Advanced Search (OLGA)

Gene: Pkhd1l1 (PKHD1 like 1) Rattus norvegicus

Analyze

Symbol:

Pkhd1l1

Name:

PKHD1 like 1

RGD ID:

1310406

Description:

Predicted to act upstream of or within sensory perception of sound. Predicted to be located in stereocilium coat and stereocilium tip. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness. Orthologous to human PKHD1L1 (PKHD1 like 1); INTERACTS WITH 17beta-estradiol; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

fibrocystin L; fibrocystin-L; LOC314917; MGC124881; polycystic kidney and hepatic disease 1-like 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PKHD1L1 (PKHD1 like 1)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Pkhd1l1 (polycystic kidney and hepatic disease 1-like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Pkhd1l1 (PKHD1 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PKHD1L1 (PKHD1 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PKHD1L1 (PKHD1 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Pkhd1l1 (PKHD1 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PKHD1L1 (PKHD1 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PKHD1L1 (PKHD1 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Pkhd1l1 (PKHD1 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Pkhd1l1 (PKHD1 like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	PIH1D1 (PIH1 domain containing 1)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	PKHD1L1 (PKHD1 like 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Pkhd1l1 (polycystic kidney and hepatic disease 1-like 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pkhd1l1 (polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pkhd1l1.2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pkhd1l1.2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	pkhd1l1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	LOC100486915	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	77,505,063 - 77,679,994 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	77,505,152 - 77,679,994 (+)	Ensembl				GRCr8
mRatBN7.2	7	75,620,384 - 75,795,335 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	75,620,484 - 75,795,335 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	77,465,056 - 77,641,003 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	79,667,547 - 79,843,497 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	79,545,040 - 79,714,899 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	83,373,022 - 83,548,944 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	83,373,022 - 83,545,540 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	83,387,129 - 83,563,775 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	80,324,195 - 80,499,655 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	72,604,222 - 72,765,134 (+)	NCBI		Celera
RGSC_v3.1	7	80,322,001 - 80,520,504 (+)	NCBI
Cytogenetic Map	7	q31	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Autosomal Recessive Nonsyndromic Deafness 124 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (EXP,ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-palmitoylglycerol (ISO)

4,4'-diaminodiphenylmethane (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

amitrole (EXP)

atrazine (EXP)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

Butylbenzyl phthalate (ISO)

cadmium dichloride (EXP)

CGP 52608 (ISO)

chlorpyrifos (ISO)

DDT (EXP)

decabromodiphenyl ether (EXP)

disodium selenite (ISO)

diuron (EXP)

endosulfan (EXP)

fenvalerate (EXP)

methimazole (EXP)

methotrexate (ISO)

okadaic acid (ISO)

ozone (ISO)

paracetamol (EXP)

potassium dichromate (ISO)

pregnenolone 16alpha-carbonitrile (EXP)

progesterone (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

tetrachloromethane (ISO)

titanium dioxide (EXP,ISO)

trichloroethene (EXP)

triclosan (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

XL147 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

sensory perception of sound (ISO)

Cellular Component

membrane (IEA)

stereocilium coat (IEA,ISO)

stereocilium membrane (IEA)

stereocilium tip (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:12477932	PMID:15632090	PMID:24586199

Genomics

Comparative Map Data

Pkhd1l1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	77,505,063 - 77,679,994 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	77,505,152 - 77,679,994 (+)	Ensembl				GRCr8
mRatBN7.2	7	75,620,384 - 75,795,335 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	75,620,484 - 75,795,335 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	77,465,056 - 77,641,003 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	79,667,547 - 79,843,497 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	79,545,040 - 79,714,899 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	83,373,022 - 83,548,944 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	83,373,022 - 83,545,540 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	83,387,129 - 83,563,775 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	80,324,195 - 80,499,655 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	72,604,222 - 72,765,134 (+)	NCBI		Celera
RGSC_v3.1	7	80,322,001 - 80,520,504 (+)	NCBI
Cytogenetic Map	7	q31	NCBI

PKHD1L1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	109,362,461 - 109,537,207 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	109,362,461 - 109,537,207 (+)	Ensembl			hg38	GRCh38
GRCh37	8	110,374,690 - 110,549,436 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	110,443,882 - 110,612,676 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	8	110,443,881 - 110,611,740	NCBI
Celera	8	106,562,401 - 106,730,887 (+)	NCBI		Celera
Cytogenetic Map	8	q23.1-q23.2	NCBI
HuRef	8	105,696,732 - 105,865,477 (+)	NCBI		HuRef
CHM1_1	8	110,414,966 - 110,583,773 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	110,491,005 - 110,665,782 (+)	NCBI		T2T-CHM13v2.0

Pkhd1l1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	44,320,792 - 44,464,772 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	44,320,890 - 44,464,765 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	15	44,457,396 - 44,601,376 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	44,457,494 - 44,601,369 (+)	Ensembl			mm10	GRCm38
MGSCv37	15	44,289,099 - 44,432,716 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	15	44,287,627 - 44,431,244 (+)	NCBI		MGSCv36	mm8
Celera	15	44,922,570 - 45,056,697 (+)	NCBI		Celera
Cytogenetic Map	15	B3.2	NCBI
cM Map	15	16.91	NCBI

Pkhd1l1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955417	16,776,731 - 16,922,789 (+)	Ensembl
ChiLan1.0	NW_004955417	16,776,674 - 16,923,058 (+)	NCBI	ChiLan1.0	ChiLan1.0

PKHD1L1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	126,738,261 - 126,903,597 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	102,259,302 - 102,424,587 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	106,012,498 - 106,180,653 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	108,158,018 - 108,325,730 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	108,158,087 - 108,322,665 (+)	Ensembl			panPan2	panpan1.1

PKHD1L1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	9,925,047 - 10,073,054 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	9,926,156 - 10,070,253 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	9,915,984 - 10,063,709 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	10,207,124 - 10,354,752 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	10,207,185 - 10,352,194 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	9,948,489 - 10,096,179 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	10,065,464 - 10,213,211 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	10,155,024 - 10,302,902 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Pkhd1l1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	28,058,700 - 28,198,415 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	35,484,995 - 35,624,465 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936470	35,484,857 - 35,624,504 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PKHD1L1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	28,025,587 - 28,176,361 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	4	28,023,448 - 28,176,331 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	30,266,239 - 30,406,476 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PKHD1L1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	104,072,701 - 104,230,809 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	104,073,327 - 104,230,960 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666039	36,343,430 - 36,502,489 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pkhd1l1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624763	8,459,661 - 8,608,838 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624763	8,459,642 - 8,610,164 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Pkhd1l1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	218,962,578 - 219,111,912 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Pkhd1l1
2102 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	299
Count of miRNA genes:	186
Interacting mature miRNAs:	218
Transcripts:	ENSRNOT00000005958, ENSRNOT00000057146
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10053722	Scort27	Serum corticosterone level QTL 27	2.41	0.0083	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	7	45113903	90113903	Rat
2317035	Aia16	Adjuvant induced arthritis QTL 16	2.71		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	7	71103011	106126789	Rat
1300127	Srn1	Serum renin concentration QTL 1	3.87		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	7	24179478	86817926	Rat
1357336	Gluco6	Glucose level QTL 6	3.4		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	7	51700643	96700643	Rat
1358361	Sradr5	Stress Responsive Adrenal Weight QTL 5	5.55		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	7	31770293	110435881	Rat
1298525	Cm1	Cardiac mass QTL 1	2.7		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	7	56625161	101625161	Rat
1357338	Stl17	Serum triglyceride level QTL 17	3.23		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	71621154	114982716	Rat
70159	Bp61	Blood pressure QTL 61		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	73618702	118618702	Rat
631513	Scl7	Serum cholesterol level QTL 7	4.1		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	7	39845902	84845902	Rat
10755453	Coatc12	Coat color QTL 12		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	32998702	77998702	Rat
631504	Cm27	Cardiac mass QTL 27	3.45		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	7	46307490	127866166	Rat
7411605	Foco14	Food consumption QTL 14	24.1	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	36178764	81178764	Rat
1300151	Bp181	Blood pressure QTL 181	3.36		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	7	55498584	105834451	Rat
1559283	Emca4	Estrogen-induced mammary cancer QTL 4	3.7		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	7	63889858	108889858	Rat
1643004	Pain2	Pain QTL 2	1		mechanical nociception trait (VT:0002734)	self mutilation severity score (CMO:0002145)	7	10112916	99900612	Rat
738030	Anxrr8	Anxiety related response QTL 8	4.1		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	48475049	93475049	Rat
1300149	Cm6	Cardiac mass QTL 6	4.09		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	7	1	104117804	Rat
631534	Lnnr1	Liver neoplastic nodule remodeling QTL 1	3.85	0.001	liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)	7	36178764	81178764	Rat
631201	Panci1	Pancreas inflammation QTL 1	0	0.001	pancreas integrity trait (VT:0010560)	percentage of study population displaying chronic pancreatitis at a point in time (CMO:0001214)	7	73557047	118557047	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	1509236	116977875	Rat
61357	Bp38	Blood pressure QTL 38	1.6	0.052	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	40540077	123682549	Rat
2316947	Rf58	Renal function QTL 58	7.8		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	7	49682832	115766396	Rat
10450862	Kidm55	Kidney mass QTL 55	4.9		kidney mass (VT:0002707)	kidney weight (CMO:0000081)	7	72725037	117725037	Rat
1298528	Bp169	Blood pressure QTL 169		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	62963207	107963207	Rat
1300132	Bp182	Blood pressure QTL 182	3.49		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	21541977	86817926	Rat
1576303	Ept7	Estrogen-induced pituitary tumorigenesis QTL 7	3.7		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	7	63889858	108889858	Rat
10450856	Livw4	Liver weight QTL 4	3.8		liver mass (VT:0003402)	liver weight (CMO:0000092)	7	72725037	117725037	Rat
2316955	Stl24	Serum triglyceride level QTL 24	7.1		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	7	49682832	115766396	Rat
2316952	Pur22	Proteinuria QTL 22	5.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	7	49682832	115766396	Rat
2303582	Gluco53	Glucose level QTL 53	3		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	7	48603087	93603087	Rat
631540	Bw9	Body weight QTL 9	4.5		body mass (VT:0001259)	body weight (CMO:0000012)	7	71621154	119349044	Rat
1358891	Bp265	Blood pressure QTL 265	2.21		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	71827901	136544683	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
11	12	67	135	91	90	59	64	59	6	317	164	11	113	75	92	31	4	4

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001034931	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079161	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AI030678	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC105757	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BF551112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BQ196166	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB713515	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB789394	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CK600919	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DY546293	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EV777124	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FM096644	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FM100521	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FM106180	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FM120324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000005958 ⟹ ENSRNOP00000005958

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	77,505,152 - 77,679,994 (+)	Ensembl
mRatBN7.2 Ensembl	7	75,620,484 - 75,795,333 (+)	Ensembl
Rnor_6.0 Ensembl	7	83,373,080 - 83,545,540 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000057146 ⟹ ENSRNOP00000053974

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	77,505,152 - 77,559,642 (+)	Ensembl
mRatBN7.2 Ensembl	7	75,620,484 - 75,674,977 (+)	Ensembl
Rnor_6.0 Ensembl	7	83,373,022 - 83,427,435 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000100813 ⟹ ENSRNOP00000092223

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	75,620,484 - 75,795,335 (+)	Ensembl

RefSeq Acc Id:

NM_001034931 ⟹ NP_001030103

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	77,505,152 - 77,679,994 (+)	NCBI
mRatBN7.2	7	75,620,484 - 75,795,333 (+)	NCBI
Rnor_6.0	7	83,373,022 - 83,548,944 (+)	NCBI
Rnor_5.0	7	83,387,129 - 83,563,775 (+)	NCBI
RGSC_v3.4	7	80,324,195 - 80,499,655 (+)	RGD
Celera	7	72,604,222 - 72,765,134 (+)	RGD

Sequence:

