Dnajc18 (DnaJ heat shock protein family (Hsp40) member C18) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Dnajc18 (DnaJ heat shock protein family (Hsp40) member C18) Rattus norvegicus
Analyze
Symbol: Dnajc18
Name: DnaJ heat shock protein family (Hsp40) member C18
RGD ID: 1310237
Description: Predicted to enable Hsp70 protein binding activity. Predicted to be involved in cellular response to misfolded protein and protein folding. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human DNAJC18 (DnaJ heat shock protein family (Hsp40) member C18); INTERACTS WITH 17alpha-ethynylestradiol; 2-methoxyethanol; acetamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: DnaJ (Hsp40) homolog, subfamily C, member 18; dnaJ homolog subfamily C member 18; LOC291677; RGD1310237; similar to RIKEN cDNA 2700075B01
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81827,543,438 - 27,577,535 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1827,543,438 - 27,577,535 (-)EnsemblGRCr8
mRatBN7.21827,269,350 - 27,303,453 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1827,269,355 - 27,298,344 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1827,396,762 - 27,430,860 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01828,158,868 - 28,192,803 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01827,493,750 - 27,527,676 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01828,466,892 - 28,501,013 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1828,466,311 - 28,495,937 (-)Ensemblrn6Rnor6.0
Rnor_5.01828,179,452 - 28,213,577 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41828,293,234 - 28,321,325 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1827,002,902 - 27,036,798 (-)NCBICelera
RGSC_v3.11828,319,881 - 28,347,973 (-)NCBI
Cytogenetic Map18p11NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Genomics

Comparative Map Data
Dnajc18
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81827,543,438 - 27,577,535 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1827,543,438 - 27,577,535 (-)EnsemblGRCr8
mRatBN7.21827,269,350 - 27,303,453 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1827,269,355 - 27,298,344 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1827,396,762 - 27,430,860 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01828,158,868 - 28,192,803 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01827,493,750 - 27,527,676 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01828,466,892 - 28,501,013 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1828,466,311 - 28,495,937 (-)Ensemblrn6Rnor6.0
Rnor_5.01828,179,452 - 28,213,577 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41828,293,234 - 28,321,325 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1827,002,902 - 27,036,798 (-)NCBICelera
RGSC_v3.11828,319,881 - 28,347,973 (-)NCBI
Cytogenetic Map18p11NCBI
DNAJC18
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385139,410,203 - 139,439,525 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5139,408,588 - 139,444,491 (-)Ensemblhg38GRCh38
GRCh375138,745,892 - 138,775,214 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365138,775,279 - 138,803,038 (-)NCBIBuild 36Build 36hg18NCBI36
Celera5134,865,984 - 134,895,485 (-)NCBICelera
Cytogenetic Map5q31.2NCBI
HuRef5133,935,625 - 133,964,955 (-)NCBIHuRef
CHM1_15138,178,512 - 138,207,821 (-)NCBICHM1_1
T2T-CHM13v2.05139,936,006 - 139,965,339 (-)NCBIT2T-CHM13v2.0
Dnajc18
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391835,804,156 - 35,841,467 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1835,804,156 - 35,841,467 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381835,671,103 - 35,708,418 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1835,671,103 - 35,708,414 (-)Ensemblmm10GRCm38
MGSCv371835,830,757 - 35,862,798 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361835,799,801 - 35,829,095 (-)NCBIMGSCv36mm8
Celera1836,127,205 - 36,159,228 (-)NCBICelera
Cytogenetic Map18B2NCBI
cM Map1819.21NCBI
Dnajc18
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554181,124,616 - 1,149,891 (+)Ensembl
ChiLan1.0NW_0049554181,119,699 - 1,149,891 (+)NCBIChiLan1.0ChiLan1.0
DNAJC18
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24134,677,043 - 134,711,375 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15132,818,084 - 132,850,927 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05134,781,226 - 134,814,813 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15140,903,760 - 140,938,025 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5140,903,767 - 140,937,345 (-)EnsemblpanPan2panpan1.1
DNAJC18
