Tbc1d14 (TBC1 domain family, member 14)

Gene: Tbc1d14 (TBC1 domain family, member 14) Rattus norvegicus

Analyze

Symbol:

Tbc1d14

Name:

TBC1 domain family, member 14

RGD ID:

1309993

Description:

Predicted to enable GTPase activator activity and protein kinase binding activity. Predicted to be involved in negative regulation of autophagy; recycling endosome to Golgi transport; and regulation of autophagosome assembly. Predicted to be located in Golgi apparatus and nucleoplasm. Predicted to be active in autophagosome and recycling endosome. Orthologous to human TBC1D14 (TBC1 domain family member 14); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; cocaine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC360956; MGC124676; spermatogenesis-related factor 2; SRF-2; TBC1 domain family member 14; Up-regulated in nephrectomized rat kidney #2; UR-NR#2

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TBC1D14 (TBC1 domain family member 14)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Tbc1d14 (TBC1 domain family, member 14)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tbc1d14 (TBC1 domain family member 14)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TBC1D14 (TBC1 domain family member 14)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TBC1D14 (TBC1 domain family member 14)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tbc1d14 (TBC1 domain family member 14)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TBC1D14 (TBC1 domain family member 14)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TBC1D14 (TBC1 domain family member 14)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tbc1d14 (TBC1 domain family member 14)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ANGEL2 (angel homolog 2)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	TBC1D14 (TBC1 domain family member 14)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Tbc1d14 (TBC1 domain family, member 14)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	tbc1d14 (TBC1 domain family, member 14)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	tbc-12	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	tbc1d14	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	78,397,345 - 78,496,863 (+)	NCBI		GRCr8
mRatBN7.2	14	74,172,652 - 74,272,182 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	74,172,664 - 74,272,183 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	78,614,976 - 78,714,238 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	79,855,848 - 79,955,111 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	76,300,816 - 76,400,084 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	79,172,272 - 79,438,765 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	79,205,466 - 79,438,764 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	78,978,024 - 79,077,775 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	79,753,480 - 79,852,987 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	79,818,510 - 79,855,377 (+)	NCBI
Celera	14	73,111,044 - 73,210,392 (+)	NCBI		Celera
Cytogenetic Map	14	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-hydroxypropanoic acid (ISO)

2-methylcholine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4-hydroxyphenyl retinamide (ISO)

acrolein (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

antirheumatic drug (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[e]pyrene (ISO)

Benzo[k]fluoranthene (ISO)

bisphenol A (EXP,ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

cocaine (EXP)

copper(II) sulfate (ISO)

corn oil (EXP)

cyclosporin A (ISO)

diazinon (ISO)

dibutyl phthalate (EXP)

dicrotophos (ISO)

endosulfan (EXP)

ethanol (ISO)

folic acid (ISO)

FR900359 (ISO)

fulvestrant (ISO)

gentamycin (EXP)

lead diacetate (ISO)

lead(0) (ISO)

methapyrilene (ISO)

oxaliplatin (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

perfluorohexanesulfonic acid (ISO)

rac-lactic acid (ISO)

rotenone (EXP)

sodium fluoride (ISO)

Soman (EXP)

titanium dioxide (ISO)

topotecan (EXP)

triphenyl phosphate (EXP)

triptonide (ISO)

triticonazole (EXP)

trovafloxacin (EXP)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of autophagy (IEA,ISO)

recycling endosome to Golgi transport (IEA,ISO)

regulation of autophagosome assembly (IBA,IEA,ISO)

regulation of cilium assembly (ISO)

Cellular Component

autophagosome (IBA,IEA,ISO)

cytosol (IEA)

Golgi apparatus (IEA,ISO)

intracellular membrane-bounded organelle (ISO)

nucleoplasm (IEA,ISO)

recycling endosome (IBA,IEA,ISO)

Molecular Function

GTPase activator activity (IBA)

protein binding (ISO)

protein kinase binding (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15200410	PMID:15758561	PMID:17562788	PMID:17646400	PMID:22613832

Genomics

Comparative Map Data

Tbc1d14
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	78,397,345 - 78,496,863 (+)	NCBI		GRCr8
mRatBN7.2	14	74,172,652 - 74,272,182 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	74,172,664 - 74,272,183 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	78,614,976 - 78,714,238 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	79,855,848 - 79,955,111 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	76,300,816 - 76,400,084 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	79,172,272 - 79,438,765 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	79,205,466 - 79,438,764 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	78,978,024 - 79,077,775 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	79,753,480 - 79,852,987 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	79,818,510 - 79,855,377 (+)	NCBI
Celera	14	73,111,044 - 73,210,392 (+)	NCBI		Celera
Cytogenetic Map	14	q21	NCBI

TBC1D14
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	6,909,466 - 7,033,114 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	6,909,242 - 7,033,118 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	6,911,193 - 7,034,841 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	6,962,473 - 7,085,739 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	4	7,029,643 - 7,152,911	NCBI
Celera	4	6,813,220 - 6,939,146 (+)	NCBI		Celera
Cytogenetic Map	4	p16.1	NCBI
HuRef	4	6,838,793 - 6,962,071 (+)	NCBI		HuRef
CHM1_1	4	6,909,420 - 7,033,430 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	4	6,881,403 - 7,004,950 (+)	NCBI		T2T-CHM13v2.0

Tbc1d14
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	36,647,948 - 36,743,611 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	36,647,948 - 36,750,620 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	36,490,604 - 36,586,271 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	36,490,604 - 36,593,276 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	36,833,253 - 36,928,875 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	36,807,699 - 36,899,468 (-)	NCBI		MGSCv36	mm8
Celera	5	33,971,593 - 34,068,555 (-)	NCBI		Celera
Cytogenetic Map	5	B3	NCBI
cM Map	5	19.15	NCBI

Tbc1d14
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955514	3,485,841 - 3,567,377 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955514	3,485,975 - 3,553,840 (-)	NCBI	ChiLan1.0	ChiLan1.0

TBC1D14
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	7,175,098 - 7,299,473 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	7,103,098 - 7,228,502 (+)	NCBI		NHGRI_mPanPan1
PanPan1.1	4	6,978,791 - 7,100,472 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	6,978,787 - 7,100,472 (+)	Ensembl	panpan1.1		panPan2

TBC1D14
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	58,992,743 - 59,097,581 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	58,926,237 - 59,097,621 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	61,639,679 - 61,744,462 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	59,464,257 - 59,569,212 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	59,355,767 - 59,571,294 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	58,961,586 - 59,066,513 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	59,163,570 - 59,268,428 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	59,517,757 - 59,622,733 (+)	NCBI		UU_Cfam_GSD_1.0

Tbc1d14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405285	65,059,358 - 65,158,292 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936477	18,761,477 - 18,859,988 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936477	18,761,034 - 18,864,578 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TBC1D14
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	3,833,317 - 3,929,059 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	3,833,314 - 3,918,783 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	3,279,017 - 3,375,802 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TBC1D14
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	27	43,028,552 - 43,147,870 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	27	43,029,135 - 43,146,474 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	89,878,251 - 90,002,772 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tbc1d14
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624755	23,164,288 - 23,252,771 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624755	23,164,315 - 23,255,023 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Tbc1d14
417 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	913
Count of miRNA genes:	310
Interacting mature miRNAs:	428
Transcripts:	ENSRNOT00000058414
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631839	Niddm37	Non-insulin dependent diabetes mellitus QTL 37	3.37		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	14	11030622	95876975	Rat
70187	Pancm5	Pancreatic morphology QTL 5	16.7		pancreas mass (VT:0010144)	pancreas weight to body weight ratio (CMO:0000630)	14	30320092	80829842	Rat
2313048	Bss84	Bone structure and strength QTL 84	3.1	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	14	37669719	82669719	Rat
2313084	Bss83	Bone structure and strength QTL 83	2.9	0.0001	tibia size trait (VT:0100001)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	14	37669719	82669719	Rat
2313089	Bss81	Bone structure and strength QTL 81	3.4	0.0001	body length (VT:0001256)	body length, nose to rump (CMO:0000079)	14	37669719	82669719	Rat
2313100	Bss82	Bone structure and strength QTL 82	3	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	14	37669719	82669719	Rat
738037	Hcas6	Hepatocarcinoma susceptibility QTL 6	2.93		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)	14	39057237	83368335	Rat
70214	Niddm28	Non-insulin dependent diabetes mellitus QTL 28	4.06		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	14	39998251	75582726	Rat
631523	Pia13	Pristane induced arthritis QTL 13	3.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	14	40793460	98037301	Rat
1300136	Rf22	Renal function QTL 22	3.9		renal blood flow trait (VT:2000006)	absolute change in renal vascular resistance (CMO:0001900)	14	42262529	95023211	Rat
1549834	Scl45	Serum cholesterol level QTL 45	5.8		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	14	50023211	95023211	Rat
2300197	Scl59	Serum cholesterol level QTL 59			blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	14	55147478	100147478	Rat
9590294	Uminl4	Urine mineral level QTL 4	5.66	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	14	55624247	100624247	Rat
9589034	Epfw11	Epididymal fat weight QTL 11	6	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	14	55624247	100624247	Rat
2317879	Alcrsp27	Alcohol response QTL 27	3.3	0.63	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	14	56631369	101631369	Rat
634328	Hc5	Hypercalciuria QTL 5	2.3		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	14	58184885	103184885	Rat
70153	Bp59	Blood pressure QTL 59	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	14	68757796	83368335	Rat
1582259	Gluco23	Glucose level QTL 23	3.1	0.0008	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	14	70053989	104886043	Rat
1641900	Alcrsp11	Alcohol response QTL 11			alcohol metabolism trait (VT:0015089)	blood ethanol level (CMO:0000535)	14	70053989	104886043	Rat
1582197	Gluco27	Glucose level QTL 27	3.4	0.0006	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	14	73415323	92554092	Rat
1582209	Gluco20	Glucose level QTL 20	3.8	0.0005	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	14	73415323	92554092	Rat
1582236	Gluco22	Glucose level QTL 22	3.3	0.0164	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	14	73415323	92554092	Rat
1582255	Gluco29	Glucose level QTL 29	3.1	0.0025	blood glucose amount (VT:0000188)	absolute change in blood glucose level area under curve (CMO:0002034)	14	73415323	92554092	Rat
1582250	Gluco26	Glucose level QTL 26	3.3	0.0009	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	14	73415323	95876975	Rat

Markers in Region

D3S3992

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_5.0	15	112,920,334 - 112,920,531	NCBI	Rnor5.0
Rnor_5.0	14	78,841,619 - 78,841,815	NCBI	Rnor5.0
Rnor_5.0	14	79,023,764 - 79,023,960	NCBI	Rnor5.0
RGSC_v3.4	15	108,272,520 - 108,272,716	UniSTS	RGSC3.4
RGSC_v3.4	14	79,798,978 - 79,799,173	UniSTS	RGSC3.4
Celera	15	98,973,072 - 98,973,268	UniSTS
Celera	20	52,971,436 - 52,971,634	UniSTS
Celera	14	73,156,533 - 73,156,728	UniSTS
Cytogenetic Map	14	q21	UniSTS

D5Ertd110e

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	14	74,271,877 - 74,272,118 (+)	MAPPER	mRatBN7.2
Rnor_6.0	14	79,438,461 - 79,438,701	NCBI	Rnor6.0
Rnor_5.0	14	79,077,471 - 79,077,711	UniSTS	Rnor5.0
RGSC_v3.4	14	79,852,683 - 79,852,923	UniSTS	RGSC3.4
Celera	14	73,210,088 - 73,210,328	UniSTS
Cytogenetic Map	14	q21	UniSTS

C86258

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	14	74,271,529 - 74,271,738 (+)	MAPPER	mRatBN7.2
Rnor_6.0	14	79,438,113 - 79,438,321	NCBI	Rnor6.0
Rnor_5.0	14	79,077,123 - 79,077,331	UniSTS	Rnor5.0
RGSC_v3.4	14	79,852,335 - 79,852,543	UniSTS	RGSC3.4
Celera	14	73,209,740 - 73,209,948	UniSTS
Cytogenetic Map	14	q21	UniSTS

RH142351

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	14	74,271,832 - 74,271,982 (+)	MAPPER	mRatBN7.2
Rnor_6.0	14	79,438,416 - 79,438,565	NCBI	Rnor6.0
Rnor_5.0	14	79,077,426 - 79,077,575	UniSTS	Rnor5.0
RGSC_v3.4	14	79,852,638 - 79,852,787	UniSTS	RGSC3.4
Celera	14	73,210,043 - 73,210,192	UniSTS
Cytogenetic Map	14	q21	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	34	43	33	13	33		3	66	35	39	11
Low		9	14	8	6	8	8	8	8		2		8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001012152	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001034021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001113365	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006251133	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006251134	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008770325	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008770326	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599297	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039092194	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063273358	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063273359	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063273360	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB108668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB117752	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC129986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC099760	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC107659	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB746983	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473963	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226649	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000058414 ⟹ ENSRNOP00000055215

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	14	74,172,664 - 74,272,181 (+)	Ensembl
Rnor_6.0 Ensembl	14	79,339,258 - 79,438,764 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000077846 ⟹ ENSRNOP00000074160

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	14	74,188,461 - 74,272,181 (+)	Ensembl
Rnor_6.0 Ensembl	14	79,343,499 - 79,438,764 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000082704 ⟹ ENSRNOP00000072277

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	14	74,235,202 - 74,272,183 (+)	Ensembl
Rnor_6.0 Ensembl	14	79,401,834 - 79,438,764 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000085534 ⟹ ENSRNOP00000075351

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	14	74,172,664 - 74,268,505 (+)	Ensembl
Rnor_6.0 Ensembl	14	79,205,466 - 79,436,522 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000094036 ⟹ ENSRNOP00000081599

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	14	74,172,664 - 74,272,181 (+)	Ensembl

RefSeq Acc Id:

NM_001012152 ⟹ NP_001012152

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	78,459,932 - 78,496,863 (+)	NCBI
mRatBN7.2	14	74,235,251 - 74,272,182 (+)	NCBI
Rnor_6.0	14	79,401,834 - 79,438,765 (+)	NCBI
Rnor_5.0	14	78,978,024 - 79,077,775 (+)	NCBI
RGSC_v3.4	14	79,753,480 - 79,852,987 (+)	RGD
Celera	14	73,173,500 - 73,210,392 (+)	NCBI

Sequence:

show sequence

CGGCCACCAGCCCGCCTCACCCGCCCAGTGTGGAGCTGCGTGTAGATCCGTGGTCCAGACGCTG
GAGTGAGGCTGGCCTCCACTCACTGGGCATGGAGCCTCCGGCCACGCGCCTCTGAGGCCTGGCG
TTCATGGAATATGAAGACAAGGCTGGAAGACCAAGCAGGCCGCCCTCTCCAAAGCAGAATGTGA
GGAAGAACCTGGATTTTGAGCCACTGTCCACCACAGCGCTCATCCTTGAGGACAGACCCGCGAA
TCTCCCAGCAAAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAGTATGAAGAGATGGTGGTG
CAGGCTAAGAAACGAGAGCTTAAAGAAGCCCAGCGGCGGAAGAAACAGCTGGAGGAAAGGTGCA
AGGTTGAAGAGAGCATTGGAAACGCCGTCCTCACCTGGAATAATGAGATCTTGCCTAACTGGGA
AACCATGTGGTGCTCTAAGAAGGTTCGAGACTTGTGGTGGCAGGGAATCCCTCCGAGTGTAAGA
GGCAAAGTTTGGAGCTTGGCCATTGGCAACGAGCTGAACATCACTCACGAGCTCTTTGACATCT
GTCTTGCTCGGGCCAAGGAGCGGTGGCGGTCCCTCAGCACTGGAGGCTCAGAAGTGGAGAATGA
AGATGCTGGGTTTTCAGCAGCAGACAGAGAGGCCAGTCTGGAGCTTATTAAACTGGACATTTCT
AGAACATTTCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCATATCATGACATGTTGCACAGTA
TTTTGGGCGCTTATACTTGTTACCGGCCGGATGTGGGTTATGTTCAGGGCATGTCCTTTATAGC
TGCAGTGTTGATCTTGAACCTCGATACTGCAGATGCCTTTATTGCTTTTTCTAATCTTTTGAAT
AAACCCTGTCAAATGGCGTTTTTCCGAGTGGACCATGGCCTTATGTTGACTTACTTTGCTGCAT
TTGAGGTATTCTTTGAAGAAAACTTGCCGAAATTGTTTGCGCATTTCAAGAAAAACAACTTAAC
TGCAGACATCTACCTAATTGATTGGATTTTTACCTTGTACAGTAAGTCCCTGCCCTTGGACTTG
GCCTGCCGCATCTGGGATGTATTCTGTCGAGATGGAGAGGAATTTCTCTTCCGCACAGCTCTGG
GCATCCTGAAGCTTTTTGAGGATATCCTGACCAGGATGGACTTCATCCACAGTGCCCAGTTTCT
GACCAGGCTGCCTGAGGACCTGCCAGCAGACGACGTGTTCGCAGCTATCTCTACAGTCCAGATG
CAAAGCCGCAACAAGAAATGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGAAATGG
AGAAAGGAAGCCCATCACTCAGACACTGAGGCTCAGGGCTAACTCCCACCTGCCACTACAGCAG
AGCTCGACATGGACCTGTGTGCTTTCAGACTGAAGCCTGGCATGAACAGGGCTCTTTCCATGTT
GGCTTTCTGATGCTCAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGC
AGCTCAGTGGACCCATGCACTGTCATTGGTCATGGCTAGCCGCTGCATTTTCTACATGGGTTCA
AGAAAGGGCAGGCTGTCTCTGAACCTTTATTCCAGCAACAGTCAATTAAATTGTAATGCTATTA
TGCCAACTACTGGAAGGTACATTACAATCTTTCTTAGCCAAGATGCATGAGAAATGTTATTAGG
AAACCTCAGAGTTGTTATTGGCTCATATGCTTGTGAGAAAGGAATTATTTAGTTACTAAGATAA
GCTTTCCAGAGATGAAGGGTGTGTTTTAAATCTCATACCAAGGACAGGGTAAGGAAGACGGGCC
CTTGGAGGGCAGTTGCTGGTGAATGCTCACAGGCTTCGAAAATGCACTTGACCTTTGTGCTGAC
ATTGACCCTGTTGCCTTGACACATGAGAGCAAGAAGGCTGAGTTCATATTAGGATCCTACTCTT
CAAAGTAGCACTCACTGCATCTTGGGAGCCACACTGGTTGGAGCAGGGAAGTCACTTGCTGCAG
AGGGACAGAGGCCGGCCCTGTAAAGAGAGATGTAGGACGAGACTGCAAACTCTCCTCTTCTTAC
CCGCTCGCTTCTGGGGAGGCTAGCATGACAGCCTCTGAAAACACCATTGTGTAGGAGATGGTTT
CCTTGCTTAAGCTGAATGTCCCTTTTTGCCTTTGTCACCTGAGTAGTTGGATCCCTTCTAAGTG
CCAGTGATTGTCCCCTATCCCCATCTGGCTTTAGAAAATGAGCTTCACACACTGCTGAAAGGAC
TGGAGTATGGCAGTCTTCCACATTCTCAGTGTCCCGAGCCCTTCCCCATTGCAGCTGATTCCTC
TCAGCTCATTGGGGAGGTGGTGGTGGTTCTAGCTTTTCCTTGACTTAAGAACTTTGTATAAGAA
ATGATTATCCAAATTCACAGAAGTGAACAGTTTCTACATAGAATAGGACAGTCCAGTATCTATG
GAAACGGGTTACCTCCTGATCATCCACTGGCATTCTGAACCCTGAGGTACAGGTAGGCCAGTCC
TAGCCTAGGGCTGAGGACATATTCTCCAGCCAACACCTGTGTAGTCTGTAGTGCACAGCCCTCT
ACAGCCATACCTTCTACCCCAGAATTCACCCTCTCAATCGGTGTAGTTTCTGATAGCCGTAGGG
GAGCCCTTGACTGACTACAGCATGTGGCAGGGAGGCTTGGGTCAGCCTCATGGCGCTGTGTTTG
CATGGGTTCCCTTCATCTGGTGTGCCTGTTGGTGATCATCTAGTGTATCAGCAGGCTGTCATGT
TCATGCTATTCACCCCATGCTCCCACTTTTTTCTTGGAGTCTCATTTGTAGTCTGTGACTTCTT
CAGGGAGGCCACAGAGCACCCTCCATGTAGCTCTCTGCCTTAGTGTGAAAGGCTGATGTCTGAC
CTCTTGGAGGAGGATGTCTTCACCAGCCATCCAATGGCCTCCAGACCCAGCCATTCTTGACATC
AGATACTGAATGTAGCCCAGGCCCAGCTGGCCACGAGAATCGCACTACCCAGCCCTGTCCGCTG
TCCTTCCTTGCAGATGTACTTAGTTTCCTCCCACTACATGGGCATCTGTTCTCTCAAGATGTAT
ATATTTTCTTACTGTACATAAAGACATTCCTTAAGTCATACAGAAAGTGTTGTGACAAGGGGAC
TTGGGCACCTTGTTGTGAATGCCATCGTGGAATTCTCTGTGTGTTCACAACCCAGCCCTTAACT
TTTTCTTGTTTGACATAAACCTGTGGGCATGCATGAAGTTCTCCAACAAGACTCCATGCCAGCC
AAGCACTGACTGCATCTCTAGTCCAAACAAGGTCTTTATAGACTGACTGGGGCTCATGTGAGCC
TAATGTGCCCTCCTTCGAGGCTATACAGTTCCACGTTCCTCTACTTTGAGGGCGTCCCTCATAC
TCCTGTTGGCAAACTGGAAACTGACCCTACAGAGGTCTGCACCTCCCATCTCAATTGCCATTGA
CTTTCAGTCCCAAACTTGAGGGTGCTGGGCAGCTGGCACTCTTAGGGGAGCTTTCGGGAGAGGC
TTCCTGTCACTTGGGAGCAGTGCTTACTTCGAAGGTACTTCTAACTGCTCAGTTTGTGACTATT
TTTAAACAGTTTGCCAATAGAAAACTCCTGATAACACTTGCTACATATCATGTTTTAATTGCTT
GTACAGTTAACCTTTAATTTTGTTTAGTAAAGTGTATCAAACTAGGACTTTTTGAATTGTAAAT
ATGTGGTTTTATTAAAATAAAGTCATGTAAAATTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001034021 ⟹ NP_001029193

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	78,401,596 - 78,496,863 (+)	NCBI
mRatBN7.2	14	74,176,905 - 74,272,182 (+)	NCBI
Rnor_6.0	14	79,343,499 - 79,438,765 (+)	NCBI
Rnor_5.0	14	78,978,024 - 79,077,775 (+)	NCBI
RGSC_v3.4	14	79,753,480 - 79,852,987 (+)	RGD
Celera	14	73,115,285 - 73,210,392 (+)	NCBI

Sequence:

show sequence

GGCCGCTGACAGGCACCTGCTGTGGCCCGGCGTCTGCAGTGTCTAGCCTCCTAGCCCAGCAAGT
TGCCGGCCCCACGGGGCCTGGGCTGGGGGCCACAGGCCCGGAGATGGCGTTGGAGCTGCGGTAG
CTCGGTTTCTTCTTGGACCAAGATGACTGATGGAAACCTTTCCACCTCTATGAATGGTGTAGCA
TTGATGGGCATTCTAGATGGTCGGCCAGGAGACTCCCTTCAGGAATTGCAACACCTTAGTATCA
AGGCAGTGCCCAGATCCCTTTCAGTGCCTGACTATGGACCTACACTAAAACTTGGTGCTTTGGA
AGATCGACACAGCCTTCAGTCAGTGGACTCGGGCATTCCTACCCTGGAGATTGGCAACCCAGAG
CCTGTTCCCTGCAGTGTGGTCCATGTGAAGAGAAAGCAGTCTGAGTCAGAGATCATCCCGGAGC
GGGCCTTCCAGAGTGCGTGCCCCTTGCCATCCTGTACACCCTCAGCTCCCACTGGCAGCGAACG
GGAGCAAGCTGTGCGGAAGTCTTCCACCTTTCCCAGGACAGGCTATGACTCAGTGAAACTCTAC
AGCCCCACCTCCAAAGCCTTGAGCCGAAGTGACGATGTCTCTGTCTGCAGTGTGTCTAGTCTTG
GCACAGAACTGTCAACCACATTGTCGGTTAGCAATGAGGACATCTTGGACCTCATGGTCACGAG
CAATTCCAGTGCCATTGTGACGCTGGAGAACGATGATGACCCCCAGTTTACTGATGTCACCCTG
AGCTCCATCAAGGAAACCAGTGACTTACACCAGCAGGATTGTGTTGCTGAGACTGAGGAGGGGA
GGAAATTGAGGCTATTGCAACCATTCAGCCACTTCTTCACAAGGAATTTGCTTGCTAGAAAGCA
AAATGCAAGACTTGATAGACAGAGAGATTTGGGATGGAAGCTGTTTGGAAAAGTCCCACTCCGA
GAGACTGCTCAGAAAGATTCAAAGAAAACACAAAAGGAATATGAAGACAAGGCTGGAAGACCAA
GCAGGCCGCCCTCTCCAAAGCAGAATGTGAGGAAGAACCTGGATTTTGAGCCACTGTCCACCAC
AGCGCTCATCCTTGAGGACAGACCCGCGAATCTCCCAGCAAAGCCAGCTGAAGAAGCTCAAAAG
CACAGACAGCAGTATGAAGAGATGGTGGTGCAGGCTAAGAAACGAGAGCTTAAAGAAGCCCAGC
GGCGGAAGAAACAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCATTGGAAACGCCGTCCTCAC
CTGGAATAATGAGATCTTGCCTAACTGGGAAACCATGTGGTGCTCTAAGAAGGTTCGAGACTTG
TGGTGGCAGGGAATCCCTCCGAGTGTAAGAGGCAAAGTTTGGAGCTTGGCCATTGGCAACGAGC
TGAACATCACTCACGAGCTCTTTGACATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGTCCCT
CAGCACTGGAGGCTCAGAAGTGGAGAATGAAGATGCTGGGTTTTCAGCAGCAGACAGAGAGGCC
AGTCTGGAGCTTATTAAACTGGACATTTCTAGAACATTTCCTAATCTCTGCATTTTCCAGCAAG
GTGGTCCATATCATGACATGTTGCACAGTATTTTGGGCGCTTATACTTGTTACCGGCCGGATGT
GGGTTATGTTCAGGGCATGTCCTTTATAGCTGCAGTGTTGATCTTGAACCTCGATACTGCAGAT
GCCTTTATTGCTTTTTCTAATCTTTTGAATAAACCCTGTCAAATGGCGTTTTTCCGAGTGGACC
ATGGCCTTATGTTGACTTACTTTGCTGCATTTGAGGTATTCTTTGAAGAAAACTTGCCGAAATT
GTTTGCGCATTTCAAGAAAAACAACTTAACTGCAGACATCTACCTAATTGATTGGATTTTTACC
TTGTACAGTAAGTCCCTGCCCTTGGACTTGGCCTGCCGCATCTGGGATGTATTCTGTCGAGATG
GAGAGGAATTTCTCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTTGAGGATATCCTGACCAG
GATGGACTTCATCCACAGTGCCCAGTTTCTGACCAGGCTGCCTGAGGACCTGCCAGCAGACGAC
GTGTTCGCAGCTATCTCTACAGTCCAGATGCAAAGCCGCAACAAGAAATGGGCACAGGTGCTGT
CTGCACTGCAGAAAGACAGCCGGGAAATGGAGAAAGGAAGCCCATCACTCAGACACTGAGGCTC
AGGGCTAACTCCCACCTGCCACTACAGCAGAGCTCGACATGGACCTGTGTGCTTTCAGACTGAA
GCCTGGCATGAACAGGGCTCTTTCCATGTTGGCTTTCTGATGCTCAAGTTGGCCTTACAACAAA
ACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGACCCATGCACTGTCATTGGTCATG
GCTAGCCGCTGCATTTTCTACATGGGTTCAAGAAAGGGCAGGCTGTCTCTGAACCTTTATTCCA
GCAACAGTCAATTAAATTGTAATGCTATTATGCCAACTACTGGAAGGTACATTACAATCTTTCT
TAGCCAAGATGCATGAGAAATGTTATTAGGAAACCTCAGAGTTGTTATTGGCTCATATGCTTGT
GAGAAAGGAATTATTTAGTTACTAAGATAAGCTTTCCAGAGATGAAGGGTGTGTTTTAAATCTC
ATACCAAGGACAGGGTAAGGAAGACGGGCCCTTGGAGGGCAGTTGCTGGTGAATGCTCACAGGC
TTCGAAAATGCACTTGACCTTTGTGCTGACATTGACCCTGTTGCCTTGACACATGAGAGCAAGA
AGGCTGAGTTCATATTAGGATCCTACTCTTCAAAGTAGCACTCACTGCATCTTGGGAGCCACAC
TGGTTGGAGCAGGGAAGTCACTTGCTGCAGAGGGACAGAGGCCGGCCCTGTAAAGAGAGATGTA
GGACGAGACTGCAAACTCTCCTCTTCTTACCCGCTCGCTTCTGGGGAGGCTAGCATGACAGCCT
CTGAAAACACCATTGTGTAGGAGATGGTTTCCTTGCTTAAGCTGAATGTCCCTTTTTGCCTTTG
TCACCTGAGTAGTTGGATCCCTTCTAAGTGCCAGTGATTGTCCCCTATCCCCATCTGGCTTTAG
AAAATGAGCTTCACACACTGCTGAAAGGACTGGAGTATGGCAGTCTTCCACATTCTCAGTGTCC
CGAGCCCTTCCCCATTGCAGCTGATTCCTCTCAGCTCATTGGGGAGGTGGTGGTGGTTCTAGCT
TTTCCTTGACTTAAGAACTTTGTATAAGAAATGATTATCCAAATTCACAGAAGTGAACAGTTTC
TACATAGAATAGGACAGTCCAGTATCTATGGAAACGGGTTACCTCCTGATCATCCACTGGCATT
CTGAACCCTGAGGTACAGGTAGGCCAGTCCTAGCCTAGGGCTGAGGACATATTCTCCAGCCAAC
ACCTGTGTAGTCTGTAGTGCACAGCCCTCTACAGCCATACCTTCTACCCCAGAATTCACCCTCT
CAATCGGTGTAGTTTCTGATAGCCGTAGGGGAGCCCTTGACTGACTACAGCATGTGGCAGGGAG
GCTTGGGTCAGCCTCATGGCGCTGTGTTTGCATGGGTTCCCTTCATCTGGTGTGCCTGTTGGTG
ATCATCTAGTGTATCAGCAGGCTGTCATGTTCATGCTATTCACCCCATGCTCCCACTTTTTTCT
TGGAGTCTCATTTGTAGTCTGTGACTTCTTCAGGGAGGCCACAGAGCACCCTCCATGTAGCTCT
CTGCCTTAGTGTGAAAGGCTGATGTCTGACCTCTTGGAGGAGGATGTCTTCACCAGCCATCCAA
TGGCCTCCAGACCCAGCCATTCTTGACATCAGATACTGAATGTAGCCCAGGCCCAGCTGGCCAC
GAGAATCGCACTACCCAGCCCTGTCCGCTGTCCTTCCTTGCAGATGTACTTAGTTTCCTCCCAC
TACATGGGCATCTGTTCTCTCAAGATGTATATATTTTCTTACTGTACATAAAGACATTCCTTAA
GTCATACAGAAAGTGTTGTGACAAGGGGACTTGGGCACCTTGTTGTGAATGCCATCGTGGAATT
CTCTGTGTGTTCACAACCCAGCCCTTAACTTTTTCTTGTTTGACATAAACCTGTGGGCATGCAT
GAAGTTCTCCAACAAGACTCCATGCCAGCCAAGCACTGACTGCATCTCTAGTCCAAACAAGGTC
TTTATAGACTGACTGGGGCTCATGTGAGCCTAATGTGCCCTCCTTCGAGGCTATACAGTTCCAC
GTTCCTCTACTTTGAGGGCGTCCCTCATACTCCTGTTGGCAAACTGGAAACTGACCCTACAGAG
GTCTGCACCTCCCATCTCAATTGCCATTGACTTTCAGTCCCAAACTTGAGGGTGCTGGGCAGCT
GGCACTCTTAGGGGAGCTTTCGGGAGAGGCTTCCTGTCACTTGGGAGCAGTGCTTACTTCGAAG
GTACTTCTAACTGCTCAGTTTGTGACTATTTTTAAACAGTTTGCCAATAGAAAACTCCTGATAA
CACTTGCTACATATCATGTTTTAATTGCTTGTACAGTTAACCTTTAATTTTGTTTAGTAAAGTG
TATCAAACTAGGACTTTTTGAATTGTAAATATGTGGTTTTATTAAAATAAAGTCATGTAAAATT
GTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001113365 ⟹ NP_001106836

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	78,397,355 - 78,496,863 (+)	NCBI
mRatBN7.2	14	74,172,664 - 74,272,182 (+)	NCBI
Rnor_6.0	14	79,339,258 - 79,438,765 (+)	NCBI
Rnor_5.0	14	78,978,024 - 79,077,775 (+)	NCBI
RGSC_v3.4	14	79,753,480 - 79,852,987 (+)	RGD
Celera	14	73,111,044 - 73,210,392 (+)	RGD

Sequence:

show sequence

AGAATGGAGAGGGAAAGGACTGGGCTGTGGAGGGGCTCTGAGGGCCCCCTGGCCTAAGACGCTG
GACAGAGACAGCAAAGTCCCAGGGATTGGCATGTGAACCTACTGTGACTGTAACCATGCCATGC
CAGGAGCCAGTAGCATGGGAGGCAGGTTTGGGTTGGGCAGGACCTGACCTGGGGACAGTGGGAT
AGATTGGTGACACCAAGGCTGTGTTGCTTCACCTCCCAGCCCTATCCTCCTCTGTACGGTTCGA
GGCACTGAGTGAGCTTGGCAGGTCGTGGAGATCAACTTCTGTCACAGAGACTCAAGTTACAATG
AGGCTTTATCTAGACCGCTTCTGGGGACTGATGGTAAAAGTTTCTTCTTGGACCAAGATGACTG
ATGGAAACCTTTCCACCTCTATGAATGGTGTAGCATTGATGGGCATTCTAGATGGTCGGCCAGG
AGACTCCCTTCAGGAATTGCAACACCTTAGTATCAAGGCAGTGCCCAGATCCCTTTCAGTGCCT
GACTATGGACCTACACTAAAACTTGGTGCTTTGGAAGATCGACACAGCCTTCAGTCAGTGGACT
CGGGCATTCCTACCCTGGAGATTGGCAACCCAGAGCCTGTTCCCTGCAGTGTGGTCCATGTGAA
GAGAAAGCAGTCTGAGTCAGAGATCATCCCGGAGCGGGCCTTCCAGAGTGCGTGCCCCTTGCCA
TCCTGTACACCCTCAGCTCCCACTGGCAGCGAACGGGAGCAAGCTGTGCGGAAGTCTTCCACCT
TTCCCAGGACAGGCTATGACTCAGTGAAACTCTACAGCCCCACCTCCAAAGCCTTGAGCCGAAG
TGACGATGTCTCTGTCTGCAGTGTGTCTAGTCTTGGCACAGAACTGTCAACCACATTGTCGGTT
AGCAATGAGGACATCTTGGACCTCATGGTCACGAGCAATTCCAGTGCCATTGTGACGCTGGAGA
ACGATGATGACCCCCAGTTTACTGATGTCACCCTGAGCTCCATCAAGGAAACCAGTGACTTACA
CCAGCAGGATTGTGTTGCTGAGACTGAGGAGGGGAGGAAATTGAGGCTATTGCAACCATTCAGC
CACTTCTTCACAAGGAATTTGCTTGCTAGAAAGCAAAATGCAAGACTTGATAGACAGAGAGATT
TGGGATGGAAGCTGTTTGGAAAAGTCCCACTCCGAGAGACTGCTCAGAAAGATTCAAAGAAAAC
ACAAAAGGAATATGAAGACAAGGCTGGAAGACCAAGCAGGCCGCCCTCTCCAAAGCAGAATGTG
AGGAAGAACCTGGATTTTGAGCCACTGTCCACCACAGCGCTCATCCTTGAGGACAGACCCGCGA
ATCTCCCAGCAAAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAGTATGAAGAGATGGTGGT
GCAGGCTAAGAAACGAGAGCTTAAAGAAGCCCAGCGGCGGAAGAAACAGCTGGAGGAAAGGTGC
AAGGTTGAAGAGAGCATTGGAAACGCCGTCCTCACCTGGAATAATGAGATCTTGCCTAACTGGG
AAACCATGTGGTGCTCTAAGAAGGTTCGAGACTTGTGGTGGCAGGGAATCCCTCCGAGTGTAAG
AGGCAAAGTTTGGAGCTTGGCCATTGGCAACGAGCTGAACATCACTCACGAGCTCTTTGACATC
TGTCTTGCTCGGGCCAAGGAGCGGTGGCGGTCCCTCAGCACTGGAGGCTCAGAAGTGGAGAATG
AAGATGCTGGGTTTTCAGCAGCAGACAGAGAGGCCAGTCTGGAGCTTATTAAACTGGACATTTC
TAGAACATTTCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCATATCATGACATGTTGCACAGT
ATTTTGGGCGCTTATACTTGTTACCGGCCGGATGTGGGTTATGTTCAGGGCATGTCCTTTATAG
CTGCAGTGTTGATCTTGAACCTCGATACTGCAGATGCCTTTATTGCTTTTTCTAATCTTTTGAA
TAAACCCTGTCAAATGGCGTTTTTCCGAGTGGACCATGGCCTTATGTTGACTTACTTTGCTGCA
TTTGAGGTATTCTTTGAAGAAAACTTGCCGAAATTGTTTGCGCATTTCAAGAAAAACAACTTAA
CTGCAGACATCTACCTAATTGATTGGATTTTTACCTTGTACAGTAAGTCCCTGCCCTTGGACTT
GGCCTGCCGCATCTGGGATGTATTCTGTCGAGATGGAGAGGAATTTCTCTTCCGCACAGCTCTG
GGCATCCTGAAGCTTTTTGAGGATATCCTGACCAGGATGGACTTCATCCACAGTGCCCAGTTTC
TGACCAGGCTGCCTGAGGACCTGCCAGCAGACGACGTGTTCGCAGCTATCTCTACAGTCCAGAT
GCAAAGCCGCAACAAGAAATGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGAAATG
GAGAAAGGAAGCCCATCACTCAGACACTGAGGCTCAGGGCTAACTCCCACCTGCCACTACAGCA
GAGCTCGACATGGACCTGTGTGCTTTCAGACTGAAGCCTGGCATGAACAGGGCTCTTTCCATGT
TGGCTTTCTGATGCTCAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAG
CAGCTCAGTGGACCCATGCACTGTCATTGGTCATGGCTAGCCGCTGCATTTTCTACATGGGTTC
AAGAAAGGGCAGGCTGTCTCTGAACCTTTATTCCAGCAACAGTCAATTAAATTGTAATGCTATT
ATGCCAACTACTGGAAGGTACATTACAATCTTTCTTAGCCAAGATGCATGAGAAATGTTATTAG
GAAACCTCAGAGTTGTTATTGGCTCATATGCTTGTGAGAAAGGAATTATTTAGTTACTAAGATA
AGCTTTCCAGAGATGAAGGGTGTGTTTTAAATCTCATACCAAGGACAGGGTAAGGAAGACGGGC
CCTTGGAGGGCAGTTGCTGGTGAATGCTCACAGGCTTCGAAAATGCACTTGACCTTTGTGCTGA
CATTGACCCTGTTGCCTTGACACATGAGAGCAAGAAGGCTGAGTTCATATTAGGATCCTACTCT
TCAAAGTAGCACTCACTGCATCTTGGGAGCCACACTGGTTGGAGCAGGGAAGTCACTTGCTGCA
GAGGGACAGAGGCCGGCCCTGTAAAGAGAGATGTAGGACGAGACTGCAAACTCTCCTCTTCTTA
CCCGCTCGCTTCTGGGGAGGCTAGCATGACAGCCTCTGAAAACACCATTGTGTAGGAGATGGTT
TCCTTGCTTAAGCTGAATGTCCCTTTTTGCCTTTGTCACCTGAGTAGTTGGATCCCTTCTAAGT
GCCAGTGATTGTCCCCTATCCCCATCTGGCTTTAGAAAATGAGCTTCACACACTGCTGAAAGGA
CTGGAGTATGGCAGTCTTCCACATTCTCAGTGTCCCGAGCCCTTCCCCATTGCAGCTGATTCCT
CTCAGCTCATTGGGGAGGTGGTGGTGGTTCTAGCTTTTCCTTGACTTAAGAACTTTGTATAAGA
AATGATTATCCAAATTCACAGAAGTGAACAGTTTCTACATAGAATAGGACAGTCCAGTATCTAT
GGAAACGGGTTACCTCCTGATCATCCACTGGCATTCTGAACCCTGAGGTACAGGTAGGCCAGTC
CTAGCCTAGGGCTGAGGACATATTCTCCAGCCAACACCTGTGTAGTCTGTAGTGCACAGCCCTC
TACAGCCATACCTTCTACCCCAGAATTCACCCTCTCAATCGGTGTAGTTTCTGATAGCCGTAGG
GGAGCCCTTGACTGACTACAGCATGTGGCAGGGAGGCTTGGGTCAGCCTCATGGCGCTGTGTTT
GCATGGGTTCCCTTCATCTGGTGTGCCTGTTGGTGATCATCTAGTGTATCAGCAGGCTGTCATG
TTCATGCTATTCACCCCATGCTCCCACTTTTTTCTTGGAGTCTCATTTGTAGTCTGTGACTTCT
TCAGGGAGGCCACAGAGCACCCTCCATGTAGCTCTCTGCCTTAGTGTGAAAGGCTGATGTCTGA
CCTCTTGGAGGAGGATGTCTTCACCAGCCATCCAATGGCCTCCAGACCCAGCCATTCTTGACAT
CAGATACTGAATGTAGCCCAGGCCCAGCTGGCCACGAGAATCGCACTACCCAGCCCTGTCCGCT
GTCCTTCCTTGCAGATGTACTTAGTTTCCTCCCACTACATGGGCATCTGTTCTCTCAAGATGTA
TATATTTTCTTACTGTACATAAAGACATTCCTTAAGTCATACAGAAAGTGTTGTGACAAGGGGA
CTTGGGCACCTTGTTGTGAATGCCATCGTGGAATTCTCTGTGTGTTCACAACCCAGCCCTTAAC
TTTTTCTTGTTTGACATAAACCTGTGGGCATGCATGAAGTTCTCCAACAAGACTCCATGCCAGC
CAAGCACTGACTGCATCTCTAGTCCAAACAAGGTCTTTATAGACTGACTGGGGCTCATGTGAGC
CTAATGTGCCCTCCTTCGAGGCTATACAGTTCCACGTTCCTCTACTTTGAGGGCGTCCCTCATA
CTCCTGTTGGCAAACTGGAAACTGACCCTACAGAGGTCTGCACCTCCCATCTCAATTGCCATTG
ACTTTCAGTCCCAAACTTGAGGGTGCTGGGCAGCTGGCACTCTTAGGGGAGCTTTCGGGAGAGG
CTTCCTGTCACTTGGGAGCAGTGCTTACTTCGAAGGTACTTCTAACTGCTCAGTTTGTGACTAT
TTTTAAACAGTTTGCCAATAGAAAACTCCTGATAACACTTGCTACATATCATGTTTTAATTGCT
TGTACAGTTAACCTTTAATTTTGTTTAGTAAAGTGTATCAAACTAGGACTTTTTGAATTGTAAA
TATGTGGTTTTATTAAAATAAAGTCATGTAAAATTGTTAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006251133 ⟹ XP_006251195

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	78,397,345 - 78,492,443 (+)	NCBI
mRatBN7.2	14	74,172,652 - 74,267,765 (+)	NCBI
Rnor_6.0	14	79,339,251 - 79,434,296 (+)	NCBI
Rnor_5.0	14	78,978,024 - 79,077,775 (+)	NCBI

Sequence:

show sequence

CTCTAACAGAATGGAGAGGGAAAGGACTGGGCTGTGGAGGGGCTCTGAGGGCCCCCTGGCCTAA
GACGCTGGACAGAGACAGCAAAGTCCCAGGGATTGGCATGTGAACCTACTGTGACTGTAACCAT
GCCATGCCAGGAGCCAGTAGCATGGGAGGCAGGTTTGGGTTGGGCAGGACCTGACCTGGGGACA
GTGGGATAGATTGGTGACACCAAGGCTGTGTTGCTTCACCTCCCAGCCCTATCCTCCTCTGTAC
GGTTCGAGGCACTGAGTGAGCTTGGCAGGTCGTGGAGATCAACTTCTGTCACAGAGACTCAAGT
TACAATGAGGCTTTATCTAGACCGCTTCTGGGGACTGATGGTAAAAGTTTCTTCTTGGACCAAG
ATGACTGATGGAAACCTTTCCACCTCTATGAATGGTGTAGCATTGATGGGCATTCTAGATGGTC
GGCCAGGAGACTCCCTTCAGGAATTGCAACACCTTAGTATCAAGGCAGTGCCCAGATCCCTTTC
AGTGCCTGACTATGGACCTACACTAAAACTTGGTGCTTTGGAAGATCGACACAGCCTTCAGTCA
GTGGACTCGGGCATTCCTACCCTGGAGATTGGCAACCCAGAGCCTGTTCCCTGCAGTGTGGTCC
ATGTGAAGAGAAAGCAGTCTGAGTCAGAGATCATCCCGGAGCGGGCCTTCCAGAGTGCGTGCCC
CTTGCCATCCTGTACACCCTCAGCTCCCACTGGCAGCGAACGGGAGCAAGCTGTGCGGAAGTCT
TCCACCTTTCCCAGGACAGGCTATGACTCAGTGAAACTCTACAGCCCCACCTCCAAAGCCTTGA
GCCGAAGTGACGATGTCTCTGTCTGCAGTGTGTCTAGTCTTGGCACAGAACTGTCAACCACATT
GTCGGTTAGCAATGAGGACATCTTGGACCTCATGGTCACGAGCAATTCCAGTGCCATTGTGACG
CTGGAGAACGATGATGACCCCCAGTTTACTGATGTCACCCTGAGCTCCATCAAGGAAACCAGTG
ACTTACACCAGCAGGATTGTGTTGCTGAGACTGAGGAGGGGAGGAAATTGAGGCTATTGCAACC
ATTCAGCCACTTCTTCACAAGGAATTTGCTTGCTAGAAAGCAAAATGCAAGACTTGATAGACAG
AGAGATTTGGGATGGAAGCTGTTTGGAAAAGTCCCACTCCGAGAGACTGCTCAGAAAGATTCAA
AGAAAACACAAAAGGAATATGAAGACAAGGCTGGAAGACCAAGCAGGCCGCCCTCTCCAAAGCA
GAATGTGAGGAAGAACCTGGATTTTGAGCCACTGTCCACCACAGCGCTCATCCTTGAGGACAGA
CCCGCGAATCTCCCAGCAAAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAGTATGAAGAGA
TGGTGGTGCAGGCTAAGAAACGAGAGCTTAAAGAAGCCCAGCGGCGGAAGAAACAGCTGGAGGA
AAGGTGCAAGGTTGAAGAGAGCATTGGAAACGCCGTCCTCACCTGGAATAATGAGATCTTGCCT
AACTGGGAAACCATGTGGTGCTCTAAGAAGGTTCGAGACTTGTGGTGGCAGGGAATCCCTCCGA
GTGTAAGAGGCAAAGTTTGGAGCTTGGCCATTGGCAACGAGCTGAACATCACTCACGAGCTCTT
TGACATCTGTCTTGCTCGGGCCAAGGAGCGGTGGCGGTCCCTCAGCACTGGAGGCTCAGAAGTG
GAGAATGAAGATGCTGGGTTTTCAGCAGCAGACAGAGAGGCCAGTCTGGAGCTTATTAAACTGG
ACATTTCTAGAACATTTCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCATATCATGACATGTT
GCACAGTATTTTGGGCGCTTATACTTGTTACCGGCCGGATGTGGGTTATGTTCAGGGCATGTCC
TTTATAGCTGCAGTGTTGATCTTGAACCTCGATACTGCAGATGCCTTTATTGCTTTTTCTAATC
TTTTGAATAAACCCTGTCAAATGGCGTTTTTCCGAGTGGACCATGGCCTTATGTTGACTTACTT
TGCTGCATTTGAGGTATTCTTTGAAGAAAACTTGCCGAAATTGTTTGCGCATTTCAAGAAAAAC
AACTTAACTGCAGACATCTACCTAATTGATTGTTCCATCTCTCCCCAGGATTTTTACCTTGTAC
AGTAAGTCCCTGCCCTTGGACTTGGCCTGCCGCATCTGGGATGTATTCTGTCGAGATGGAGAGG
AATTTCTCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTT

hide sequence

RefSeq Acc Id:

XM_006251134 ⟹ XP_006251196

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	78,400,918 - 78,496,863 (+)	NCBI
mRatBN7.2	14	74,176,203 - 74,270,038 (+)	NCBI
Rnor_6.0	14	79,342,918 - 79,436,621 (+)	NCBI
Rnor_5.0	14	78,978,024 - 79,077,775 (+)	NCBI

Sequence:

show sequence

ACTTCCAAGATGGCCGCGGGCGGAGCCGACCAGTTTCTTCTTGGACCAAGATGACTGATGGAAA
CCTTTCCACCTCTATGAATGGTGTAGCATTGATGGGCATTCTAGATGGTCGGCCAGGAGACTCC
CTTCAGGAATTGCAACACCTTAGTATCAAGGCAGTGCCCAGATCCCTTTCAGTGCCTGACTATG
GACCTACACTAAAACTTGGTGCTTTGGAAGATCGACACAGCCTTCAGTCAGTGGACTCGGGCAT
TCCTACCCTGGAGATTGGCAACCCAGAGCCTGTTCCCTGCAGTGTGGTCCATGTGAAGAGAAAG
CAGTCTGAGTCAGAGATCATCCCGGAGCGGGCCTTCCAGAGTGCGTGCCCCTTGCCATCCTGTA
CACCCTCAGCTCCCACTGGCAGCGAACGGGAGCAAGCTGTGCGGAAGTCTTCCACCTTTCCCAG
GACAGGCTATGACTCAGTGAAACTCTACAGCCCCACCTCCAAAGCCTTGAGCCGAAGTGACGAT
GTCTCTGTCTGCAGTGTGTCTAGTCTTGGCACAGAACTGTCAACCACATTGTCGGTTAGCAATG
AGGACATCTTGGACCTCATGGTCACGAGCAATTCCAGTGCCATTGTGACGCTGGAGAACGATGA
TGACCCCCAGTTTACTGATGTCACCCTGAGCTCCATCAAGGAAACCAGTGACTTACACCAGCAG
GATTGTGTTGCTGAGACTGAGGAGGGGAGGAAATTGAGGCTATTGCAACCATTCAGCCACTTCT
TCACAAGGAATTTGCTTGCTAGAAAGCAAAATGCAAGACTTGATAGACAGAGAGATTTGGGATG
GAAGCTGTTTGGAAAAGTCCCACTCCGAGAGACTGCTCAGAAAGATTCAAAGAAAACACAAAAG
GAATATGAAGACAAGGCTGGAAGACCAAGCAGGCCGCCCTCTCCAAAGCAGAATGTGAGGAAGA
ACCTGGATTTTGAGCCACTGTCCACCACAGCGCTCATCCTTGAGGACAGACCCGCGAATCTCCC
AGCAAAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAGTATGAAGAGATGGTGGTGCAGGCT
AAGAAACGAGAGCTTAAAGAAGCCCAGCGGCGGAAGAAACAGCTGGAGGAAAGGTGCAAGGTTG
AAGAGAGCATTGGAAACGCCGTCCTCACCTGGAATAATGAGATCTTGCCTAACTGGGAAACCAT
GTGGTGCTCTAAGAAGGTTCGAGACTTGTGGTGGCAGGGAATCCCTCCGAGTGTAAGAGGCAAA
GTTTGGAGCTTGGCCATTGGCAACGAGCTGAACATCACTCACGAGCTCTTTGACATCTGTCTTG
CTCGGGCCAAGGAGCGGTGGCGGTCCCTCAGCACTGGAGGCTCAGAAGTGGAGAATGAAGATGC
TGGGTTTTCAGCAGCAGACAGAGAGGCCAGTCTGGAGCTTATTAAACTGGACATTTCTAGAACA
TTTCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCATATCATGACATGTTGCACAGTATTTTGG
GCGCTTATACTTGTTACCGGCCGGATGTGGGTTATGTTCAGGGCATGTCCTTTATAGCTGCAGT
GTTGATCTTGAACCTCGATACTGCAGATGCCTTTATTGCTTTTTCTAATCTTTTGAATAAACCC
TGTCAAATGGCGTTTTTCCGAGTGGACCATGGCCTTATGTTGACTTACTTTGCTGCATTTGAGG
TATTCTTTGAAGAAAACTTGCCGAAATTGTTTGCGCATTTCAAGAAAAACAACTTAACTGCAGA
CATCTACCTAATTGATTGGATTTTTACCTTGTACAGTAAGTCCCTGCCCTTGGACTTGGCCTGC
CGCATCTGGGATGTATTCTGTCGAGATGGAGAGGAATTTCTCTTCCGCACAGCTCTGGGCATCC
TGAAGCTTTTTGAGGATATCCTGACCAGGATGGACTTCATCCACAGTGCCCAGTTTCTGACCAG
GCTGCCTGAGGACCTGCCAGCAGACGACGTGTTCGCAGCTATCTCTACAGTCCAGATGCAAAGC
CGCAACAAGAAATGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGAAATGGAGAAAG
GAAGCCCATCACTCAGACACTGAGGCTCAGGGCTAACTCCCACCTGCCACTACAGCAGAGCTCG
ACATGGACCTGTGTGCTTTCAGACTGAAGCCTGGCATGAACAGGGCTCTTTCCATGTTGGCTTT
CTGATGCTCAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCA
GTGGACCCATGCACTGTCATTGGTCATGGCTAGCCGCTGCATTTTCTACATGGGTTCAAGAAAG
GGCAGGCTGTCTCTGAACCTTTATTCCAGCAACAGTCAATTAAATTGTAATGCTATTATGCCAA

hide sequence

RefSeq Acc Id:

XM_008770325 ⟹ XP_008768547

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	78,413,814 - 78,496,863 (+)	NCBI
mRatBN7.2	14	74,189,143 - 74,270,038 (+)	NCBI
Rnor_6.0	14	79,355,775 - 79,436,621 (+)	NCBI

Sequence:

show sequence

GATTGTGTTGCTGAGACTGAGGAGGGGAGGAAATTGAGGCTATTGCAACCATTCAGCCACTTCT
TCACAAGGAATATGAAGACAAGGCTGGAAGACCAAGCAGGCCGCCCTCTCCAAAGCAGAATGTG
AGGAAGAACCTGGATTTTGAGCCACTGTCCACCACAGCGCTCATCCTTGAGGACAGACCCGCGA
ATCTCCCAGCAAAGCCAGCTGAAGAAGCTCAAAAGCACAGACAGCAGTATGAAGAGATGGTGGT
GCAGGCTAAGAAACGAGAGCTTAAAGAAGCCCAGCGGCGGAAGAAACAGCTGGAGGAAAGGTGC
AAGGTTGAAGAGAGCATTGGAAACGCCGTCCTCACCTGGAATAATGAGATCTTGCCTAACTGGG
AAACCATGTGGTGCTCTAAGAAGGTTCGAGACTTGTGGTGGCAGGGAATCCCTCCGAGTGTAAG
AGGCAAAGTTTGGAGCTTGGCCATTGGCAACGAGCTGAACATCACTCACGAGCTCTTTGACATC
TGTCTTGCTCGGGCCAAGGAGCGGTGGCGGTCCCTCAGCACTGGAGGCTCAGAAGTGGAGAATG
AAGATGCTGGGTTTTCAGCAGCAGACAGAGAGGCCAGTCTGGAGCTTATTAAACTGGACATTTC
TAGAACATTTCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCATATCATGACATGTTGCACAGT
ATTTTGGGCGCTTATACTTGTTACCGGCCGGATGTGGGTTATGTTCAGGGCATGTCCTTTATAG
CTGCAGTGTTGATCTTGAACCTCGATACTGCAGATGCCTTTATTGCTTTTTCTAATCTTTTGAA
TAAACCCTGTCAAATGGCGTTTTTCCGAGTGGACCATGGCCTTATGTTGACTTACTTTGCTGCA
TTTGAGGTATTCTTTGAAGAAAACTTGCCGAAATTGTTTGCGCATTTCAAGAAAAACAACTTAA
CTGCAGACATCTACCTAATTGATTGGATTTTTACCTTGTACAGTAAGTCCCTGCCCTTGGACTT
GGCCTGCCGCATCTGGGATGTATTCTGTCGAGATGGAGAGGAATTTCTCTTCCGCACAGCTCTG
GGCATCCTGAAGCTTTTTGAGGATATCCTGACCAGGATGGACTTCATCCACAGTGCCCAGTTTC
TGACCAGGCTGCCTGAGGACCTGCCAGCAGACGACGTGTTCGCAGCTATCTCTACAGTCCAGAT
GCAAAGCCGCAACAAGAAATGGGCACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGAAATG
GAGAAAGGAAGCCCATCACTCAGACACTGAGGCTCAGGGCTAACTCCCACCTGCCACTACAGCA
GAGCTCGACATGGACCTGTGTGCTTTCAGACTGAAGCCTGGCATGAACAGGGCTCTTTCCATGT
TGGCTTTCTGATGCTCAAGTTGGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAG
CAGCTCAGTGGACCCATGCACTGTCATTGGTCATGGCTAGCCGCTGCATTTTCTACATGGGTTC
AAGAAAGGGCAGGCTGTCTCTGAACCTTTATTCCAGCAACAGTCAATTAAATTGTAATGCTATT
ATGCCAA

hide sequence

RefSeq Acc Id:

XM_008770326 ⟹ XP_008768548

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	78,460,164 - 78,496,863 (+)	NCBI
mRatBN7.2	14	74,233,784 - 74,270,038 (+)	NCBI
Rnor_6.0	14	79,401,974 - 79,436,621 (+)	NCBI

Sequence:

show sequence

CTTATGCGGGTCTGCCGCCCAGCTTGGCCTTCACTAGAGTCTCGGCCTGCCCTTCAAGGCCTGC
TTGGTCCTGTGCGCGGTGTGTGCGGCTGTGTGCTGTAAGCCTGAGTGCAGGAATATGAAGACAA
GGCTGGAAGACCAAGCAGGCCGCCCTCTCCAAAGCAGAATGTGAGGAAGAACCTGGATTTTGAG
CCACTGTCCACCACAGCGCTCATCCTTGAGGACAGACCCGCGAATCTCCCAGCAAAGCCAGCTG
AAGAAGCTCAAAAGCACAGACAGCAGTATGAAGAGATGGTGGTGCAGGCTAAGAAACGAGAGCT
TAAAGAAGCCCAGCGGCGGAAGAAACAGCTGGAGGAAAGGTGCAAGGTTGAAGAGAGCATTGGA
AACGCCGTCCTCACCTGGAATAATGAGATCTTGCCTAACTGGGAAACCATGTGGTGCTCTAAGA
AGGTTCGAGACTTGTGGTGGCAGGGAATCCCTCCGAGTGTAAGAGGCAAAGTTTGGAGCTTGGC
CATTGGCAACGAGCTGAACATCACTCACGAGCTCTTTGACATCTGTCTTGCTCGGGCCAAGGAG
CGGTGGCGGTCCCTCAGCACTGGAGGCTCAGAAGTGGAGAATGAAGATGCTGGGTTTTCAGCAG
CAGACAGAGAGGCCAGTCTGGAGCTTATTAAACTGGACATTTCTAGAACATTTCCTAATCTCTG
CATTTTCCAGCAAGGTGGTCCATATCATGACATGTTGCACAGTATTTTGGGCGCTTATACTTGT
TACCGGCCGGATGTGGGTTATGTTCAGGGCATGTCCTTTATAGCTGCAGTGTTGATCTTGAACC
TCGATACTGCAGATGCCTTTATTGCTTTTTCTAATCTTTTGAATAAACCCTGTCAAATGGCGTT
TTTCCGAGTGGACCATGGCCTTATGTTGACTTACTTTGCTGCATTTGAGGTATTCTTTGAAGAA
AACTTGCCGAAATTGTTTGCGCATTTCAAGAAAAACAACTTAACTGCAGACATCTACCTAATTG
ATTGGATTTTTACCTTGTACAGTAAGTCCCTGCCCTTGGACTTGGCCTGCCGCATCTGGGATGT
ATTCTGTCGAGATGGAGAGGAATTTCTCTTCCGCACAGCTCTGGGCATCCTGAAGCTTTTTGAG
GATATCCTGACCAGGATGGACTTCATCCACAGTGCCCAGTTTCTGACCAGGCTGCCTGAGGACC
TGCCAGCAGACGACGTGTTCGCAGCTATCTCTACAGTCCAGATGCAAAGCCGCAACAAGAAATG
GGCACAGGTGCTGTCTGCACTGCAGAAAGACAGCCGGGAAATGGAGAAAGGAAGCCCATCACTC
AGACACTGAGGCTCAGGGCTAACTCCCACCTGCCACTACAGCAGAGCTCGACATGGACCTGTGT
GCTTTCAGACTGAAGCCTGGCATGAACAGGGCTCTTTCCATGTTGGCTTTCTGATGCTCAAGTT
GGCCTTACAACAAAACAGAATTACATCCAGGTTTAGCCTTAAGCAGCTCAGTGGACCCATGCAC
TGTCATTGGTCATGGCTAGCCGCTGCATTTTCTACATGGGTTCAAGAAAGGGCAGGCTGTCTCT
GAACCTTTATTCCAGCAACAGTCAATTAAATTGTAATGCTATTATGCCAA

hide sequence

RefSeq Acc Id:

XM_039092194 ⟹ XP_038948122

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	78,397,345 - 78,496,863 (+)	NCBI
mRatBN7.2	14	74,172,652 - 74,270,038 (+)	NCBI

RefSeq Acc Id:

XM_063273358 ⟹ XP_063129428

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	78,397,345 - 78,496,863 (+)	NCBI

RefSeq Acc Id:

XM_063273359 ⟹ XP_063129429

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	78,400,918 - 78,496,863 (+)	NCBI

RefSeq Acc Id:

XM_063273360 ⟹ XP_063129430

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	78,456,903 - 78,496,863 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001012152	(Get FASTA)	NCBI Sequence Viewer
	NP_001029193	(Get FASTA)	NCBI Sequence Viewer
	NP_001106836	(Get FASTA)	NCBI Sequence Viewer
	XP_006251195	(Get FASTA)	NCBI Sequence Viewer
	XP_006251196	(Get FASTA)	NCBI Sequence Viewer
	XP_008768547	(Get FASTA)	NCBI Sequence Viewer
	XP_008768548	(Get FASTA)	NCBI Sequence Viewer
	XP_038948122	(Get FASTA)	NCBI Sequence Viewer
	XP_063129428	(Get FASTA)	NCBI Sequence Viewer
	XP_063129429	(Get FASTA)	NCBI Sequence Viewer
	XP_063129430	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH99760	(Get FASTA)	NCBI Sequence Viewer
	BAD23893	(Get FASTA)	NCBI Sequence Viewer
	BAD91010	(Get FASTA)	NCBI Sequence Viewer
	EDM00044	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000055215
	ENSRNOP00000055215.2
	ENSRNOP00000072277
	ENSRNOP00000072277.1
	ENSRNOP00000074160
	ENSRNOP00000074160.2
	ENSRNOP00000075351
	ENSRNOP00000075351.2
	ENSRNOP00000081599.1
GenBank Protein	Q5CD77	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001029193 ⟸ NM_001034021
- Peptide Label:	isoform 2
- UniProtKB:	Q6I7R4 (UniProtKB/Swiss-Prot), Q499U3 (UniProtKB/Swiss-Prot), Q5CD77 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MTDGNLSTSMNGVALMGILDGRPGDSLQELQHLSIKAVPRSLSVPDYGPTLKLGALEDRHSLQS VDSGIPTLEIGNPEPVPCSVVHVKRKQSESEIIPERAFQSACPLPSCTPSAPTGSEREQAVRKS STFPRTGYDSVKLYSPTSKALSRSDDVSVCSVSSLGTELSTTLSVSNEDILDLMVTSNSSAIVT LENDDDPQFTDVTLSSIKETSDLHQQDCVAETEEGRKLRLLQPFSHFFTRNLLARKQNARLDRQ RDLGWKLFGKVPLRETAQKDSKKTQKEYEDKAGRPSRPPSPKQNVRKNLDFEPLSTTALILEDR PANLPAKPAEEAQKHRQQYEEMVVQAKKRELKEAQRRKKQLEERCKVEESIGNAVLTWNNEILP NWETMWCSKKVRDLWWQGIPPSVRGKVWSLAIGNELNITHELFDICLARAKERWRSLSTGGSEV ENEDAGFSAADREASLELIKLDISRTFPNLCIFQQGGPYHDMLHSILGAYTCYRPDVGYVQGMS FIAAVLILNLDTADAFIAFSNLLNKPCQMAFFRVDHGLMLTYFAAFEVFFEENLPKLFAHFKKN NLTADIYLIDWIFTLYSKSLPLDLACRIWDVFCRDGEEFLFRTALGILKLFEDILTRMDFIHSA QFLTRLPEDLPADDVFAAISTVQMQSRNKKWAQVLSALQKDSREMEKGSPSLRH hide sequence

RefSeq Acc Id:	NP_001012152 ⟸ NM_001012152
- Peptide Label:	isoform 1
- UniProtKB:	A0A0G2K2K3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEYEDKAGRPSRPPSPKQNVRKNLDFEPLSTTALILEDRPANLPAKPAEEAQKHRQQYEEMVVQ AKKRELKEAQRRKKQLEERCKVEESIGNAVLTWNNEILPNWETMWCSKKVRDLWWQGIPPSVRG KVWSLAIGNELNITHELFDICLARAKERWRSLSTGGSEVENEDAGFSAADREASLELIKLDISR TFPNLCIFQQGGPYHDMLHSILGAYTCYRPDVGYVQGMSFIAAVLILNLDTADAFIAFSNLLNK PCQMAFFRVDHGLMLTYFAAFEVFFEENLPKLFAHFKKNNLTADIYLIDWIFTLYSKSLPLDLA CRIWDVFCRDGEEFLFRTALGILKLFEDILTRMDFIHSAQFLTRLPEDLPADDVFAAISTVQMQ SRNKKWAQVLSALQKDSREMEKGSPSLRH hide sequence

RefSeq Acc Id:	NP_001106836 ⟸ NM_001113365
- Peptide Label:	isoform 3
- UniProtKB:	G3V9P9 (UniProtKB/TrEMBL), A6IJY0 (UniProtKB/TrEMBL), A0A0G2K7D5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRLYLDRFWGLMVKVSSWTKMTDGNLSTSMNGVALMGILDGRPGDSLQELQHLSIKAVPRSLSV PDYGPTLKLGALEDRHSLQSVDSGIPTLEIGNPEPVPCSVVHVKRKQSESEIIPERAFQSACPL PSCTPSAPTGSEREQAVRKSSTFPRTGYDSVKLYSPTSKALSRSDDVSVCSVSSLGTELSTTLS VSNEDILDLMVTSNSSAIVTLENDDDPQFTDVTLSSIKETSDLHQQDCVAETEEGRKLRLLQPF SHFFTRNLLARKQNARLDRQRDLGWKLFGKVPLRETAQKDSKKTQKEYEDKAGRPSRPPSPKQN VRKNLDFEPLSTTALILEDRPANLPAKPAEEAQKHRQQYEEMVVQAKKRELKEAQRRKKQLEER CKVEESIGNAVLTWNNEILPNWETMWCSKKVRDLWWQGIPPSVRGKVWSLAIGNELNITHELFD ICLARAKERWRSLSTGGSEVENEDAGFSAADREASLELIKLDISRTFPNLCIFQQGGPYHDMLH SILGAYTCYRPDVGYVQGMSFIAAVLILNLDTADAFIAFSNLLNKPCQMAFFRVDHGLMLTYFA AFEVFFEENLPKLFAHFKKNNLTADIYLIDWIFTLYSKSLPLDLACRIWDVFCRDGEEFLFRTA LGILKLFEDILTRMDFIHSAQFLTRLPEDLPADDVFAAISTVQMQSRNKKWAQVLSALQKDSRE MEKGSPSLRH hide sequence

RefSeq Acc Id:	XP_006251195 ⟸ XM_006251133
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2K7D5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRLYLDRFWGLMVKVSSWTKMTDGNLSTSMNGVALMGILDGRPGDSLQELQHLSIKAVPRSLSV PDYGPTLKLGALEDRHSLQSVDSGIPTLEIGNPEPVPCSVVHVKRKQSESEIIPERAFQSACPL PSCTPSAPTGSEREQAVRKSSTFPRTGYDSVKLYSPTSKALSRSDDVSVCSVSSLGTELSTTLS VSNEDILDLMVTSNSSAIVTLENDDDPQFTDVTLSSIKETSDLHQQDCVAETEEGRKLRLLQPF SHFFTRNLLARKQNARLDRQRDLGWKLFGKVPLRETAQKDSKKTQKEYEDKAGRPSRPPSPKQN VRKNLDFEPLSTTALILEDRPANLPAKPAEEAQKHRQQYEEMVVQAKKRELKEAQRRKKQLEER CKVEESIGNAVLTWNNEILPNWETMWCSKKVRDLWWQGIPPSVRGKVWSLAIGNELNITHELFD ICLARAKERWRSLSTGGSEVENEDAGFSAADREASLELIKLDISRTFPNLCIFQQGGPYHDMLH SILGAYTCYRPDVGYVQGMSFIAAVLILNLDTADAFIAFSNLLNKPCQMAFFRVDHGLMLTYFA AFEVFFEENLPKLFAHFKKNNLTADIYLIDCSISPQDFYLVQ hide sequence

RefSeq Acc Id:	XP_006251196 ⟸ XM_006251134
- Peptide Label:	isoform X2
- UniProtKB:	Q6I7R4 (UniProtKB/Swiss-Prot), Q5CD77 (UniProtKB/Swiss-Prot), Q499U3 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MTDGNLSTSMNGVALMGILDGRPGDSLQELQHLSIKAVPRSLSVPDYGPTLKLGALEDRHSLQS VDSGIPTLEIGNPEPVPCSVVHVKRKQSESEIIPERAFQSACPLPSCTPSAPTGSEREQAVRKS STFPRTGYDSVKLYSPTSKALSRSDDVSVCSVSSLGTELSTTLSVSNEDILDLMVTSNSSAIVT LENDDDPQFTDVTLSSIKETSDLHQQDCVAETEEGRKLRLLQPFSHFFTRNLLARKQNARLDRQ RDLGWKLFGKVPLRETAQKDSKKTQKEYEDKAGRPSRPPSPKQNVRKNLDFEPLSTTALILEDR PANLPAKPAEEAQKHRQQYEEMVVQAKKRELKEAQRRKKQLEERCKVEESIGNAVLTWNNEILP NWETMWCSKKVRDLWWQGIPPSVRGKVWSLAIGNELNITHELFDICLARAKERWRSLSTGGSEV ENEDAGFSAADREASLELIKLDISRTFPNLCIFQQGGPYHDMLHSILGAYTCYRPDVGYVQGMS FIAAVLILNLDTADAFIAFSNLLNKPCQMAFFRVDHGLMLTYFAAFEVFFEENLPKLFAHFKKN NLTADIYLIDWIFTLYSKSLPLDLACRIWDVFCRDGEEFLFRTALGILKLFEDILTRMDFIHSA QFLTRLPEDLPADDVFAAISTVQMQSRNKKWAQVLSALQKDSREMEKGSPSLRH hide sequence

RefSeq Acc Id:

XP_008768547 ⟸ XM_008770325

- Peptide Label:

isoform X7

- Sequence:

show sequence

MVVQAKKRELKEAQRRKKQLEERCKVEESIGNAVLTWNNEILPNWETMWCSKKVRDLWWQGIPP
SVRGKVWSLAIGNELNITHELFDICLARAKERWRSLSTGGSEVENEDAGFSAADREASLELIKL
DISRTFPNLCIFQQGGPYHDMLHSILGAYTCYRPDVGYVQGMSFIAAVLILNLDTADAFIAFSN
LLNKPCQMAFFRVDHGLMLTYFAAFEVFFEENLPKLFAHFKKNNLTADIYLIDWIFTLYSKSLP
LDLACRIWDVFCRDGEEFLFRTALGILKLFEDILTRMDFIHSAQFLTRLPEDLPADDVFAAIST
VQMQSRNKKWAQVLSALQKDSREMEKGSPSLRH

hide sequence

RefSeq Acc Id:

XP_008768548 ⟸ XM_008770326

- Peptide Label:

isoform X7

- Sequence:

show sequence

MVVQAKKRELKEAQRRKKQLEERCKVEESIGNAVLTWNNEILPNWETMWCSKKVRDLWWQGIPP
SVRGKVWSLAIGNELNITHELFDICLARAKERWRSLSTGGSEVENEDAGFSAADREASLELIKL
DISRTFPNLCIFQQGGPYHDMLHSILGAYTCYRPDVGYVQGMSFIAAVLILNLDTADAFIAFSN
LLNKPCQMAFFRVDHGLMLTYFAAFEVFFEENLPKLFAHFKKNNLTADIYLIDWIFTLYSKSLP
LDLACRIWDVFCRDGEEFLFRTALGILKLFEDILTRMDFIHSAQFLTRLPEDLPADDVFAAIST
VQMQSRNKKWAQVLSALQKDSREMEKGSPSLRH

hide sequence

RefSeq Acc Id:

ENSRNOP00000072277 ⟸ ENSRNOT00000082704

RefSeq Acc Id:

ENSRNOP00000075351 ⟸ ENSRNOT00000085534

RefSeq Acc Id:

ENSRNOP00000074160 ⟸ ENSRNOT00000077846

RefSeq Acc Id:

ENSRNOP00000055215 ⟸ ENSRNOT00000058414

RefSeq Acc Id:	XP_038948122 ⟸ XM_039092194
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K7D5 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSRNOP00000081599 ⟸ ENSRNOT00000094036

RefSeq Acc Id:	XP_063129428 ⟸ XM_063273358
- Peptide Label:	isoform X1
- UniProtKB:	A6IJY0 (UniProtKB/TrEMBL), G3V9P9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063129429 ⟸ XM_063273359
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063129430 ⟸ XM_063273360
- Peptide Label:	isoform X6

Protein Domains

Rab-GAP TBC

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5CD77-F1-model_v2	AlphaFold	Q5CD77	1-694	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13699380

Promoter ID:

EPDNEW_R9905

Type:

initiation region

Name:

Tbc1d14_2

Description:

TBC1 domain family, member 14

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_R9906

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	14	79,343,486 - 79,343,546	EPDNEW

RGD ID:

13699381

Promoter ID:

EPDNEW_R9906

Type:

initiation region

Name:

Tbc1d14_1

Description:

TBC1 domain family, member 14

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_R9905

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	14	79,401,842 - 79,401,902	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309993	AgrOrtholog
Ensembl Genes	ENSRNOG00000006400	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000058414	ENTREZGENE
	ENSRNOT00000058414.4	UniProtKB/TrEMBL
	ENSRNOT00000077846	ENTREZGENE
	ENSRNOT00000077846.2	UniProtKB/TrEMBL
	ENSRNOT00000082704	ENTREZGENE
	ENSRNOT00000082704.2	UniProtKB/TrEMBL
	ENSRNOT00000085534.2	UniProtKB/TrEMBL
	ENSRNOT00000094036.1	UniProtKB/TrEMBL
Gene3D-CATH	putative rabgap domain of human tbc1 domain family member 14 like domains	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ypt/Rab-GAP domain of gyp1p, domain 1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ypt/Rab-GAP domain of gyp1p, domain 3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7930485	IMAGE-MGC_LOAD
InterPro	Rab-GTPase-TBC_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Rab-GTPase_TBC_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:360956	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:124676	IMAGE-MGC_LOAD
NCBI Gene	360956	ENTREZGENE
PANTHER	RAB GTPASE-ACTIVATING PROTEIN 1-LIKE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TBC1 DOMAIN FAMILY MEMBER 12 ISOFORM X1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	RabGAP-TBC	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Tbc1d14	PhenoGen
PROSITE	TBC_RABGAP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000006400	RatGTEx
SMART	TBC	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF47923	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A0G2K2K3	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2K7D5	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2KAD0_RAT	UniProtKB/TrEMBL
	A0A8I5ZS03_RAT	UniProtKB/TrEMBL
	A6IJY0	ENTREZGENE, UniProtKB/TrEMBL
	G3V9P9	ENTREZGENE, UniProtKB/TrEMBL
	Q499U3	ENTREZGENE
	Q5CD77	ENTREZGENE
	Q6I7R4	ENTREZGENE
	TBC14_RAT	UniProtKB/Swiss-Prot
UniProt Secondary	Q499U3	UniProtKB/Swiss-Prot
	Q6I7R4	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-12-06	Tbc1d14	TBC1 domain family, member 14	Tbc1d14_predicted	TBC1 domain family, member 14 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Tbc1d14_predicted	TBC1 domain family, member 14 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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