Hnrnph3 (heterogeneous nuclear ribonucleoprotein H3) - Rat Genome Database

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Gene: Hnrnph3 (heterogeneous nuclear ribonucleoprotein H3) Rattus norvegicus
Analyze
Symbol: Hnrnph3
Name: heterogeneous nuclear ribonucleoprotein H3
RGD ID: 1310019
Description: Predicted to enable RNA binding activity. Predicted to be involved in epithelial cell differentiation and regulation of RNA splicing. Predicted to be located in nucleus. Predicted to be part of ribonucleoprotein complex. Predicted to be active in nucleoplasm. Orthologous to human HNRNPH3 (heterogeneous nuclear ribonucleoprotein H3); PARTICIPATES IN spliceosome pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; atrazine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: heterogeneous nuclear ribonucleoprotein H3 (2H9); heterogeneous nuclear ribonucleoprotein H3-like; Hnrph3; LOC100910795; LOC361838
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82025,619,540 - 25,624,397 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2025,615,577 - 25,625,162 (+)EnsemblGRCr8
mRatBN7.22025,616,400 - 25,625,814 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2025,614,733 - 25,625,750 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2026,314,332 - 26,319,189 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02025,667,362 - 25,672,219 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02026,253,383 - 26,258,240 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02027,167,926 - 27,178,172 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2027,169,267 - 27,216,941 (+)Ensemblrn6Rnor6.0
Rnor_5.02029,008,607 - 29,019,348 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42025,353,281 - 25,358,138 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2026,916,611 - 26,921,468 (+)NCBICelera
RGSC_v3.12025,367,895 - 25,374,465 (-)NCBI
Cytogenetic Map20q11NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(S)-amphetamine  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dimethoxyphenol  (ISO)
3,3',5-triiodo-L-thyronine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
aristolochic acid A  (ISO)
atrazine  (EXP)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
bisphenol F  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
chlorpyrifos  (ISO)
cisplatin  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (ISO)
dimethyl sulfoxide  (ISO)
diuron  (EXP)
dorsomorphin  (ISO)
endosulfan  (EXP)
enzyme inhibitor  (ISO)
FR900359  (ISO)
furfural  (ISO)
gentamycin  (EXP)
hydrogen peroxide  (ISO)
indometacin  (ISO)
isoprenaline  (ISO)
ivermectin  (ISO)
ketamine  (EXP)
leflunomide  (ISO)
mercury atom  (ISO)
mercury(0)  (ISO)
methyl methanesulfonate  (ISO)
methylparaben  (ISO)
nonanoic acid  (ISO)
paracetamol  (EXP,ISO)
phenylmercury acetate  (ISO)
quercetin  (ISO)
resorcinol  (ISO)
resveratrol  (ISO)
rotenone  (EXP)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (EXP,ISO)
sodium chloride  (ISO)
sodium fluoride  (ISO)
succimer  (ISO)
tamoxifen  (ISO)
theophylline  (ISO)
thiram  (ISO)
titanium dioxide  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleoplasm  (IBA,IEA,ISO)
nucleus  (IEA,ISO)
ribonucleoprotein complex  (IBA,IEA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:18573884   PMID:21492153   PMID:22658674   PMID:22681889   PMID:22720776   PMID:25002582   PMID:31505169  


Genomics

Comparative Map Data
Hnrnph3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82025,619,540 - 25,624,397 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2025,615,577 - 25,625,162 (+)EnsemblGRCr8
mRatBN7.22025,616,400 - 25,625,814 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2025,614,733 - 25,625,750 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2026,314,332 - 26,319,189 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02025,667,362 - 25,672,219 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02026,253,383 - 26,258,240 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02027,167,926 - 27,178,172 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2027,169,267 - 27,216,941 (+)Ensemblrn6Rnor6.0
Rnor_5.02029,008,607 - 29,019,348 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42025,353,281 - 25,358,138 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2026,916,611 - 26,921,468 (+)NCBICelera
RGSC_v3.12025,367,895 - 25,374,465 (-)NCBI
Cytogenetic Map20q11NCBI
HNRNPH3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381068,331,693 - 68,343,196 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1068,331,174 - 68,344,002 (+)Ensemblhg38GRCh38
GRCh371070,091,450 - 70,102,953 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361069,761,885 - 69,772,954 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341069,761,884 - 69,772,952NCBI
Celera1063,366,370 - 63,377,556 (+)NCBICelera
Cytogenetic Map10q21.3NCBI
HuRef1064,092,027 - 64,103,215 (+)NCBIHuRef
CHM1_11070,373,559 - 70,384,744 (+)NCBICHM1_1
T2T-CHM13v2.01069,200,902 - 69,212,407 (+)NCBIT2T-CHM13v2.0
Hnrnph3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391062,850,443 - 62,859,764 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1062,850,443 - 62,859,996 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381063,014,664 - 63,023,980 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1063,014,664 - 63,024,217 (-)Ensemblmm10GRCm38
MGSCv371062,477,412 - 62,486,597 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361062,410,021 - 62,414,861 (-)NCBIMGSCv36mm8
Celera1064,115,988 - 64,125,172 (-)NCBICelera
Cytogenetic Map10B4NCBI
cM Map1032.52NCBI
Hnrnph3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542520,619,291 - 20,631,915 (+)Ensembl
ChiLan1.0NW_00495542520,619,212 - 20,631,915 (+)NCBIChiLan1.0ChiLan1.0
HNRNPH3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2880,495,276 - 80,506,419 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11080,500,596 - 80,511,738 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01064,816,143 - 64,827,354 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11067,126,062 - 67,137,270 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1067,126,067 - 67,137,267 (+)EnsemblpanPan2panpan1.1
HNRNPH3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1419,558,685 - 19,569,874 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl419,558,736 - 19,568,885 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha419,691,063 - 19,702,246 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0419,828,837 - 19,840,060 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl419,828,897 - 19,840,053 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1419,711,016 - 19,722,186 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0419,933,161 - 19,944,331 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0420,276,418 - 20,287,609 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Hnrnph3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721361,441,547 - 61,452,410 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365219,934,269 - 9,945,832 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365219,934,272 - 9,945,154 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HNRNPH3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1471,486,255 - 71,497,381 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11471,485,925 - 71,498,356 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21477,530,296 - 77,547,846 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HNRNPH3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1963,052,937 - 63,064,157 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl963,054,083 - 63,058,759 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604823,819,939 - 23,830,746 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hnrnph3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247542,696,464 - 2,709,280 (+)NCBIHetGla 1.0HetGla 1.0hetGla2

Variants

.
Variants in Hnrnph3
6 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:555
Count of miRNA genes:264
Interacting mature miRNAs:312
Transcripts:ENSRNOT00000032600, ENSRNOT00000073617
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4889610Pancm3Pancreatic morphology QTL 33.750.001pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)20418947649189476Rat
2317057Aia27Adjuvant induced arthritis QTL 272.83joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)20126925056Rat
1641915Colcr9Colorectal carcinoma resistance QTL 92.970.0024intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)20133724594Rat
7387283Uae44Urinary albumin excretion QTL 440.1712urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)20126128279Rat
4889870Pur30Proteinuria QTL 30190.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20804392029865039Rat
7411668Foco32Food consumption QTL 3280.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20136600300Rat
2305926Iddm37Insulin dependent diabetes mellitus QTL 376blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)20153308346533083Rat
1558640Prcs2Prostate cancer susceptibility QTL 23.3prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)20134066551Rat
8694189Bw153Body weight QTL 1533.130.001body mass (VT:0001259)body weight gain (CMO:0000420)20129193376Rat
2303626Vencon10Ventilatory control QTL 100.001respiration trait (VT:0001943)respiration rate (CMO:0000289)202074558556021148Rat
4889857Pur27Proteinuria QTL 2712.20.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20127341128Rat
1598870Bp289Blood pressure QTL 2892.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)20821635953216359Rat
9590109Sffal8Serum free fatty acids level QTL 85.320.01blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)20129193376Rat
9589155Insul32Insulin level QTL 326.380.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)20129193376Rat
9590275Scort15Serum corticosterone level QTL 153.480.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20129193376Rat
1598858Cm61Cardiac mass QTL 613.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)20821635953216359Rat
7411650Foco23Food consumption QTL 2320.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20129193376Rat
2317851Alcrsp22Alcohol response QTL 223.20.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127341128Rat
1598816Memor12Memory QTL 122.4exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)201224324249189476Rat
1641893Alcrsp7Alcohol response QTL 7response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127341128Rat
6893685Bw111Body weight QTL 1112.70.004body mass (VT:0001259)body weight (CMO:0000012)20132578510Rat
9590252Scort12Serum corticosterone level QTL 1220.460.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20136600300Rat

Markers in Region
RH131898  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22025,625,536 - 25,625,716 (+)MAPPERmRatBN7.2
Rnor_6.02027,217,390 - 27,217,569NCBIRnor6.0
Rnor_6.02027,177,878 - 27,178,057NCBIRnor6.0
Rnor_5.02029,018,416 - 29,018,595UniSTSRnor5.0
Rnor_5.02029,057,928 - 29,058,107UniSTSRnor5.0
RGSC_v3.42025,353,270 - 25,353,449UniSTSRGSC3.4
Celera2026,921,300 - 26,921,479UniSTS
Cytogenetic Map20p11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000032600   ⟹   ENSRNOP00000029804
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2025,615,638 - 25,624,521 (+)Ensembl
mRatBN7.2 Ensembl2025,620,329 - 25,625,705 (+)Ensembl
Rnor_6.0 Ensembl2027,212,724 - 27,216,743 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000073617   ⟹   ENSRNOP00000064570
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2025,615,614 - 25,620,981 (+)Ensembl
mRatBN7.2 Ensembl2025,616,944 - 25,625,095 (+)Ensembl
Rnor_6.0 Ensembl2027,173,213 - 27,177,232 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000077525   ⟹   ENSRNOP00000069405
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2025,615,577 - 25,625,162 (+)Ensembl
mRatBN7.2 Ensembl2025,616,947 - 25,625,101 (+)Ensembl
Rnor_6.0 Ensembl2027,169,267 - 27,216,941 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000105550   ⟹   ENSRNOP00000076797
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2025,619,563 - 25,624,521 (+)Ensembl
mRatBN7.2 Ensembl2025,614,733 - 25,625,750 (+)Ensembl
RefSeq Acc Id: NM_001108532   ⟹   NP_001102002
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82025,619,540 - 25,624,397 (+)NCBI
mRatBN7.22025,620,848 - 25,625,705 (+)NCBI
Rnor_6.02027,173,190 - 27,178,046 (+)NCBI
Rnor_5.02029,008,607 - 29,019,348 (+)NCBI
RGSC_v3.42025,353,281 - 25,358,138 (-)RGD
Celera2026,916,611 - 26,921,468 (+)RGD
Sequence:
RefSeq Acc Id: XM_006256380   ⟹   XP_006256442
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82025,619,546 - 25,623,789 (+)NCBI
mRatBN7.22025,616,400 - 25,625,814 (+)NCBI
Rnor_6.02027,172,806 - 27,177,443 (+)NCBI
Rnor_5.02029,008,607 - 29,019,348 (+)NCBI
Sequence:
RefSeq Acc Id: NP_001102002   ⟸   NM_001108532
- UniProtKB: D4ABK7 (UniProtKB/TrEMBL),   A6JKZ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006256442   ⟸   XM_006256380
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JVA2 (UniProtKB/TrEMBL),   A6JKZ9 (UniProtKB/TrEMBL),   D4ABK7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000064570   ⟸   ENSRNOT00000073617
Ensembl Acc Id: ENSRNOP00000069405   ⟸   ENSRNOT00000077525
Ensembl Acc Id: ENSRNOP00000029804   ⟸   ENSRNOT00000032600
Ensembl Acc Id: ENSRNOP00000076797   ⟸   ENSRNOT00000105550
Protein Domains
RRM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4ABK7-F1-model_v2 AlphaFold D4ABK7 1-346 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13701574
Promoter ID:EPDNEW_R12095
Type:initiation region
Name:LOC100910795_1
Description:heterogeneous nuclear ribonucleoprotein H3-like
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.02027,169,292 - 27,169,352EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1310019 AgrOrtholog
BioCyc Gene G2FUF-3810 BioCyc
Ensembl Genes ENSRNOG00000048193 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000032600 ENTREZGENE
  ENSRNOT00000032600.7 UniProtKB/TrEMBL
  ENSRNOT00000073617.4 UniProtKB/TrEMBL
  ENSRNOT00000077525 ENTREZGENE
  ENSRNOT00000077525.3 UniProtKB/TrEMBL
  ENSRNOT00000105550.2 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.330 UniProtKB/TrEMBL
InterPro ESRP UniProtKB/TrEMBL
  hnRNPH3_RRM2 UniProtKB/TrEMBL
  hnRNPH3_RRM3 UniProtKB/TrEMBL
  Nucleotide-bd_a/b_plait_sf UniProtKB/TrEMBL
  RBD_domain_sf UniProtKB/TrEMBL
  RRM_RNP1 UniProtKB/TrEMBL
KEGG Report rno:361838 UniProtKB/TrEMBL
NCBI Gene 361838 ENTREZGENE
PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED UniProtKB/TrEMBL
Pfam RRM_1 UniProtKB/TrEMBL
PhenoGen Hnrnph3 PhenoGen
PROSITE RRM UniProtKB/TrEMBL
RatGTEx ENSRNOG00000048193 RatGTEx
SMART RRM UniProtKB/TrEMBL
Superfamily-SCOP SSF54928 UniProtKB/TrEMBL
UniProt A0A0G2JVA2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5YBW9_RAT UniProtKB/TrEMBL
  A6JKZ7 ENTREZGENE, UniProtKB/TrEMBL
  A6JKZ9 ENTREZGENE, UniProtKB/TrEMBL
  D4ABK7 ENTREZGENE, UniProtKB/TrEMBL
  M0R5A6_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Hnrnph3  heterogeneous nuclear ribonucleoprotein H3  LOC100910795  heterogeneous nuclear ribonucleoprotein H3-like  Data merged from RGD:6496679 737654 PROVISIONAL
2015-08-24 Hnrnph3  heterogeneous nuclear ribonucleoprotein H3  Hnrnph3  heterogeneous nuclear ribonucleoprotein H3 (2H9)  Name changed 629549 APPROVED
2012-07-05 LOC100910795  heterogeneous nuclear ribonucleoprotein H3-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-09-24 Hnrnph3  heterogeneous nuclear ribonucleoprotein H3 (2H9)  Hnrnph3  heterogeneous nuclear ribonucleoprotein H3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-05-19 Hnrnph3  heterogeneous nuclear ribonucleoprotein H3  Hnrph3  heterogeneous nuclear ribonucleoprotein H3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-04 Hnrph3  heterogeneous nuclear ribonucleoprotein H3  Hnrph3_predicted  heterogeneous nuclear ribonucleoprotein H3 (2H9) (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-12 Hnrph3_predicted  heterogeneous nuclear ribonucleoprotein H3 (2H9) (predicted)      Symbol and Name status set to approved 70820 APPROVED