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Gene: Rbm39 (RNA binding motif protein 39) Rattus norvegicus

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Symbol:

Rbm39

Name:

RNA binding motif protein 39

RGD ID:

1310071

Description:

Predicted to enable RS domain binding activity. Predicted to be involved in regulation of mRNA splicing, via spliceosome. Predicted to be located in nuclear speck. Predicted to be part of protein-containing complex. Orthologous to human RBM39 (RNA binding motif protein 39); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 3H-1,2-dithiole-3-thione.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC100910882; LOC362251; MGC109490; RNA-binding protein 39; RNA-binding protein 39-like; RNA-binding region (RNP1, RRM) containing 2; RNA-binding region-containing 2; Rnp1; Rnpc2; Rrm

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RBM39 (RNA binding motif protein 39)	HGNC	EggNOG, Ensembl, Inparanoid, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Rbm39 (RNA binding motif protein 39)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rbm39 (RNA binding motif protein 39)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RBM39 (RNA binding motif protein 39)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RBM39 (RNA binding motif protein 39)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rbm39 (RNA binding motif protein 39)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RBM39 (RNA binding motif protein 39)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RBM39 (RNA binding motif protein 39)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rbm39 (RNA binding motif protein 39)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Rbm39 (RNA binding motif protein 39)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	LEMD3 (LEM domain containing 3)	HGNC	Panther
Alliance orthologs ³
Homo sapiens (human):	RBM39 (RNA binding motif protein 39)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rbm39 (RNA binding motif protein 39)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rbm39b (RNA binding motif protein 39b)	Alliance	DIOPT (Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	rbm39b (RNA binding motif protein 39b)	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	rbm39a (RNA binding motif protein 39a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	rbm-39	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	rbm-39	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Caper	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rbm39	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rbm39	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	165,123,087 - 165,156,453 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	165,123,095 - 165,149,397 (-)	Ensembl				GRCr8
mRatBN7.2	3	144,662,998 - 144,696,222 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	144,663,001 - 144,696,213 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	148,528,781 - 148,561,928 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	157,146,051 - 157,179,198 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	154,885,576 - 154,918,724 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	151,691,498 - 151,724,723 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	151,691,514 - 151,724,654 (-)	Ensembl			rn6	Rnor6.0
Rnor_6.0 Ensembl	3	152,226,710 - 152,259,156 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	158,056,123 - 158,089,351 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	146,555,202 - 146,587,650 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	143,385,461 - 143,417,910 (-)	NCBI		Celera
RGSC_v3.1	3	146,461,112 - 146,493,559 (-)	NCBI
Cytogenetic Map	3	q42	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,4,6-tribromophenol (ISO)

2-amino-2-deoxy-D-glucopyranose (ISO)

2-bromohexadecanoic acid (ISO)

2-butoxyethanol (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

3H-1,2-dithiole-3-thione (EXP)

4,4'-sulfonyldiphenol (EXP,ISO)

6-propyl-2-thiouracil (EXP)

acetazolamide (ISO)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (EXP,ISO)

aldehydo-D-glucosamine (ISO)

alpha-pinene (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

Aroclor 1254 (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene diol epoxide I (ISO)

beta-D-glucosamine (ISO)

beta-lapachone (ISO)

bilirubin IXalpha (ISO)

bis(2-chloroethyl) sulfide (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

carbon nanotube (ISO)

chloroprene (EXP)

chlorpyrifos (EXP)

chrysene (ISO)

copper(II) sulfate (ISO)

coumarin (ISO)

curcumin (ISO)

cyclosporin A (ISO)

decabromodiphenyl ether (ISO)

deoxynivalenol (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (ISO)

dicrotophos (ISO)

diuron (EXP,ISO)

doxorubicin (ISO)

endosulfan (EXP)

ethanol (ISO)

ferroheme b (ISO)

folic acid (ISO)

formaldehyde (ISO)

FR900359 (ISO)

gentamycin (EXP)

heme b (ISO)

hydrogen peroxide (ISO)

indometacin (ISO)

mercury dichloride (ISO)

methimazole (EXP)

methylmercury chloride (ISO)

microcystin-LR (ISO)

mono(2-ethylhexyl) phthalate (ISO)

Monobutylphthalate (ISO)

N-methyl-4-phenylpyridinium (ISO)

nefazodone (EXP)

nimesulide (EXP)

nitrates (ISO)

ozone (ISO)

paracetamol (ISO)

perfluorooctane-1-sulfonic acid (EXP,ISO)

phenobarbital (ISO)

pirinixic acid (EXP,ISO)

propiconazole (EXP,ISO)

quercitrin (ISO)

quinomethionate (ISO)

resveratrol (EXP,ISO)

rotenone (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

streptozocin (EXP)

succimer (ISO)

sulfadimethoxine (EXP)

sunitinib (ISO)

tamoxifen (ISO)

tetrahydropalmatine (ISO)

tetraphene (ISO)

thapsigargin (ISO)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

torcetrapib (ISO)

Tributyltin oxide (ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vorinostat (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mRNA processing (IEA)

positive regulation of DNA-templated transcription (IEA)

regulation of mRNA splicing, via spliceosome (IEA,ISO)

regulation of transcription by RNA polymerase II (ISO)

Cellular Component

nuclear speck (IEA,ISO)

nucleus (IEA)

protein-containing complex (IEA,ISO)

Molecular Function

nucleic acid binding (IEA)

protein binding (ISO)

RNA binding (IEA)

RS domain binding (IEA,ISO)

transcription coactivator activity (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	GOA pipeline	RGD automated data pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:15453907	PMID:15694343	PMID:22658674	PMID:22681889	PMID:28302793	PMID:28437394

Genomics

Comparative Map Data

Rbm39
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	165,123,087 - 165,156,453 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	165,123,095 - 165,149,397 (-)	Ensembl				GRCr8
mRatBN7.2	3	144,662,998 - 144,696,222 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	144,663,001 - 144,696,213 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	148,528,781 - 148,561,928 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	157,146,051 - 157,179,198 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	154,885,576 - 154,918,724 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	151,691,498 - 151,724,723 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	151,691,514 - 151,724,654 (-)	Ensembl			rn6	Rnor6.0
Rnor_6.0 Ensembl	3	152,226,710 - 152,259,156 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	158,056,123 - 158,089,351 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	146,555,202 - 146,587,650 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	143,385,461 - 143,417,910 (-)	NCBI		Celera
RGSC_v3.1	3	146,461,112 - 146,493,559 (-)	NCBI
Cytogenetic Map	3	q42	NCBI

RBM39
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	35,701,347 - 35,742,260 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	35,701,347 - 35,742,312 (-)	Ensembl			hg38	GRCh38
GRCh37	20	34,289,269 - 34,330,182 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	33,754,945 - 33,793,607 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	20	33,754,944 - 33,793,607	NCBI
Celera	20	31,039,826 - 31,078,484 (-)	NCBI		Celera
Cytogenetic Map	20	q11.22	NCBI
HuRef	20	31,068,914 - 31,107,649 (-)	NCBI		HuRef
CHM1_1	20	34,193,463 - 34,232,187 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	20	37,422,322 - 37,463,242 (-)	NCBI		T2T-CHM13v2.0

Rbm39
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	155,989,159 - 156,022,649 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	155,989,159 - 156,022,158 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	156,147,239 - 156,180,238 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	156,147,239 - 156,180,238 (-)	Ensembl			mm10	GRCm38
MGSCv37	2	155,972,975 - 156,005,976 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	155,839,078 - 155,871,581 (-)	NCBI		MGSCv36	mm8
Celera	2	162,082,815 - 162,115,677 (-)	NCBI		Celera
Cytogenetic Map	2	H1	NCBI
cM Map	2	77.36	NCBI

Rbm39
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	25,719,771 - 25,755,757 (+)	Ensembl
ChiLan1.0	NW_004955422	25,719,771 - 25,755,757 (+)	NCBI	ChiLan1.0	ChiLan1.0

RBM39
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	41,436,065 - 41,474,664 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	41,429,168 - 41,467,767 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	32,030,938 - 32,069,442 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	33,151,973 - 33,191,072 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	33,151,973 - 33,191,072 (-)	Ensembl			panPan2	panpan1.1

RBM39
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	24,618,966 - 24,648,384 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	24,619,691 - 24,648,474 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	24,263,987 - 24,293,214 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	25,311,461 - 25,340,682 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	25,311,465 - 25,340,769 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	24,597,750 - 24,627,188 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	24,692,832 - 24,722,288 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	25,132,248 - 25,161,470 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Rbm39
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	173,618,812 - 173,650,017 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936561	5,099,580 - 5,128,134 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936561	5,099,052 - 5,149,947 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RBM39
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	39,031,957 - 39,063,699 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	17	39,032,141 - 39,064,803 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	44,382,747 - 44,415,404 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RBM39
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	56,621,692 - 56,645,028 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	56,622,562 - 56,644,921 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666087	2,964,723 - 3,004,111 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rbm39
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624842	3,698,632 - 3,733,221 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624842	3,698,630 - 3,733,221 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Rbm39
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	135,506,482 - 135,540,247 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Rbm39
224 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	417
Count of miRNA genes:	208
Interacting mature miRNAs:	237
Transcripts:	ENSRNOT00000026964, ENSRNOT00000065729
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
12879876	Bw182	Body weight QTL 182		0.003	body mass (VT:0001259)	body weight (CMO:0000012)	3	141555229	186555229	Rat
2301411	Bp320	Blood pressure QTL 320		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	141555229	186555229	Rat
1582233	Insul10	Insulin level QTL 10	5.4	0.0015	blood insulin amount (VT:0001560)	serum insulin level times blood glucose level (CMO:0002040)	3	133259579	178259579	Rat
12879872	Cm97	Cardiac mass QTL 97		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	141555229	186555229	Rat
12879873	Cm96	Cardiac mass QTL 96		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	3	141555229	186555229	Rat
1578653	Vnigr3	Vascular neointimal growth QTL 3	3.1		artery morphology trait (VT:0002191)	artery neointimal hyperplastic lesion area (CMO:0001414)	3	151075912	189428310	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	129154923	182114333	Rat
12879874	Cm98	Cardiac mass QTL 98		0.005	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	3	141555229	186555229	Rat
12879875	Kidm64	Kidney mass QTL 64		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	141555229	186555229	Rat
1298068	Bp167	Blood pressure QTL 167		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	161492708	189428310	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	67641776	167835660	Rat
61335	Bp20	Blood pressure QTL 20	3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	161799493	176036425	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	133134628	178134628	Rat
1331726	Bp208	Blood pressure QTL 208	3.129		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	161799270	187311134	Rat
1582213	Insul6	Insulin level QTL 6	3.7	0.0009	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
1300173	Rf11	Renal function QTL 11	3.38		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	141508991	166376254	Rat
9589106	Insul23	Insulin level QTL 23	13.86	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	3	152055202	189428310	Rat
10755461	Coatc16	Coat color QTL 16			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	3	142898802	187898802	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	79649560	177741895	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	145335553	189428310	Rat
2303620	Vencon4	Ventilatory control QTL 4	3.9		respiration trait (VT:0001943)	tidal volume (CMO:0000222)	3	125116475	170116475	Rat
1582256	Insul9	Insulin level QTL 9	4.4	0.0016	blood insulin amount (VT:0001560)	absolute change in serum insulin level (CMO:0002038)	3	155759447	189428310	Rat
1576306	Schws3	Schwannoma susceptibility QTL 3		0.001	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	3	139299381	184299381	Rat
5686842	Rf59	Renal function QTL 59			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	3	122395989	167395989	Rat
1300159	Kidm4	Kidney mass QTL 4	3.83		kidney mass (VT:0002707)	right kidney wet weight to body weight ratio (CMO:0001953)	3	141508991	177728348	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	131036586	176036586	Rat
631673	Iddm13	Insulin dependent diabetes mellitus QTL 13	1.3	0.663	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	3	137114333	182114333	Rat
1582248	Insul7	Insulin level QTL 7	3.9	0.0041	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	131036586	176036586	Rat
1581546	Pur13	Proteinuria QTL 13	2.93	0.0335	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	3	98651826	167012663	Rat
1578666	Vnigr1	Vascular neointimal growth QTL 1	4.6		artery morphology trait (VT:0002191)	artery lumen area (CMO:0001409)	3	151075912	189428310	Rat
1578656	Vnigr2	Vascular neointimal growth QTL 2	4.2		artery morphology trait (VT:0002191)	lesioned artery residual lumen area (CMO:0001417)	3	151075912	189428310	Rat
12879871	Am7	Aortic mass QTL 7		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	3	141555229	186555229	Rat
631541	Bp81	Blood pressure QTL 81	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	144575244	189428310	Rat
2293087	Iddm27	Insulin dependent diabetes mellitus QTL 27	2.68		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	160357340	167835660	Rat

Markers in Region

RH129887

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	144,663,028 - 144,663,245 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	152,226,045 - 152,226,261	NCBI	Rnor6.0
Rnor_6.0	3	151,691,532 - 151,691,748	NCBI	Rnor6.0
Rnor_5.0	3	159,464,520 - 159,464,736	UniSTS	Rnor5.0
Rnor_5.0	3	158,056,150 - 158,056,366	UniSTS	Rnor5.0
RGSC_v3.4	3	146,554,539 - 146,554,755	UniSTS	RGSC3.4
Celera	3	143,384,798 - 143,385,014	UniSTS
RH 3.4 Map	8	1000.39	UniSTS
Cytogenetic Map	3	q42	UniSTS

AI578416

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	144,672,419 - 144,672,545 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	152,235,436 - 152,235,561	NCBI	Rnor6.0
Rnor_6.0	3	151,700,923 - 151,701,048	NCBI	Rnor6.0
Rnor_5.0	3	159,455,220 - 159,455,345	UniSTS	Rnor5.0
Rnor_5.0	3	158,065,541 - 158,065,666	UniSTS	Rnor5.0
RGSC_v3.4	3	146,563,930 - 146,564,055	UniSTS	RGSC3.4
Celera	3	143,394,189 - 143,394,314	UniSTS
RH 3.4 Map	3	1293.9	UniSTS
Cytogenetic Map	3	q42	UniSTS

BM388276

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	144,687,968 - 144,688,122 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	152,250,985 - 152,251,138	NCBI	Rnor6.0
Rnor_6.0	3	151,716,472 - 151,716,625	NCBI	Rnor6.0
Rnor_5.0	3	159,439,643 - 159,439,796	UniSTS	Rnor5.0
Rnor_5.0	3	158,081,090 - 158,081,243	UniSTS	Rnor5.0
RGSC_v3.4	3	146,579,479 - 146,579,632	UniSTS	RGSC3.4
Celera	3	143,409,739 - 143,409,892	UniSTS
RH 3.4 Map	3	1294.1	UniSTS
Cytogenetic Map	3	q42	UniSTS

stSG636839

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	144,693,891 - 144,695,020 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	152,256,908 - 152,258,036	NCBI	Rnor6.0
Rnor_6.0	3	151,722,395 - 151,723,523	NCBI	Rnor6.0
Rnor_5.0	3	158,087,013 - 158,088,141	UniSTS	Rnor5.0
Rnor_5.0	3	159,432,745 - 159,433,873	UniSTS	Rnor5.0
RGSC_v3.4	3	146,585,402 - 146,586,530	UniSTS	RGSC3.4
Celera	3	143,415,662 - 143,416,790	UniSTS
Cytogenetic Map	3	q42	UniSTS

MARC_17207-17208:1023890900:1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	144,693,476 - 144,693,979 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	152,256,493 - 152,256,995	NCBI	Rnor6.0
Rnor_6.0	3	151,721,980 - 151,722,482	NCBI	Rnor6.0
Rnor_5.0	3	158,086,598 - 158,087,100	UniSTS	Rnor5.0
Rnor_5.0	3	159,433,786 - 159,434,288	UniSTS	Rnor5.0
RGSC_v3.4	3	146,584,987 - 146,585,489	UniSTS	RGSC3.4
Celera	3	143,415,247 - 143,415,749	UniSTS
Cytogenetic Map	3	q42	UniSTS

G64285

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	3	165,155,298 - 165,156,059 (+)	Marker Load Pipeline
mRatBN7.2	3	144,695,213 - 144,695,975 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	151,723,717 - 151,724,478	NCBI	Rnor6.0
Rnor_6.0	3	152,258,230 - 152,258,991	NCBI	Rnor6.0
Rnor_5.0	3	159,431,790 - 159,432,551	UniSTS	Rnor5.0
Rnor_5.0	3	158,088,335 - 158,089,096	UniSTS	Rnor5.0
RGSC_v3.4	3	146,586,724 - 146,587,485	UniSTS	RGSC3.4
Celera	3	143,416,984 - 143,417,745	UniSTS
Cytogenetic Map	3	q42	UniSTS

