Dpm1 (dolichyl-phosphate mannosyltransferase subunit 1, catalytic) - Rat Genome Database

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Gene: Dpm1 (dolichyl-phosphate mannosyltransferase subunit 1, catalytic) Rattus norvegicus
Analyze
Symbol: Dpm1
Name: dolichyl-phosphate mannosyltransferase subunit 1, catalytic
RGD ID: 1310120
Description: Predicted to enable dolichyl-phosphate beta-D-mannosyltransferase activity. Predicted to be involved in glycolipid biosynthetic process and glycoprotein biosynthetic process. Predicted to act upstream of or within response to oxygen levels. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be part of dolichol-phosphate-mannose synthase complex. Predicted to be active in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Ie. Orthologous to human DPM1 (dolichyl-phosphate mannosyltransferase subunit 1, catalytic); PARTICIPATES IN N-linked glycan biosynthetic pathway; INTERACTS WITH 6-propyl-2-thiouracil; acetamide; aconitine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: dolichol-phosphate (beta-D) mannosyltransferase 1; dolichol-phosphate mannosyltransferase; dolichol-phosphate mannosyltransferase subunit 1; dolichyl-phosphate mannosyltransferase 1; dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit; LOC296394
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83177,338,855 - 177,358,398 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3177,338,855 - 177,358,412 (-)EnsemblGRCr8
mRatBN7.23156,919,979 - 156,939,522 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3156,919,979 - 156,939,536 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3160,714,775 - 160,734,318 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03169,213,873 - 169,233,416 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03166,955,573 - 166,975,116 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03164,966,637 - 164,986,180 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3164,966,637 - 164,986,180 (-)Ensemblrn6Rnor6.0
Rnor_5.03171,105,899 - 171,125,442 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43159,373,861 - 159,393,404 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3155,493,335 - 155,512,878 (-)NCBICelera
RGSC_v3.13159,281,124 - 159,299,441 (-)NCBI
Cytogenetic Map3q42NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Comprehensive gene review and curation RGD comprehensive gene curation
9. Activation of dolichol-phosphate mannosyltransferase by dibutryl cyclic AMP in rat liver. Sharma C, etal., Biochem Biophys Res Commun. 1988 Sep 15;155(2):615-21.
Additional References at PubMed
PMID:9535917   PMID:9724629   PMID:10835346   PMID:19946888   PMID:21630459  


Genomics

Comparative Map Data
Dpm1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83177,338,855 - 177,358,398 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3177,338,855 - 177,358,412 (-)EnsemblGRCr8
mRatBN7.23156,919,979 - 156,939,522 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3156,919,979 - 156,939,536 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3160,714,775 - 160,734,318 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03169,213,873 - 169,233,416 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03166,955,573 - 166,975,116 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03164,966,637 - 164,986,180 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3164,966,637 - 164,986,180 (-)Ensemblrn6Rnor6.0
Rnor_5.03171,105,899 - 171,125,442 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43159,373,861 - 159,393,404 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3155,493,335 - 155,512,878 (-)NCBICelera
RGSC_v3.13159,281,124 - 159,299,441 (-)NCBI
Cytogenetic Map3q42NCBI
DPM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382050,934,855 - 50,958,564 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2050,934,852 - 50,959,140 (-)Ensemblhg38GRCh38
GRCh372049,551,392 - 49,575,101 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362048,984,812 - 49,008,467 (-)NCBIBuild 36Build 36hg18NCBI36
Build 342048,984,811 - 49,008,467NCBI
Celera2046,255,665 - 46,279,320 (-)NCBICelera
Cytogenetic Map20q13.13NCBI
HuRef2046,299,500 - 46,323,631 (-)NCBIHuRef
CHM1_12049,456,677 - 49,480,351 (-)NCBICHM1_1
T2T-CHM13v2.02052,705,454 - 52,729,167 (-)NCBIT2T-CHM13v2.0
Dpm1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392168,050,968 - 168,072,299 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2168,050,968 - 168,072,511 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm382168,209,048 - 168,230,379 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2168,209,048 - 168,230,591 (-)Ensemblmm10GRCm38
MGSCv372168,034,548 - 168,055,879 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv362167,900,265 - 167,921,576 (-)NCBIMGSCv36mm8
Celera2174,153,552 - 174,174,484 (-)NCBICelera
Cytogenetic Map2H3NCBI
cM Map288.46NCBI
Dpm1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554457,472,562 - 7,495,774 (+)Ensembl
ChiLan1.0NW_0049554457,472,579 - 7,492,632 (+)NCBIChiLan1.0ChiLan1.0