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1234,730,877 - 34,762,234 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl234,733,250 - 34,762,276 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha231,832,954 - 31,865,016 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0235,184,748 - 35,216,831 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl235,185,521 - 35,212,960 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1232,237,225 - 32,269,312 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0233,103,521 - 33,135,614 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0233,855,335 - 33,887,432 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Dnajc18
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213153,084,656 - 153,113,754 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365318,497,749 - 8,526,837 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365318,498,714 - 8,526,803 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAJC18
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2141,295,610 - 141,337,407 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.12141,297,914 - 141,337,438 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22147,196,055 - 147,212,170 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DNAJC18
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12342,085,336 - 42,119,801 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2342,083,303 - 42,114,728 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603435,773,570 - 35,804,681 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dnajc18
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474332,217,570 - 32,239,369 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474332,214,111 - 32,239,323 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Dnajc18
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1158,672,877 - 8,701,864 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Dnajc18
215 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:50
Count of miRNA genes:49
Interacting mature miRNAs:50
Transcripts:ENSRNOT00000027194
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182507112683910656Rat
2301409Cm70Cardiac mass QTL 700.001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)18706572852065728Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)182201556261600538Rat
1331735Rf44Renal function QTL 442.981urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)181564228031610627Rat
61382Bp46Blood pressure QTL 4618.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181221668431644508Rat
2301413Bp318Blood pressure QTL 3180.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182682218671822186Rat
12904716Am21Aortic mass QTL 210.005aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)18706572852065728Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182349405785487725Rat
12904714Cm131Cardiac mass QTL 1310.002heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)18706572852065728Rat
12904715Cm132Cardiac mass QTL 1320.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)18706572852065728Rat
6903345Bp349Blood pressure QTL 3493.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18391722648917226Rat
12904668Bw188Body weight QTL 1880.03body mass (VT:0001259)body weight (CMO:0000012)182682218671822186Rat
2313082Bss85Bone structure and strength QTL 850.80.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)181522610142690662Rat
12904669Cm125Cardiac mass QTL 1250.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)182682218671822186Rat
6903347Bp350Blood pressure QTL 3504.4arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18131610627Rat
12904670Cm126Cardiac mass QTL 1260.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)182682218671822186Rat
2312568Glom21Glomerulus QTL 2120.005kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)18546045542690191Rat
6903349Bp351Blood pressure QTL 3513.5arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18391722648917226Rat
631509Sald2Serum aldosterone level QTL 22.9blood aldosterone amount (VT:0005346)serum aldosterone level (CMO:0000487)182641582171415821Rat
6903351Bp352Blood pressure QTL 3523.3arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18391722648917226Rat
12904677Kidm72Kidney mass QTL 720.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)182682218671822186Rat
1331766Bp236Blood pressure QTL 2363.022arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18131610627Rat
12904673Cm127Cardiac mass QTL 1270.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)182682218671822186Rat
12904675Am19Aortic mass QTL 190.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)182682218671822186Rat
631264Scl22Serum cholesterol level QTL 226.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)181221668431644508Rat
1331775Bp235Blood pressure QTL 2353.201arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181564228031610627Rat
2325839Bp348Blood pressure QTL 3480.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18144930869Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)181955353285493247Rat
2293708Bss46Bone structure and strength QTL 468.80.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)181206648257066482Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181206648285493247Rat