ECD08795

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	144,664,056 - 144,665,030 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	152,227,073 - 152,228,046	NCBI	Rnor6.0
Rnor_6.0	3	151,692,560 - 151,693,533	NCBI	Rnor6.0
Rnor_5.0	3	158,057,178 - 158,058,151	UniSTS	Rnor5.0
Rnor_5.0	3	159,462,735 - 159,463,708	UniSTS	Rnor5.0
RGSC_v3.4	3	146,555,567 - 146,556,540	UniSTS	RGSC3.4
Celera	3	143,385,826 - 143,386,799	UniSTS
Cytogenetic Map	3	q42	UniSTS

REN58939

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	144,694,875 - 144,695,122 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	152,257,892 - 152,258,138	NCBI	Rnor6.0
Rnor_6.0	3	151,723,379 - 151,723,625	NCBI	Rnor6.0
Rnor_5.0	3	158,087,997 - 158,088,243	UniSTS	Rnor5.0
RGSC_v3.4	3	146,586,386 - 146,586,632	UniSTS	RGSC3.4
Celera	3	143,416,646 - 143,416,892	UniSTS
Cytogenetic Map	3	q42	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
19	1	30	114	68	60	36	79	36	12	254	143	11	89	56	70	24	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001013207	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235331	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235332	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235335	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762349	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762350	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762351	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591925	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105498	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284180	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284181	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284182	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284183	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284184	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC118414	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY769432	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC078917	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC091394	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ220141	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225540	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225643	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226429	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226699	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226985	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227428	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227690	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227784	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227850	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ231143	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ232143	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ232377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ232600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ232619	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ232831	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ232842	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ233429	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ233992	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000026964 ⟹ ENSRNOP00000026964

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	165,123,095 - 165,149,397 (-)	Ensembl
mRatBN7.2 Ensembl	3	144,663,003 - 144,696,197 (-)	Ensembl
Rnor_6.0 Ensembl	3	151,691,514 - 151,724,654 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000065729 ⟹ ENSRNOP00000060273

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	144,663,005 - 144,696,193 (-)	Ensembl
Rnor_6.0 Ensembl	3	152,226,710 - 152,259,156 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000111677 ⟹ ENSRNOP00000094754

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	144,691,061 - 144,696,213 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000112953 ⟹ ENSRNOP00000089286

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	144,663,005 - 144,696,193 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117296 ⟹ ENSRNOP00000090119

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	144,663,001 - 144,696,169 (-)	Ensembl

RefSeq Acc Id:

NM_001013207 ⟹ NP_001013225

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,123,089 - 165,156,235 (-)	NCBI
mRatBN7.2	3	144,663,005 - 144,696,151 (-)	NCBI
Rnor_6.0	3	151,691,508 - 151,724,654 (-)	NCBI
Rnor_5.0	3	158,056,123 - 158,089,351 (-)	NCBI
RGSC_v3.4	3	146,555,202 - 146,587,650 (-)	RGD
Celera	3	143,384,774 - 143,417,921 (-)	NCBI

Sequence:

show sequence

CAGGGAGCTAGCCGACGCTGTCGCAGGGGTGGATCCTGAGCTGCCGAAGCCGCTGCCCTGCTCT
CCGTCGCGGGCTCCTTTAATCCCATTGTTTCTTTTAGATTCGTTTGGGCCTAGACGCCCTCGGG
GCCCGATATTCGGGTTGGGCGGTACCGCGGCCTGGGCCTAGTGACTTAACAGTAGCAACAGCAG
CGGCGGCGGCGGCAGCCGACTTCCCGATTCGAGCACAGGCGCGCGAAAATCCGCACAGGCGAGT
AGAGAAAATGGCAGACGATATTGATATTGAAGCAATGCTTGAGGCCCCTTACAAGAAGGATGAG
AACAAGTTGAACAGTGCTAACGGCCATGAAGAACGTAGCAAAAAGAGAAAAAAAAGCAAGAGCA
GAAGCCGTAGTCATGAGAGAAAAAGAAGCAAAAGTAAAGAACGGAAACGAAGTAGAGATAGAGA
AAGGAAAAAGAGCAAAAGTCGAGAGAGGAAACGAAGTAGAAGCAAAGAAAGGAGACGAAGCCGC
TCACGAAGTCGAGATAGAAGATTCCGAGGCCGCTACAGAAGTCCCTACTCCGGACCAAAATTTA
ACAGTGCCATCCGAGGAAAGATTGGGTTGCCTCATAGCATCAAATTAAGCAGAAGACGTTCCCG
AAGCAAAAGTCCATTCAGGAAAGACAAGAGCCCTGTGAGGGAACCTATTGATAATCTCACTCCT
GAGGAAAGGGATGCAAGGACAGTTTTCTGCATGCAGCTGGCAGCAAGAATTCGACCAAGAGATT
TGGAAGAATTTTTCTCTACAGTAGGAAAGGTTCGAGATGTGAGAATGATTTCTGATAGAAATTC
AAGACGTTCCAAAGGAATCGCCTATGTGGAGTTTGTTGATGTCAGTTCAGTGCCTCTAGCAATT
GGATTAACTGGTCAACGAGTTTTAGGAGTGCCAATCATAGTCCAGGCATCACAGGCAGAAAAAA
ACAGAGCTGCTGCAATGGCGAACAATTTACAAAAGGGAAGTGCTGGACCTATGAGGCTCTATGT
GGGATCATTACACTTTAACATAACTGAAGATATGCTTCGGGGAATCTTTGAACCTTTTGGAAGG
ATTGAAAGTATTCAGCTCATGATGGATAGTGAAACCGGTCGATCTAAGGGATATGGATTCATTA
CCTTTTCTGACTCAGAATGTGCCAAAAAGGCTTTGGAACAGCTTAATGGATTCGAGTTAGCAGG
GAGACCAATGAAAGTTGGTCATGTTACTGAACGAACTGATGCATCTAGCGCTAGTTCATTTTTG
GACAGTGATGAATTAGAAAGGACTGGAATTGACTTGGGAACAACAGGTCGTCTCCAGTTGATGG
CAAGACTTGCAGAGGGTACCGGTTTGCAGATTCCACCAGCAGCACAACAAGCTTTACAAATGAG
TGGCTCTCTGGCATTTGGTGCTGTGGCAGATTTGCAAACACGACTTTCCCAACAGACTGAAGCC
TCAGCTTTAGCTGCAGCTGCGTCTGTTCAACCTCTTGCAACACAGTGTTTCCAACTTTCTAACA
TGTTTAATCCTCAAACAGAAGAAGAAGTTGGATGGGATACAGAGATTAAAGATGATGTCATTGA
AGAATGTAATAAACATGGTGGAGTCATTCATATTTATGTTGACAAAAATTCAGCTCAGGGCAAT
GTGTATGTGAAGTGCCCATCGATTGCTGCGGCTATTGCTGCTGTCAATGCGTTGCATGGCAGGT
GGTTTGCTGGTAAAATGATAACAGCAGCGTATGTACCTCTTCCAACATACCACAACCTCTTTCC
TGATTCCATGACAGCAACACAACTACTGGTTCCAAGTAGACGATGAAGGAGATGCAGTCCCTGA
TGTATATAGCTTTTTTTTCTCTTGAGAATTCATCTTGAGTTATCTTTTATTTAGATAAAAAATA
AAGAGGCAAGGGTCTACTGTCATTTGTATACAACTCCTGTTATCTGGAAAAATAAAAATGTTAA
CAGGAATGCAGTGTGCTCATTCTCCCTAACTAGCAAATCCTACTTTATGCAAAACTGTTCTCTT
GTTCTGCTGTTTTAAATGTCCATGTAGAAAATTACATTAAGGATCTATAGAATAGCTCTAGGGG
AACAAATGTGCTTTCTGTACAAAGGCAGACAGGTAATGTTTTAATGTTTCAGAAACTTAACTTT
TTACACAGCAGTTACATTTCACATTCATGTATTCGGCTCATGGTTCAGCAAAGGTTTCCAGAAT
ACACTTTTGGAGTGTGAAAAGTCTAAGTTGCTAAATGGCTGCTTAGCATTTGACCTTGACCATT
TGGAAAGTGGGGGATTTCAAAATATTTCTTGATGGTAAATTTTTCAATTACTGTATCTGTAAAA
GTTTCTTTGTAAATACTATGTGTTTTAGTGTGTCTTAAGATTCCAAACAAAATGATCCCTGCAT
TTCCTCAAGGTGGTTGATGTAACAGATTGAGTAAAACAGTCTTGGGCAAGAGATAGGAAATGTG
GAAATAGGTTTTGTCTGGTTGCATATAATCTTTGCTCTTTTTAAGCTCTGTGAGCTCTGAAATA
TATTTTTGGGTTACTTCAGTGTGTTTGACAAGACAGCTTGATATTTCTATCAAACAAATGACTT
TCATATTGCAACAATCTTTGTAAGAACCACTCAAATAAAATTCTCTGAAAAAGAAAAAAAAAAA
AAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006235331 ⟹ XP_006235393