DPM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22156,683,799 - 56,712,270 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12056,676,916 - 56,702,826 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02047,279,515 - 47,305,429 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12048,406,341 - 48,432,235 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2048,406,342 - 48,432,220 (-)EnsemblpanPan2panpan1.1
DPM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12437,249,203 - 37,268,620 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2437,249,502 - 37,268,587 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2436,489,976 - 36,510,607 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02437,957,602 - 37,978,236 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2437,957,599 - 37,978,215 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12437,193,088 - 37,213,735 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02437,326,999 - 37,347,628 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02437,872,031 - 37,892,670 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Dpm1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640188,378,622 - 188,397,128 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365143,832,272 - 3,851,829 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365143,832,284 - 3,850,064 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DPM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1752,351,855 - 52,377,067 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11752,351,852 - 52,377,066 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21758,791,904 - 58,817,123 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DPM1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1213,014,501 - 13,033,779 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605061,447,427 - 61,466,725 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dpm1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247904,798,426 - 4,819,630 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247904,798,433 - 4,819,192 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Dpm1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v15149,779,649 - 149,797,704 (+)NCBIRrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:199
Count of miRNA genes:139
Interacting mature miRNAs:168
Transcripts:ENSRNOT00000016150
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2301411Bp320Blood pressure QTL 3200.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3141555229186555229Rat
12879876Bw182Body weight QTL 1820.003body mass (VT:0001259)body weight (CMO:0000012)3141555229186555229Rat
1582233Insul10Insulin level QTL 105.40.0015blood insulin amount (VT:0001560)serum insulin level times blood glucose level (CMO:0002040)3133259579178259579Rat
1300113Bp176Blood pressure QTL 1763.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3166376089177728348Rat
12879872Cm97Cardiac mass QTL 970.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)3141555229186555229Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3151075912189428310Rat
12879873Cm96Cardiac mass QTL 960.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)3141555229186555229Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)3129154923182114333Rat
12879874Cm98Cardiac mass QTL 980.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)3141555229186555229Rat
1298068Bp167Blood pressure QTL 1670.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3161492708189428310Rat
12879875Kidm64Kidney mass QTL 640.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3141555229186555229Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
8552791Vie2Viral induced encephalitis QTL 24.1brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)3166376089189428310Rat
1331726Bp208Blood pressure QTL 2083.129arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3161799270187311134Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3133134628178134628Rat
1582213Insul6Insulin level QTL 63.70.0009blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)3155759447189428310Rat
1598854Memor10Memory QTL 102exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)3166376089189428310Rat
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3152055202189428310Rat
10755461Coatc16Coat color QTL 16coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)3142898802187898802Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)379649560177741895Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)3145335553189428310Rat
1582256Insul9Insulin level QTL 94.40.0016blood insulin amount (VT:0001560)absolute change in serum insulin level (CMO:0002038)3155759447189428310Rat
1576306Schws3Schwannoma susceptibility QTL 30.001nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)3139299381184299381Rat
1300159Kidm4Kidney mass QTL 43.83kidney mass (VT:0002707)right kidney wet weight to body weight ratio (CMO:0001953)3141508991177728348Rat
631673Iddm13Insulin dependent diabetes mellitus QTL 131.30.663blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)3137114333182114333Rat
1582248Insul7Insulin level QTL 73.90.0041blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)3155759447189428310Rat
1578666Vnigr1Vascular neointimal growth QTL 14.6artery morphology trait (VT:0002191)artery lumen area (CMO:0001409)3151075912189428310Rat
1578656Vnigr2Vascular neointimal growth QTL 24.2artery morphology trait (VT:0002191)lesioned artery residual lumen area (CMO:0001417)3151075912189428310Rat
12879871Am7Aortic mass QTL 70.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)3141555229186555229Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3144575244189428310Rat

Markers in Region
RH143834  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23156,939,485 - 156,939,675 (+)MAPPERmRatBN7.2
Rnor_6.03164,986,144 - 164,986,333NCBIRnor6.0
Rnor_5.03171,125,406 - 171,125,595UniSTSRnor5.0
RGSC_v3.43159,393,368 - 159,393,557UniSTSRGSC3.4
Celera3155,512,842 - 155,513,031UniSTS
RH 3.4 Map31482.5UniSTS
Cytogenetic Map3q42UniSTS
BE114634  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23156,940,222 - 156,940,432 (+)MAPPERmRatBN7.2
Rnor_6.03164,986,881 - 164,987,090NCBIRnor6.0
Rnor_5.03171,126,143 - 171,126,352UniSTSRnor5.0
RGSC_v3.43159,394,105 - 159,394,314UniSTSRGSC3.4
Celera3155,513,579 - 155,513,788UniSTS
RH 3.4 Map31478.2UniSTS
Cytogenetic Map3q42UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000016150   ⟹   ENSRNOP00000016150
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3177,338,855 - 177,358,398 (-)Ensembl
mRatBN7.2 Ensembl3156,919,979 - 156,939,522 (-)Ensembl
Rnor_6.0 Ensembl3164,966,637 - 164,986,180 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000105893   ⟹   ENSRNOP00000084837
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3177,338,855 - 177,358,398 (-)Ensembl
mRatBN7.2 Ensembl3156,921,202 - 156,939,503 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000108284   ⟹   ENSRNOP00000093945
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3177,338,855 - 177,358,412 (-)Ensembl
mRatBN7.2 Ensembl3156,919,979 - 156,939,536 (-)Ensembl
RefSeq Acc Id: NM_001106544   ⟹   NP_001100014
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83177,338,855 - 177,358,398 (-)NCBI
mRatBN7.23156,919,979 - 156,939,522 (-)NCBI
Rnor_6.03164,966,637 - 164,986,180 (-)NCBI
Rnor_5.03171,105,899 - 171,125,442 (-)NCBI
RGSC_v3.43159,373,861 - 159,393,404 (-)RGD
Celera3155,493,335 - 155,512,878 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001100014 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL96369 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000016150
  ENSRNOP00000016150.5
  ENSRNOP00000084837.1
  ENSRNOP00000093945.1
RefSeq Acc Id: NP_001100014   ⟸   NM_001106544
- UniProtKB: D4A8N1 (UniProtKB/TrEMBL),   A6JXN5 (UniProtKB/TrEMBL),   A0A8I6A008 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000016150   ⟸   ENSRNOT00000016150
Ensembl Acc Id: ENSRNOP00000093945   ⟸   ENSRNOT00000108284
Ensembl Acc Id: ENSRNOP00000084837   ⟸   ENSRNOT00000105893
Protein Domains
Glycosyltransferase 2-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A8N1-F1-model_v2 AlphaFold D4A8N1 1-260 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13692697
Promoter ID:EPDNEW_R3222
Type:multiple initiation site
Name:Dpm1_1
Description:dolichyl-phosphate mannosyltransferase subunit 1, catalytic
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.03164,986,163 - 164,986,223EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1310120 AgrOrtholog
BioCyc Gene G2FUF-46705 BioCyc
BioCyc Pathway MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS [protein N-glycosylation initial phase (eukaryotic)] BioCyc
  PWY-7922 [protein O-mannosylation II (mammals, core M1 and core M2)] BioCyc
  PWY-7979 [protein O-mannosylation III (mammals, core M3)] BioCyc
BioCyc Pathway Image MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS BioCyc
  PWY-7922 BioCyc
  PWY-7979 BioCyc
Ensembl Genes ENSRNOG00000010993 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000016150 ENTREZGENE
  ENSRNOT00000016150.7 UniProtKB/TrEMBL
  ENSRNOT00000105893.2 UniProtKB/TrEMBL
  ENSRNOT00000108284.2 UniProtKB/TrEMBL
Gene3D-CATH Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A UniProtKB/TrEMBL
InterPro DPM1-like UniProtKB/TrEMBL
  Glyco_trans_2 UniProtKB/TrEMBL
  Nucleotide-diphossugar_trans UniProtKB/TrEMBL
KEGG Report rno:296394 UniProtKB/TrEMBL
NCBI Gene 296394 ENTREZGENE
PANTHER DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 1 UniProtKB/TrEMBL
  PTHR43398 UniProtKB/TrEMBL
Pfam Glycos_transf_2 UniProtKB/TrEMBL
PhenoGen Dpm1 PhenoGen
RatGTEx ENSRNOG00000010993 RatGTEx
Superfamily-SCOP SSF53448 UniProtKB/TrEMBL
UniProt A0A8I6A008 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GKW5_RAT UniProtKB/TrEMBL
  A6JXN5 ENTREZGENE, UniProtKB/TrEMBL
  D4A8N1 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-07-27 Dpm1  dolichyl-phosphate mannosyltransferase subunit 1, catalytic  Dpm1  dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-11-11 Dpm1  dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit  Dpm1  dolichol-phosphate (beta-D) mannosyltransferase 1   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Dpm1  dolichol-phosphate (beta-D) mannosyltransferase 1   Dpm1_predicted  dolichol-phosphate (beta-D) mannosyltransferase 1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Dpm1_predicted  dolichol-phosphate (beta-D) mannosyltransferase 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED