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Gene: Nsun7 (NOP2/Sun RNA methyltransferase family member 7) Rattus norvegicus

Analyze

Symbol:

Nsun7

Name:

NOP2/Sun RNA methyltransferase family member 7

RGD ID:

1310137

Description:

Predicted to enable RNA binding activity and methyltransferase activity. Predicted to be involved in methylation. Predicted to act upstream of or within flagellated sperm motility and sperm mitochondrion organization. Orthologous to human NSUN7 (NOP2/Sun RNA methyltransferase family member 7); INTERACTS WITH 6-propyl-2-thiouracil; acrylamide; amitrole.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC305339; NOL1/NOP2/Sun domain family, member 7; NOP2/Sun domain family, member 7; putative methyltransferase NSUN7; RGD1310137; similar to NOL1R protein; Williams-Beuren syndrome critical region protein 20

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	42,233,062 - 42,289,013 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	14	42,233,062 - 42,288,958 (-)	Ensembl				GRCr8
mRatBN7.2	14	41,878,562 - 41,935,238 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	41,879,293 - 41,934,949 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	14	42,224,836 - 42,287,402 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	43,524,923 - 43,587,491 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	42,005,706 - 42,068,284 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	43,525,530 - 43,584,621 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	43,527,579 - 43,584,343 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	14	43,315,334 - 43,374,692 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	14	44,556,251 - 44,582,930 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	14	41,060,653 - 41,087,334 (-)	NCBI		Celera
RGSC_v3.1	14	44,558,641 - 44,585,321 (-)	NCBI
Cytogenetic Map	14	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

male infertility (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

17beta-estradiol (ISO)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

arsenite(3-) (ISO)

atrazine (EXP)

belinostat (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

carbon nanotube (ISO)

choline (ISO)

cisplatin (ISO)

Cuprizon (EXP)

DDE (ISO)

diquat (ISO)

dorsomorphin (ISO)

entinostat (ISO)

folic acid (ISO)

L-methionine (ISO)

mono(2-ethylhexyl) phthalate (ISO)

N-ethyl-N-nitrosourea (ISO)

nickel atom (ISO)

ozone (ISO)

paraquat (EXP)

rotenone (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

titanium dioxide (ISO)

triadimefon (EXP)

trichostatin A (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

flagellated sperm motility (ISO)

methylation (IEA)

sperm mitochondrion organization (ISO)

Molecular Function

methyltransferase activity (IEA)

RNA binding (IEA)

transferase activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:17442852

Genomics

Comparative Map Data

Nsun7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	42,233,062 - 42,289,013 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	14	42,233,062 - 42,288,958 (-)	Ensembl				GRCr8
mRatBN7.2	14	41,878,562 - 41,935,238 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	41,879,293 - 41,934,949 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	14	42,224,836 - 42,287,402 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	43,524,923 - 43,587,491 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	42,005,706 - 42,068,284 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	43,525,530 - 43,584,621 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	43,527,579 - 43,584,343 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	14	43,315,334 - 43,374,692 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	14	44,556,251 - 44,582,930 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	14	41,060,653 - 41,087,334 (-)	NCBI		Celera
RGSC_v3.1	14	44,558,641 - 44,585,321 (-)	NCBI
Cytogenetic Map	14	p11	NCBI

NSUN7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	40,749,955 - 40,811,184 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	40,749,776 - 40,811,184 (+)	Ensembl			hg38	GRCh38
GRCh37	4	40,751,972 - 40,813,201 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	40,446,699 - 40,506,759 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	4	41,194,556 - 41,255,316 (+)	NCBI		Celera
Cytogenetic Map	4	p14	NCBI
HuRef	4	40,073,760 - 40,133,961 (+)	NCBI		HuRef
CHM1_1	4	40,751,551 - 40,811,726 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	4	40,723,823 - 40,785,135 (+)	NCBI		T2T-CHM13v2.0

Nsun7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	66,417,181 - 66,457,544 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	66,417,240 - 66,455,369 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	5	66,259,838 - 66,299,927 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	66,259,897 - 66,298,026 (+)	Ensembl			mm10	GRCm38
MGSCv37	5	66,651,364 - 66,689,255 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	5	66,539,260 - 66,577,151 (+)	NCBI		MGSCv36	mm8
Celera	5	63,558,668 - 63,596,664 (+)	NCBI		Celera
Cytogenetic Map	5	C3.1	NCBI
cM Map	5	34.34	NCBI

Nsun7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955443	6,789,224 - 6,830,813 (-)	Ensembl
ChiLan1.0	NW_004955443	6,788,155 - 6,830,659 (-)	NCBI	ChiLan1.0	ChiLan1.0

NSUN7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	40,931,709 - 40,991,735 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	41,123,658 - 41,183,689 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	35,071,093 - 35,131,207 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	40,922,714 - 40,982,315 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	40,922,714 - 40,982,315 (+)	Ensembl			panPan2	panpan1.1

NSUN7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	71,832,051 - 71,891,020 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	71,833,198 - 71,891,453 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	74,382,001 - 74,440,288 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	72,592,087 - 72,651,343 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	72,592,234 - 72,651,343 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	71,868,055 - 71,922,508 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	72,024,017 - 72,078,449 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	72,408,100 - 72,462,582 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Nsun7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405285	38,136,705 - 38,171,312 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936482	8,126,720 - 8,162,183 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936482	8,126,812 - 8,161,899 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NSUN7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	31,810,320 - 31,925,472 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	8	31,810,012 - 31,920,145 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	33,428,452 - 33,536,833 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NSUN7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	27	9,536,614 - 9,589,622 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	27	9,537,740 - 9,589,573 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666047	55,870,775 - 55,924,943 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nsun7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624761	26,268,868 - 26,310,652 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624761	26,267,988 - 26,310,048 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Nsun7
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	11	23,363,076 - 23,420,160 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Nsun7
503 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	103
Count of miRNA genes:	90
Interacting mature miRNAs:	93
Transcripts:	ENSRNOT00000039835
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2313089	Bss81	Bone structure and strength QTL 81	3.4	0.0001	body length (VT:0001256)	body length, nose to rump (CMO:0000079)	14	38023710	83023710	Rat
70214	Niddm28	Non-insulin dependent diabetes mellitus QTL 28	4.06		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	14	39009444	84009444	Rat
1300154	Bp189	Blood pressure QTL 189	3.04		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	14	31238080	72970315	Rat
70187	Pancm5	Pancreatic morphology QTL 5	16.7		pancreas mass (VT:0010144)	pancreas weight to body weight ratio (CMO:0000630)	14	30674469	85041098	Rat
631523	Pia13	Pristane induced arthritis QTL 13	3.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	14	33424686	102238540	Rat
1358296	Ael3	Aortic elastin QTL 3	3.7	0.00051	aorta elastin amount (VT:0003905)	aortic elastin	14	8621398	53621398	Rat
61420	Pia6	Pristane induced arthritis QTL 6	4.9		joint integrity trait (VT:0010548)	arthritic paw count (CMO:0001460)	14	18915454	42433608	Rat
2313100	Bss82	Bone structure and strength QTL 82	3	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	14	38023710	83023710	Rat
7387267	Uae42	Urinary albumin excretion QTL 42		0.61	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	14	22521517	67521517	Rat
631839	Niddm37	Non-insulin dependent diabetes mellitus QTL 37	3.37		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	14	11334716	100078267	Rat
2313397	Coatc1	Coat color QTL1			coat/hair pigmentation trait (VT:0010463)	coat/hair color measurement (CMO:0001808)	14	18895192	63895192	Rat
631262	Tcas4	Tongue tumor susceptibility QTL 4	7.29		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	14	17906726	54251504	Rat
2313048	Bss84	Bone structure and strength QTL 84	3.1	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	14	38023710	83023710	Rat
2302045	Pia39	Pristane induced arthritis QTL 39	4.9	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G2a level (CMO:0002116)	14	8621398	53621398	Rat
738037	Hcas6	Hepatocarcinoma susceptibility QTL 6	2.93		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)	14	39411170	87582095	Rat
2313084	Bss83	Bone structure and strength QTL 83	2.9	0.0001	tibia size trait (VT:0100001)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	14	38023710	83023710	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	11	53	165	55	54	23	81	23	6	289	166	11	144	76	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001017452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001400916	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001400917	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001400918	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039091913	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039091914	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039091915	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039091916	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063273123	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063273124	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063273125	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC083653	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473981	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000039835 ⟹ ENSRNOP00000037949

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	14	42,233,062 - 42,288,958 (-)	Ensembl
mRatBN7.2 Ensembl	14	41,879,293 - 41,934,949 (-)	Ensembl
Rnor_6.0 Ensembl	14	43,527,579 - 43,584,343 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000112515 ⟹ ENSRNOP00000078036

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	14	42,233,998 - 42,288,958 (-)	Ensembl
mRatBN7.2 Ensembl	14	41,880,206 - 41,934,949 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000113567 ⟹ ENSRNOP00000080300

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	14	42,233,998 - 42,288,958 (-)	Ensembl
mRatBN7.2 Ensembl	14	41,880,206 - 41,934,949 (-)	Ensembl

RefSeq Acc Id:

NM_001017452 ⟹ NP_001017452

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	42,262,044 - 42,289,012 (-)	NCBI
mRatBN7.2	14	41,908,269 - 41,935,238 (-)	NCBI
Rnor_6.0	14	43,556,692 - 43,584,320 (-)	NCBI
Rnor_5.0	14	43,315,334 - 43,374,692 (-)	NCBI
RGSC_v3.4	14	44,556,251 - 44,582,930 (-)	RGD
Celera	14	41,060,653 - 41,087,334 (-)	RGD

Sequence:

show sequence

CGCCCGAACCCCGCGGGTGGTGTGGCTGTACTTGAATTAAACGGCCTCCGCGGGCGGTCGCCTC
CCGGGGCTCCCGAGGGCCTGGTTCTGCCTCCAGCGCCCCAAGTACAGAGGTTGCCGCGTCTTCA
GCCCCAGAGCCCCGGGGAAACATCCCAACCTTAGAGAAGGGCGGATTCGCGGAGAAGAGACCAT
GCTTAAGACTACAAGGATAGCAATCTCCCTGGACCACCTGAATTGAACCTGAAGCTTGAGTTAT
TGACATCAGGGGCAGTTGACATCAGAGGCAAACATGTTGGATCCGAACAGTGCAATGGACTTTT
TTGACCAAGAAAATATGGAGGAGCTCTCCCAACTCGCTTCCCTAGAGATGTCAGGGGATTTAGT
TTCCAAGAGAAAACCTTCAGCTGCGCTAGAAAAATCTAGCTATCCAGACTCCGTGTACGTTACG
GCGGCAAACATTTTTCAGGGTATTCGAATCCAAAGGCCAGCAGACAAAGTCATCATAAATTACG
GGGATGAACTCTTGCCGTCCTCCTGGACCCAGGCCGAGGAAGATTCTTTTCAGCGTTTGTCCTA
TGAGTTGGCTTTCAGTACCCTGAAGTATCAAGATATTTTGGAAAGTATATTAATAGATACCGAT
ATCTTCTCAAGTACCACAATCCCAGATCAGTTGAACAGCCTTATCATTGTGATGCTGTATGATT
TCCAAGATAGAAAATTTCAGCCCCGTGTCCTTCCCAATGACGCAGTGACCATACCAGAAGTTCA
AGAAGTAGAGAACCTTCTTAACAGCTTTAAGACAAAGTTGGCTGCGGCATTGGCGAGATGTCGG
ATCAAGCATGATGCCCTTTCGATTTACCATATTCTGCCAGAGACAGTTAGGAAACAGGAACAGC
GGGCCTCGACTTTGCCTCTGTATGCTTGGATAAATATTGGTAAAGTAAGCCTTGAAGAAGTTTA
CGATGATCTGAGGAAAAAAGGTTTTGATAAGGTCAAGTCGATAGCGTATCTCAATGACAAGGTC
TTTGCCGTTGATCAGCATTGCTTCAATGTCTTAATTTTTCCATCTCATTTCAAAAGAGAACTTT
TAAACATAGATCTTATAAAAGACTATAAACTCATTTTCCAGGACAAATCTCGAAGCCTTGCTGT
CCACTCTGTCAAGGCTTTAATAAACATGGACGACGATATCCTAATGGTCAACACAGGCTCATGG
TACACAGTTGCCCATATGTCCATCTTAACAAGTGGCAACACCTCGAAAATATTTGTATGTGGAA
TAGAATCGGAAGAGAAGGATTCTGATGCGAAGAAACTTTTCACAAAAATGGGATGTGAAAGTAT
GTGCCGACGTCTATTTGACCACTAGCTCTATAAGAACTTAGAAATATTAAAAATGTTTGGATTT
CCAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001400916 ⟹ NP_001387845

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	42,233,998 - 42,288,958 (-)	NCBI
mRatBN7.2	14	41,880,223 - 41,935,184 (-)	NCBI

RefSeq Acc Id:

NM_001400917 ⟹ NP_001387846

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	42,233,062 - 42,288,255 (-)	NCBI
mRatBN7.2	14	41,879,287 - 41,934,481 (-)	NCBI

RefSeq Acc Id:

NM_001400918 ⟹ NP_001387847

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	42,233,062 - 42,288,958 (-)	NCBI
mRatBN7.2	14	41,879,287 - 41,935,184 (-)	NCBI

RefSeq Acc Id:

XM_006250947 ⟹ XP_006251009

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	42,233,062 - 42,289,013 (-)	NCBI
mRatBN7.2	14	41,878,562 - 41,935,238 (-)	NCBI
Rnor_6.0	14	43,525,530 - 43,584,621 (-)	NCBI
Rnor_5.0	14	43,315,334 - 43,374,692 (-)	NCBI

Sequence:

show sequence

CGGGCACCCTGCCGCACCCGCTCACGCCTCTAGAAGACTTAGAGGAAATTTCGGTAGCCAGGGT
CGAGTACGGACCCAGCTCCTGGCTTCCTGCTGCTGTACCCGCTAGGTTGGCTGCAAGAGCCCGG
GGTGGTCGCGAGAAGCGTCCCCTCAGGGACCCAGAGCCTTCTTTGAGGGATCCCGAGAGCCGAG
GGCCGGTCCTGAGCAGTGTCCCCCCGGAGCCCGAAGACGCGCTTGAGGAGGCAGCGTTTCCCTC
AGGGACCCGAACGTAGCGGGCGCGGGCGCCGAGCGCTTTCCCCCACGCCCGAACCCCGCGGGTG
GTGTGGCTGTACTTGAATTAAACGGCCTCCGCGGGCGGTCGCCTCCCGGGGCTCCCGAGGGCCT
GGTTCTGCCTCCAGCGCCCCAAGTACAGAGGTTGCCGCGTCTTCAGCCCCAGAGCCCCGGGGAA
ACATCCCAACCTTAGAGAAGGGCGGATTCGCGGAGAAGGTGAGACCATGCTTAAGACTACAAGG
ATAGCAATCTCCCTGGACCACCTGAATTGAACCTGAAGCTTGAGTTATTGACATCAGGGGCAGT
TGACATCAGAGGCAAACATGTTGGATCCGAACAGTGCAATGGACTTTTTTGACCAAGAAAATAT
GGAGGAGCTCTCCCAACTCGCTTCCCTAGAGATGTCAGGGGATTTAGTTTCCAAGAGAAAACCT
TCAGCTGCGCTAGAAAAATCTAGCTATCCAGACTCCGTGTACGTTACGGCGGCAAACATTTTTC
AGGGTATTCGAATCCAAAGGCCAGCAGACAAAGTCATCATAAATTACGGGGATGAACTCTTGCC
GTCCTCCTGGACCCAGGCCGAGGAAGATTCTTTTCAGCGTTTGTCCTATGAGTTGGCTTTCAGT
ACCCTGAAGTATCAAGATATTTTGGAAAGTATATTAATAGATACCGATATCTTCTCAAGTACCA
CAATCCCAGATCAGTTGAACAGCCTTATCATTGTGATGCTGTATGATTTCCAAGATAGAAAATT
TCAGCCCCGTGTCCTTCCCAATGACGCAGTGACCATACCAGAAGTTCAAGAAGTAGAGAACCTT
CTTAACAGCTTTAAGACAAAGTTGGCTGCGGCATTGGCGAGATGTCGGATCAAGCATGATGCCC
TTTCGATTTACCATATTCTGCCAGAGACAGTTAGGAAACAGGAACAGCGGGCCTCGACTTTGCC
TCTGTATGCTTGGATAAATATTGGTAAAGTAAGCCTTGAAGAAGTTTACGATGATCTGAGGAAA
AAAGGTTTTGATAAGGTCAAGTCGATAGCGTATCTCAATGACAAGGTCTTTGCCGTTGATCAGC
ATTGCTTCAATGTCTTAATTTTTCCATCTCATTTCAAAAGAGAACTTTTAAACATAGATCTTAT
AAAAGACTATAAACTCATTTTCCAGGACAAATCTCGAAGCCTTGCTGTCCACTCTGTCAAGGCT
TTAATAAACATGGACGACGATATCCTAATGGTCAACACAGGCTCATGGTACACAGTTGCCCATA
TGTCCATCTTAACAAGTGGCAACACCTCGAAAATATTTGTATGTGGAATAGAATCGGAAGAGAA
GGATTCTGATGCGAAGAAACTTTTCACAAAAATGGGATGTGAAAATATTGAAATACTTCATGAA
ACATTTCTTAGCATTGAACCCAAAGATCAGCGGTTACAGAATGTTAAGGTCATTCTGTTGCTAC
CTCGCTGTTCAAGCCTAGGTGTTAGTAATCCAGTGGAATTTATTTTAAATGAACACGAAGATAC
AAGTTTACTTCAAGATCTTTCTCAGGGTGGTCTACCAAAAGATAAACTTCAGATTTTTGCTCAG
CAACAATTTGAACAGCTAACACATGCAATGAAATTCGCTAAAGCTCAAGCGATTGTTTACTGTA
CATGTTCTGTTTCTGAAGAGGAAAATGAAGAAGTTGTTAAGAAAGCACTGGAATTTCAAAGCCC
AGCACTTAAACTACAACCTTACAGACTCAGTCCTCCCGTGCTCCCGCTGTGCTCCTTAAAAGAG
ATAGAACTGTCTATGGATAGGTTTTTCAGATTGGAGCCATCTGATATTACCAATGGCTGTTTTC
TTTCTATCTTAACAAGAGAGCGGGACCCATCCGAGACAGTGTCAGTGAAAGATGTTCTGGCCCG
GGCGGCGGCCAAAGGTCTACTGGATGGGGTTGAGGTTGGGAAGACACTCAAACGGGACAAGAAA
AGGAAAAAAGCAAAAGCCCCACTGCCCAAAGCCCCTCCCCAGGCGGACCTGGCTCACGACCATT
CGTCAGTGACTGGCGCCGATAACAGCATCCAAATGAAAATCACTGAGTTCCTGCATCGAGAAAG
CAAAGCCAGTGCAGTGAAAACGCCTCTCCCTGCAAAACCCGTGCCTCAAGTGGCTGCCTCCTCC
CAGATCAGAAAGCCCAGCAAGCCTTTATCGACCCCACTGGTGAGGACCACCAGGCCGTCAGAAA
AGGCGGGAAGCTTTGGGAGACCTCGGCCAGAAGGCAAAGGGATTCCTCTGAAACCGGTTGAAAT
CATTCTGCCTCCAGTGACGTTCCCATTCTCGAGCCCCCAGGGACCCAGGTTTCAGATGCCAGGC
ACCCATTTTTATTACCGCTTCATTGGATCAAAGGTTGGTGTGCCCAGCCATCTTACATCAATGT
CCAGAAGAAAGGAGAAGGCTAAGGAGAGCGTACCTTCCTCCTTCGTCAGGCATCCTAGACCATG
GCTCTGACTGTGTGGCCCTCGTGACAGGGTGGCTGGGCTTTGTCCACGTTTAGACACTGTTACA
TAAGATACTGGTGCTTTTGGTCACTTAGTACCCTCCAATGCAATAGAACATTTGGAGAGAGAAT
GAGGACAGATGAGGGTAACACTGGAGGGGCTGAGTGAGCAAAGCTAAGGCTTCCTCAGCTCAGC
GCTAATAAGCTCTTTCAGGAAGTCCAGTTGCAGACCAGATCAGCTGTTAGGCCTTGTCTCACTC
TGGGGAGGTTTGAAGTGTGGGCGGAGCATGGCTGTCTTACCTGAAGGGAACCCAGGATCCCTGC
CAGTAGGCTGACTTGCAGACTTCACTGAGGGGCTTGGTAGAGTCCTGAGATAAATGCTGTTCTT
TCCAGCCTGCTCCAGCTCTAGCCAGGAAGCCGAGACCATGCCTTAGCCGGGCAGTTGCTGTAGC
TGAAACCTCCTGAATCCCAGTTGAGGCCTTTTCTGCAAGCATCCCCCTGCTCCCGAGACAGGGC
ATGCCAGGAGGCTCTCTAGTAGACTGACCTTTGAGTGGAGTAGGAAGCACAGGAAACCCCAAGT
GCCAGATGTGCACAGTCCAGATGTTCATTCAGAAGAAAAGAAAGGTTTCTGGAGACGCTCCATA
ATCCCGAGCAGACTGAGCATGACAATCCCTCCCTTCTGTTTATGCCAAATTTTGTTGGAGAAGG
GACAGGGAGCACGTTCCCACCTAAGGATTCTGAGCTGTAGAATAGAAGTGACATATCATTTAAG
GAACTCAGGTTTCTGACTCTGTGCTGAGATCAGGTGGCACAGCCGAATCCCACACAGGTCATTC
CAGTGGCACACAGGGATCTGACCTTGGTGACTCATTTCTGGTACATTATTAGAATATACTGTAG
CACTGTGCTAATTACATCAAACGTCAACTACTCTTAGCGATACTCACCATTGCCTAGTAATACT
GACATGATTATCATTTCTGGGTCCGATTTTTTTTCATCATGGCAACAGAAATTGTTTGACATTA
AATAAAGTTATGATTACAATTCTTTTTTTTTTTTAAATCCAGACACATTTAGAGTTTGAATGTA
AAGCTCTTATCCAACTGCATAGATTTCTGAGTTCTAAACGCCCCATTCAGGTAGCAGGACTGCA
GTAGACCGGAGTCGGCCTCAGCTCCGGGGGGCCTTTTTGTCTCACTTGAGGTGGGAAGGACAGA
GGCTTGATGGGTTTGGTTTTCATAGTAGTTTTATTTTAGCTAACGATTTATATTTTCATTAAAA
TCTGAGTGAAGAAAATGAGTTTTGTACTTCAAGAGGTTTATGTTTATATTCTGGGGCGTTTTTG
CTAGTTGATTCTTGAAAAGCACAGGACATAGGAGGCAGACACAAGGGTTCCCAGTTCGTCTAGC
CAAGAGCTGCACAGTAGGATCCTGACTGGGCCCCTGCTCAGCGTGTTCCGGGTACTACTTCCCA
TCCCCAGCTTTCTAAACCACAAGCCCGCACTGCTCCTTACCAAGACACGAACCTCGAATCTCTT
TAAAGGATGTGTCTTGGGGTGCAGCCTAACCTACTACTGTTCAGAGAGGAGCTGCCATTTCATC
CCATGGGAGCTCAGGCCAAAAACCTTCACTCTCATTCTACTTTCTGGGCTAACTCTTTGCTCCG
AAGAGGTTCAGGGTATTTTCTAATCTCTAGCAGCACATGGTTCCTGTCACCACTTGGGTATCTC
CTACTATGTATGTTGCACTAAATCAGTCTTCTCTTTGCACATTCATGGAGACTCTGCTCTTCTT
TAGGACTCTTCTAGGGAGGACAGGATCAATAATTTCCTGATAAAGTAAGAAGAAAAACAGGATA
AAAGCAACCTAAGAGAACTCTAGTGAAGACCGCTGACCACACTGTTTTAACTGGCATTTCAACT
TCTTGATCTTCTTAAAGTGTTGGCAAAATAAAAGAAATCATCAAATGATAGCATTCAAATGCTG
CAGTAACTACTCATAGTTTTATTTACTTTGTGGTGCTGGGGGTTGAACCCAGAGTCTTGCCCAA
ATAAATTCGTGTTTTTTTACCTGAAACTATTTACCAGTATAAACCCCAAAAGCAGGATGAAATG
TTGTCCATTGAGAGTTGTCTTTAATAGCGTAAGAGAAGGTGGGGGGTGGGGGGCACACATTATA
ATCCCAGGAGGCTGGGGCAGGAGGATTGCCATCAGTTCAAGGCCAATCTGGGTTATATTATGAG
ACCCATCTCAAAGACCAGACAACACAACACAGCAAATGAACAAAACTTGGGTACACATTTTTAA
TTATTTGTCCCCTGAATGTCAGAGTTAAAACAGACCCAATTGACCGTCTAGTGATTGACTTTCA
TTTTGGATTTAAGGGCTCCCATCTCTGCTCCTCAGTCTTCTAAGAATGAAAGGCAGACTTTGTG
TGTGTGCATGCATGTGTGTGTGTTGAAATACCTTAACCCTAAAAGTTGCTTAGCAAAAAATTCC
AGCTGCCGATAAGACGGGTTTCTGTGTTCAGAATGCCACCTCACTTTACTGACATAAAGTATAA
AAATAACTACATCCTAATTTTTAACAAATGGGAGACCATAAACTCTAATGAAAGCAGAACCTTA
CATTACTAAAGTGATTTTTAAAAAAAAAGTTTAATTTGAAGTAAGAATACAAAAAATAAAATTA
CCGAAGAGACACTAAATTTGTATGTGTTTCTTATATATGTGGCCTGGCTATCAGATCAACGAGA
ATGCTTTTATGCAGCTACATTTATTCCCACGACATTTTACATGTAAACGTGTAAACGTGGTCCA
CAGCAAACGGCAACGCAAAGAAATGAGATGTCCTCTCAGGAGGAAGCGGCCGATGTGGCCGCCT
GGAGATGTCTTCACAGCCTTGAAGTGCCAACCTCTCCTCCTGTCCTCTCCAGGGGCTAAACTCC
GATCCCTGCACAGGTGGTGTAAGAGCTATACCACTGGGCCATACCACCAGTATGCCGAAACAAG
CTCAATTACTCTCTTACTGGCTATAAACACGTCAGATATTAGGTTAAACCGGGCCGACTAGAGA
GCTTTCAGTTTCATTAAATTGTGCTAATGTCAGGGAGACATGTGGCTTCTGAAGTCTTGTGTTG
AAATGCTCACAAATTGAATATACCACACATTAAGGGGAGTTTGGGGCTACAAGTTAAGAGGTCC
AGTTTGAATAGTTTGTTATGTGTCCTTCTTAAACCCCTAATGTGGATTAAAACAATAAAAGTAG
CACTGCCAACAGTTATCACCAAGAATTTGCTTTAATGGAAATGGGTCTAATGTCCCTTCATGCA
GTAGGACAGACAGACAGACAAAACAGTGGCTCTAATTGGCTAGGGGTGGCCTTAAATCCAGGTG
GAAACAAAGGCGTGTGGCTCTGTGTGTGTATTTTGGATGAAATCACGCGTGTTGAGAAGGGTAT
AAAAATGATGCCCCACAGTGCCTTTGTCTACAAAGTAAAGTTCTCCGCCAGACGGCATGTCGGC
TGCCCCCTCAACGCTTCCAAGGAGCATGCGGATAAGGTGGTGAGGGCACATCTGTCTAGCTGCT
TGTAAAAAATAAAAAGAACTTTAAGGGTTAACTTCTTTCCTACATATTCCAACAGAGATGTGAC
TGCCAACTGTTACAGAACCATGTGACTGCCAATCGTTACAGAACCACTTTCTAGATGACGTAGA
GTTCACTGGGTTACTTAAGTGAGACCTGGATACACAGACATCATACCCAGCAAAGATAGTACAG
TAACACAGGAATGCAGTATATTTCAGTAAAAACAGAATAAATAAAATAAAAATATTTCAAGCTG
TATTTAACAGGTTAATTTAAAAAAAGAAAAAGATAAGACACACAAGGCATCGTGAACATGGCCG
CCTGTTTACCGAATCACAGAGAAAGAATGCATAGATAACCGAAGTATCACAAAGACCTCAGGTA
AAACATCGGCCTCCTCTCACAGACGGATACAAACACACTTCCATACATACTTTTTTGGCCATGG
CAGAAAGGATCTGAACATATTGTTTAACATAATTTTACAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039091913 ⟹ XP_038947841

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	42,233,998 - 42,289,013 (-)	NCBI
mRatBN7.2	14	41,881,711 - 41,935,238 (-)	NCBI

RefSeq Acc Id:

XM_039091914 ⟹ XP_038947842

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	42,250,695 - 42,289,013 (-)	NCBI
mRatBN7.2	14	41,898,397 - 41,935,238 (-)	NCBI

RefSeq Acc Id:

XM_039091915 ⟹ XP_038947843

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	42,250,695 - 42,289,013 (-)	NCBI
mRatBN7.2	14	41,896,668 - 41,935,237 (-)	NCBI

RefSeq Acc Id:

XM_039091916 ⟹ XP_038947844

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	42,250,695 - 42,289,013 (-)	NCBI
mRatBN7.2	14	41,898,405 - 41,935,238 (-)	NCBI

RefSeq Acc Id:

XM_063273123 ⟹ XP_063129193

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	42,233,062 - 42,289,013 (-)	NCBI

RefSeq Acc Id:

XM_063273124 ⟹ XP_063129194

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	42,233,062 - 42,287,918 (-)	NCBI

RefSeq Acc Id:

XM_063273125 ⟹ XP_063129195

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	42,233,062 - 42,287,975 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001017452	(Get FASTA)	NCBI Sequence Viewer
	NP_001387845	(Get FASTA)	NCBI Sequence Viewer
	NP_001387846	(Get FASTA)	NCBI Sequence Viewer
	NP_001387847	(Get FASTA)	NCBI Sequence Viewer
	XP_006251009	(Get FASTA)	NCBI Sequence Viewer
	XP_038947841	(Get FASTA)	NCBI Sequence Viewer
	XP_038947842	(Get FASTA)	NCBI Sequence Viewer
	XP_038947843	(Get FASTA)	NCBI Sequence Viewer
	XP_038947844	(Get FASTA)	NCBI Sequence Viewer
	XP_063129193	(Get FASTA)	NCBI Sequence Viewer
	XP_063129194	(Get FASTA)	NCBI Sequence Viewer
	XP_063129195	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH83653	(Get FASTA)	NCBI Sequence Viewer
	EDL90043	(Get FASTA)	NCBI Sequence Viewer
	EDL90044	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000037949
	ENSRNOP00000037949.5
	ENSRNOP00000078036.1
	ENSRNOP00000080300
	ENSRNOP00000080300.1

RefSeq Acc Id:	NP_001017452 ⟸ NM_001017452
- Peptide Label:	isoform 4
- UniProtKB:	Q5XIM6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLDPNSAMDFFDQENMEELSQLASLEMSGDLVSKRKPSAALEKSSYPDSVYVTAANIFQGIRIQ RPADKVIINYGDELLPSSWTQAEEDSFQRLSYELAFSTLKYQDILESILIDTDIFSSTTIPDQL NSLIIVMLYDFQDRKFQPRVLPNDAVTIPEVQEVENLLNSFKTKLAAALARCRIKHDALSIYHI LPETVRKQEQRASTLPLYAWINIGKVSLEEVYDDLRKKGFDKVKSIAYLNDKVFAVDQHCFNVL IFPSHFKRELLNIDLIKDYKLIFQDKSRSLAVHSVKALINMDDDILMVNTGSWYTVAHMSILTS GNTSKIFVCGIESEEKDSDAKKLFTKMGCESMCRRLFDH hide sequence

RefSeq Acc Id:	XP_006251009 ⟸ XM_006250947
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZSS6 (UniProtKB/TrEMBL), A0A8I5YC52 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLDPNSAMDFFDQENMEELSQLASLEMSGDLVSKRKPSAALEKSSYPDSVYVTAANIFQGIRIQ RPADKVIINYGDELLPSSWTQAEEDSFQRLSYELAFSTLKYQDILESILIDTDIFSSTTIPDQL NSLIIVMLYDFQDRKFQPRVLPNDAVTIPEVQEVENLLNSFKTKLAAALARCRIKHDALSIYHI LPETVRKQEQRASTLPLYAWINIGKVSLEEVYDDLRKKGFDKVKSIAYLNDKVFAVDQHCFNVL IFPSHFKRELLNIDLIKDYKLIFQDKSRSLAVHSVKALINMDDDILMVNTGSWYTVAHMSILTS GNTSKIFVCGIESEEKDSDAKKLFTKMGCENIEILHETFLSIEPKDQRLQNVKVILLLPRCSSL GVSNPVEFILNEHEDTSLLQDLSQGGLPKDKLQIFAQQQFEQLTHAMKFAKAQAIVYCTCSVSE EENEEVVKKALEFQSPALKLQPYRLSPPVLPLCSLKEIELSMDRFFRLEPSDITNGCFLSILTR ERDPSETVSVKDVLARAAAKGLLDGVEVGKTLKRDKKRKKAKAPLPKAPPQADLAHDHSSVTGA DNSIQMKITEFLHRESKASAVKTPLPAKPVPQVAASSQIRKPSKPLSTPLVRTTRPSEKAGSFG RPRPEGKGIPLKPVEIILPPVTFPFSSPQGPRFQMPGTHFYYRFIGSKVGVPSHLTSMSRRKEK AKESVPSSFVRHPRPWL hide sequence

Ensembl Acc Id:

ENSRNOP00000037949 ⟸ ENSRNOT00000039835

RefSeq Acc Id:	XP_038947841 ⟸ XM_039091913
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038947843 ⟸ XM_039091915
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038947842 ⟸ XM_039091914
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038947844 ⟸ XM_039091916
- Peptide Label:	isoform X7

Ensembl Acc Id:

ENSRNOP00000080300 ⟸ ENSRNOT00000113567

Ensembl Acc Id:

ENSRNOP00000078036 ⟸ ENSRNOT00000112515

RefSeq Acc Id:	NP_001387847 ⟸ NM_001400918
- Peptide Label:	isoform 3
- UniProtKB:	F7EYR2 (UniProtKB/TrEMBL), A6JDC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001387846 ⟸ NM_001400917
- Peptide Label:	isoform 2
- UniProtKB:	A6JDC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001387845 ⟸ NM_001400916
- Peptide Label:	isoform 1
- UniProtKB:	A0A8I5ZSS6 (UniProtKB/TrEMBL), A0A8I5YC52 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063129193 ⟸ XM_063273123
- Peptide Label:	isoform X2
- UniProtKB:	F7EYR2 (UniProtKB/TrEMBL), A6JDC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063129195 ⟸ XM_063273125
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063129194 ⟸ XM_063273124
- Peptide Label:	isoform X6

Protein Domains

SAM-dependent MTase RsmB/NOP-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F7EYR2-F1-model_v2	AlphaFold	F7EYR2	1-702	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13699312

Promoter ID:

EPDNEW_R9833

Type:

initiation region

Name:

Nsun7_1

Description:

NOP2/Sun RNA methyltransferase family member 7

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	14	43,584,291 - 43,584,351	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310137	AgrOrtholog
BioCyc Gene	G2FUF-15764	BioCyc
Ensembl Genes	ENSRNOG00000025494	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000039835	ENTREZGENE
	ENSRNOT00000039835.7	UniProtKB/TrEMBL
	ENSRNOT00000112515.2	UniProtKB/TrEMBL
	ENSRNOT00000113567	ENTREZGENE
	ENSRNOT00000113567.2	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.150	UniProtKB/TrEMBL
	Sun protein, domain 3	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7135159	IMAGE-MGC_LOAD
InterPro	MeTrfase_RsmB-F_NOP2_cat	UniProtKB/TrEMBL
	MeTrfase_RsmB/NOP2	UniProtKB/TrEMBL
	NSUN7	UniProtKB/TrEMBL
	SAM-dependent_MTases	UniProtKB/TrEMBL
KEGG Report	rno:305339	UniProtKB/TrEMBL
MGC_CLONE	MGC:94486	IMAGE-MGC_LOAD
NCBI Gene	305339	ENTREZGENE
PANTHER	METHYLTRANSFERASE NSUN7-RELATED	UniProtKB/TrEMBL
	PTHR14663	UniProtKB/TrEMBL
Pfam	Nol1_Nop2_Fmu	UniProtKB/TrEMBL
PhenoGen	Nsun7	PhenoGen
PROSITE	SAM_MT_RSMB_NOP	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000025494	RatGTEx
Superfamily-SCOP	SSF53335	UniProtKB/TrEMBL
UniProt	A0A8I5YC52	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZSS6	ENTREZGENE, UniProtKB/TrEMBL
	A6JDC1	ENTREZGENE, UniProtKB/TrEMBL
	F7EYR2	ENTREZGENE, UniProtKB/TrEMBL
	Q5XIM6	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-11-30	Nsun7	NOP2/Sun RNA methyltransferase family member 7	Nsun7	NOP2/Sun domain family, member 7	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2011-08-02	Nsun7	NOP2/Sun domain family, member 7	Nsun7	NOL1/NOP2/Sun domain family, member 7	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-04	Nsun7	NOL1/NOP2/Sun domain family, member 7	RGD1310137	similar to NOL1R protein; Williams-Beuren syndrome critical region protein 20	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1310137	similar to NOL1R protein; Williams-Beuren syndrome critical region protein 20	RGD1310137_predicted	similar to NOL1R protein; Williams-Beuren syndrome critical region protein 20 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1310137_predicted	similar to NOL1R protein; Williams-Beuren syndrome critical region protein 20 (predicted)	LOC305339_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC305339_predicted	similar to NOL1R protein; Williams-Beuren syndrome critical region protein 20 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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