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,123,087 - 165,156,453 (-)	NCBI
mRatBN7.2	3	144,662,998 - 144,696,217 (-)	NCBI
Rnor_6.0	3	151,691,498 - 151,724,720 (-)	NCBI
Rnor_5.0	3	158,056,123 - 158,089,351 (-)	NCBI

Sequence:

show sequence

CCCCGGGTGTTTGTGTGTGTGTATGTGTTGGTGAATGTGAATACGGAGGAGCAGCGGCCGCCAT
TTCAGGGAGCTAGCCGACGCTGTCGCAGGGGTGGATCCTGAGCTGCCGAAGCCGCTGCCCTGCT
CTCCGTCGCGGGCTCCTTTAATCCCATTGTTTCTTTTAGATTCGTTTGGGCCTAGACGCCCTCG
GGGCCCGATATTCGGGTTGGGCGGTACCGCGGCCTGGGCCTAGTGACTTAACAGTAGCAACAGC
AGCGGCGGCGGCGGCAGCCGACTTCCCGATTCGAGCACAGGCGCGCGAAAATCCGCACAGGCGA
GTAGAGAAAATGGCAGACGATATTGATATTGAAGCAATGCTTGAGGCCCCTTACAAGAAGGATG
AGAACAAGTTGAACAGTGCTAACGGCCATGAAGAACGTAGCAAAAAGAGAAAAAAAAGCAAGAG
CAGAAGCCGTAGTCATGAGAGAAAAAGAAGCAAAAGTAAAGAACGGAAACGAAGTAGAGATAGA
GAAAGGAAAAAGAGCAAAAGTCGAGAGAGGAAACGAAGTAGAAGCAAAGAAAGGAGACGAAGCC
GCTCACGAAGTCGAGATAGAAGATTCCGAGGCCGCTACAGAAGTCCCTACTCCGGACCAAAATT
TAACAGTGCCATCCGAGGAAAGATTGGGTTGCCTCATAGCATCAAATTAAGCAGAAGACGTTCC
CGAAGCAAAAGTCCATTCAGGAAAGACAAGAGCCCTGTGAGGGAACCTATTGATAATCTCACTC
CTGAGGAAAGGGATGCAAGGACAGTTTTCTGCATGCAGCTGGCAGCAAGAATTCGACCAAGAGA
TTTGGAAGAATTTTTCTCTACAGTAGGAAAGGTTCGAGATGTGAGAATGATTTCTGATAGAAAT
TCAAGACGTTCCAAAGGAATCGCCTATGTGGAGTTTGTTGATGTCAGTTCAGTGCCTCTAGCAA
TTGGATTAACTGGTCAACGAGTTTTAGGAGTGCCAATCATAGTCCAGGCATCACAGGCAGAAAA
AAACAGAGCTGCTGCAATGGCGAACAATTTACAAAAGGGAAGTGCTGGACCTATGAGGCTCTAT
GTGGGATCATTACACTTTAACATAACTGAAGATATGCTTCGGGGAATCTTTGAACCTTTTGGAA
GGATTGAAAGTATTCAGCTCATGATGGATAGTGAAACCGGTCGATCTAAGGGATATGGATTCAT
TACCTTTTCTGACTCAGAATGTGCCAAAAAGGCTTTGGAACAGCTTAATGGATTCGAGTTAGCA
GGGAGACCAATGAAAGTTGGTCATGTTACTGAACGAACTGATGCATCTAGCGCTAGTTCATTTT
TGGACAGTGATGAATTAGAAAGGACTGGAATTGACTTGGGAACAACAGGTCGTCTCCAGTTGAT
GGCAAGACTTGCAGAGGGTACCGGTTTGCAGATTCCACCAGCAGCACAACAAGCTTTACAAATG
AGTGGCTCTCTGGCATTTGGTGCTGTGGCAGAATTCTCTTTTGTTATAGATTTGCAAACACGAC
TTTCCCAACAGACTGAAGCCTCAGCTTTAGCTGCAGCTGCGTCTGTTCAACCTCTTGCAACACA
GTGTTTCCAACTTTCTAACATGTTTAATCCTCAAACAGAAGAAGAAGTTGGATGGGATACAGAG
ATTAAAGATGATGTCATTGAAGAATGTAATAAACATGGTGGAGTCATTCATATTTATGTTGACA
AAAATTCAGCTCAGGGCAATGTGTATGTGAAGTGCCCATCGATTGCTGCGGCTATTGCTGCTGT
CAATGCGTTGCATGGCAGGTGGTTTGCTGGTAAAATGATAACAGCAGCGTATGTACCTCTTCCA
ACATACCACAACCTCTTTCCTGATTCCATGACAGCAACACAACTACTGGTTCCAAGTAGACGAT
GAAGGAGATGCAGTCCCTGATGTATATAGCTTTTTTTTCTCTTGAGAATTCATCTTGAGTTATC
TTTTATTTAGATAAAAAATAAAGAGGCAAGGGTCTACTGTCATTTGTATACAACTCCTGTTATC
TGGAAAAATAAAAATGTTAACAGGAATGCAGTGTGCTCATTCTCCCTAACTAGCAAATCCTACT
TTATGCAAAACTGTTCTCTTGTTCTGCTGTTTTAAATGTCCATGTAGAAAATTACATTAAGGAT
CTATAGAATAGCTCTAGGGGAACAAATGTGCTTTCTGTACAAAGGCAGACAGGTAATGTTTTAA
TGTTTCAGAAACTTAACTTTTTACACAGCAGTTACATTTCACATTCATGTATTCGGCTCATGGT
TCAGCAAAGGTTTCCAGAATACACTTTTGGAGTGTGAAAAGTCTAAGTTGCTAAATGGCTGCTT
AGCATTTGACCTTGACCATTTGGAAAGTGGGGGATTTCAAAATATTTCTTGATGGTAAATTTTT
CAATTACTGTATCTGTAAAAGTTTCTTTGTAAATACTATGTGTTTTAGTGTGTCTTAAGATTCC
AAACAAAATGATCCCTGCATTTCCTCAAGGTGGTTGATGTAACAGATTGAGTAAAACAGTCTTG
GGCAAGAGATAGGAAATGTGGAAATAGGTTTTGTCTGGTTGCATATAATCTTTGCTCTTTTTAA
GCTCTGTGAGCTCTGAAATATATTTTTGGGTTACTTCAGTGTGTTTGACAAGACAGCTTGATAT
TTCTATCAAACAAATGACTTTCATATTGCAACAATCTTTGTAAGAACCACTCAAATAAAATTCT
CTGAAAAAGGCCGCAAGAA

hide sequence

RefSeq Acc Id:

XM_006235332 ⟹ XP_006235394

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,123,087 - 165,156,453 (-)	NCBI
mRatBN7.2	3	144,663,004 - 144,696,218 (-)	NCBI
Rnor_6.0	3	151,691,498 - 151,724,721 (-)	NCBI
Rnor_5.0	3	158,056,123 - 158,089,351 (-)	NCBI

Sequence:

show sequence

ACCCCGGGTGTTTGTGTGTGTGTATGTGTTGGTGAATGTGAATACGGAGGAGCAGCGGCCGCCA
TTTCAGGGAGCTAGCCGACGCTGTCGCAGGGGTGGATCCTGAGCTGCCGAAGCCGCTGCCCTGC
TCTCCGTCGCGGGCTCCTTTAATCCCATTGTTTCTTTTAGATTCGTTTGGGCCTAGACGCCCTC
GGGGCCCGATATTCGGGTTGGGCGGTACCGCGGCCTGGGCCTAGTGACTTAACAGTAGCAACAG
CAGCGGCGGCGGCGGCAGCCGACTTCCCGATTCGAGCACAGGCGCGCGAAAATCCGCACAGGAC
TGTCTTGTTCTTCTTTAGGCGAGTAGAGAAAATGGCAGACGATATTGATATTGAAGCAATGCTT
GAGGCCCCTTACAAGAAGGATGAGAACAAGTTGAACAGTGCTAACGGCCATGAAGAACGTAGCA
AAAAGAGAAAAAAAAGCAAGAGCAGAAGCCGTAGTCATGAGAGAAAAAGAAGCAAAAGTAAAGA
ACGGAAACGAAGTAGAGATAGAGAAAGGAAAAAGAGCAAAAGTCGAGAGAGGAAACGAAGTAGA
AGCAAAGAAAGGAGACGAAGCCGCTCACGAAGTCGAGATAGAAGATTCCGAGGCCGCTACAGAA
GTCCCTACTCCGGACCAAAATTTAACAGTGCCATCCGAGGAAAGATTGGGTTGCCTCATAGCAT
CAAATTAAGCAGAAGACGTTCCCGAAGCAAAAGTCCATTCAGGAAAGACAAGAGCCCTGTGAGG
GAACCTATTGATAATCTCACTCCTGAGGAAAGGGATGCAAGGACAGTTTTCTGCATGCAGCTGG
CAGCAAGAATTCGACCAAGAGATTTGGAAGAATTTTTCTCTACAGTAGGAAAGGTTCGAGATGT
GAGAATGATTTCTGATAGAAATTCAAGACGTTCCAAAGGAATCGCCTATGTGGAGTTTGTTGAT
GTCAGTTCAGTGCCTCTAGCAATTGGATTAACTGGTCAACGAGTTTTAGGAGTGCCAATCATAG
TCCAGGCATCACAGGCAGAAAAAAACAGAGCTGCTGCAATGGCGAACAATTTACAAAAGGGAAG
TGCTGGACCTATGAGGCTCTATGTGGGATCATTACACTTTAACATAACTGAAGATATGCTTCGG
GGAATCTTTGAACCTTTTGGAAGGATTGAAAGTATTCAGCTCATGATGGATAGTGAAACCGGTC
GATCTAAGGGATATGGATTCATTACCTTTTCTGACTCAGAATGTGCCAAAAAGGCTTTGGAACA
GCTTAATGGATTCGAGTTAGCAGGGAGACCAATGAAAGTTGGTCATGTTACTGAACGAACTGAT
GCATCTAGCGCTAGTTCATTTTTGGACAGTGATGAATTAGAAAGGACTGGAATTGACTTGGGAA
CAACAGGTCGTCTCCAGTTGATGGCAAGACTTGCAGAGGGTACCGGTTTGCAGATTCCACCAGC
AGCACAACAAGCTTTACAAATGAGTGGCTCTCTGGCATTTGGTGCTGTGGCAGAATTCTCTTTT
GTTATAGATTTGCAAACACGACTTTCCCAACAGACTGAAGCCTCAGCTTTAGCTGCAGCTGCGT
CTGTTCAACCTCTTGCAACACAGTGTTTCCAACTTTCTAACATGTTTAATCCTCAAACAGAAGA
AGAAGTTGGATGGGATACAGAGATTAAAGATGATGTCATTGAAGAATGTAATAAACATGGTGGA
GTCATTCATATTTATGTTGACAAAAATTCAGCTCAGGGCAATGTGTATGTGAAGTGCCCATCGA
TTGCTGCGGCTATTGCTGCTGTCAATGCGTTGCATGGCAGGTGGTTTGCTGGTAAAATGATAAC
AGCAGCGTATGTACCTCTTCCAACATACCACAACCTCTTTCCTGATTCCATGACAGCAACACAA
CTACTGGTTCCAAGTAGACGATGAAGGAGATGCAGTCCCTGATGTATATAGCTTTTTTTTCTCT
TGAGAATTCATCTTGAGTTATCTTTTATTTAGATAAAAAATAAAGAGGCAAGGGTCTACTGTCA
TTTGTATACAACTCCTGTTATCTGGAAAAATAAAAATGTTAACAGGAATGCAGTGTGCTCATTC
TCCCTAACTAGCAAATCCTACTTTATGCAAAACTGTTCTCTTGTTCTGCTGTTTTAAATGTCCA
TGTAGAAAATTACATTAAGGATCTATAGAATAGCTCTAGGGGAACAAATGTGCTTTCTGTACAA
AGGCAGACAGGTAATGTTTTAATGTTTCAGAAACTTAACTTTTTACACAGCAGTTACATTTCAC
ATTCATGTATTCGGCTCATGGTTCAGCAAAGGTTTCCAGAATACACTTTTGGAGTGTGAAAAGT
CTAAGTTGCTAAATGGCTGCTTAGCATTTGACCTTGACCATTTGGAAAGTGGGGGATTTCAAAA
TATTTCTTGATGGTAAATTTTTCAATTACTGTATCTGTAAAAGTTTCTTTGTAAATACTATGTG
TTTTAGTGTGTCTTAAGATTCCAAACAAAATGATCCCTGCATTTCCTCAAGGTGGTTGATGTAA
CAGATTGAGTAAAACAGTCTTGGGCAAGAGATAGGAAATGTGGAAATAGGTTTTGTCTGGTTGC
ATATAATCTTTGCTCTTTTTAAGCTCTGTGAGCTCTGAAATATATTTTTGGGTTACTTCAGTGT
GTTTGACAAGACAGCTTGATATTTCTATCAAACAAATGACTTTCATATTGCAACAATCTTTGTA
AGAACCACTCAAATAAAATTCTCTGAAAAAGGCCGCAAGAA

hide sequence

RefSeq Acc Id:

XM_008762349 ⟹ XP_008760571

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,123,087 - 165,156,453 (-)	NCBI
mRatBN7.2	3	144,662,998 - 144,696,221 (-)	NCBI
Rnor_6.0	3	151,691,498 - 151,724,723 (-)	NCBI

Sequence:

show sequence

AGACCCCGGGTGTTTGTGTGTGTGTATGTGTTGGTGAATGTGAATACGGAGGAGCAGCGGCCGC
CATTTCAGGGAGCTAGCCGACGCTGTCGCAGGGGTGGATCCTGAGCTGCCGAAGCCGCTGCCCT
GCTCTCCGTCGCGGGCTCCTTTAATCCCATTGTTTCTTTTAGATTCGTTTGGGCCTAGACGCCC
TCGGGGCCCGATATTCGGGTTGGGCGGTACCGCGGCCTGGGCCTAGTGACTTAACAGTAGCAAC
AGCAGCGGCGGCGGCGGCAGCCGACTTCCCGATTCGAGCACAGGCGCGCGAAAATCCGCACAGG
CGAGTAGAGAAAATGGCAGACGATATTGATATTGAAGCAATGCTTGAGGCCCCTTACAAGAAGG
ATGAGAACAAGTTGAACAGTGCTAACGGCCATGAAGAACGTAGCAAAAAGAGAAAAAAAAGCAA
GAGCAGAAGCCGTAGTCATGAGAGAAAAAGAAGCAAAAGTAAAGAACGGAAACGAAGTAGAGAT
AGAGAAAGGAAAAAGAGCAAAAGTCGAGAGAGGAAACGAAGTAGAAGCAAAGAAAGGAGACGAA
GCCGCTCACGAAGTCGAGATAGAAGATTCCGAGGCCGCTACAGAAGTCCCTACAGAAGACGTTC
CCGAAGCAAAAGTCCATTCAGGAAAGACAAGAGCCCTGTGAGGGAACCTATTGATAATCTCACT
CCTGAGGAAAGGGATGCAAGGACAGTTTTCTGCATGCAGCTGGCAGCAAGAATTCGACCAAGAG
ATTTGGAAGAATTTTTCTCTACAGTAGGAAAGGTTCGAGATGTGAGAATGATTTCTGATAGAAA
TTCAAGACGTTCCAAAGGAATCGCCTATGTGGAGTTTGTTGATGTCAGTTCAGTGCCTCTAGCA
ATTGGATTAACTGGTCAACGAGTTTTAGGAGTGCCAATCATAGTCCAGGCATCACAGGCAGAAA
AAAACAGAGCTGCTGCAATGGCGAACAATTTACAAAAGGGAAGTGCTGGACCTATGAGGCTCTA
TGTGGGATCATTACACTTTAACATAACTGAAGATATGCTTCGGGGAATCTTTGAACCTTTTGGA
AGGATTGAAAGTATTCAGCTCATGATGGATAGTGAAACCGGTCGATCTAAGGGATATGGATTCA
TTACCTTTTCTGACTCAGAATGTGCCAAAAAGGCTTTGGAACAGCTTAATGGATTCGAGTTAGC
AGGGAGACCAATGAAAGTTGGTCATGTTACTGAACGAACTGATGCATCTAGCGCTAGTTCATTT
TTGGACAGTGATGAATTAGAAAGGACTGGAATTGACTTGGGAACAACAGGTCGTCTCCAGTTGA
TGGCAAGACTTGCAGAGGGTACCGGTTTGCAGATTCCACCAGCAGCACAACAAGCTTTACAAAT
GAGTGGCTCTCTGGCATTTGGTGCTGTGGCAGAATTCTCTTTTGTTATAGATTTGCAAACACGA
CTTTCCCAACAGACTGAAGCCTCAGCTTTAGCTGCAGCTGCGTCTGTTCAACCTCTTGCAACAC
AGTGTTTCCAACTTTCTAACATGTTTAATCCTCAAACAGAAGAAGAAGTTGGATGGGATACAGA
GATTAAAGATGATGTCATTGAAGAATGTAATAAACATGGTGGAGTCATTCATATTTATGTTGAC
AAAAATTCAGCTCAGGGCAATGTGTATGTGAAGTGCCCATCGATTGCTGCGGCTATTGCTGCTG
TCAATGCGTTGCATGGCAGGTGGTTTGCTGGTAAAATGATAACAGCAGCGTATGTACCTCTTCC
AACATACCACAACCTCTTTCCTGATTCCATGACAGCAACACAACTACTGGTTCCAAGTAGACGA
TGAAGGAGATGCAGTCCCTGATGTATATAGCTTTTTTTTCTCTTGAGAATTCATCTTGAGTTAT
CTTTTATTTAGATAAAAAATAAAGAGGCAAGGGTCTACTGTCATTTGTATACAACTCCTGTTAT
CTGGAAAAATAAAAATGTTAACAGGAATGCAGTGTGCTCATTCTCCCTAACTAGCAAATCCTAC
TTTATGCAAAACTGTTCTCTTGTTCTGCTGTTTTAAATGTCCATGTAGAAAATTACATTAAGGA
TCTATAGAATAGCTCTAGGGGAACAAATGTGCTTTCTGTACAAAGGCAGACAGGTAATGTTTTA
ATGTTTCAGAAACTTAACTTTTTACACAGCAGTTACATTTCACATTCATGTATTCGGCTCATGG
TTCAGCAAAGGTTTCCAGAATACACTTTTGGAGTGTGAAAAGTCTAAGTTGCTAAATGGCTGCT
TAGCATTTGACCTTGACCATTTGGAAAGTGGGGGATTTCAAAATATTTCTTGATGGTAAATTTT
TCAATTACTGTATCTGTAAAAGTTTCTTTGTAAATACTATGTGTTTTAGTGTGTCTTAAGATTC
CAAACAAAATGATCCCTGCATTTCCTCAAGGTGGTTGATGTAACAGATTGAGTAAAACAGTCTT
GGGCAAGAGATAGGAAATGTGGAAATAGGTTTTGTCTGGTTGCATATAATCTTTGCTCTTTTTA
AGCTCTGTGAGCTCTGAAATATATTTTTGGGTTACTTCAGTGTGTTTGACAAGACAGCTTGATA
TTTCTATCAAACAAATGACTTTCATATTGCAACAATCTTTGTAAGAACCACTCAAATAAAATTC
TCTGAAAAAGGCCGCAAGAA

hide sequence

RefSeq Acc Id:

XM_008762350 ⟹ XP_008760572

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,123,087 - 165,156,453 (-)	NCBI
mRatBN7.2	3	144,662,998 - 144,696,222 (-)	NCBI
Rnor_6.0	3	151,691,498 - 151,724,723 (-)	NCBI

Sequence:

show sequence

AGACCCCGGGTGTTTGTGTGTGTGTATGTGTTGGTGAATGTGAATACGGAGGAGCAGCGGCCGC
CATTTCAGGGAGCTAGCCGACGCTGTCGCAGGGGTGGATCCTGAGCTGCCGAAGCCGCTGCCCT
GCTCTCCGTCGCGGGCTCCTTTAATCCCATTGTTTCTTTTAGATTCGTTTGGGCCTAGACGCCC
TCGGGGCCCGATATTCGGGTTGGGCGGTACCGCGGCCTGGGCCTAGTGACTTAACAGTAGCAAC
AGCAGCGGCGGCGGCGGCAGCCGACTTCCCGATTCGAGCACAGGCGCGCGAAAATCCGCACAGG
ACTGTCTTGTTCTTCTTTAGGCGAGTAGAGAAAATGGCAGACGATATTGATATTGAAGCAATGC
TTGAGGCCCCTTACAAGAAGGATGAGAACAAGTTGAACAGTGCTAACGGCCATGAAGAACGTAG
CAAAAAGAGAAAAAAAAGCAAGAGCAGAAGCCGTAGTCATGAGAGAAAAAGAAGCAAAAGTAAA
GAACGGAAACGAAGTAGAGATAGAGAAAGGAAAAAGAGCAAAAGTCGAGAGAGGAAACGAAGTA
GAAGCAAAGAAAGGAGACGAAGCCGCTCACGAAGTCGAGATAGAAGATTCCGAGGCCGCTACAG
AAGTCCCTACAGAAGACGTTCCCGAAGCAAAAGTCCATTCAGGAAAGACAAGAGCCCTGTGAGG
GAACCTATTGATAATCTCACTCCTGAGGAAAGGGATGCAAGGACAGTTTTCTGCATGCAGCTGG
CAGCAAGAATTCGACCAAGAGATTTGGAAGAATTTTTCTCTACAGTAGGAAAGGTTCGAGATGT
GAGAATGATTTCTGATAGAAATTCAAGACGTTCCAAAGGAATCGCCTATGTGGAGTTTGTTGAT
GTCAGTTCAGTGCCTCTAGCAATTGGATTAACTGGTCAACGAGTTTTAGGAGTGCCAATCATAG
TCCAGGCATCACAGGCAGAAAAAAACAGAGCTGCTGCAATGGCGAACAATTTACAAAAGGGAAG
TGCTGGACCTATGAGGCTCTATGTGGGATCATTACACTTTAACATAACTGAAGATATGCTTCGG
GGAATCTTTGAACCTTTTGGAAGGATTGAAAGTATTCAGCTCATGATGGATAGTGAAACCGGTC
GATCTAAGGGATATGGATTCATTACCTTTTCTGACTCAGAATGTGCCAAAAAGGCTTTGGAACA
GCTTAATGGATTCGAGTTAGCAGGGAGACCAATGAAAGTTGGTCATGTTACTGAACGAACTGAT
GCATCTAGCGCTAGTTCATTTTTGGACAGTGATGAATTAGAAAGGACTGGAATTGACTTGGGAA
CAACAGGTCGTCTCCAGTTGATGGCAAGACTTGCAGAGGGTACCGGTTTGCAGATTCCACCAGC
AGCACAACAAGCTTTACAAATGAGTGGCTCTCTGGCATTTGGTGCTGTGGCAGAATTCTCTTTT
GTTATAGATTTGCAAACACGACTTTCCCAACAGACTGAAGCCTCAGCTTTAGCTGCAGCTGCGT
CTGTTCAACCTCTTGCAACACAGTGTTTCCAACTTTCTAACATGTTTAATCCTCAAACAGAAGA
AGAAGTTGGATGGGATACAGAGATTAAAGATGATGTCATTGAAGAATGTAATAAACATGGTGGA
GTCATTCATATTTATGTTGACAAAAATTCAGCTCAGGGCAATGTGTATGTGAAGTGCCCATCGA
TTGCTGCGGCTATTGCTGCTGTCAATGCGTTGCATGGCAGGTGGTTTGCTGGTAAAATGATAAC
AGCAGCGTATGTACCTCTTCCAACATACCACAACCTCTTTCCTGATTCCATGACAGCAACACAA
CTACTGGTTCCAAGTAGACGATGAAGGAGATGCAGTCCCTGATGTATATAGCTTTTTTTTCTCT
TGAGAATTCATCTTGAGTTATCTTTTATTTAGATAAAAAATAAAGAGGCAAGGGTCTACTGTCA
TTTGTATACAACTCCTGTTATCTGGAAAAATAAAAATGTTAACAGGAATGCAGTGTGCTCATTC
TCCCTAACTAGCAAATCCTACTTTATGCAAAACTGTTCTCTTGTTCTGCTGTTTTAAATGTCCA
TGTAGAAAATTACATTAAGGATCTATAGAATAGCTCTAGGGGAACAAATGTGCTTTCTGTACAA
AGGCAGACAGGTAATGTTTTAATGTTTCAGAAACTTAACTTTTTACACAGCAGTTACATTTCAC
ATTCATGTATTCGGCTCATGGTTCAGCAAAGGTTTCCAGAATACACTTTTGGAGTGTGAAAAGT
CTAAGTTGCTAAATGGCTGCTTAGCATTTGACCTTGACCATTTGGAAAGTGGGGGATTTCAAAA
TATTTCTTGATGGTAAATTTTTCAATTACTGTATCTGTAAAAGTTTCTTTGTAAATACTATGTG
TTTTAGTGTGTCTTAAGATTCCAAACAAAATGATCCCTGCATTTCCTCAAGGTGGTTGATGTAA
CAGATTGAGTAAAACAGTCTTGGGCAAGAGATAGGAAATGTGGAAATAGGTTTTGTCTGGTTGC
ATATAATCTTTGCTCTTTTTAAGCTCTGTGAGCTCTGAAATATATTTTTGGGTTACTTCAGTGT
GTTTGACAAGACAGCTTGATATTTCTATCAAACAAATGACTTTCATATTGCAACAATCTTTGTA
AGAACCACTCAAATAAAATTCTCTGAAAAAGGCCGCAAGAA

hide sequence

RefSeq Acc Id:

XM_008762356 ⟹ XP_008760578

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,123,087 - 165,156,453 (-)	NCBI
mRatBN7.2	3	144,663,004 - 144,696,222 (-)	NCBI
Rnor_6.0	3	151,691,498 - 151,724,723 (-)	NCBI

Sequence:

show sequence

AGACCCCGGGTGTTTGTGTGTGTGTATGTGTTGGTGAATGTGAATACGGAGGAGCAGCGGCCGC
CATTTCAGGGAGCTAGCCGACGCTGTCGCAGGGGTGGATCCTGAGCTGCCGAAGCCGCTGCCCT
GCTCTCCGTCGCGGGCTCCTTTAATCCCATTGTTTCTTTTAGATTCGTTTGGGCCTAGACGCCC
TCGGGGCCCGATATTCGGGTTGGGCGGTACCGCGGCCTGGGCCTAGTGACTTAACAGTAGCAAC
AGCAGCGGCGGCGGCGGCAGCCGACTTCCCGATTCGAGCACAGGCGCGCGAAAATCCGCACAGG
CGAGTAGAGAAAATGGCAGACGATATTGATATTGAAGCAATGCTTGAGGCCCCTTACAAGAAGG
ATGAGAACAAGTTGAACAGTGCTAACGGCCATGAAGAACGTAGCAAAAAGAGAAAAAAAAGCAA
GAGCAGAAGCCGTAGTCATGAGAGAAAAAGAAGCAAAAGTAAAGAACGGAAACGAAGTAGAGAT
AGAGAAAGGAAAAAGAGCAAAAGTCGAGAGAGGAAACGAAGTAGAAGCAAAGAAAGGAGACGAA
GCCGCTCACGAAGTCGAGATAGAAGATTCCGAGGCCGCTACAGAAGTCCCTACAGAAGACGTTC
CCGAAGCAAAAGTCCATTCAGGAAAGACAAGAGCCCTGTGAGGGAACCTATTGATAATCTCACT
CCTGAGGAAAGGGATGCAAGGACAGTTTTCTGCATGCAGCTGGCAGCAAGAATTCGACCAAGAG
ATTTGGAAGAATTTTTCTCTACAGTAGGAAAGGTTCGAGATGTGAGAATGATTTCTGATAGAAA
TTCAAGACGTTCCAAAGGAATCGCCTATGTGGAGTTTGTTGATGTCAGTTCAGTGCCTCTAGCA
ATTGGATTAACTGGTCAACGAGTTTTAGGAGTGCCAATCATAGTCCAGGCATCACAGGCAGAAA
AAAACAGAGCTGCTGCAATGGCGAACAATTTACAAAAGGGAAGTGCTGGACCTATGAGGCTCTA
TGTGGGATCATTACACTTTAACATAACTGAAGATATGCTTCGGGGAATCTTTGAACCTTTTGGA
AGGATTGAAAGTATTCAGCTCATGATGGATAGTGAAACCGGTCGATCTAAGGGATATGGATTCA
TTACCTTTTCTGACTCAGAATGTGCCAAAAAGGCTTTGGAACAGCTTAATGGATTCGAGTTAGC
AGGGAGACCAATGAAAGTTGGTCATGTTACTGAACGAACTGATGCATCTAGCGCTAGTTCATTT
TTGGACAGTGATGAATTAGAAAGGACTGGAATTGACTTGGGAACAACAGGTCGTCTCCAGTTGA
TGGCAAGACTTGCAGAGGGTACCGGTTTGCAGATTCCACCAGCAGCACAACAAGCTTTACAAAT
GAGTGGCTCTCTGGCATTTGGTGCTGTGGCAGATTTGCAAACACGACTTTCCCAACAGACTGAA
GCCTCAGCTTTAGCTGCAGCTGCGTCTGTTCAACCTCTTGCAACACAGTGTTTCCAACTTTCTA
ACATGTTTAATCCTCAAACAGAAGAAGAAGTTGGATGGGATACAGAGATTAAAGATGATGTCAT
TGAAGAATGTAATAAACATGGTGGAGTCATTCATATTTATGTTGACAAAAATTCAGCTCAGGGC
AATGTGTATGTGAAGTGCCCATCGATTGCTGCGGCTATTGCTGCTGTCAATGCGTTGCATGGCA
GGTGGTTTGCTGGTAAAATGATAACAGCAGCGTATGTACCTCTTCCAACATACCACAACCTCTT
TCCTGATTCCATGACAGCAACACAACTACTGGTTCCAAGTAGACGATGAAGGAGATGCAGTCCC
TGATGTATATAGCTTTTTTTTCTCTTGAGAATTCATCTTGAGTTATCTTTTATTTAGATAAAAA
ATAAAGAGGCAAGGGTCTACTGTCATTTGTATACAACTCCTGTTATCTGGAAAAATAAAAATGT
TAACAGGAATGCAGTGTGCTCATTCTCCCTAACTAGCAAATCCTACTTTATGCAAAACTGTTCT
CTTGTTCTGCTGTTTTAAATGTCCATGTAGAAAATTACATTAAGGATCTATAGAATAGCTCTAG
GGGAACAAATGTGCTTTCTGTACAAAGGCAGACAGGTAATGTTTTAATGTTTCAGAAACTTAAC
TTTTTACACAGCAGTTACATTTCACATTCATGTATTCGGCTCATGGTTCAGCAAAGGTTTCCAG
AATACACTTTTGGAGTGTGAAAAGTCTAAGTTGCTAAATGGCTGCTTAGCATTTGACCTTGACC
ATTTGGAAAGTGGGGGATTTCAAAATATTTCTTGATGGTAAATTTTTCAATTACTGTATCTGTA
AAAGTTTCTTTGTAAATACTATGTGTTTTAGTGTGTCTTAAGATTCCAAACAAAATGATCCCTG
CATTTCCTCAAGGTGGTTGATGTAACAGATTGAGTAAAACAGTCTTGGGCAAGAGATAGGAAAT
GTGGAAATAGGTTTTGTCTGGTTGCATATAATCTTTGCTCTTTTTAAGCTCTGTGAGCTCTGAA
ATATATTTTTGGGTTACTTCAGTGTGTTTGACAAGACAGCTTGATATTTCTATCAAACAAATGA
CTTTCATATTGCAACAATCTTTGTAAGAACCACTCAAATAAAATTCTCTGAAAAAGGCCGCAAG
AA

hide sequence

RefSeq Acc Id:

XM_039105498 ⟹ XP_038961426

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,123,087 - 165,156,453 (-)	NCBI
mRatBN7.2	3	144,662,998 - 144,696,217 (-)	NCBI

RefSeq Acc Id:

XM_063284180 ⟹ XP_063140250

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,123,087 - 165,156,453 (-)	NCBI

RefSeq Acc Id:

XM_063284181 ⟹ XP_063140251

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,123,087 - 165,155,349 (-)	NCBI

RefSeq Acc Id:

XM_063284182 ⟹ XP_063140252

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,123,087 - 165,156,453 (-)	NCBI

RefSeq Acc Id:

XM_063284183 ⟹ XP_063140253

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,123,087 - 165,152,608 (-)	NCBI

RefSeq Acc Id:

XM_063284184 ⟹ XP_063140254

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,123,087 - 165,155,349 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001013225	(Get FASTA)	NCBI Sequence Viewer
	XP_006235393	(Get FASTA)	NCBI Sequence Viewer
	XP_006235394	(Get FASTA)	NCBI Sequence Viewer
	XP_008760571	(Get FASTA)	NCBI Sequence Viewer
	XP_008760572	(Get FASTA)	NCBI Sequence Viewer
	XP_008760578	(Get FASTA)	NCBI Sequence Viewer
	XP_038961426	(Get FASTA)	NCBI Sequence Viewer
	XP_063140250	(Get FASTA)	NCBI Sequence Viewer
	XP_063140251	(Get FASTA)	NCBI Sequence Viewer
	XP_063140252	(Get FASTA)	NCBI Sequence Viewer
	XP_063140253	(Get FASTA)	NCBI Sequence Viewer
	XP_063140254	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH91394	(Get FASTA)	NCBI Sequence Viewer
	EDL85855	(Get FASTA)	NCBI Sequence Viewer
	EDL85856	(Get FASTA)	NCBI Sequence Viewer
	EDL85857	(Get FASTA)	NCBI Sequence Viewer
	EDL85858	(Get FASTA)	NCBI Sequence Viewer
	EDL85859	(Get FASTA)	NCBI Sequence Viewer
	EDL85860	(Get FASTA)	NCBI Sequence Viewer
	EDL85861	(Get FASTA)	NCBI Sequence Viewer
	EDL85862	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000026964
	ENSRNOP00000026964.7
	ENSRNOP00000094754.1

RefSeq Acc Id:

NP_001013225 ⟸ NM_001013207

- UniProtKB:

Q5BJP4 (UniProtKB/TrEMBL), F1MA64 (UniProtKB/TrEMBL), D3ZR20 (UniProtKB/TrEMBL), A0A8J8XIU1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MADDIDIEAMLEAPYKKDENKLNSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRDRERK
KSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSK
SPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR
SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGS
LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRP
MKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGS
LAFGAVADLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEEC
NKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDS
MTATQLLVPSRR

hide sequence

RefSeq Acc Id:	XP_006235393 ⟸ XM_006235331
- Peptide Label:	isoform X1
- UniProtKB:	A0A8J8XIU8 (UniProtKB/TrEMBL), A0A8J8XIU1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADDIDIEAMLEAPYKKDENKLNSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRDRERK KSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSK SPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGS LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRP MKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGS LAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKD DVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYH NLFPDSMTATQLLVPSRR hide sequence

RefSeq Acc Id:	XP_006235394 ⟸ XM_006235332
- Peptide Label:	isoform X1
- UniProtKB:	A0A8J8XIU8 (UniProtKB/TrEMBL), A0A8J8XIU1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADDIDIEAMLEAPYKKDENKLNSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRDRERK KSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSK SPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGS LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRP MKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGS LAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKD DVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYH NLFPDSMTATQLLVPSRR hide sequence

RefSeq Acc Id:

XP_008760578 ⟸ XM_008762356

- Peptide Label:

isoform X5

- Sequence:

show sequence

MADDIDIEAMLEAPYKKDENKLNSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRDRERK
KSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYRRRSRSKSPFRKDKSPVREPIDNLTPEER
DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLT
GQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIES
IQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSD
ELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASAL
AAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYV
KCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR

hide sequence

RefSeq Acc Id:

XP_008760571 ⟸ XM_008762349

- Peptide Label:

isoform X3

- Sequence:

show sequence

MADDIDIEAMLEAPYKKDENKLNSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRDRERK
KSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYRRRSRSKSPFRKDKSPVREPIDNLTPEER
DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLT
GQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIES
IQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSD
ELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQ
TEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSA
QGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR

hide sequence

RefSeq Acc Id:

XP_008760572 ⟸ XM_008762350

- Peptide Label:

isoform X3

- Sequence:

show sequence

MADDIDIEAMLEAPYKKDENKLNSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRDRERK
KSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYRRRSRSKSPFRKDKSPVREPIDNLTPEER
DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLT
GQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIES
IQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSD
ELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQ
TEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSA
QGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR

hide sequence

RefSeq Acc Id:	XP_038961426 ⟸ XM_039105498
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6A8P3 (UniProtKB/TrEMBL), A0A8J8XIU1 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000026964 ⟸ ENSRNOT00000026964

Ensembl Acc Id:

ENSRNOP00000060273 ⟸ ENSRNOT00000065729

Ensembl Acc Id:

ENSRNOP00000089286 ⟸ ENSRNOT00000112953

Ensembl Acc Id:

ENSRNOP00000094754 ⟸ ENSRNOT00000111677

Ensembl Acc Id:

ENSRNOP00000090119 ⟸ ENSRNOT00000117296

RefSeq Acc Id:	XP_063140252 ⟸ XM_063284182
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063140250 ⟸ XM_063284180
- Peptide Label:	isoform X2
- UniProtKB:	D3ZR20 (UniProtKB/TrEMBL), F1MA64 (UniProtKB/TrEMBL), Q5BJP4 (UniProtKB/TrEMBL), A0A8J8XIU1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140254 ⟸ XM_063284184
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063140251 ⟸ XM_063284181
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6A8P3 (UniProtKB/TrEMBL), A0A8J8XIU1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140253 ⟸ XM_063284183
- Peptide Label:	isoform X6

Protein Domains

RRM

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5BJP4-F1-model_v2	AlphaFold	Q5BJP4	1-524	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692595

Promoter ID:

EPDNEW_R3120

Type:

initiation region

Name:

LOC100910882_1

Description:

RNA-binding protein 39-like

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	151,724,661 - 151,724,721	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310071	AgrOrtholog
BioCyc Gene	G2FUF-47102	BioCyc
Ensembl Genes	ENSRNOG00000019848	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSRNOG00000049814	Ensembl
	ENSRNOG00000088955	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000026964	ENTREZGENE
	ENSRNOT00000026964.9	UniProtKB/TrEMBL
	ENSRNOT00000111677.2	UniProtKB/TrEMBL
Gene3D-CATH	3.30.70.330	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7096440	IMAGE-MGC_LOAD
	IMAGE:7322533	IMAGE-MGC_LOAD
InterPro	CC1_SF	UniProtKB/TrEMBL
	Nucleotide-bd_a/b_plait_sf	UniProtKB/TrEMBL
	RBD_domain_sf	UniProtKB/TrEMBL
	RBM39_linker	UniProtKB/TrEMBL
	RRM_dom	UniProtKB/TrEMBL
	RRM_dom_euk	UniProtKB/TrEMBL
KEGG Report	rno:362251	UniProtKB/TrEMBL
MGC_CLONE	MGC:109490	IMAGE-MGC_LOAD
	MGC:93693	IMAGE-MGC_LOAD
NCBI Gene	362251	ENTREZGENE
PANTHER	SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED	UniProtKB/TrEMBL
Pfam	RBM39linker	UniProtKB/TrEMBL
	RRM_1	UniProtKB/TrEMBL
PhenoGen	Rbm39	PhenoGen
PROSITE	RRM	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000019848	RatGTEx
	ENSRNOG00000049814	RatGTEx
	ENSRNOG00000088955	RatGTEx
SMART	RRM	UniProtKB/TrEMBL
	RRM_1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54928	UniProtKB/TrEMBL
UniProt	A0A8I6A8P3	ENTREZGENE
	A0A8I6B1G7_RAT	UniProtKB/TrEMBL
	A0A8J8XIU1	ENTREZGENE
	A0A8J8XIU8	ENTREZGENE, UniProtKB/TrEMBL
	A6KI94_RAT	UniProtKB/TrEMBL
	D3ZR20	ENTREZGENE
	F1MA64	ENTREZGENE
	Q5BJP4	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	D3ZR20	UniProtKB/TrEMBL
	F1MA64	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Rbm39	RNA binding motif protein 39	LOC100910882	RNA-binding protein 39-like	Data merged from RGD:6496028	737654	PROVISIONAL
2012-07-05	LOC100910882	RNA-binding protein 39-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-03-07	Rbm39	RNA binding motif protein 39	Rnpc2	RNA-binding region (RNP1, RRM) containing 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	Rnpc2	RNA-binding region (RNP1, RRM) containing 2	Rnpc2_predicted	RNA-binding region (RNP1, RRM) containing 2 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Rnpc2_predicted	RNA-binding region (RNP1, RRM) containing 2 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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