show sequence

GCACAGGCAGCTTCTGCAATCAAGCGACTGGTGCAGACTCTGCAGCACCAGCTCTGCGATGGGA
CACCTGTGGCTCTCAGGGACCTGGTTTCTCTTTGGGTTGCTTTGGTGTGCAGCAGATTCTCACA
CAGGTACCTCTGAGACAGTCCCCAAAGTGACAGAAGTTATACCTAAATATGGCAGCATAAACGG
AGCAACAAGACTGACCATCAAGGGAGAAGGTTTTTCTCAAGCAAGTCAGTTCAACTATGGAGCT
GACAATATTGAACTGGGAAACCATGTGCAATTAGTTTCTTCTTTCCAGTCAATTACTTGTGATG
TGGAAAAAGATTCAACTCATTCAACTCAAATTACATGCTATACTAGAGCAATGCCAGAAGATGT
CTACTCTGTCAGAGTCAGTGTGGATGGAGTGCCGGTTGCAGAAAATAATACTTGCAAAGGGGTC
GTCAGCAGCTGGGCGTGCAGTTTCAGTACGAAACGTTTTAGAACTCCCACAATAAGGAGCATCA
CACCTTTATCTGGGACTCCAGGTACATTAATAACAATTCAAGGCAGGCTCTTCACTGATGTCTA
TGGAAGTAATACAGCACTGAGCTCAAATGGAAGGAATGTTAGGATTTTAAGAACTTATATTGGA
GGAATGCCCTGTGAACTCCTCATACCACATTCTGATGATTTGTATGGTCTGAAGCTCGATCACC
CCAGTAGAGATACAGGGTCTGTGACATGTAAGGCCACTGGGACTTACATTGGTCATCACAATGT
CAGCTTCATCTTAGATAGTGATTATGGAAGGAGTTTCCCAGAGAACACGACATACTTTGTTTCC
TCTCTCAATAAAATTTCAATGTTTCAAACATATGCAGAGGTCGCGATGGTTTCACCGTCTAAGG
GCAGCCCAGAAGGTGGCACCATATTGACAATACATGGGCAGTTCTTCGATCAGACTGATCTCCC
AGTGAGAGTGCTAGTTGGAGGCCAAGCCTGTGACATTTTGAATGTCACAGAAAATACTATATAC
TGCAAGACTCCTCCCAAACCACATGTCCTCAAAGCCACATATCCAGGTGGAAGAGGACTAAAAA
TTGAGGTTTGGAATAATAGCCGGCCAACACATCTTGAAGATATACTTGAATACAGCGAGCAAAC
CCCAGGGTACATGGGTGCCAGTTGGACAGATTCTGCTTCCTATGTTTGGCCCATAGAACAAGAC
ACATTTGTTGCACGCATTAGTGGATTTTTGGTGCCTCCAGATTCTGATGTTTATAGGTTTTATA
TCAGAGGTGATGACCGCTATGCTATTTATTTCAGTCAAACTGGGCACCCAGAGGACAAGGTGAG
GATTGCATATTACTCTAGAAATGCCAACACTTACTTTTCAAGTTCAACACAAAAATCAGATGAG
ATTCATCTTCAGAAAGGAAAAGAATATTACATTGAGATCTTGCTGCAAGAGTATACATTGAGTG
CTTTTGTTGATGTTGGACTGTACCAGTATAAAAGTGTCTTTACTGAACAGCAGACAGGAGATGC
ACTAAATGAAGAACAAGTCATCAAATCTCAGTCAACAGTTATCCCGGAAGTACAGATTATAACA
TTGGAAAACTGGGAGACAGCTGATGCGATTAAGGAAGTCCAGCAGGTCACAGTAACCAGCCCAT
GTGTGGGAGCAAACTCATGTTCACTTTCCCAGTACAGATTCATCTACAACATGGAAAAGACTGT
CTGGCTGCCTGCTGATGCTTCTGCCTTCATGTTGCAATCAGCTTTAAATGACCTTTGGTCTATA
AAACCAGATTCAGTTCAGGTGACCAGCAAGAGGGATCTCCAGAGTTATATCTACACAATAACCT
TTGCATCAACTAGAGGAGACTTTGATCTGCTTGGTTATGAAGTATTTGAAGGGAGTAATGTCAC
GCTGAATATCACAGAACACACCAAAGGAAAACCCAATTTGGAGACATTCACATTAAACTGGGAT
GGGATTGCGTCTAAGCCTCTTACCCCAGAGTCATCAGAAGCTGAATTTCAGGAAGCTGTGGAAG
AGATGGTGAGCGCCAAGTGTCCACCAGAAATAGCACATCTGGAAGAAGGATTTCTAGTGAAATA
CTTCAGAGACTATGAAACTCATTTTGAACTGGAACATAATAATAGAGCGCAGAAGACGGCCGAG
ACAGATGCATTCTGTGGCCGTTACTCCCTGAAAAACCCAGCTGTTCTTTTTGACTCAACAGATG
TCAAGCCAAACAAATTACCATATGGAGACATTTTATTATTTCCTTATAATCAGCTGTGTTTAGC
ATACAAAGGATCTCTGGCCAACTTCATTGGTCTGAAGTTCAAGTATGAAGACAGTGGCAAGATC
ATTAGAAGTGCTGATATGCAATTTGAATATAACTTTGCTTCTGGAAATAAATGGACCTACACTT
GCATAGATCTTCTAGATTTCTTACAAACCAAATATGCTGGGACAAGTTTTTCTCTACAAAGAAT
TAGCTTACAAAAGTCATCAGAATTCCAATCCATTTATGTGGATGCCGTGTACATTGGACAGATA
CCTACAGTCTCAGTCTTGGATGAAATGCCAAAGCGAAGACCTCCAGCATTAGCAAACAGAGGAA
TATTTTTAAAGCATTTTCAGGTTGACCAGACCAAATTAAGTGAATCAGCTCTGACAATTCAGTA
TTCAATTACCATAAGTTTCTATAACTGCAGTCATAATATACCAATGATGGGTGTGAGCTTTGGG
CAGATAGTCACAAACGAGACAAAGAACGAGTCGGTTTACAGAGGAAATAATTGGCCAGGGGAGT
CAAAGATTCGTATTCGAAAAATTCAAGAAGCTTCTCCACCTGTAAGTGGCAGCTTTGATATTCA
AGTTCATGGACATACCCTGAAAGGCATCCCTGCCGCTGTGCCAGCCGCAGACTTGCAGTTCGCC
CTGCAGAGCCTGGAAGAAATAGAACGAGTGTCAGTAAGCAGAGAGGGAACCTGTGCAGGCTACT
CGTGGAGCATCAACTGGAAAAGCCCCTGTGGAAAGCAGCCTCTTCTGCAGATCAATGATTCCAA
CATTCTTGGAGAAAAGGCTAGTGTGACAGTTACCTCAATAAAGGAAGGTGGTTTATTTAGACAA
CGTATACCTGGAGACATGCTTCGTACACCTAATCAACAACCACAGGTTGAAGTCTATGTCAATG
GAATTCCAGCCAAATGTTCAGGTGACTGTGGGTTTACATGGGATGCCATGATTACTCCCCTGAT
CTTGACAACAACACCTTCTGAAGGCTCCTATGCAGAAAGCACGATTCTAACCATAGCAGGCTCT
GGATTCTCTCCCACCTCTGCTGTATCGGTCTCTGTTGGGTCTACCCAATGCTCTCTTCTTTCTG
TGGAGGAAAATGAGATCAAGTGCCAGATTCTGAATGGAAGTGCTGGACATGTACCAGTTGCTGT
GTCCATTGCTGGTGTTGGACTAGCACAGAATCTAGAGGGTGAGGGATCCCACTTCGTTTATCAG
AGTCAGATCTCACATGTCTGGCCTGATTCTGGAAGCCTGGCAGGTGGTACTCTGCTGACAATAT
CTGGATTTGGATTTAGTAAAAATTCAACTGTTTTAGTTGGAAATGAAACCTGCAATGTGATTGA
AGGAGATTTGAATAGAATTACCTGCAGAACATCAAAAAGAATTGAGGGTACAGTTGATATTTCT
GTCATTACCAATGGAATTCAAGCCACATCAAAGGATAGTTTTAGTTACAGCTGCTTGCAAACAC
CAGTTGTCACTGACTTCAGCCCAAAAGAACGGACAATTCTGGGAACTGTCAATTTAACAATTAA
GGGTTATAACTTTGGAAGTGAACTCACACAAAATACGGTGTACGTTGGAGGAAAACACTGCCAG
ATTCTTCACTCGAACTTCACAGACATCACATGCCTTCTGCCCACGTTGCCTCCAGGAAAACATG
AGATCTATGTCAAAGTCAGAAACTGGGGTTTGGCATCAACGAGGAACAAGTTAAATGCTTCTAT
ACTGTACATTTTGGAAGTCACCCACATGTTTCCCCAGAGAGGCTCTTTGTATGGTGGCACTGAA
ATCACTATAATAGGTTCTGGATTCAGCACAATACCAACTGAGAATTCTGTTCTCTTAGGTTCCT
TCCCATGCGACATTACATCATCATCAGAAAATGTCATCAAATGCACTCTCCATTCAACAGGGGC
TGTATTCAGAATTACCAACAACGGTTCACACTTAGTGCATGGACTAGGTTATGCCTGGTCACCA
TCGGTCTTAAATGTGACTGTGGGCGATACTGTGGTATGGTACTGGCGAGCCCACCCCTTTCTTA
GGGGTATAGGGTACAGAATTTTCTCAGTCTCCAGTCCTGGAAGTGTTACTTATGATGGCAAAGG
ATTTACAAATGGAAGACAAAAATCTGCATCAGGTTCATTTTCTTACCAGTTTACTTCTCCTGGA
GTCCATTACTACAGCAGCGGGTATGTTGATGAGACTCACTCCATATCTCTCCAAGGAGTCATTA
ACGTTGTTCCAGCTGAAACCAGGCACATTCCCCTGCACCTGTGTGTGGGAAACATTGAAGCGAC
ATATGTTCCAGCAGGTCCTGTGCATTTACCCTTGGCAAGTACTGCATCAGGCTGCCTAGCAACA
GAACCCCTGTGTGGCCTGAATGATACAAGGGTTAAACATTCAAATAAATTATTCTTCGAGCTTT
CAAATTGCGTTTCACCCTCTATAATCAACATTACTCCCTCTACCGGAACAGCAAATGAACTCAT
AACTATCACTGGACATGGCTTCAGTAATCTTACATGTGCTAATAAGGTTACAATTGGTAGCTAC
CCTTGTGTTGTAGAGGAAAGTAATGAAAATTCTATTATGTGTCATATTGACCCTCAAAACTCAA
TGGATGTTGGCATTAGAGAAATTGTTACTTTGATTGTCTACAACCTGGGCACTGCTATCAACAC
ACAGCCCAATGAATTTGACAGGCGGTTTGTACTTTTGCCAAACATAGATTTGGTGATGCCAAAA
GCAGGGTCAACTACAGGATTGACAAGAGTGACCATTCAAGGTTCTGGATTTATGGCTTCTTCTG
CAGGTGTAGAAGTCTTTATGGGTGATTTTCCATGTAAAGTTCTAAATGTGACCTACACAGCTAT
TGAATGTGAAACATCTCCTGCTCCCCATCAGCTTGTTCTTGTAGACCTTCTAATACATGGAGTG
CCTGCCCAATGTCAGGGCAACTGCAGCTTTTCATATTTAGATAACATTGCTCCTTATGTAACAG
GAGTCTTTCCAAACTCAATCCAAGGATCTGGAAGTGTCCTTATCATAGGAGAGGGTTTTGGAAC
AGTGTTGGAAGAGATTTCTATATTTATTGGAATTCAAAAGTTCAGAGTACTAGATGTTAATGAA
AATAATATTACTGTTCTCATGACTCCACTAGCAGCTGGACTTCATTCTCTCAGTGTTGTTGTTG
GGTCTAAGGGCTTGGCTCTGGGAAATCTAAGTGTCAGCAGCCCTGCAGTAGCGTCTGTCTCACC
AACCTCTGGAAGCATTGCTGGTGGAACGACTTTGATGATCACAGGCAACGGCTTTTCTCCTGGA
AACACCACGGTTACTGTTGGGGATCAGCCTTGTCAAATTATGTTCATCAACTCCAGTGAGGTCC
ACTGCAGCACCCCAGCTGGGAGAGCTGGTACAGCCAATCTGAAGATCGATGTCAATTCAGTCAT
TTACCCATCTTTGTCATTTACATATGCCATGGAGGATACTCCATTTCTCAAAAGTATCATCCCA
AACTCAGGTCCGCCGGGAACTGAAGTTGAAATAACTGGGTCTAATCTTGGATTTGCTGTCTCCG
ATGTTTTAGTGATGATAAAAGAGAGTGTATGTAACGTGACCACTGTCAATGACACTGTGCTACA
GTGCATTGTGGGAGAACATGCAGGGGGCATTTTCCCTGTGATGATGCTTCATAAGACAAAAGGC
TCTGCCATCTCTTCTGTTGTATTTGAGTACCCGTTTTCTATTCAGAGTATTTCTCCAAGAAAAG
GGAGCTTTGGTGGTGGGCAAACCTTAACTGTAACAGGCATGGGATTTGATCCTTGGAATTCAAC
TATATTGGTCGGTGGCTCTGAATGTGCAGTTGACAAACTTTTATCTAACTCTACAACATTGTTT
TGTGAGATTCCACCTAATAACGGCAAGGGACCTGATCAAGCCTGTGGAGTGAGTGTGGTCAACG
GGAAAGACTCATCTCAATCTGTGACGCTATTTACATACATGCTGTCCCTGACTCCACTCATCAT
TGAAGTATCTCCCAGGAGAGGCAGCACTGCCGGGGGCACCCGGCTTACAGTCACAGGATCTGGA
TTCAGTGAAAACACAGAGGATGTTCAAGTCACCATAGCCAACAGCAAATGCGACGTCCAATATT
CCAACAAGACACATATCGTCTGCATGACAAGTGCTCATGCTCCTTCAGGATGGGCTCCAGTTCT
TGTCAACATCAAAAACATTGGCGTGGCCAAATTGGAGAATGCTGACTTCTTATATGCAGATGTT
TGGTCTGCCAACTCCTCATGGGGAGGAAAACTTCCACCAGAGGAAGGGTCACTTGCTGTTATTA
CAAAAGGACAGATAATTCTGCTGGACCAAAGTACTCCTATTCTGAAAATGTTACTCATTCAAGG
TGGGACTCTAATATTTGATGAAGCTGATATAGAACTCCAGGCAGAAAATATACTAATCACAGAT
GGGGGAGTTCTTCAGATTGGGACAGAAGCATTTCCATTCCAACACCAAGCTGTCATTACTCTTC
ATGGTCATCTTAGATCTCCTGAGCTGCCTGTGTATGGAGCTAAGACATTGGCTGTGCGAGAGGG
CACACTGGATCTTCACGGTCTGCCTATTCCTGTGGTCTGGACTCGCTTGGCTCACACTGCAAAT
GCAGGAGAATGGACTTTAACTGTACAAGAAGCGGTGACATGGAAGACAGGAGATAGCATTGTGA
TTGCAAGCACAGGACACAGACACAGTCAAGGAGAAAATGAGAAACGGACCATTGCATCGGTGTC
TGCTGACGGGATGCACATAACTCTAACTAGGCCACTAAACTACACACACTTGGGAATCACCACC
ACACTTCCTGATGGAACTGTGTTTGAAGCTAGGGCAGAGGTTGGAATTCTTACAAGAAATATCT
TAATAAGAGGGTCTGAAAATGTGGAGTGGAATGACAAGATCCCATCATGCCCTGATGGATTTGA
CACAGGAGAATTTGCTACACAAACATGCCTTCAAGGAAAGTTTGGAGAAGAAATGGGAAGTGAT
CAGTTTGGAGGCTGTATTATGTTGCATGCCCCTTTACCTGGGGCTGACATGGTAACTGGAAGAA
TAGAATATGTAGAGGTGTTTCATGCTGGCCAATCTTTCCGTTTGGGACGATACCCAATACATTG
GCACCTGCTTGGAGATTTACAGTTCAAATCGTATGTGAGAGGCTGTGCAATTCATCAAGCATAC
AACAGAGCTGTTACAATCCACAATACACATCACCTTCTTGTGGAGAGGAATATTATATATGATA
TAAAGGGAGGGGCATTTTTCATAGAAGATGGTATTGAACATGGCAACATTCTACAATATAATCT
GGCAGTGTTTGTACAGCAAAGTACCAGCCTATTAAATGATGATGTGACCCCAGCTGCATTTTGG
GTAACCAACCCTAACAACACCATACGACACAATGTGGCTGCTGGTGGCACTCACTTTGGCTTTT
GGTACAGAATGAATGACCACCCCGATGGCCCATCTTTCAACCGAAACATTTGCCAAAAACGAAT
TCCACTTGGAGAATTCTATAACAATACTGTTCATTCTCAGGGGTGGTTTGGACTGTGGATTTTT
GAAGAATATTTTCCCATGCACACAGGATCTTGTACTTCTACAGTGCCGGTGCCTGCTGTCTTTA
ATTCACTCACTGTCTGGAACTGTCAAAAAGGAGCTGAATGGGTCAATGGAGGAGCCCTGCAGTT
CCACAACTTTGTGATGGTGAACAACTATGAGGCTGGAATTGAGACCAAGAGAATCCTGGCTCCC
TATGTTGGGGGATGGGGGGAAAGCAATGGAGCTGTGATTAAAAATGCCAAAATCGTTGGTCATC
TTGATGAGCTGGGAATGGGATCCACATTTTGCACCTCAAAAGGCCTGGTTCTCCCATTTAGTCA
AGGCCTGACGGTGTCATCTGTACACTTTATGAATTTTGACCGCCATGCCTGTGTGGCTTTAGGA
GTAACATCAATCACTGGGGTGTGTAATGACAGATGTGGAGGCTGGAGTGCCAAGTTTGTTGACA
TCCAGTATTTTCATGCACCGAATAAGGCAGGCTTTCGATGGGAACACGAAGCAGTACTGATTGA
TGTTGATGGATCACTAACAGGGCACAGAGGCCACACTGTCATTCCACACAGCCCCTTACTGGAC
CCTTCACACTGCACTCAAGAGGCTGCATGGAGCATTGGTTTTCCTGGCTCCGTCTGCGACGCCT
CTGTCAGTTTCCACCGTTTAGCATTCAACAAGCCGTCTCCAGTATCTCTACTTGAAAAAGATGT
GGTTCTCTCAGACTCTTTTGGCACTAGCATCGTTCCCTTTCAGAAGAAGCGACTGACCCATATG
TCAGGGTGGATGGCTCTGATTCCAAACGCAAATCACATAAACTGGTATTTTAAAGGGGTGGAGC
ACTTAACCAACATATCATACACTTCCACATTCTATGGATTTAAGGAAGAAGACTATGTAATTAT
ATCACATAACTTCACTCAAAATCCTGATATGTTTAATGTTGTTGATATGAGGAATGGCTCTTCA
AATCCACTGAATTGGAATTCTAGCAAGAATGGTGACTGGCATCTCGAAGCAAACACCAGCACTC
TCTATTACTTGGTGTCAGGGAGAAGCGACCTTCCTCAGAGTCAGCCCATCTCTGGGACCCTAGA
TCCTGATGTAAAGGATGTGATTATTAATTTCCAAGCTTACTGCTGTGTTCTCCAAGACTGCTTT
CCAGTTCATCCACCATCAAAAAAAACAATTCCCAGGAAACGGCCAGCCACTTACAATTTATGGT
CAAATGAGTCCTTTTGGCAATCATCCCCAGAGAACAACTATACTGTACCTCGCCCAGGAGCAAA
TGTAATTATTCCTGAAGGAACATGGATTGTAGCTGACATGGATATACCTCCAATGGAAAAACTT
ATTATTTGGGGAGTTCTAGAAATGGAAGATAAATCTGAGGTGGGAGCTGCAGGCCCTGCTTATA
GAAAAGTTGTTTTAAATGCCACCTACATATCAGTGCAGGGAGGGAGATTAATTGGTGGCTGGGA
AGATAACCCTTTTAAAGGAGAATTACAGATTGTTCTTCGAGGGAATCATTCTACCCCAGAATGG
GCTCTTCCAGATGGACCAAATCAAGGGGCAAAGGTCTTAGGAGTGTTTGGTGAGCTGGACCTGC
ATGGACTTCCACATTCAGTTTATAAAACTAAACTGTTGGAAACTGCGGAGGCAGGTTCCAAAAT
CTTATCTCTGGTGGATGCTGTGGATTGGCAGGAGGGAGAAGATATTGTGATAACTACCACGAGC
TATGATTTACATCAGACGGAGATCAGAAGGATTGCTAAAGTCCTACATGGGCGCAAAGTTCTCA
TCCTCAATGATAGCCTTTCCTACACGCACCTTGCTGAAAGACAGTGGATCCCTGAAACAAGTCA
GAGCTACACGTTATCAGCTGATGTCGGGATACTGAGTAGGAACATCAAAATAGTTGGTGAAGAT
TACTCAGTTTGGTCCAAGGACTCTTTTGGTGCACGGATCCTAGTTGGCTCATTCACTGGAAACA
TGATGACATTTAAGGGAAATGCAAGAATCAGTAATGTGGAATTTTATCACAGTGGTCAAGAAGG
CTACAGAGACAGTACAGATCCAAGATACGCTGTGACATTTCTTAACCTGGGACAGATCCAAGAT
CATGGCTTGTCTTATGTTCGAGGCTGTGCGTTTCATCATGGCTTCTCCCCAGCAATTGGTGTGT
TTGGGACCAATGGGGTAGACATAGATGACAACATCATCTACTTTACAGTAGGAGAAGGTATAAG
AATATGGGGGGATGCCAACAGAGTACGTGGAAATTTGGTCACCCTTTCAGTTTGGCCAGGAACC
TACCAGAACAGAAAAGACTTGAGTTCGACACTTTGGCACGCAGCAATTGAGATAAACAGAGGGA
CCAATACAGTCTTACAAAACAACATAGTTGCTGGATTTGGAAGAGTAGGATACCGCATTGATGG
TGAACCATGCTCGAGTCAGGCTAATCCCATGGAAAACTGGTTTAACAATGAAGCCCATGGGGGT
CTGTATGGTATCTACATGAACCAAGATGGCCTTCCTGGTTGTTCCCTTATACAAGGATTTACCA
TTTGGGCATGCTGGGATTATGGAATTTATTTTCAGACCATGGAGAGTGTGCACATCTACAACGT
GACCCTAGTAAACAACGGGATGGCCATCTTTTCAATGATCTACATGCCATCTTCTGTGTCCCAC
AAAGTTTCCAGTAAAACAGTAAGAATTAAGAACTCATTGATTGTTGGAAGTAGCCCTGAGTTTA
ACTGCTCTGACATCTTAACTAATGACAGTCCTGATGTAGAACTCACTTCTGCACATCGAAGTTC
TAGGCCCCCATCAGGTGGAAGAAGTGGGATTTGCTGGCCAACATTTGCTTCAGCTCATAACATG
GCACCGCGAAAGCCTCATGCTGGAATCATGAGTTACAATGCCATCAGTGGCCTTTTGGATGTCT
CAGGTTCAACGTTTGTTGGATTTAAGGATGTTTGTTCAGGAGAAACTAATGTGATATTCATTAC
TAATCCTTTAAATGAAGATTTACAGCATCCAATCCATGTGAAGAATGTACAACTTGTTGACACA
ATTGAACAATCCAAAGTGTTTATACATAGACCTGATATAAGTAAAGTGAACCCATCTGATTGTG
TGGACATGGTTTGTGATGCCAAGAGAAAATCTTTTCTGAAAGACCTAGATGGTTCCTTTCTGGG
GAATTCTGGGTCAGTGATCCCCCAAGCAGAGTATGAGTGGGATGGAAACAGTCAACTTGGAATC
GGAGACTACAGAATTCCCAAAGCAATGCTCACATTCTTGAACGGAAGTAGAATTCCTGTCACTG
AGAAAGCACCTCATAAAGGGATTCTTAGAGATGCAACCTGTAAGTACATCCCAGAGTGGCAGAG
CTATCAGTGTTTGGGAATGGAATATGCAATGATGGTAATAGAAAGCCTGGACTCTGACACAGAG
ACACGAAGACTTTCCCCGGTGGCTATCATGAGCAATGGTTATGTTGATCTCATTAATGGCCCCC
AGGACCATGGCTGGTGTGCAGGGTATACATGCCAAAGAAGACTGTCTCTGTTCCATGGCATAGT
GGCTCTGAACAAAACATATGAGGTTTACTTCACCGGGACCAGTCCTCAGAATCTTCGGCTGATG
TTGCTTAATGTTGAATTTAATAAGGTGGTTCTAGTAGGAATATTTTTTTCCACACTTCAACGTT
TGGATGTCTATGTGAACAATTCCTTGGTCTGTCCTAAAAATACAGTATGGAATGACCAAAAGAA
ACACTGTGAACTTGAAAGGCATCTGAACACAGAACAATTTCTTCCTAACTTGGGTTCCACTGTC
CCTGGTGAAAACTACTTTGATAGAACCTACCAGATGCTGTACCTTTTGTTGAAAGGAACTACAC
CTGTAGAGGTCCACACTGCTACTGTCATCTATGTATCTTTCCAACTGCCAGCTATGACAGCTGA
TGAGTTTTTCAGCTCAAACAATCTGGTTAGAAATCTTGCCTTGTTCCTAAAAATACCGAGTGAC
AAAATCCGTGTCAGCAGAATAATAGGAGCAAGTCTGCGAAGGAAGAGATCCACAGGACGCATAA
TGGAATTTGAGATTGGGGCTGCTCCTACTCGGTTCTTAAGCAATTCTACCACAGGTCAAATGCA
ATTGTCTGAGCTCCAGGAAATCACTGGCTGTCTTGGACAAGCTGTCATCTTAGGAAAAATTAGT
ACTATCCTTGGATTCAATATTTCTTCCATGTCGATTACAAGTCCCATCCCCCAACCAACTGATT
CTGGCTGGATTAAGGTGACTGCCCAGCCAGTTGAAAGGTCTGCATTTCCTGTTCATTACCTGGC
CCTTGTGTCTTCACTCTCAGTGGTTGCTCAGCCAGTGGCAACACAACCAGGACAGCCATTTTCT
CAGCAGCCCTCAGTAAAGGCAGTGGATCCTGAGGGCAACTGTGTATCAGTTGGAATTACGTCAC
TTACTTTGAAGGCTATCCTAAAAGACTCCAATAATAACCAAGTTGGTGGCCTTAGTGGAAATAC
AACAATTCCATTTATCACCTGTTGGGCCAACTATACAGACCTCACTCCTCACAGAACAGGAAAA
AATTATAAAATTGAGTTTGTCCTGGATAATAGTGTTCGTGTGGAATCTAGACCCTTCAGCCTGT
CAGCACAGACTGTCCCTGGTGGCAGTGGCAGCAGCAGCAGCAGTGGTCACAGCAAAGCGTCCTC
TGTGGGGACACCTGTCCAGACACTGGCTATCGTTATAGGGTGTCTTGTAGGAAGACTATTGCTC
TTAGAAGTATTTATGGCTACAGTTTTCATTTTGAAGACAACCATAGAAAGCAACTGAAGTGCCT
TCCTGAAGAACGGGCTGAAAGCAAAACTGGATCGATGCTCATGCATCCACTACTTGGCTGCACA
ACAAGAAAAAGCCTACACAATTTTCAAGGAAATATTGCTAAAGTATTTTTGTAATATTTGACAT
ATAAACATTACATTTAGTCAAAAAGTTCAGGTTTCTACAAAATAAAAAACGTTTTTTTGTCAAA
AAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039079161 ⟹ XP_038935089

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	77,505,063 - 77,679,994 (+)	NCBI
mRatBN7.2	7	75,620,384 - 75,795,335 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001030103	(Get FASTA)	NCBI Sequence Viewer
	XP_038935089	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI05758	(Get FASTA)	NCBI Sequence Viewer
	EDM16306	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000005958
	ENSRNOP00000005958.8
	ENSRNOP00000053974.5

RefSeq Acc Id:	NP_001030103 ⟸ NM_001034931
- Peptide Label:	precursor
- UniProtKB:	D4A9R2 (UniProtKB/TrEMBL), A0A8I6AHF3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGHLWLSGTWFLFGLLWCAADSHTGTSETVPKVTEVIPKYGSINGATRLTIKGEGFSQASQFNY GADNIELGNHVQLVSSFQSITCDVEKDSTHSTQITCYTRAMPEDVYSVRVSVDGVPVAENNTCK GVVSSWACSFSTKRFRTPTIRSITPLSGTPGTLITIQGRLFTDVYGSNTALSSNGRNVRILRTY IGGMPCELLIPHSDDLYGLKLDHPSRDTGSVTCKATGTYIGHHNVSFILDSDYGRSFPENTTYF VSSLNKISMFQTYAEVAMVSPSKGSPEGGTILTIHGQFFDQTDLPVRVLVGGQACDILNVTENT IYCKTPPKPHVLKATYPGGRGLKIEVWNNSRPTHLEDILEYSEQTPGYMGASWTDSASYVWPIE QDTFVARISGFLVPPDSDVYRFYIRGDDRYAIYFSQTGHPEDKVRIAYYSRNANTYFSSSTQKS DEIHLQKGKEYYIEILLQEYTLSAFVDVGLYQYKSVFTEQQTGDALNEEQVIKSQSTVIPEVQI ITLENWETADAIKEVQQVTVTSPCVGANSCSLSQYRFIYNMEKTVWLPADASAFMLQSALNDLW SIKPDSVQVTSKRDLQSYIYTITFASTRGDFDLLGYEVFEGSNVTLNITEHTKGKPNLETFTLN WDGIASKPLTPESSEAEFQEAVEEMVSAKCPPEIAHLEEGFLVKYFRDYETHFELEHNNRAQKT AETDAFCGRYSLKNPAVLFDSTDVKPNKLPYGDILLFPYNQLCLAYKGSLANFIGLKFKYEDSG KIIRSADMQFEYNFASGNKWTYTCIDLLDFLQTKYAGTSFSLQRISLQKSSEFQSIYVDAVYIG QIPTVSVLDEMPKRRPPALANRGIFLKHFQVDQTKLSESALTIQYSITISFYNCSHNIPMMGVS FGQIVTNETKNESVYRGNNWPGESKIRIRKIQEASPPVSGSFDIQVHGHTLKGIPAAVPAADLQ FALQSLEEIERVSVSREGTCAGYSWSINWKSPCGKQPLLQINDSNILGEKASVTVTSIKEGGLF RQRIPGDMLRTPNQQPQVEVYVNGIPAKCSGDCGFTWDAMITPLILTTTPSEGSYAESTILTIA GSGFSPTSAVSVSVGSTQCSLLSVEENEIKCQILNGSAGHVPVAVSIAGVGLAQNLEGEGSHFV YQSQISHVWPDSGSLAGGTLLTISGFGFSKNSTVLVGNETCNVIEGDLNRITCRTSKRIEGTVD ISVITNGIQATSKDSFSYSCLQTPVVTDFSPKERTILGTVNLTIKGYNFGSELTQNTVYVGGKH CQILHSNFTDITCLLPTLPPGKHEIYVKVRNWGLASTRNKLNASILYILEVTHMFPQRGSLYGG TEITIIGSGFSTIPTENSVLLGSFPCDITSSSENVIKCTLHSTGAVFRITNNGSHLVHGLGYAW SPSVLNVTVGDTVVWYWRAHPFLRGIGYRIFSVSSPGSVTYDGKGFTNGRQKSASGSFSYQFTS PGVHYYSSGYVDETHSISLQGVINVVPAETRHIPLHLCVGNIEATYVPAGPVHLPLASTASGCL ATEPLCGLNDTRVKHSNKLFFELSNCVSPSIINITPSTGTANELITITGHGFSNLTCANKVTIG SYPCVVEESNENSIMCHIDPQNSMDVGIREIVTLIVYNLGTAINTQPNEFDRRFVLLPNIDLVM PKAGSTTGLTRVTIQGSGFMASSAGVEVFMGDFPCKVLNVTYTAIECETSPAPHQLVLVDLLIH GVPAQCQGNCSFSYLDNIAPYVTGVFPNSIQGSGSVLIIGEGFGTVLEEISIFIGIQKFRVLDV NENNITVLMTPLAAGLHSLSVVVGSKGLALGNLSVSSPAVASVSPTSGSIAGGTTLMITGNGFS PGNTTVTVGDQPCQIMFINSSEVHCSTPAGRAGTANLKIDVNSVIYPSLSFTYAMEDTPFLKSI IPNSGPPGTEVEITGSNLGFAVSDVLVMIKESVCNVTTVNDTVLQCIVGEHAGGIFPVMMLHKT KGSAISSVVFEYPFSIQSISPRKGSFGGGQTLTVTGMGFDPWNSTILVGGSECAVDKLLSNSTT LFCEIPPNNGKGPDQACGVSVVNGKDSSQSVTLFTYMLSLTPLIIEVSPRRGSTAGGTRLTVTG SGFSENTEDVQVTIANSKCDVQYSNKTHIVCMTSAHAPSGWAPVLVNIKNIGVAKLENADFLYA DVWSANSSWGGKLPPEEGSLAVITKGQIILLDQSTPILKMLLIQGGTLIFDEADIELQAENILI TDGGVLQIGTEAFPFQHQAVITLHGHLRSPELPVYGAKTLAVREGTLDLHGLPIPVVWTRLAHT ANAGEWTLTVQEAVTWKTGDSIVIASTGHRHSQGENEKRTIASVSADGMHITLTRPLNYTHLGI TTTLPDGTVFEARAEVGILTRNILIRGSENVEWNDKIPSCPDGFDTGEFATQTCLQGKFGEEMG SDQFGGCIMLHAPLPGADMVTGRIEYVEVFHAGQSFRLGRYPIHWHLLGDLQFKSYVRGCAIHQ AYNRAVTIHNTHHLLVERNIIYDIKGGAFFIEDGIEHGNILQYNLAVFVQQSTSLLNDDVTPAA FWVTNPNNTIRHNVAAGGTHFGFWYRMNDHPDGPSFNRNICQKRIPLGEFYNNTVHSQGWFGLW IFEEYFPMHTGSCTSTVPVPAVFNSLTVWNCQKGAEWVNGGALQFHNFVMVNNYEAGIETKRIL APYVGGWGESNGAVIKNAKIVGHLDELGMGSTFCTSKGLVLPFSQGLTVSSVHFMNFDRHACVA LGVTSITGVCNDRCGGWSAKFVDIQYFHAPNKAGFRWEHEAVLIDVDGSLTGHRGHTVIPHSPL LDPSHCTQEAAWSIGFPGSVCDASVSFHRLAFNKPSPVSLLEKDVVLSDSFGTSIVPFQKKRLT HMSGWMALIPNANHINWYFKGVEHLTNISYTSTFYGFKEEDYVIISHNFTQNPDMFNVVDMRNG SSNPLNWNSSKNGDWHLEANTSTLYYLVSGRSDLPQSQPISGTLDPDVKDVIINFQAYCCVLQD CFPVHPPSKKTIPRKRPATYNLWSNESFWQSSPENNYTVPRPGANVIIPEGTWIVADMDIPPME KLIIWGVLEMEDKSEVGAAGPAYRKVVLNATYISVQGGRLIGGWEDNPFKGELQIVLRGNHSTP EWALPDGPNQGAKVLGVFGELDLHGLPHSVYKTKLLETAEAGSKILSLVDAVDWQEGEDIVITT TSYDLHQTEIRRIAKVLHGRKVLILNDSLSYTHLAERQWIPETSQSYTLSADVGILSRNIKIVG EDYSVWSKDSFGARILVGSFTGNMMTFKGNARISNVEFYHSGQEGYRDSTDPRYAVTFLNLGQI QDHGLSYVRGCAFHHGFSPAIGVFGTNGVDIDDNIIYFTVGEGIRIWGDANRVRGNLVTLSVWP GTYQNRKDLSSTLWHAAIEINRGTNTVLQNNIVAGFGRVGYRIDGEPCSSQANPMENWFNNEAH GGLYGIYMNQDGLPGCSLIQGFTIWACWDYGIYFQTMESVHIYNVTLVNNGMAIFSMIYMPSSV SHKVSSKTVRIKNSLIVGSSPEFNCSDILTNDSPDVELTSAHRSSRPPSGGRSGICWPTFASAH NMAPRKPHAGIMSYNAISGLLDVSGSTFVGFKDVCSGETNVIFITNPLNEDLQHPIHVKNVQLV DTIEQSKVFIHRPDISKVNPSDCVDMVCDAKRKSFLKDLDGSFLGNSGSVIPQAEYEWDGNSQL GIGDYRIPKAMLTFLNGSRIPVTEKAPHKGILRDATCKYIPEWQSYQCLGMEYAMMVIESLDSD TETRRLSPVAIMSNGYVDLINGPQDHGWCAGYTCQRRLSLFHGIVALNKTYEVYFTGTSPQNLR LMLLNVEFNKVVLVGIFFSTLQRLDVYVNNSLVCPKNTVWNDQKKHCELERHLNTEQFLPNLGS TVPGENYFDRTYQMLYLLLKGTTPVEVHTATVIYVSFQLPAMTADEFFSSNNLVRNLALFLKIP SDKIRVSRIIGASLRRKRSTGRIMEFEIGAAPTRFLSNSTTGQMQLSELQEITGCLGQAVILGK ISTILGFNISSMSITSPIPQPTDSGWIKVTAQPVERSAFPVHYLALVSSLSVVAQPVATQPGQP FSQQPSVKAVDPEGNCVSVGITSLTLKAILKDSNNNQVGGLSGNTTIPFITCWANYTDLTPHRT GKNYKIEFVLDNSVRVESRPFSLSAQTVPGGSGSSSSSGHSKASSVGTPVQTLAIVIGCLVGRL LLLEVFMATVFILKTTIESN hide sequence

Ensembl Acc Id:

ENSRNOP00000053974 ⟸ ENSRNOT00000057146

Ensembl Acc Id:

ENSRNOP00000005958 ⟸ ENSRNOT00000005958

RefSeq Acc Id:	XP_038935089 ⟸ XM_039079161
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AHF3 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000092223 ⟸ ENSRNOT00000100813

Protein Domains

G8 PA14

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13695334

Promoter ID:

EPDNEW_R5844

Type:

initiation region

Name:

Pkhd1l1_1

Description:

PKHD1 like 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	7	83,372,987 - 83,373,047	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310406	AgrOrtholog
BioCyc Gene	G2FUF-33479	BioCyc
Ensembl Genes	ENSRNOG00000004398	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000005958	ENTREZGENE
	ENSRNOT00000005958.9	UniProtKB/TrEMBL
	ENSRNOT00000057146.7	UniProtKB/TrEMBL
Gene3D-CATH	2.160.20.10	UniProtKB/TrEMBL
	2.60.120.1560	UniProtKB/TrEMBL
	2.60.40.10	UniProtKB/TrEMBL
	2.60.40.420	UniProtKB/TrEMBL
InterPro	CEMIP_beta-hel_dom	UniProtKB/TrEMBL
	Cupredoxin	UniProtKB/TrEMBL
	Fibrocystin-related	UniProtKB/TrEMBL
	G8_domain	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_E-set	UniProtKB/TrEMBL
	IPT_TIG_rcpt	UniProtKB/TrEMBL
	PA14	UniProtKB/TrEMBL
	PA14/GLEYA	UniProtKB/TrEMBL
	PbH1	UniProtKB/TrEMBL
	Pectin_lyas_fold	UniProtKB/TrEMBL
	Pectin_lyase_fold/virulence	UniProtKB/TrEMBL
KEGG Report	rno:314917	UniProtKB/TrEMBL
NCBI Gene	314917	ENTREZGENE
PANTHER	FIBROCYSTIN-L	UniProtKB/TrEMBL
	POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1	UniProtKB/TrEMBL
Pfam	CEMIP_beta-hel	UniProtKB/TrEMBL
	PA14	UniProtKB/TrEMBL
	PF10162	UniProtKB/TrEMBL
	TIG	UniProtKB/TrEMBL
PhenoGen	Pkhd1l1	PhenoGen
PROSITE	PA14	UniProtKB/TrEMBL
	PS51484	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000004398	RatGTEx
SMART	IPT	UniProtKB/TrEMBL
	PA14	UniProtKB/TrEMBL
	PbH1	UniProtKB/TrEMBL
	SM01225	UniProtKB/TrEMBL
Superfamily-SCOP	Anthrax protective antigen	UniProtKB/TrEMBL
	Ig_E-set	UniProtKB/TrEMBL
	SSF49503	UniProtKB/TrEMBL
	SSF51126	UniProtKB/TrEMBL
UniProt	A0A8I6AHF3	ENTREZGENE
	D4A9R2	ENTREZGENE, UniProtKB/TrEMBL
	E9PSK6_RAT	UniProtKB/TrEMBL
	Q3KRE5_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-03-27	Pkhd1l1	PKHD1 like 1	Pkhd1l1	polycystic kidney and hepatic disease 1-like 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	Pkhd1l1	polycystic kidney and hepatic disease 1-like 1	Pkhd1l1_predicted	polycystic kidney and hepatic disease 1-like 1 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Pkhd1l1_predicted	polycystic kidney and hepatic disease 1-like 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM