATAAGCCTAAAAGAAGAGGCCCCAAGAAAAAGAAGATGACTAAAGCTCGCCTGGAAAGGTTCAGGGCTCGAAGAGTCAAGGCCAATGCTAGAGAACGAACCCGGATGCAT
GGCCTGAATGATGCCTTGGATAATCTTAGAAGAGTCATGCCATGTTACTCTAAAACTCAAAAGCTTTCCAAGATAGAGACTCTTCGACTGGCAAGGAACTACATCTGGGCCTTGTCTGAAGTCTTGGA
AACTGGTCAGACACTTGAAGGGAAGGGATTTGTGGAAATGCTATGTAAAGGTCTCTCTCAGCCCACAAGCAACCTGGTTGCTGGATGCCTCCAACTGGGGCCTCAATCTGCCCTCTTGGAGAAGCGTG
AGGAAAAATCTCCAATTTGTGACTCTACTGTCTCTGTCCACAGCTTCAACTATCAGTCTCCAGGGCTCCCCAGCCCTCCTTATGGCCATATGGAAACACATCCTCTCCATCTCAAGCCTCAACCATTT
AAGAGTTTGGGAGACTCTTTTGGGAGCCATCCACCTGACTGCAGTACCCCCCCTTATGAGGGTCCACTCACACCACCCCTGAGTATTAGTGGCAACTTCTCCTTAAAGCAAGAGGGCTCCCCCGACTT
GGAAAAATCCTACAACTTCATGCCACATTATACCTCTGCAAGTGTAAGTTCAGGGCATGTGCATTCAACGCCCTTCCAGACTGGCACTCCACGCTATGATGTTCCTGTAGACCTGACCTATGATTCCT
ACCCCCACCACGGTATTGGAACTCAGATCAATACAATCTTCTCCGATTAGAGCAATAAGATAACCACCAAAATTTCAGAGAATGAAATGGAGATGTTTTCCATGTTTCTGGTGGCTGAGCTAAACTCT
CAGAGAATTTCAAAGAACCTTGATAGACATCAACATAGTGGTCCCAGTTTGTTCAGAACTCTCTGTATCTGCTAACTTTCTTCTCGTTAACTCCTCACATTGGACCTGTCTTATATTTGGGATCCTCA
AGTGAACATATTTGATGGTTTGGGGCCACATAGTAATAGAACAGAGAGCCTAGGCTCTGCTCCAGTGGTGCCAAAGACTGACTGGATGCTCTGCCCATTAACTTTCCATTTCCAGTGTTTGTTGCTTT
CTAATAAATATGAAGCAACTGTTCTAAATCAACATATACCTTTCATCTCTTGTACATTTTTAAAACTGAAAAGCAATAAAAGGAAACAGCCTAAATGAAATGATTATACAGAACTGAAAGGGCCATCA
GGTATATGTCTGTTGGCTTATAGAACACAAAATTTGTGTGTTTGACAACTCATCTTTGTGTCTATTTAACTATAACTTCTAGAGCCTAAAATAATAACATGGATGTTACCATAAATAGCCAAGAATGT
TCTTGAAGAGATTAGCTCTACTTCTTACTGTGCCGAAAGGTATCCACAAACTTTTTAGTGATTGCAGAGCCAGGAAATAAGCCTCATACAAACTTTGTTCTTGATACTATTTAAAAAACAACTGTCTT
AGTACTAGGAGTCAAGCAAGAGAGAATTGAGATTTCTGTTCTGTGACACAGAAATATCACCCAGCTCATTTCTTAGCTTCTAAGAACTGAAGGGCTGTGGGAATTCGGGTGTTCAGGTGCTTCAGTTA
GAATCAGAACTCAGCCAGGTTCAGTCTGTAGAGCAATAAAATGGTGGTTGGCTGACACCCAACTAACACATGAAGGACTCTGCCTCACATCTAACCACTGGGGAAAATGTGGATTTTCTCTAGCAAGA
TGAATTTCACTGTTTAAAGTGATATGATTACAGCCACAGAGTTTTGTCCACTCCAGTACCATGTATTCTAGGACAATAGGCACTAATCAGTCTTGAATCCTCACAACATAAATGTGACTCCTGACTCC
ACTGATCGTTTCTTTGTCTTCATTTTCAAGATATCATGCTATCATGCTATTATCAAGCAAAATTTTGATTAGAATCAAAATTAAGGGTCAATGAAGGCTTTTGTTTGTATCTTCAGCATAGGTTTTAA
TCAGTTTTAAGAAAGTTTATTTTTTTTATGTGGCATCTTTTTTATTTTGTATCCACACTGGCTTTGCCAAGTTTCTCTTCTCCTGAGAAATTAGCTCTGAGAAATTTTACTATCATGATCCATCTTCC
ACAGCCATTATTTAGGTTCAACTCAAGAATATAAATAGCTTATTAATTTATAGTGGGTGAGGATACATCTCTAAGGATAAAATTTACAATATCAATGACAGAAGAACATGTTATCTATCTACCAAACT
ATATATATGTATCTTTTTTCTTTATTGCTCTTATTTATTTCTTCACACTGTGAGTTACTTTATGTCCATCTTATTGCAGTACTTACTCTCCTCTACCTTGGACCTTTGGCTTATAAATATGTTTAAAA
GTTTGCAAAGAAGTCTTAAACAACTGATTCAACACCTTGAATCGCCCTCGTGGGAATAGGAAAGGAGAATTATTTATAGAGTCATCCCATATAATTTTTTGAGAATTTGCTGTTCTTACCTAGTATTT
ATGTTTATAGATAATTGCTTTCTGCATTATTTATTAGATACTATTTATTTAATTTATTTTCCCCCTTTTATGTTTAAATTTTAGTCCCATAGATATATCCTTAAAGCCTCAGTGGGAAAGTAGCTTAT
AAGTTTGGACTGAGAGAAAAGGAGAAATTGGTTCTTGATTGCTTGTGATGCTTTTATTAAAAAAGAGCAATAATTTGAATAGCTATGCAAATTAACGGCTTTAGATTTTTTCTTTTGAGGCACAACAG
AGTTACATTTTTATTTATGCCTTTAGAGAATGGAGTACATGTGAACCAAGACTATATAAACCTGTGAAGAAAGATTTTATAATTGAATACAAATTTAGTACTGTACCATGCTTGGAAAGAACTCGTTC
TTTAAATAATGTCTAGTCTTCTGAGAATGTTTTTAGATAAAAATGAAGCAATTGTTTAAAAGAAATGACTGTTTTCTCTCCCTTTTCCAGTAATAAAGCTTTGAGTGTTCTTAC

hide sequence

RefSeq Acc Id:

XM_063263094 ⟹ XP_063119164

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	7,740,853 - 7,828,052 (-)	NCBI

RefSeq Acc Id:

XM_063263095 ⟹ XP_063119165

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	7,740,853 - 7,754,701 (-)	NCBI


Protein RefSeqs	NP_001099412	(Get FASTA)	NCBI Sequence Viewer
	XP_063119164	(Get FASTA)	NCBI Sequence Viewer
	XP_063119165	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL89112	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000011167
	ENSRNOP00000011167.3

RefSeq Acc Id:

NP_001099412 ⟸ NM_001105942

- UniProtKB:

D4A7M5 (UniProtKB/TrEMBL), A6K842 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAKMYMKSKDMVELVNTQSWMDKGLSSQNEMEEQERRPGSYGMLGNLMEEHDSIEEEEEEEEDGDKPKRRGPKKKKMTKARLERFRARRVKANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIET
LRLARNYIWALSEVLETGQTLEGKGFVEMLCKGLSQPTSNLVAGCLQLGPQSALLEKREEKSPICDSTVSVHSFNYQSPGLPSPPYGHMETHPLHLKPQPFKSLGDSFGSHPPDCSTPPYEGPLTPPL
SISGNFSLKQEGSPDLEKSYNFMPHYTSASVSSGHVHSTPFQTGTPRYDVPVDLTYDSYPHHGIGTQINTIFSD

hide sequence

Ensembl Acc Id:

ENSRNOP00000011167 ⟸ ENSRNOT00000011167

RefSeq Acc Id:	XP_063119164 ⟸ XM_063263094
- Peptide Label:	isoform X1
- UniProtKB:	D4A7M5 (UniProtKB/TrEMBL), A6K842 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063119165 ⟸ XM_063263095
- Peptide Label:	isoform X1
- UniProtKB:	D4A7M5 (UniProtKB/TrEMBL), A6K842 (UniProtKB/TrEMBL)

Protein Domains

bHLH

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A7M5-F1-model_v2	AlphaFold	D4A7M5	1-330	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-35078	BioCyc
Ensembl Genes	ENSRNOG00000008449	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000011167	ENTREZGENE
	ENSRNOT00000011167.7	UniProtKB/TrEMBL
Gene3D-CATH	4.10.280.10	UniProtKB/TrEMBL
InterPro	bHLH_transcription_factors	UniProtKB/TrEMBL
	HLH_DNA-bd	UniProtKB/TrEMBL
	HLH_DNA-bd_sf	UniProtKB/TrEMBL
	Neurogenic_DUF	UniProtKB/TrEMBL
	TF_bHLH_NeuroD	UniProtKB/TrEMBL
KEGG Report	rno:288821	UniProtKB/TrEMBL
NCBI Gene	288821	ENTREZGENE
PANTHER	BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED	UniProtKB/TrEMBL
	PTHR19290:SF86	UniProtKB/TrEMBL
Pfam	HLH	UniProtKB/TrEMBL
	Neuro_bHLH	UniProtKB/TrEMBL
PhenoGen	Neurod4	PhenoGen
PIRSF	bHLH_NeuroD	UniProtKB/TrEMBL
PROSITE	HLH	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000008449	RatGTEx
SMART	HLH	UniProtKB/TrEMBL
Superfamily-SCOP	HLH_basic	UniProtKB/TrEMBL
UniProt	A6K842	ENTREZGENE, UniProtKB/TrEMBL
	D4A7M5	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-10-05	Neurod4	neuronal differentiation 4	Neurod4	neurogenic differentiation 4	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Neurod4	neurogenic differentiation 4	Neurod4_predicted	neurogenic differentiation 4 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Neurod4_predicted	neurogenic differentiation 4 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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