2312598Bp340Blood pressure QTL 3400.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18381190230809809Rat
2300180Bmd67Bone mineral density QTL 674.80.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)18134566578Rat
2299160Iddm35Insulin dependent diabetes mellitus QTL 352.79blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)18448264849482648Rat
1331753Bp231Blood pressure QTL 2313.643arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18154490981Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181206648285493247Rat
11565454Kidm59Kidney mass QTL 590.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)18706572852065728Rat
1331754Bp230Blood pressure QTL 2304.61609arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181564228086134022Rat
2293661Bss50Bone structure and strength QTL 504.640.0003lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)18134566578Rat
61375Bp41Blood pressure QTL 412.4blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)18430735449307354Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 90 59 6 354 190 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000027194   ⟹   ENSRNOP00000027194
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1827,543,438 - 27,577,535 (-)Ensembl
mRatBN7.2 Ensembl1827,269,356 - 27,298,344 (-)Ensembl
Rnor_6.0 Ensembl1828,466,311 - 28,495,937 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000097174   ⟹   ENSRNOP00000079625
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1827,543,438 - 27,577,535 (-)Ensembl
mRatBN7.2 Ensembl1827,269,355 - 27,298,308 (-)Ensembl
RefSeq Acc Id: NM_001013887   ⟹   NP_001013909
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81827,543,438 - 27,577,535 (-)NCBI
mRatBN7.21827,269,350 - 27,303,453 (-)NCBI
Rnor_6.01828,466,902 - 28,500,953 (-)NCBI
Rnor_5.01828,179,452 - 28,213,577 (-)NCBI
RGSC_v3.41828,293,234 - 28,321,325 (-)RGD
Celera1827,002,902 - 27,036,798 (-)RGD
Sequence:
RefSeq Acc Id: NM_001398603   ⟹   NP_001385532
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81827,543,438 - 27,577,535 (-)NCBI
mRatBN7.21827,269,350 - 27,303,453 (-)NCBI
RefSeq Acc Id: NP_001013909   ⟸   NM_001013887
- Peptide Label: isoform 1
- UniProtKB: Q6AXW3 (UniProtKB/TrEMBL),   A0A8I5ZNW9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000027194   ⟸   ENSRNOT00000027194
Ensembl Acc Id: ENSRNOP00000079625   ⟸   ENSRNOT00000097174
RefSeq Acc Id: NP_001385532   ⟸   NM_001398603
- Peptide Label: isoform 2
- UniProtKB: Q0H8V1 (UniProtKB/TrEMBL),   F7F826 (UniProtKB/TrEMBL),   A0A8I5ZNW9 (UniProtKB/TrEMBL)
Protein Domains
J

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q0H8V1-F1-model_v2 AlphaFold Q0H8V1 1-357 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700712
Promoter ID:EPDNEW_R11236
Type:initiation region
Name:Dnajc18_1
Description:DnaJ heat shock protein family member C18
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01828,495,848 - 28,495,908EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1310237 AgrOrtholog
BioCyc Gene G2FUF-7897 BioCyc
Ensembl Genes ENSRNOG00000019995 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000027194 ENTREZGENE
  ENSRNOT00000027194.8 UniProtKB/TrEMBL
  ENSRNOT00000097174 ENTREZGENE
  ENSRNOT00000097174.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.110 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7134364 IMAGE-MGC_LOAD
InterPro DnaJ_dom_sf UniProtKB/TrEMBL
  DnaJ_N UniProtKB/TrEMBL
  DnaJ_subfamily_B/C UniProtKB/TrEMBL
  DUF1977_DnaJ-like UniProtKB/TrEMBL
  Heat_shock_DnaJ_CS UniProtKB/TrEMBL
KEGG Report rno:291677 UniProtKB/TrEMBL
MGC_CLONE MGC:94420 IMAGE-MGC_LOAD
NCBI Gene 291677 ENTREZGENE
PANTHER AT29763P-RELATED UniProtKB/TrEMBL
  DNAJ HOMOLOG SUBFAMILY C MEMBER 18 UniProtKB/TrEMBL
Pfam DnaJ UniProtKB/TrEMBL
  DUF1977 UniProtKB/TrEMBL
PhenoGen Dnajc18 PhenoGen
PRINTS DNAJPROTEIN UniProtKB/TrEMBL
PROSITE DNAJ_1 UniProtKB/TrEMBL
  DNAJ_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000019995 RatGTEx
SMART DnaJ UniProtKB/TrEMBL
Superfamily-SCOP DnaJ_N UniProtKB/TrEMBL
UniProt A0A8I5ZNW9 ENTREZGENE
  F7F826 ENTREZGENE, UniProtKB/TrEMBL
  Q0H8V1 ENTREZGENE, UniProtKB/TrEMBL
  Q6AXW3 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A8I5ZNW9 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-25 Dnajc18  DnaJ heat shock protein family (Hsp40) member C18  Dnajc18  DnaJ (Hsp40) homolog, subfamily C, member 18  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Dnajc18  DnaJ (Hsp40) homolog, subfamily C, member 18  RGD1310237  similar to RIKEN cDNA 2700075B01  Symbol and Name updated 1299863 APPROVED
2005-12-06 RGD1310237  similar to RIKEN cDNA 2700075B01  RGD1310237_predicted  similar to RIKEN cDNA 2700075B01 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1310237_predicted  similar to RIKEN cDNA 2700075B01 (predicted)  LOC291677_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC291677_predicted  similar to RIKEN cDNA 2700075B01 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL