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Gene: Dixdc1 (DIX domain containing 1) Rattus norvegicus

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Symbol:

Dixdc1

Name:

DIX domain containing 1

RGD ID:

1309902

Description:

Enables mitogen-activated protein kinase kinase kinase binding activity. Involved in cerebellar cortex development; positive regulation of JNK cascade; and positive regulation of axonogenesis. Located in axon terminus and neuronal cell body. Part of protein-containing complex. Orthologous to human DIXDC1 (DIX domain containing 1); INTERACTS WITH 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 1,3-dinitrobenzene; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Ccd1; coiled-coil protein DIX1; coiled-coil-DIX1; DIX domain-containing protein 1; dixin; LOC363062

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DIXDC1 (DIX domain containing 1)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB
Mus musculus (house mouse):	Dixdc1 (DIX domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dixdc1 (DIX domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DIXDC1 (DIX domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DIXDC1 (DIX domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Dixdc1 (DIX domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DIXDC1 (DIX domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DIXDC1 (DIX domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dixdc1 (DIX domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Dixdc1 (DIX domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	DIXDC1 (DIX domain containing 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	DIXDC1 (DIX domain containing 1)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Dixdc1 (DIX domain containing 1)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	dixdc1a (DIX domain containing 1a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	dixdc1b (DIX domain containing 1b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	dixdc1b (DIX domain containing 1b)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	dixdc1	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	dixdc1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	59,904,218 - 59,977,595 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	59,904,218 - 59,978,447 (-)	Ensembl				GRCr8
mRatBN7.2	8	51,007,835 - 51,081,191 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	51,007,838 - 51,081,090 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	56,513,683 - 56,575,716 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	54,792,617 - 54,854,647 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	52,656,859 - 52,718,900 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	55,091,232 - 55,164,636 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	55,091,235 - 55,162,421 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	53,688,638 - 53,761,215 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	54,018,179 - 54,073,235 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	50,555,793 - 50,608,269 (-)	NCBI		Celera
RGSC_v3.1	8	54,040,712 - 54,112,412 (-)	NCBI
Cytogenetic Map	8	q23	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

anxiety disorder (ISO)

autistic disorder (ISO)

bipolar disorder (ISO)

depressive disorder (ISO)

obesity (ISO)

schizophrenia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane (EXP)

1,1-dichloroethene (ISO)

1,3-dinitrobenzene (EXP)

15-acetyldeoxynivalenol (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,3',5,5'-tetrabromobisphenol A (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

afimoxifene (ISO)

aflatoxin B1 (EXP)

Aflatoxin B2 alpha (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

cadmium atom (EXP)

cadmium dichloride (EXP)

carbon nanotube (ISO)

CGP 52608 (ISO)

chrysene (ISO)

ciguatoxin CTX1B (ISO)

cobalt dichloride (EXP,ISO)

coumarin (ISO)

coumestrol (ISO)

crocidolite asbestos (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP)

dioxygen (ISO)

ethanol (ISO)

fulvestrant (ISO)

isoprenaline (ISO)

isotretinoin (ISO)

leflunomide (ISO)

Licochalcone B (ISO)

mercury dichloride (ISO)

methoxychlor (EXP)

methyl methanesulfonate (ISO)

methylseleninic acid (ISO)

nickel atom (ISO)

ozone (ISO)

paracetamol (ISO)

perfluorooctanoic acid (EXP)

phenobarbital (ISO)

piperonyl butoxide (EXP)

pirinixic acid (EXP)

potassium chromate (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

tetrachloromethane (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

tremolite asbestos (ISO)

trichostatin A (ISO)

triclosan (ISO)

triphenyl phosphate (ISO)

Triptolide (ISO)

triptonide (ISO)

tris(2-butoxyethyl) phosphate (ISO)

troglitazone (ISO)

trovafloxacin (ISO)

uranium atom (ISO)

valproic acid (EXP,ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

canonical Wnt signaling pathway (IBA,IEA,ISO,ISS)

cell proliferation in forebrain (IEA,ISO)

cerebellar cortex development (IMP)

cerebral cortex cell migration (IEA,ISO)

cerebral cortex radially oriented cell migration (IEA,ISO)

forebrain ventricular zone progenitor cell division (IEA,ISO)

modification of postsynaptic actin cytoskeleton (IEA,ISO)

negative regulation of neuron differentiation (IEA,ISO)

positive regulation of axonogenesis (IMP)

positive regulation of JNK cascade (IMP)

positive regulation of Wnt signaling pathway (IEA,ISO)

regulation of actin cytoskeleton organization (IEA,ISO)

regulation of microtubule cytoskeleton organization (IEA,ISO)

Wnt signaling pathway (IEA)

Cellular Component

axon terminus (IDA)

cytoplasm (IEA)

cytosol (IBA,IEA,ISO,ISS)

focal adhesion (IEA)

glutamatergic synapse (IEA,ISO)

neuronal cell body (IDA)

postsynapse (IEA,ISO)

protein-containing complex (IDA)

stress fiber (IEA)

Molecular Function

actin binding (IEA)

gamma-tubulin binding (IEA,ISO,ISS)

mitogen-activated protein kinase kinase kinase binding (IDA)

protein binding (ISO)

protein domain specific binding (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	A SnoN-Ccd1 pathway promotes axonal morphogenesis in the mammalian brain.	Ikeuchi Y, etal., J Neurosci. 2009 Apr 1;29(13):4312-21.
3.	GOA pipeline	RGD automated data pipeline
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:15579909	PMID:17554179	PMID:19375513	PMID:20624590	PMID:21189423	PMID:27521891	PMID:27873129

Genomics

Comparative Map Data

Dixdc1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	59,904,218 - 59,977,595 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	59,904,218 - 59,978,447 (-)	Ensembl				GRCr8
mRatBN7.2	8	51,007,835 - 51,081,191 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	51,007,838 - 51,081,090 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	56,513,683 - 56,575,716 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	54,792,617 - 54,854,647 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	52,656,859 - 52,718,900 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	55,091,232 - 55,164,636 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	55,091,235 - 55,162,421 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	53,688,638 - 53,761,215 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	54,018,179 - 54,073,235 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	50,555,793 - 50,608,269 (-)	NCBI		Celera
RGSC_v3.1	8	54,040,712 - 54,112,412 (-)	NCBI
Cytogenetic Map	8	q23	NCBI

DIXDC1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	111,927,315 - 112,022,653 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	111,927,144 - 112,022,653 (+)	Ensembl			hg38	GRCh38
GRCh37	11	111,798,039 - 111,893,377 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	111,313,137 - 111,398,518 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	11	111,353,285 - 111,397,913	NCBI
Celera	11	108,961,135 - 109,046,522 (+)	NCBI		Celera
Cytogenetic Map	11	q23.1	NCBI
HuRef	11	107,721,826 - 107,817,397 (+)	NCBI		HuRef
CHM1_1	11	111,680,944 - 111,776,629 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	111,937,556 - 112,032,895 (+)	NCBI		T2T-CHM13v2.0

Dixdc1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	50,574,052 - 50,650,900 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	50,574,052 - 50,650,817 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	50,662,752 - 50,739,602 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	50,662,752 - 50,739,517 (-)	Ensembl			mm10	GRCm38
MGSCv37	9	50,470,857 - 50,536,089 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	50,414,982 - 50,480,205 (-)	NCBI		MGSCv36	mm8
Celera	9	47,949,270 - 48,015,116 (-)	NCBI		Celera
Cytogenetic Map	9	A5.3	NCBI
cM Map	9	27.75	NCBI

Dixdc1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	13,642,078 - 13,711,850 (+)	Ensembl
ChiLan1.0	NW_004955412	13,640,693 - 13,713,926 (+)	NCBI	ChiLan1.0	ChiLan1.0

DIXDC1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	112,677,661 - 112,773,164 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	113,771,936 - 113,865,921 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	106,813,905 - 106,908,898 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	110,657,803 - 110,753,119 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	110,657,803 - 110,753,114 (+)	Ensembl			panPan2	panpan1.1

DIXDC1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	21,097,000 - 21,168,470 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	21,100,045 - 21,167,166 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	21,019,330 - 21,090,701 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	21,119,943 - 21,191,396 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	21,119,955 - 21,190,088 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	21,181,292 - 21,252,715 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	21,081,791 - 21,153,169 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	21,130,502 - 21,201,971 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Dixdc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	94,186,983 - 94,265,252 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936612	2,443,525 - 2,517,114 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936612	2,440,357 - 2,518,596 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DIXDC1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	9	39,666,454 - 39,734,909 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	44,446,249 - 44,526,107 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DIXDC1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	103,276,780 - 103,377,110 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	103,286,346 - 103,378,387 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666043	22,605,417 - 22,704,493 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dixdc1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624784	7,094,736 - 7,175,072 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624784	7,093,457 - 7,178,448 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Dixdc1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	45,133,749 - 45,203,267 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Dixdc1
516 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	354
Count of miRNA genes:	227
Interacting mature miRNAs:	265
Transcripts:	ENSRNOT00000039045
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2313057	Bss76	Bone structure and strength QTL 76	3	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	8	39106258	91341052	Rat
1298065	Scl16	Serum cholesterol level QTL 16	3.8		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39752803	84752803	Rat
1549908	Neudeg1	Neurodegradation QTL 1	5.5	0	nervous system integrity trait (VT:0010566)	logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count (CMO:0001986)	8	58337123	103337123	Rat
2317030	Wbc5	White blood cell count QTL 5	3.21	0.005	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	8	16994642	61994642	Rat
1554321	Bmd3	Bone mineral density QTL 3	7.9	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	49849908	118871671	Rat
2313067	Bss77	Bone structure and strength QTL 77	3.1	0.0001	tibia size trait (VT:0100001)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	8	39106258	91341052	Rat
1578769	Uae31	Urinary albumin excretion QTL 31	3.3	0.001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	39106363	103375781	Rat
2301416	Bp315	Blood pressure QTL 315		0.008	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	15952279	60952279	Rat
1298079	Activ2	Activity QTL 2	9.5	0.000001	voluntary movement trait (VT:0003491)	rearing measurement (CMO:0001515)	8	50763951	95763951	Rat
11556286	Cm81	Cardiac mass QTL 81		0.01	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	39106258	84106258	Rat
70161	Bp62	Blood pressure QTL 62	2.9	0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	51589699	99045312	Rat
1578765	Klgr1	Kidney lesion grade QTL 1	3.3	0.0001	kidney morphology trait (VT:0002135)	organ lesion measurement (CMO:0000677)	8	39106363	103375781	Rat
2317051	Aia18	Adjuvant induced arthritis QTL 18	2.42		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	8	16994642	61994642	Rat
61464	Niddm11	Non-insulin dependent diabetes mellitus QTL 11	3.1	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	8	44477926	89477926	Rat
4889938	Bss89	Bone structure and strength QTL 89	3.8		tibia size trait (VT:0100001)	tibia cortical bone volume (CMO:0001725)	8	58991697	91341052	Rat
1578755	Pur5	Proteinuria QTL 5	3.3	0.0001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	8	39106258	103375958	Rat
2313086	Bss60	Bone structure and strength QTL 60	4.1	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	8	58991697	91341052	Rat
2313088	Bss75	Bone structure and strength QTL 75	3.1	0.0001	body length (VT:0001256)	body length, nose to rump (CMO:0000079)	8	39106258	91341052	Rat
1358896	Bp262	Blood pressure QTL 262	2.89		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	35464071	107982864	Rat
731182	Uae24	Urinary albumin excretion QTL 24	6.4		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	47541419	92541419	Rat
631648	Stl5	Serum triglyceride level QTL 5	4	0.0003	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	8	35464071	71842899	Rat
724514	Uae15	Urinary albumin excretion QTL 15	2.9		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	37760859	61459705	Rat
61353	Bp35	Blood pressure QTL 35		0.001	arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	8	39106258	84106258	Rat
1331837	Bw23	Body weight QTL 23	4.19	0.00007	body mass (VT:0001259)	body weight (CMO:0000012)	8	55428416	107963099	Rat
631842	Inf1	Infertility severity QTL 1	4.1	0.001	seminal gland mass (VT:0010524)	seminal vesicle wet weight (CMO:0001603)	8	31543661	76543661	Rat
737824	Hcar10	Hepatocarcinoma resistance QTL 10	2.9		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	8	49610204	68373388	Rat
1359033	Bp273	Blood pressure QTL 273			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	39106258	84106258	Rat
1331769	Rf39	Renal function QTL 39	3.871		urine output (VT:0003620)	timed urine volume (CMO:0000260)	8	50763951	107970527	Rat
61358	Bp39	Blood pressure QTL 39	2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	44447837	89447837	Rat
1358906	Bp253	Blood pressure QTL 253	4	0.0004	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	49610204	94610204	Rat
1358907	Cm40	Cardiac mass QTL 40	1.89		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	35464071	107982864	Rat
1598824	Memor4	Memory QTL 4	2.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	8	17993862	62252873	Rat
1331744	Bp217	Blood pressure QTL 217	3.398		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	39106258	67378345	Rat
70197	BpQTLcluster8	Blood pressure QTL cluster 8	3.482		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	55428333	127966348	Rat
2313046	Bss78	Bone structure and strength QTL 78	3.5	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	8	39106258	91341052	Rat
2316950	Scl66	Serum cholesterol level QTL 66	4.1		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39106363	114525825	Rat
1582254	Kidm31	Kidney mass QTL 31	3		kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	8	49245178	94245178	Rat
724540	Uae8	Urinary albumin excretion QTL 8	5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	8	39106258	103375958	Rat
1358892	Kidm26	Kidney mass QTL 26	3.69		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	8	35464071	107982864	Rat
631216	Stl9	Serum triglyceride level QTL 9	4.71	0.0001	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	8	50763951	67219641	Rat
1582243	Bw66	Body weight QTL 66	3.4	0.0048	body mass (VT:0001259)	body weight (CMO:0000012)	8	49245178	94245178	Rat
5684973	Bss100	Bone structure and strength QTL 100	4.7		tibia area (VT:1000281)	tibia area measurement (CMO:0001382)	8	58991697	91341052	Rat
61373	Mcs4	Mammary carcinoma susceptibility QTL 4	1.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	8	44475043	89475043	Rat

Markers in Region

RH139711

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	51,007,856 - 51,008,020 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	55,091,254 - 55,091,417	NCBI	Rnor6.0
Rnor_5.0	8	53,688,660 - 53,688,823	UniSTS	Rnor5.0
RGSC_v3.4	8	54,018,201 - 54,018,364	UniSTS	RGSC3.4
Celera	8	50,555,815 - 50,555,978	UniSTS
RH 3.4 Map	8	548.2	UniSTS
Cytogenetic Map	8	q23	UniSTS

RH128680

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	51,009,346 - 51,009,496 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	55,092,743 - 55,092,892	NCBI	Rnor6.0
Rnor_5.0	8	53,690,149 - 53,690,298	UniSTS	Rnor5.0
RGSC_v3.4	8	54,019,690 - 54,019,839	UniSTS	RGSC3.4
Celera	8	50,557,304 - 50,557,453	UniSTS
RH 3.4 Map	8	545.1	UniSTS
Cytogenetic Map	8	q23	UniSTS

RH137617

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	51,030,952 - 51,031,109 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	55,114,350 - 55,114,506	NCBI	Rnor6.0
Rnor_5.0	8	53,711,756 - 53,711,912	UniSTS	Rnor5.0
RGSC_v3.4	8	54,041,297 - 54,041,453	UniSTS	RGSC3.4
Celera	8	50,578,915 - 50,579,071	UniSTS
Cytogenetic Map	8	q23	UniSTS

RH139339

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	51,009,090 - 51,009,237 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	55,092,488 - 55,092,634	NCBI	Rnor6.0
Rnor_5.0	8	53,689,894 - 53,690,040	UniSTS	Rnor5.0
RGSC_v3.4	8	54,019,435 - 54,019,581	UniSTS	RGSC3.4
Celera	8	50,557,049 - 50,557,195	UniSTS
Cytogenetic Map	8	q23	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	80	59	6	344	180	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001395147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766295	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766296	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595731	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595732	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595733	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039081729	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039081730	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265744	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265746	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC094189	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC132668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY770507	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000039045 ⟹ ENSRNOP00000037500

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	59,904,218 - 59,966,300 (-)	Ensembl
mRatBN7.2 Ensembl	8	51,009,336 - 51,069,883 (-)	Ensembl
Rnor_6.0 Ensembl	8	55,091,235 - 55,144,087 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000083102 ⟹ ENSRNOP00000073690

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	59,904,218 - 59,977,469 (-)	Ensembl
mRatBN7.2 Ensembl	8	51,009,336 - 51,081,090 (-)	Ensembl
Rnor_6.0 Ensembl	8	55,094,514 - 55,162,421 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000100212 ⟹ ENSRNOP00000085938

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	59,904,218 - 59,978,447 (-)	Ensembl
mRatBN7.2 Ensembl	8	51,007,838 - 51,060,690 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109900 ⟹ ENSRNOP00000084790

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	59,916,208 - 59,932,984 (-)	Ensembl
mRatBN7.2 Ensembl	8	51,019,825 - 51,036,839 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000114265 ⟹ ENSRNOP00000095631

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	59,904,221 - 59,957,073 (-)	Ensembl
mRatBN7.2 Ensembl	8	51,007,838 - 51,060,690 (-)	Ensembl

RefSeq Acc Id:

NM_001395147 ⟹ NP_001382076

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	59,904,218 - 59,966,300 (-)	NCBI
mRatBN7.2	8	51,007,835 - 51,069,917 (-)	NCBI

RefSeq Acc Id:

XM_008766295 ⟹ XP_008764517

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	59,904,218 - 59,968,334 (-)	NCBI
mRatBN7.2	8	51,007,835 - 51,070,826 (-)	NCBI
Rnor_6.0	8	55,091,232 - 55,153,671 (-)	NCBI

Sequence:

show sequence

GTGTGTGTGTAACGTGCGTGTATATGCGAGCACGCGCACGGGGACGCCCGCCTCCAAACCTGCA
GTGTAGTGATTGCAAGCATATGGTTAGACTGGCAAACCCGCTTGTGTCAGCGCGGGTGTGTGTG
TGCTCACGCATGTGTGAGTGCTCGCCACGAACCCCAGTGCGGAGCCTGCGTGCGCGCCCACGGC
TTCCCCGCATTCCCTGGCGGCCCGGGGCTGCCTGCGAGCGCCTATCGCCTGTCTGCTCAGCGCG
CGCCCTGCTGTTTCTATAGGAACCAGCACAGCGCCGGGCCCCTTCGGCTGCGGCCCGCGCGCGA
GCATGCCCAGTGCAAGCCGCTAGTTTGGCTCGGGTCTAGGTTTCCAGTAAGTGGCATGCGGGAC
TCCGGAGAGCTCCCAGGGAGCTGAGCCGATCGCCTTTGTGTGCAGAGGGAGGAGGCGGCGGCGC
GACCCCACCCGGGAAGCCCCGCGGCAGGAACAATGCTAGCCTGCTTGACCCGCGGGAACTTACT
GGACGTCCTGCAAGAGGGCTTCAATGAGCAACAGCTACAGGCCTATGTGGCCTGGGTGAATGCC
CAGCTGAAGAAGAGGCCATCCGTGAAGCCTGTGCAGGACCTGCGACAGGATCTCCGAGATGGAG
TAATCCTGGCCTATCTCATCGAGATTGTTGGTGTTGTCGATGTTGTTGTTTTTCTTCTCCTAAC
AGCAGGAGAAAAACTGAGCGGAGTACAGTTGAGTCCTAGTAACCAGCAGGAGATGAAGAGCAAT
GTGGAGAGGGTCCTACAGTTTGTGGCTTCCAAAAATATTCGTATGCACCAGACTTCGGCTAAAG
ATATTGTGGAAGGAAACCTGAAGTCTATCATGAGGCTGGTCCTTGCCTTGGCAGCTCATTTTAA
ACCTGGCTCTAGCAGGACGGTGAGCCAGGGGCGAGACTCCAGAACCTCTGTGCAGAGTCATCAA
CCACACTGTGCCACCGCTGTGGCCCAAGGAGCAGCGGCTGCTCTGGCTGATGTGTGCCATGACG
TGTCACGGTCAGGACGGGATGTCTTCAGATACAGACAGAGGAATGCCAGTGTGGATGAGGAGAT
CGAGAACCCATACTGGAGTGTGCGAGCACTTGTGCAGCAATACGAAGGCCAGCAAAGGTCCCCA
TCTGAGTCCAGCTGCTCCAGTCTGACTTCACCCAGTCCAATTCACAGTGCAAAGAGCGAATCCA
TTATAACCCAGTCAGAGGAAAAGGCCGATTTTGTGATTATTCCCTCTGAAGGAATAGAGAACAG
AACAGACGAGACAGGCTCTCCATTATCCCGAGACTGGAGGCCGGGAAGCCCAGGAACCTACCTG
GAAGCCACATGGGAAGAACAACTGTTGGAGCAACAAGAACACTTGGAAAAAGAAATGGAGGAAG
CCAAGAAAATGATTTCAGGACTACAGGCCTTGCTACTCAATGGCTCTCTACCGGAGGATGAACA
GGAAAGACCGGTGGCCCTCTGTGAACCAGGAGTCAATCCCGAGGAACAGCTGATTATAATCCGA
AGCCGTCTGGATCAAAGTATGGAGGAGAATCAGGACCTTAAGAAAGAACTGCTGAAATGCAAAC
AAGAAGCCAGAAACTTACAGGGGATAAAGGATGCCTTGCAGCAGAGGTTGACTCAGCAGGACAC
GTCCGTTCTTCAGCTCAAGCAAGAGCTGCTGAGGGCAAATATGGATAAGGATGAGCTGCACAAC
CAGAATGTGGATCTGCAGAGGAAGCTTGACGAGAGGAACCGGCTCTTAGGAGAATATAAAAAAG
ATCTGGGACAGAAGGACCGCCTTCTTCAACAGCAGCAGGCCAAGTTGGAAGATGCTCTTCGGAA
ACTCTCAGACGCCAGTTACCAGCAGGTGGATCTAGAACGGGAGCTAGAGCAAAAAGATGTCCTT
CTGGCTCACCGCGTGAAAGGAGACACAGATGAGGTGACAAATTACAACAGTCACAGCTCTCAGC
GCAATGGCTTTGTCCTTCCGGTGGCAGGGAGAGCCGCCACTACTGCCACCCACAGAGGGCCACA
GAGCAGTGACCTCCAGCTCGTCCGAGATGCTCTACGTAGCCTGCGAAACAGCTTCAGTGGTCAT
GACCCTCAGCATCACACCATTGACAGCCTGGAGCAGGGAATCTCTAGCCTCATAGAGCGTCTGC
ATGTCATAGAGACACAGAAGAAACAGGAAAGGAAGGTTCGGGGGCGGTCACCCAGAAATCAAGC
AAGCAGTGAATATCGAGCCTCCTGGCCCCCCAATTCCACGTTGCCTCACTCCCAGAGCTCCCCG
GCCGTCAGCAACACCTGCACTAAAGTGCTCTACTTCACGGACCGCTCACTCACGCCCTTCATGG
TCAATATACCAAAGAGGCTGGGGGAGGTGACACTGAAGGACTTTAAAGCAGCTATTGATCGAGA
AGGGAGTCACCGGTACCACTTCAAAGCACTGGATCCCGAGTTTGGCACTGTCAAAGAGGAGGTT
TTCCATGATGATGATGCCATCCCTGGATGGGAAGGGAAAATCGTAGCCTGGGTAGAAGATCATA
GAGAGAATTAACTGGACCTGGACACTCCCTGGCTGCTTCTCTCAGGAAAGAGGACTAACACCAG
AGGACACTGAGAAGTTTCTAACTCGTGCTGCCAAAAAGAAGCTTCTTCAAGTATGATGGTCACG
GGCCAGTCCTGTTTGTGTGCCTGGCATATCTGGTACTTCAAATCTCTGTCCAAAACATAGGAAT
ATGGGTCCATCTGGAGCTCCTTGTCAGTGGGAACAGTGTTTTCTTCTACTCTGAGGACATCAAA
CCGAAGGCCTTAACCACCAGGGAAGGATGACCCCTCTCTCGTAGGGGCATGGCTGCTATGATCG
GAACCTGGAGTGGAAGCATCAGTCCGTCGGTTGGCCTTGATGGTTGCAGCAATCAGAGCCCAGC
ATTTGTGCTTACAGACAAGGCAGAGGTACCAACTTTGCTGCTTCTTTGCAGACACTGCAAACCA
GGAGTGACTTGTGAGGTGGTACCAAAGATGAGAGCCTAAATGCATAACTGGCCTGGACGTGAAC
GATACTGACTTGTTGACTGGGTGGGGAGAGGGCCGCCCATATTGTGCTATACTACGCCAAAACC
ATAACTCAGACCTTGGGCTGCCTCCTGTTTTTAACTGGCTCTGCAGCTTGTCCTTAGCCCACTG
TGGGCATTTTTCACATGCTGTTGGTTTTCTCTGGGGACTCTTTAACTTTAGAGCCATTTTATTT
TTCTCCAAACAGATAAACCTTGTGTTTGAAAAGGATGAGAGAAGCGAGAGGCTCCTTAAGAATC
CAGGATACAGAAAGGTGCTGTTACCCACATCCCTTGACACGAACTCATGGCATCGCCTTTGCAA
GGAGACAGACCTTTAATTTGTGTTTGTGAGTTGAGTACTGAGCACGACTTACTGGTCTGCCTCT
CCCTTCGCGGCTGGAGTTACTTTCTATTACACATTTAGCTTGGGCTGCTCCCTGAGGGCCATGC
CCAGTGGAACCCTTGGGCACGGAGCGTGAGTGAGTTGTGAATGGCAGGGTTGATTCAAGGTGAA
GTCATTTCTTATTGCAACATTGCCGAGTATGAAGCTAAAGAGTTCAACTTCCAGAGGTTCCTCA
CTAACTTGGGTTTTCTCATTCACTCACCTAGCACCATCTGCCAGTCAGCCATGGTTATCTGTTT
ATACAGTCCCTCAAGCAGTCTGCAACCACACTGTACACTGCCAAACAGAAGAGTGGGACAGAGG
GCTCAGTCTGGGGCCTGCCTGTCTCTGTCTCCCATTTTCAGCCATTTGAACAGCATATTCTTTG
GAACGCTGAGATAACGTCTTATTGTTTTTTATAGACATGTCTTTTAAAAATAGTCCATGTTTGA
GAATTGTTTTGTACTTGTTTGCTTTTGTCTGAGAACCATGTCTATTTTTCTAACTTGAATGACT
TCTGTGTAATCTCACGTTCCCTGTACTCTATCCATTTTCTACAACACCCAGTAGCTTTTCTACC
TTCTCTTCCTACTGCCTCCTGTGGTTTCAGAACAAGCTTTATTTTGTTACGAGTATACTAATGG
CAGTTTGTTCTGTCCAATTCTCCCTGCTTTTAGTGGTGGAGATCTTTTTTATTTTATTTTTTCT
AGTTGATTGCTCTTCTAAAAGACATGAGATCAAAAAGACCTGATGTCTTCCATGCACACTACCC
TGGTCTTCTTTTGAAGAACAATTTTTCATCAGCTGTAACTAGGAAAGTTCAGGAAAGTCAGCCA
TAAGCAAGAACAACTCATTGTGAAAGCCAACAGAAGAAAAATGTTATTTCCGTTTTTTTCCAAG
TCAATTGGAGGGATTAAAAAGTCCGTGTATCACCAATTTCTCTGTTGCATGAACTTTAGTGTTT
TACTATCTGACAGCATGAAAGTGATCAGGCTAAACTTCAATACTGTAGTCCAGATACAACTTAC
CTTGAATGTCTGCTCTTAAATAAGGTTTTCCTTGTCCGTTTCCTTTCAGCAGTCTTAACATTAT
GTGAAATTAACTTTTCAGCCAAAATTAAATCAGAGAAAAAACTTCAAGCCCTCTACATCGTCTT
TTTTTTTTTTTTTTTCATTTTTGGGAAAGGACCTGCCTGGCCTCAATGCCTACACACAGAGCAG
AGGTCGAATGGAGTTCATTAGCCTCATGTACCATAAGTAAAATGGCCAAGCATCTCTCCCGGAG
GATGTATTTCATTAATTCCTGTACATAGTGGGTCAGACATCCTCATTCCGGTCCATAATTCTGG
AATCTTCAGAACAGGGGCAAGCATAAATTCATTCACTTTTAAATAATATCTTATTTGGCTAAAC
TCAAGGACAGCAGTTCTCTACCTGTAGGTTGTGACCCCTCTGGGGATCAAACAACTCCCAGGGG
CTGCCTAAGACACTGGAAAACACAGATATTTACATTATGATTTATAACAGTAACAAAATTAGTT
TTATGGTGGGGATCACAACATGAACTGTACTAAAGGGTCACAGCATTAGGTAGGTTGAGACCAC
TGCTCTTGGAGAACTTGTGGCTTAAAACTATTGCTTCCTGGTGATACTGGTATGGGCTAGTCCA
TTTTGCCATTGCTGACATCCTCTTTCCTTGGGAAAAGTGGTTTCAACCCTTTAATCCCAGCACT
GGGGATGCAGAGGCAGGGAGGTCTCTTTGAGTTTAAGGCTAGCCTGGTCTACTCAGTAAGTTCC
ATGACAGCCAGAACTACATAGTGAGACTCTGCTTTGAAAAACAACAGAAAACAAAACCAAAACA
AATGTACTCATCTGTAGAAATGTTCCTACATACACCTATATACACATAAGTAAAAATAAATCTT
AAAAATGACCTCAAATGCTAATTTAGTTATTTAAAAACTGAAGAGTATCATCTTCTTGCTCAAT
TCCCTCAATCATTGGGAACACTTTACAGTTTGTACCTGAAGCTTCTGCCTGGTCATAGATACAT
GCCTGTAATTCCAACATTTGGGAGGCTGAGGCAGGAGTACTGGTTAGTGCCGATCTGGCCTATA
ATGAGATCTGTGCCCGGGTTAAATAGAAGGATGCGTTAGATACATTTGGCAACTCCAGTGCTCC
TTTTGGACTGAGTTTTCAGCTCTTTTGACTGGGATAACTAAGTTATGAAAAGATCTTTATGTTC
TACATCCAACTTAAGAATATCAGTTACTGAACAACATACCAGTTATAATCAAAATTCTCATCTT
ACTCATAAGTATCATCATTACACACTCTTACTTGTCAAACTTAAGAGGTATAGCTTGCTTAAAA
TACCTATGTGTAAAGTTCTATTTTCTTAGAAACATGGATGTTTGTAACCATGGCTTTCAGAGAT
TCTTACCACGTATTCTGTTTTACTGTGCTTTCATAGACTGTTATACCAGAGGTTTCCGATTATC
AAAGTAATAACGTGTTTTAACTGCCTATATGTACCAGAGTTGTGAACAAGTCAAAACCAAACAC
ACGCACTCTGAATAAAAGGGAGTTTGCAAACTAAA

hide sequence

RefSeq Acc Id:

XM_008766296 ⟹ XP_008764518

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	59,904,218 - 59,939,185 (-)	NCBI
mRatBN7.2	8	51,007,835 - 51,042,210 (-)	NCBI
Rnor_6.0	8	55,091,232 - 55,125,657 (-)	NCBI

Sequence:

show sequence

GAGGGATCGGGAGGCGGCGCCGAGCCGGAGCACCGCACGCTAGATCCACTCGACGCTCAGCTGG
AGCTACCGGAGCCTCTTGCCCCGAGGGAGATAGGTTAAAATGCGGCTGTCCGGGGGTTTGCTCG
GAGCCGCGCGACCGCAAGGACCAAGATGCTGCTGCCAGCGACCAGCCGCGGGCGATGGGAGGCA
GCTTCCGCTGGGGCTCGGCTGCGGCGGTGTCTGAACTACCGGGACAGCGCGCTTCACCCTAGGG
AGCATCCCGGTCCCCCGGGACAGGACGCCCACCTTTTCCCTTTCCTACTTTCTCCGGAGACCCG
GGCGAACCGTTCCGCTGGCTGGCTGATCTCTGGAACCGTTCTTCGAGCTCCGGTGCGGGGGGGA
TATGCCAGAATTTAGGAGTGATGTGACGCTCAGCCTCCTACCTCACCCAGGGAAGCAGGCTTCC
TGAAGCCAGAGCCAGGAGGGGACCATGGGAGGGACACAAGTCAAATGTCTGACTTCACCCAGTC
CAATTCACAGTGCAAAGAGCGAATCCATTATAACCCAGTCAGAGGAAAAGGCCGATTTTGTGAT
TATTCCCTCTGAAGGAATAGAGAACAGAACAGACGAGACAGGCTCTCCATTATCCCGAGACTGG
AGGCCGGGAAGCCCAGGAACCTACCTGGAAGCCACATGGGAAGAACAACTGTTGGAGCAACAAG
AACACTTGGAAAAAGAAATGGAGGAAGCCAAGAAAATGATTTCAGGACTACAGGCCTTGCTACT
CAATGGCTCTCTACCGGAGGATGAACAGGAAAGACCGGTGGCCCTCTGTGAACCAGGAGTCAAT
CCCGAGGAACAGCTGATTATAATCCGAAGCCGTCTGGATCAAAGTATGGAGGAGAATCAGGACC
TTAAGAAAGAACTGCTGAAATGCAAACAAGAAGCCAGAAACTTACAGGGGATAAAGGATGCCTT
GCAGCAGAGGTTGACTCAGCAGGACACGTCCGTTCTTCAGCTCAAGCAAGAGCTGCTGAGGGCA
AATATGGATAAGGATGAGCTGCACAACCAGAATGTGGATCTGCAGAGGAAGCTTGACGAGAGGA
ACCGGCTCTTAGGAGAATATAAAAAAGATCTGGGACAGAAGGACCGCCTTCTTCAACAGCAGCA
GGCCAAGTTGGAAGATGCTCTTCGGAAACTCTCAGACGCCAGTTACCAGCAGGTGGATCTAGAA
CGGGAGCTAGAGCAAAAAGATGTCCTTCTGGCTCACCGCGTGAAAGGAGACACAGATGAGGTGA
CAAATTACAACAGTCACAGCTCTCAGCGCAATGGCTTTGTCCTTCCGGTGGCAGGGAGAGCCGC
CACTACTGCCACCCACAGAGGGCCACAGAGCAGTGACCTCCAGCTCGTCCGAGATGCTCTACGT
AGCCTGCGAAACAGCTTCAGTGGTCATGACCCTCAGCATCACACCATTGACAGCCTGGAGCAGG
GAATCTCTAGCCTCATAGAGCGTCTGCATGTCATAGAGACACAGAAGAAACAGGAAAGGAAGGT
TCGGGGGCGGTCACCCAGAAATCAAGCAAGCAGTGAATATCGAGCCTCCTGGCCCCCCAATTCC
ACGTTGCCTCACTCCCAGAGCTCCCCGGCCGTCAGCAACACCTGCACTAAAGTGCTCTACTTCA
CGGACCGCTCACTCACGCCCTTCATGGTCAATATACCAAAGAGGCTGGGGGAGGTGACACTGAA
GGACTTTAAAGCAGCTATTGATCGAGAAGGGAGTCACCGGTACCACTTCAAAGCACTGGATCCC
GAGTTTGGCACTGTCAAAGAGGAGGTTTTCCATGATGATGATGCCATCCCTGGATGGGAAGGGA
AAATCGTAGCCTGGGTAGAAGATCATAGAGAGAATTAACTGGACCTGGACACTCCCTGGCTGCT
TCTCTCAGGAAAGAGGACTAACACCAGAGGACACTGAGAAGTTTCTAACTCGTGCTGCCAAAAA
GAAGCTTCTTCAAGTATGATGGTCACGGGCCAGTCCTGTTTGTGTGCCTGGCATATCTGGTACT
TCAAATCTCTGTCCAAAACATAGGAATATGGGTCCATCTGGAGCTCCTTGTCAGTGGGAACAGT
GTTTTCTTCTACTCTGAGGACATCAAACCGAAGGCCTTAACCACCAGGGAAGGATGACCCCTCT
CTCGTAGGGGCATGGCTGCTATGATCGGAACCTGGAGTGGAAGCATCAGTCCGTCGGTTGGCCT
TGATGGTTGCAGCAATCAGAGCCCAGCATTTGTGCTTACAGACAAGGCAGAGGTACCAACTTTG
CTGCTTCTTTGCAGACACTGCAAACCAGGAGTGACTTGTGAGGTGGTACCAAAGATGAGAGCCT
AAATGCATAACTGGCCTGGACGTGAACGATACTGACTTGTTGACTGGGTGGGGAGAGGGCCGCC
CATATTGTGCTATACTACGCCAAAACCATAACTCAGACCTTGGGCTGCCTCCTGTTTTTAACTG
GCTCTGCAGCTTGTCCTTAGCCCACTGTGGGCATTTTTCACATGCTGTTGGTTTTCTCTGGGGA
CTCTTTAACTTTAGAGCCATTTTATTTTTCTCCAAACAGATAAACCTTGTGTTTGAAAAGGATG
AGAGAAGCGAGAGGCTCCTTAAGAATCCAGGATACAGAAAGGTGCTGTTACCCACATCCCTTGA
CACGAACTCATGGCATCGCCTTTGCAAGGAGACAGACCTTTAATTTGTGTTTGTGAGTTGAGTA
CTGAGCACGACTTACTGGTCTGCCTCTCCCTTCGCGGCTGGAGTTACTTTCTATTACACATTTA
GCTTGGGCTGCTCCCTGAGGGCCATGCCCAGTGGAACCCTTGGGCACGGAGCGTGAGTGAGTTG
TGAATGGCAGGGTTGATTCAAGGTGAAGTCATTTCTTATTGCAACATTGCCGAGTATGAAGCTA
AAGAGTTCAACTTCCAGAGGTTCCTCACTAACTTGGGTTTTCTCATTCACTCACCTAGCACCAT
CTGCCAGTCAGCCATGGTTATCTGTTTATACAGTCCCTCAAGCAGTCTGCAACCACACTGTACA
CTGCCAAACAGAAGAGTGGGACAGAGGGCTCAGTCTGGGGCCTGCCTGTCTCTGTCTCCCATTT
TCAGCCATTTGAACAGCATATTCTTTGGAACGCTGAGATAACGTCTTATTGTTTTTTATAGACA
TGTCTTTTAAAAATAGTCCATGTTTGAGAATTGTTTTGTACTTGTTTGCTTTTGTCTGAGAACC
ATGTCTATTTTTCTAACTTGAATGACTTCTGTGTAATCTCACGTTCCCTGTACTCTATCCATTT
TCTACAACACCCAGTAGCTTTTCTACCTTCTCTTCCTACTGCCTCCTGTGGTTTCAGAACAAGC
TTTATTTTGTTACGAGTATACTAATGGCAGTTTGTTCTGTCCAATTCTCCCTGCTTTTAGTGGT
GGAGATCTTTTTTATTTTATTTTTTCTAGTTGATTGCTCTTCTAAAAGACATGAGATCAAAAAG
ACCTGATGTCTTCCATGCACACTACCCTGGTCTTCTTTTGAAGAACAATTTTTCATCAGCTGTA
ACTAGGAAAGTTCAGGAAAGTCAGCCATAAGCAAGAACAACTCATTGTGAAAGCCAACAGAAGA
AAAATGTTATTTCCGTTTTTTTCCAAGTCAATTGGAGGGATTAAAAAGTCCGTGTATCACCAAT
TTCTCTGTTGCATGAACTTTAGTGTTTTACTATCTGACAGCATGAAAGTGATCAGGCTAAACTT
CAATACTGTAGTCCAGATACAACTTACCTTGAATGTCTGCTCTTAAATAAGGTTTTCCTTGTCC
GTTTCCTTTCAGCAGTCTTAACATTATGTGAAATTAACTTTTCAGCCAAAATTAAATCAGAGAA
AAAACTTCAAGCCCTCTACATCGTCTTTTTTTTTTTTTTTTTCATTTTTGGGAAAGGACCTGCC
TGGCCTCAATGCCTACACACAGAGCAGAGGTCGAATGGAGTTCATTAGCCTCATGTACCATAAG
TAAAATGGCCAAGCATCTCTCCCGGAGGATGTATTTCATTAATTCCTGTACATAGTGGGTCAGA
CATCCTCATTCCGGTCCATAATTCTGGAATCTTCAGAACAGGGGCAAGCATAAATTCATTCACT
TTTAAATAATATCTTATTTGGCTAAACTCAAGGACAGCAGTTCTCTACCTGTAGGTTGTGACCC
CTCTGGGGATCAAACAACTCCCAGGGGCTGCCTAAGACACTGGAAAACACAGATATTTACATTA
TGATTTATAACAGTAACAAAATTAGTTTTATGGTGGGGATCACAACATGAACTGTACTAAAGGG
TCACAGCATTAGGTAGGTTGAGACCACTGCTCTTGGAGAACTTGTGGCTTAAAACTATTGCTTC
CTGGTGATACTGGTATGGGCTAGTCCATTTTGCCATTGCTGACATCCTCTTTCCTTGGGAAAAG
TGGTTTCAACCCTTTAATCCCAGCACTGGGGATGCAGAGGCAGGGAGGTCTCTTTGAGTTTAAG
GCTAGCCTGGTCTACTCAGTAAGTTCCATGACAGCCAGAACTACATAGTGAGACTCTGCTTTGA
AAAACAACAGAAAACAAAACCAAAACAAATGTACTCATCTGTAGAAATGTTCCTACATACACCT
ATATACACATAAGTAAAAATAAATCTTAAAAATGACCTCAAATGCTAATTTAGTTATTTAAAAA
CTGAAGAGTATCATCTTCTTGCTCAATTCCCTCAATCATTGGGAACACTTTACAGTTTGTACCT
GAAGCTTCTGCCTGGTCATAGATACATGCCTGTAATTCCAACATTTGGGAGGCTGAGGCAGGAG
TACTGGTTAGTGCCGATCTGGCCTATAATGAGATCTGTGCCCGGGTTAAATAGAAGGATGCGTT
AGATACATTTGGCAACTCCAGTGCTCCTTTTGGACTGAGTTTTCAGCTCTTTTGACTGGGATAA
CTAAGTTATGAAAAGATCTTTATGTTCTACATCCAACTTAAGAATATCAGTTACTGAACAACAT
ACCAGTTATAATCAAAATTCTCATCTTACTCATAAGTATCATCATTACACACTCTTACTTGTCA
AACTTAAGAGGTATAGCTTGCTTAAAATACCTATGTGTAAAGTTCTATTTTCTTAGAAACATGG
ATGTTTGTAACCATGGCTTTCAGAGATTCTTACCACGTATTCTGTTTTACTGTGCTTTCATAGA
CTGTTATACCAGAGGTTTCCGATTATCAAAGTAATAACGTGTTTTAACTGCCTATATGTACCAG
AGTTGTGAACAAGTCAAAACCAAACACACGCACTCTGAATAAAAGGGAGTTTGCAAACTAAA

hide sequence

RefSeq Acc Id:

XM_017595731 ⟹ XP_017451220

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	59,904,218 - 59,977,585 (-)	NCBI
mRatBN7.2	8	51,007,835 - 51,081,191 (-)	NCBI
Rnor_6.0	8	55,091,232 - 55,164,636 (-)	NCBI

Sequence:

show sequence

ATTGGTTGAAGGCGGGCGGTAGGCGGGACTAAATGAGGGGTGGGAACAAGAAGATGACGGTCTC
GGAGGGTGGTAGGGGGTTCTGATACGGATGCTGGAAGGCGGGTCCAGAGTGGTAGGGGCGGGTT
TTTGGTCGACTGGAGGCGGGGCCTGGAAGGCAGGAGCCTAGCCTAGGCTTGCGGGGGCTGGCTT
TTGTCCAGGGAAGGCAGGCCCGACCTACGTAAGCCTTCGTGTCGCCATGGCAGCAGGAACGCGC
AGCTCCGTAAAAGTGCGGGCTAGCCAGGAAGATGCTGAACCAAACCGGCCGATAATTTATGAGG
TGGCCCTGAGTCGGATCTTCTAGGGAATCTGAAGATGGGGACTCAAGTGGTTATGAGAGTCTGT
AACTCCTCTCTGCCTGGAGCGCCCTCTCAACAGCTACAGGCCTATGTGGCCTGGGTGAATGCCC
AGCTGAAGAAGAGGCCATCCGTGAAGCCTGTGCAGGACCTGCGACAGGATCTCCGAGATGGAGT
AATCCTGGCCTATCTCATCGAGATTGTTGGTGTTGTCGATGTTGTTGTTTTTCTTCTCCTAACA
GCAGGAGAAAAACTGAGCGGAGTACAGTTGAGTCCTAGTAACCAGCAGGAGATGAAGAGCAATG
TGGAGAGGGTCCTACAGTTTGTGGCTTCCAAAAATATTCGTATGCACCAGACTTCGGCTAAAGA
TATTGTGGAAGGAAACCTGAAGTCTATCATGAGGCTGGTCCTTGCCTTGGCAGCTCATTTTAAA
CCTGGCTCTAGCAGGACGGTGAGCCAGGGGCGAGACTCCAGAACCTCTGTGCAGAGTCATCAAC
CACACTGTGCCACCGCTGTGGCCCAAGGAGCAGCGGCTGCTCTGGCTGATGTGTGCCATGACGT
GTCACGGTCAGGACGGGATGTCTTCAGATACAGACAGAGGAATGCCAGTGTGGATGAGGAGATC
GAGAACCCATACTGGAGTGTGCGAGCACTTGTGCAGCAATACGAAGGCCAGCAAAGGTCCCCAT
CTGAGTCCAGCTGCTCCAGTCTGACTTCACCCAGTCCAATTCACAGTGCAAAGAGCGAATCCAT
TATAACCCAGTCAGAGGAAAAGGCCGATTTTGTGATTATTCCCTCTGAAGGAATAGAGAACAGA
ACAGACGAGACAGGCTCTCCATTATCCCGAGACTGGAGGCCGGGAAGCCCAGGAACCTACCTGG
AAGCCACATGGGAAGAACAACTGTTGGAGCAACAAGAACACTTGGAAAAAGAAATGGAGGAAGC
CAAGAAAATGATTTCAGGACTACAGGCCTTGCTACTCAATGGCTCTCTACCGGAGGATGAACAG
GAAAGACCGGTGGCCCTCTGTGAACCAGGAGTCAATCCCGAGGAACAGCTGATTATAATCCGAA
GCCGTCTGGATCAAAGTATGGAGGAGAATCAGGACCTTAAGAAAGAACTGCTGAAATGCAAACA
AGAAGCCAGAAACTTACAGGGGATAAAGGATGCCTTGCAGCAGAGGTTGACTCAGCAGGACACG
TCCGTTCTTCAGCTCAAGCAAGAGCTGCTGAGGGCAAATATGGATAAGGATGAGCTGCACAACC
AGAATGTGGATCTGCAGAGGAAGCTTGACGAGAGGAACCGGCTCTTAGGAGAATATAAAAAAGA
TCTGGGACAGAAGGACCGCCTTCTTCAACAGCAGCAGGCCAAGTTGGAAGATGCTCTTCGGAAA
CTCTCAGACGCCAGTTACCAGCAGGTGGATCTAGAACGGGAGCTAGAGCAAAAAGATGTCCTTC
TGGCTCACCGCGTGAAAGGAGACACAGATGAGGTGACAAATTACAACAGTCACAGCTCTCAGCG
CAATGGCTTTGTCCTTCCGGTGGCAGGGAGAGCCGCCACTACTGCCACCCACAGAGGGCCACAG
AGCAGTGACCTCCAGCTCGTCCGAGATGCTCTACGTAGCCTGCGAAACAGCTTCAGTGGTCATG
ACCCTCAGCATCACACCATTGACAGCCTGGAGCAGGGAATCTCTAGCCTCATAGAGCGTCTGCA
TGTCATAGAGACACAGAAGAAACAGGAAAGGAAGGTTCGGGGGCGGTCACCCAGAAATCAAGCA
AGCAGTGAATATCGAGCCTCCTGGCCCCCCAATTCCACGTTGCCTCACTCCCAGAGCTCCCCGG
CCGTCAGCAACACCTGCACTAAAGTGCTCTACTTCACGGACCGCTCACTCACGCCCTTCATGGT
CAATATACCAAAGAGGCTGGGGGAGGTGACACTGAAGGACTTTAAAGCAGCTATTGATCGAGAA
GGGAGTCACCGGTACCACTTCAAAGCACTGGATCCCGAGTTTGGCACTGTCAAAGAGGAGGTTT
TCCATGATGATGATGCCATCCCTGGATGGGAAGGGAAAATCGTAGCCTGGGTAGAAGATCATAG
AGAGAATTAACTGGACCTGGACACTCCCTGGCTGCTTCTCTCAGGAAAGAGGACTAACACCAGA
GGACACTGAGAAGTTTCTAACTCGTGCTGCCAAAAAGAAGCTTCTTCAAGTATGATGGTCACGG
GCCAGTCCTGTTTGTGTGCCTGGCATATCTGGTACTTCAAATCTCTGTCCAAAACATAGGAATA
TGGGTCCATCTGGAGCTCCTTGTCAGTGGGAACAGTGTTTTCTTCTACTCTGAGGACATCAAAC
CGAAGGCCTTAACCACCAGGGAAGGATGACCCCTCTCTCGTAGGGGCATGGCTGCTATGATCGG
AACCTGGAGTGGAAGCATCAGTCCGTCGGTTGGCCTTGATGGTTGCAGCAATCAGAGCCCAGCA
TTTGTGCTTACAGACAAGGCAGAGGTACCAACTTTGCTGCTTCTTTGCAGACACTGCAAACCAG
GAGTGACTTGTGAGGTGGTACCAAAGATGAGAGCCTAAATGCATAACTGGCCTGGACGTGAACG
ATACTGACTTGTTGACTGGGTGGGGAGAGGGCCGCCCATATTGTGCTATACTACGCCAAAACCA
TAACTCAGACCTTGGGCTGCCTCCTGTTTTTAACTGGCTCTGCAGCTTGTCCTTAGCCCACTGT
GGGCATTTTTCACATGCTGTTGGTTTTCTCTGGGGACTCTTTAACTTTAGAGCCATTTTATTTT
TCTCCAAACAGATAAACCTTGTGTTTGAAAAGGATGAGAGAAGCGAGAGGCTCCTTAAGAATCC
AGGATACAGAAAGGTGCTGTTACCCACATCCCTTGACACGAACTCATGGCATCGCCTTTGCAAG
GAGACAGACCTTTAATTTGTGTTTGTGAGTTGAGTACTGAGCACGACTTACTGGTCTGCCTCTC
CCTTCGCGGCTGGAGTTACTTTCTATTACACATTTAGCTTGGGCTGCTCCCTGAGGGCCATGCC
CAGTGGAACCCTTGGGCACGGAGCGTGAGTGAGTTGTGAATGGCAGGGTTGATTCAAGGTGAAG
TCATTTCTTATTGCAACATTGCCGAGTATGAAGCTAAAGAGTTCAACTTCCAGAGGTTCCTCAC
TAACTTGGGTTTTCTCATTCACTCACCTAGCACCATCTGCCAGTCAGCCATGGTTATCTGTTTA
TACAGTCCCTCAAGCAGTCTGCAACCACACTGTACACTGCCAAACAGAAGAGTGGGACAGAGGG
CTCAGTCTGGGGCCTGCCTGTCTCTGTCTCCCATTTTCAGCCATTTGAACAGCATATTCTTTGG
AACGCTGAGATAACGTCTTATTGTTTTTTATAGACATGTCTTTTAAAAATAGTCCATGTTTGAG
AATTGTTTTGTACTTGTTTGCTTTTGTCTGAGAACCATGTCTATTTTTCTAACTTGAATGACTT
CTGTGTAATCTCACGTTCCCTGTACTCTATCCATTTTCTACAACACCCAGTAGCTTTTCTACCT
TCTCTTCCTACTGCCTCCTGTGGTTTCAGAACAAGCTTTATTTTGTTACGAGTATACTAATGGC
AGTTTGTTCTGTCCAATTCTCCCTGCTTTTAGTGGTGGAGATCTTTTTTATTTTATTTTTTCTA
GTTGATTGCTCTTCTAAAAGACATGAGATCAAAAAGACCTGATGTCTTCCATGCACACTACCCT
GGTCTTCTTTTGAAGAACAATTTTTCATCAGCTGTAACTAGGAAAGTTCAGGAAAGTCAGCCAT
AAGCAAGAACAACTCATTGTGAAAGCCAACAGAAGAAAAATGTTATTTCCGTTTTTTTCCAAGT
CAATTGGAGGGATTAAAAAGTCCGTGTATCACCAATTTCTCTGTTGCATGAACTTTAGTGTTTT
ACTATCTGACAGCATGAAAGTGATCAGGCTAAACTTCAATACTGTAGTCCAGATACAACTTACC
TTGAATGTCTGCTCTTAAATAAGGTTTTCCTTGTCCGTTTCCTTTCAGCAGTCTTAACATTATG
TGAAATTAACTTTTCAGCCAAAATTAAATCAGAGAAAAAACTTCAAGCCCTCTACATCGTCTTT
TTTTTTTTTTTTTTCATTTTTGGGAAAGGACCTGCCTGGCCTCAATGCCTACACACAGAGCAGA
GGTCGAATGGAGTTCATTAGCCTCATGTACCATAAGTAAAATGGCCAAGCATCTCTCCCGGAGG
ATGTATTTCATTAATTCCTGTACATAGTGGGTCAGACATCCTCATTCCGGTCCATAATTCTGGA
ATCTTCAGAACAGGGGCAAGCATAAATTCATTCACTTTTAAATAATATCTTATTTGGCTAAACT
CAAGGACAGCAGTTCTCTACCTGTAGGTTGTGACCCCTCTGGGGATCAAACAACTCCCAGGGGC
TGCCTAAGACACTGGAAAACACAGATATTTACATTATGATTTATAACAGTAACAAAATTAGTTT
TATGGTGGGGATCACAACATGAACTGTACTAAAGGGTCACAGCATTAGGTAGGTTGAGACCACT
GCTCTTGGAGAACTTGTGGCTTAAAACTATTGCTTCCTGGTGATACTGGTATGGGCTAGTCCAT
TTTGCCATTGCTGACATCCTCTTTCCTTGGGAAAAGTGGTTTCAACCCTTTAATCCCAGCACTG
GGGATGCAGAGGCAGGGAGGTCTCTTTGAGTTTAAGGCTAGCCTGGTCTACTCAGTAAGTTCCA
TGACAGCCAGAACTACATAGTGAGACTCTGCTTTGAAAAACAACAGAAAACAAAACCAAAACAA
ATGTACTCATCTGTAGAAATGTTCCTACATACACCTATATACACATAAGTAAAAATAAATCTTA
AAAATGACCTCAAATGCTAATTTAGTTATTTAAAAACTGAAGAGTATCATCTTCTTGCTCAATT
CCCTCAATCATTGGGAACACTTTACAGTTTGTACCTGAAGCTTCTGCCTGGTCATAGATACATG
CCTGTAATTCCAACATTTGGGAGGCTGAGGCAGGAGTACTGGTTAGTGCCGATCTGGCCTATAA
TGAGATCTGTGCCCGGGTTAAATAGAAGGATGCGTTAGATACATTTGGCAACTCCAGTGCTCCT
TTTGGACTGAGTTTTCAGCTCTTTTGACTGGGATAACTAAGTTATGAAAAGATCTTTATGTTCT
ACATCCAACTTAAGAATATCAGTTACTGAACAACATACCAGTTATAATCAAAATTCTCATCTTA
CTCATAAGTATCATCATTACACACTCTTACTTGTCAAACTTAAGAGGTATAGCTTGCTTAAAAT
ACCTATGTGTAAAGTTCTATTTTCTTAGAAACATGGATGTTTGTAACCATGGCTTTCAGAGATT
CTTACCACGTATTCTGTTTTACTGTGCTTTCATAGACTGTTATACCAGAGGTTTCCGATTATCA
AAGTAATAACGTGTTTTAACTGCCTATATGTACCAGAGTTGTGAACAAGTCAAAACCAAACACA
CGCACTCTGAATAAAAGGGAGTTTGCAAACTAAA

hide sequence

RefSeq Acc Id:

XM_017595732 ⟹ XP_017451221

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	59,904,218 - 59,968,334 (-)	NCBI
mRatBN7.2	8	51,007,835 - 51,070,825 (-)	NCBI
Rnor_6.0	8	55,091,232 - 55,153,671 (-)	NCBI

Sequence:

show sequence

GTGTGTGTGTAACGTGCGTGTATATGCGAGCACGCGCACGGGGACGCCCGCCTCCAAACCTGCA
GTGTAGTGATTGCAAGCATATGGTTAGACTGGCAAACCCGCTTGTGTCAGCGCGGGTGTGTGTG
TGCTCACGCATGTGTGAGTGCTCGCCACGAACCCCAGTGCGGAGCCTGCGTGCGCGCCCACGGC
TTCCCCGCATTCCCTGGCGGCCCGGGGCTGCCTGCGAGCGCCTATCGCCTGTCTGCTCAGCGCG
CGCCCTGCTGTTTCTATAGGAACCAGCACAGCGCCGGGCCCCTTCGGCTGCGGCCCGCGCGCGA
GCATGCCCAGTGCAAGCCGCTAGTTTGGCTCGGGTCTAGGTTTCCAGTAAGTGGCATGCGGGAC
TCCGGAGAGCTCCCAGGGAGCTGAGCCGATCGCCTTTGTGTGCAGAGGGAGGAGGCGGCGGCGC
GACCCCACCCGGGAAGCCCCGCGGCAGGAACAATGCTAGCCTGCTTGACCCGCGGGAACTTACT
GGACGTCCTGCAAGAGGGCTTCAATGAGCAACAGCTACAGGCCTATGTGGCCTGGGTGAATGCC
CAGCTGAAGAAGAGGCCATCCGTGAAGCCTGTGCAGGACCTGCGACAGGATCTCCGAGATGGAG
TAATCCTGGCCTATCTCATCGAGATTGTTGGAGAAAAACTGAGCGGAGTACAGTTGAGTCCTAG
TAACCAGCAGGAGATGAAGAGCAATGTGGAGAGGGTCCTACAGTTTGTGGCTTCCAAAAATATT
CGTATGCACCAGACTTCGGCTAAAGATATTGTGGAAGGAAACCTGAAGTCTATCATGAGGCTGG
TCCTTGCCTTGGCAGCTCATTTTAAACCTGGCTCTAGCAGGACGGTGAGCCAGGGGCGAGACTC
CAGAACCTCTGTGCAGAGTCATCAACCACACTGTGCCACCGCTGTGGCCCAAGGAGCAGCGGCT
GCTCTGGCTGATGTGTGCCATGACGTGTCACGGTCAGGACGGGATGTCTTCAGATACAGACAGA
GGAATGCCAGTGTGGATGAGGAGATCGAGAACCCATACTGGAGTGTGCGAGCACTTGTGCAGCA
ATACGAAGGCCAGCAAAGGTCCCCATCTGAGTCCAGCTGCTCCAGTCTGACTTCACCCAGTCCA
ATTCACAGTGCAAAGAGCGAATCCATTATAACCCAGTCAGAGGAAAAGGCCGATTTTGTGATTA
TTCCCTCTGAAGGAATAGAGAACAGAACAGACGAGACAGGCTCTCCATTATCCCGAGACTGGAG
GCCGGGAAGCCCAGGAACCTACCTGGAAGCCACATGGGAAGAACAACTGTTGGAGCAACAAGAA
CACTTGGAAAAAGAAATGGAGGAAGCCAAGAAAATGATTTCAGGACTACAGGCCTTGCTACTCA
ATGGCTCTCTACCGGAGGATGAACAGGAAAGACCGGTGGCCCTCTGTGAACCAGGAGTCAATCC
CGAGGAACAGCTGATTATAATCCGAAGCCGTCTGGATCAAAGTATGGAGGAGAATCAGGACCTT
AAGAAAGAACTGCTGAAATGCAAACAAGAAGCCAGAAACTTACAGGGGATAAAGGATGCCTTGC
AGCAGAGGTTGACTCAGCAGGACACGTCCGTTCTTCAGCTCAAGCAAGAGCTGCTGAGGGCAAA
TATGGATAAGGATGAGCTGCACAACCAGAATGTGGATCTGCAGAGGAAGCTTGACGAGAGGAAC
CGGCTCTTAGGAGAATATAAAAAAGATCTGGGACAGAAGGACCGCCTTCTTCAACAGCAGCAGG
CCAAGTTGGAAGATGCTCTTCGGAAACTCTCAGACGCCAGTTACCAGCAGGTGGATCTAGAACG
GGAGCTAGAGCAAAAAGATGTCCTTCTGGCTCACCGCGTGAAAGGAGACACAGATGAGGTGACA
AATTACAACAGTCACAGCTCTCAGCGCAATGGCTTTGTCCTTCCGGTGGCAGGGAGAGCCGCCA
CTACTGCCACCCACAGAGGGCCACAGAGCAGTGACCTCCAGCTCGTCCGAGATGCTCTACGTAG
CCTGCGAAACAGCTTCAGTGGTCATGACCCTCAGCATCACACCATTGACAGCCTGGAGCAGGGA
ATCTCTAGCCTCATAGAGCGTCTGCATGTCATAGAGACACAGAAGAAACAGGAAAGGAAGGTTC
GGGGGCGGTCACCCAGAAATCAAGCAAGCAGTGAATATCGAGCCTCCTGGCCCCCCAATTCCAC
GTTGCCTCACTCCCAGAGCTCCCCGGCCGTCAGCAACACCTGCACTAAAGTGCTCTACTTCACG
GACCGCTCACTCACGCCCTTCATGGTCAATATACCAAAGAGGCTGGGGGAGGTGACACTGAAGG
ACTTTAAAGCAGCTATTGATCGAGAAGGGAGTCACCGGTACCACTTCAAAGCACTGGATCCCGA
GTTTGGCACTGTCAAAGAGGAGGTTTTCCATGATGATGATGCCATCCCTGGATGGGAAGGGAAA
ATCGTAGCCTGGGTAGAAGATCATAGAGAGAATTAACTGGACCTGGACACTCCCTGGCTGCTTC
TCTCAGGAAAGAGGACTAACACCAGAGGACACTGAGAAGTTTCTAACTCGTGCTGCCAAAAAGA
AGCTTCTTCAAGTATGATGGTCACGGGCCAGTCCTGTTTGTGTGCCTGGCATATCTGGTACTTC
AAATCTCTGTCCAAAACATAGGAATATGGGTCCATCTGGAGCTCCTTGTCAGTGGGAACAGTGT
TTTCTTCTACTCTGAGGACATCAAACCGAAGGCCTTAACCACCAGGGAAGGATGACCCCTCTCT
CGTAGGGGCATGGCTGCTATGATCGGAACCTGGAGTGGAAGCATCAGTCCGTCGGTTGGCCTTG
ATGGTTGCAGCAATCAGAGCCCAGCATTTGTGCTTACAGACAAGGCAGAGGTACCAACTTTGCT
GCTTCTTTGCAGACACTGCAAACCAGGAGTGACTTGTGAGGTGGTACCAAAGATGAGAGCCTAA
ATGCATAACTGGCCTGGACGTGAACGATACTGACTTGTTGACTGGGTGGGGAGAGGGCCGCCCA
TATTGTGCTATACTACGCCAAAACCATAACTCAGACCTTGGGCTGCCTCCTGTTTTTAACTGGC
TCTGCAGCTTGTCCTTAGCCCACTGTGGGCATTTTTCACATGCTGTTGGTTTTCTCTGGGGACT
CTTTAACTTTAGAGCCATTTTATTTTTCTCCAAACAGATAAACCTTGTGTTTGAAAAGGATGAG
AGAAGCGAGAGGCTCCTTAAGAATCCAGGATACAGAAAGGTGCTGTTACCCACATCCCTTGACA
CGAACTCATGGCATCGCCTTTGCAAGGAGACAGACCTTTAATTTGTGTTTGTGAGTTGAGTACT
GAGCACGACTTACTGGTCTGCCTCTCCCTTCGCGGCTGGAGTTACTTTCTATTACACATTTAGC
TTGGGCTGCTCCCTGAGGGCCATGCCCAGTGGAACCCTTGGGCACGGAGCGTGAGTGAGTTGTG
AATGGCAGGGTTGATTCAAGGTGAAGTCATTTCTTATTGCAACATTGCCGAGTATGAAGCTAAA
GAGTTCAACTTCCAGAGGTTCCTCACTAACTTGGGTTTTCTCATTCACTCACCTAGCACCATCT
GCCAGTCAGCCATGGTTATCTGTTTATACAGTCCCTCAAGCAGTCTGCAACCACACTGTACACT
GCCAAACAGAAGAGTGGGACAGAGGGCTCAGTCTGGGGCCTGCCTGTCTCTGTCTCCCATTTTC
AGCCATTTGAACAGCATATTCTTTGGAACGCTGAGATAACGTCTTATTGTTTTTTATAGACATG
TCTTTTAAAAATAGTCCATGTTTGAGAATTGTTTTGTACTTGTTTGCTTTTGTCTGAGAACCAT
GTCTATTTTTCTAACTTGAATGACTTCTGTGTAATCTCACGTTCCCTGTACTCTATCCATTTTC
TACAACACCCAGTAGCTTTTCTACCTTCTCTTCCTACTGCCTCCTGTGGTTTCAGAACAAGCTT
TATTTTGTTACGAGTATACTAATGGCAGTTTGTTCTGTCCAATTCTCCCTGCTTTTAGTGGTGG
AGATCTTTTTTATTTTATTTTTTCTAGTTGATTGCTCTTCTAAAAGACATGAGATCAAAAAGAC
CTGATGTCTTCCATGCACACTACCCTGGTCTTCTTTTGAAGAACAATTTTTCATCAGCTGTAAC
TAGGAAAGTTCAGGAAAGTCAGCCATAAGCAAGAACAACTCATTGTGAAAGCCAACAGAAGAAA
AATGTTATTTCCGTTTTTTTCCAAGTCAATTGGAGGGATTAAAAAGTCCGTGTATCACCAATTT
CTCTGTTGCATGAACTTTAGTGTTTTACTATCTGACAGCATGAAAGTGATCAGGCTAAACTTCA
ATACTGTAGTCCAGATACAACTTACCTTGAATGTCTGCTCTTAAATAAGGTTTTCCTTGTCCGT
TTCCTTTCAGCAGTCTTAACATTATGTGAAATTAACTTTTCAGCCAAAATTAAATCAGAGAAAA
AACTTCAAGCCCTCTACATCGTCTTTTTTTTTTTTTTTTTCATTTTTGGGAAAGGACCTGCCTG
GCCTCAATGCCTACACACAGAGCAGAGGTCGAATGGAGTTCATTAGCCTCATGTACCATAAGTA
AAATGGCCAAGCATCTCTCCCGGAGGATGTATTTCATTAATTCCTGTACATAGTGGGTCAGACA
TCCTCATTCCGGTCCATAATTCTGGAATCTTCAGAACAGGGGCAAGCATAAATTCATTCACTTT
TAAATAATATCTTATTTGGCTAAACTCAAGGACAGCAGTTCTCTACCTGTAGGTTGTGACCCCT
CTGGGGATCAAACAACTCCCAGGGGCTGCCTAAGACACTGGAAAACACAGATATTTACATTATG
ATTTATAACAGTAACAAAATTAGTTTTATGGTGGGGATCACAACATGAACTGTACTAAAGGGTC
ACAGCATTAGGTAGGTTGAGACCACTGCTCTTGGAGAACTTGTGGCTTAAAACTATTGCTTCCT
GGTGATACTGGTATGGGCTAGTCCATTTTGCCATTGCTGACATCCTCTTTCCTTGGGAAAAGTG
GTTTCAACCCTTTAATCCCAGCACTGGGGATGCAGAGGCAGGGAGGTCTCTTTGAGTTTAAGGC
TAGCCTGGTCTACTCAGTAAGTTCCATGACAGCCAGAACTACATAGTGAGACTCTGCTTTGAAA
AACAACAGAAAACAAAACCAAAACAAATGTACTCATCTGTAGAAATGTTCCTACATACACCTAT
ATACACATAAGTAAAAATAAATCTTAAAAATGACCTCAAATGCTAATTTAGTTATTTAAAAACT
GAAGAGTATCATCTTCTTGCTCAATTCCCTCAATCATTGGGAACACTTTACAGTTTGTACCTGA
AGCTTCTGCCTGGTCATAGATACATGCCTGTAATTCCAACATTTGGGAGGCTGAGGCAGGAGTA
CTGGTTAGTGCCGATCTGGCCTATAATGAGATCTGTGCCCGGGTTAAATAGAAGGATGCGTTAG
ATACATTTGGCAACTCCAGTGCTCCTTTTGGACTGAGTTTTCAGCTCTTTTGACTGGGATAACT
AAGTTATGAAAAGATCTTTATGTTCTACATCCAACTTAAGAATATCAGTTACTGAACAACATAC
CAGTTATAATCAAAATTCTCATCTTACTCATAAGTATCATCATTACACACTCTTACTTGTCAAA
CTTAAGAGGTATAGCTTGCTTAAAATACCTATGTGTAAAGTTCTATTTTCTTAGAAACATGGAT
GTTTGTAACCATGGCTTTCAGAGATTCTTACCACGTATTCTGTTTTACTGTGCTTTCATAGACT
GTTATACCAGAGGTTTCCGATTATCAAAGTAATAACGTGTTTTAACTGCCTATATGTACCAGAG
TTGTGAACAAGTCAAAACCAAACACACGCACTCTGAATAAAAGGGAGTTTGCAAACTAAA

hide sequence

RefSeq Acc Id:

XM_017595733 ⟹ XP_017451222

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	59,904,218 - 59,977,548 (-)	NCBI
mRatBN7.2	8	51,007,835 - 51,079,032 (-)	NCBI
Rnor_6.0	8	55,091,232 - 55,162,404 (-)	NCBI

Sequence:

show sequence

AGGGAATCTGAAGATGGGGACTCAAGTGGTTATGAGAGTCTGTAACTCCTCTCTGCCTGGAGCG
CCCTCTCAGGAGAAAAACTGAGCGGAGTACAGTTGAGTCCTAGTAACCAGCAGGAGATGAAGAG
CAATGTGGAGAGGGTCCTACAGTTTGTGGCTTCCAAAAATATTCGTATGCACCAGACTTCGGCT
AAAGATATTGTGGAAGGAAACCTGAAGTCTATCATGAGGCTGGTCCTTGCCTTGGCAGCTCATT
TTAAACCTGGCTCTAGCAGGACGGTGAGCCAGGGGCGAGACTCCAGAACCTCTGTGCAGAGTCA
TCAACCACACTGTGCCACCGCTGTGGCCCAAGGAGCAGCGGCTGCTCTGGCTGATGTGTGCCAT
GACGTGTCACGGTCAGGACGGGATGTCTTCAGATACAGACAGAGGAATGCCAGTGTGGATGAGG
AGATCGAGAACCCATACTGGAGTGTGCGAGCACTTGTGCAGCAATACGAAGGCCAGCAAAGGTC
CCCATCTGAGTCCAGCTGCTCCAGTCTGACTTCACCCAGTCCAATTCACAGTGCAAAGAGCGAA
TCCATTATAACCCAGTCAGAGGAAAAGGCCGATTTTGTGATTATTCCCTCTGAAGGAATAGAGA
ACAGAACAGACGAGACAGGCTCTCCATTATCCCGAGACTGGAGGCCGGGAAGCCCAGGAACCTA
CCTGGAAGCCACATGGGAAGAACAACTGTTGGAGCAACAAGAACACTTGGAAAAAGAAATGGAG
GAAGCCAAGAAAATGATTTCAGGACTACAGGCCTTGCTACTCAATGGCTCTCTACCGGAGGATG
AACAGGAAAGACCGGTGGCCCTCTGTGAACCAGGAGTCAATCCCGAGGAACAGCTGATTATAAT
CCGAAGCCGTCTGGATCAAAGTATGGAGGAGAATCAGGACCTTAAGAAAGAACTGCTGAAATGC
AAACAAGAAGCCAGAAACTTACAGGGGATAAAGGATGCCTTGCAGCAGAGGTTGACTCAGCAGG
ACACGTCCGTTCTTCAGCTCAAGCAAGAGCTGCTGAGGGCAAATATGGATAAGGATGAGCTGCA
CAACCAGAATGTGGATCTGCAGAGGAAGCTTGACGAGAGGAACCGGCTCTTAGGAGAATATAAA
AAAGATCTGGGACAGAAGGACCGCCTTCTTCAACAGCAGCAGGCCAAGTTGGAAGATGCTCTTC
GGAAACTCTCAGACGCCAGTTACCAGCAGGTGGATCTAGAACGGGAGCTAGAGCAAAAAGATGT
CCTTCTGGCTCACCGCGTGAAAGGAGACACAGATGAGGTGACAAATTACAACAGTCACAGCTCT
CAGCGCAATGGCTTTGTCCTTCCGGTGGCAGGGAGAGCCGCCACTACTGCCACCCACAGAGGGC
CACAGAGCAGTGACCTCCAGCTCGTCCGAGATGCTCTACGTAGCCTGCGAAACAGCTTCAGTGG
TCATGACCCTCAGCATCACACCATTGACAGCCTGGAGCAGGGAATCTCTAGCCTCATAGAGCGT
CTGCATGTCATAGAGACACAGAAGAAACAGGAAAGGAAGGTTCGGGGGCGGTCACCCAGAAATC
AAGCAAGCAGTGAATATCGAGCCTCCTGGCCCCCCAATTCCACGTTGCCTCACTCCCAGAGCTC
CCCGGCCGTCAGCAACACCTGCACTAAAGTGCTCTACTTCACGGACCGCTCACTCACGCCCTTC
ATGGTCAATATACCAAAGAGGCTGGGGGAGGTGACACTGAAGGACTTTAAAGCAGCTATTGATC
GAGAAGGGAGTCACCGGTACCACTTCAAAGCACTGGATCCCGAGTTTGGCACTGTCAAAGAGGA
GGTTTTCCATGATGATGATGCCATCCCTGGATGGGAAGGGAAAATCGTAGCCTGGGTAGAAGAT
CATAGAGAGAATTAACTGGACCTGGACACTCCCTGGCTGCTTCTCTCAGGAAAGAGGACTAACA
CCAGAGGACACTGAGAAGTTTCTAACTCGTGCTGCCAAAAAGAAGCTTCTTCAAGTATGATGGT
CACGGGCCAGTCCTGTTTGTGTGCCTGGCATATCTGGTACTTCAAATCTCTGTCCAAAACATAG
GAATATGGGTCCATCTGGAGCTCCTTGTCAGTGGGAACAGTGTTTTCTTCTACTCTGAGGACAT
CAAACCGAAGGCCTTAACCACCAGGGAAGGATGACCCCTCTCTCGTAGGGGCATGGCTGCTATG
ATCGGAACCTGGAGTGGAAGCATCAGTCCGTCGGTTGGCCTTGATGGTTGCAGCAATCAGAGCC
CAGCATTTGTGCTTACAGACAAGGCAGAGGTACCAACTTTGCTGCTTCTTTGCAGACACTGCAA
ACCAGGAGTGACTTGTGAGGTGGTACCAAAGATGAGAGCCTAAATGCATAACTGGCCTGGACGT
GAACGATACTGACTTGTTGACTGGGTGGGGAGAGGGCCGCCCATATTGTGCTATACTACGCCAA
AACCATAACTCAGACCTTGGGCTGCCTCCTGTTTTTAACTGGCTCTGCAGCTTGTCCTTAGCCC
ACTGTGGGCATTTTTCACATGCTGTTGGTTTTCTCTGGGGACTCTTTAACTTTAGAGCCATTTT
ATTTTTCTCCAAACAGATAAACCTTGTGTTTGAAAAGGATGAGAGAAGCGAGAGGCTCCTTAAG
AATCCAGGATACAGAAAGGTGCTGTTACCCACATCCCTTGACACGAACTCATGGCATCGCCTTT
GCAAGGAGACAGACCTTTAATTTGTGTTTGTGAGTTGAGTACTGAGCACGACTTACTGGTCTGC
CTCTCCCTTCGCGGCTGGAGTTACTTTCTATTACACATTTAGCTTGGGCTGCTCCCTGAGGGCC
ATGCCCAGTGGAACCCTTGGGCACGGAGCGTGAGTGAGTTGTGAATGGCAGGGTTGATTCAAGG
TGAAGTCATTTCTTATTGCAACATTGCCGAGTATGAAGCTAAAGAGTTCAACTTCCAGAGGTTC
CTCACTAACTTGGGTTTTCTCATTCACTCACCTAGCACCATCTGCCAGTCAGCCATGGTTATCT
GTTTATACAGTCCCTCAAGCAGTCTGCAACCACACTGTACACTGCCAAACAGAAGAGTGGGACA
GAGGGCTCAGTCTGGGGCCTGCCTGTCTCTGTCTCCCATTTTCAGCCATTTGAACAGCATATTC
TTTGGAACGCTGAGATAACGTCTTATTGTTTTTTATAGACATGTCTTTTAAAAATAGTCCATGT
TTGAGAATTGTTTTGTACTTGTTTGCTTTTGTCTGAGAACCATGTCTATTTTTCTAACTTGAAT
GACTTCTGTGTAATCTCACGTTCCCTGTACTCTATCCATTTTCTACAACACCCAGTAGCTTTTC
TACCTTCTCTTCCTACTGCCTCCTGTGGTTTCAGAACAAGCTTTATTTTGTTACGAGTATACTA
ATGGCAGTTTGTTCTGTCCAATTCTCCCTGCTTTTAGTGGTGGAGATCTTTTTTATTTTATTTT
TTCTAGTTGATTGCTCTTCTAAAAGACATGAGATCAAAAAGACCTGATGTCTTCCATGCACACT
ACCCTGGTCTTCTTTTGAAGAACAATTTTTCATCAGCTGTAACTAGGAAAGTTCAGGAAAGTCA
GCCATAAGCAAGAACAACTCATTGTGAAAGCCAACAGAAGAAAAATGTTATTTCCGTTTTTTTC
CAAGTCAATTGGAGGGATTAAAAAGTCCGTGTATCACCAATTTCTCTGTTGCATGAACTTTAGT
GTTTTACTATCTGACAGCATGAAAGTGATCAGGCTAAACTTCAATACTGTAGTCCAGATACAAC
TTACCTTGAATGTCTGCTCTTAAATAAGGTTTTCCTTGTCCGTTTCCTTTCAGCAGTCTTAACA
TTATGTGAAATTAACTTTTCAGCCAAAATTAAATCAGAGAAAAAACTTCAAGCCCTCTACATCG
TCTTTTTTTTTTTTTTTTTCATTTTTGGGAAAGGACCTGCCTGGCCTCAATGCCTACACACAGA
GCAGAGGTCGAATGGAGTTCATTAGCCTCATGTACCATAAGTAAAATGGCCAAGCATCTCTCCC
GGAGGATGTATTTCATTAATTCCTGTACATAGTGGGTCAGACATCCTCATTCCGGTCCATAATT
CTGGAATCTTCAGAACAGGGGCAAGCATAAATTCATTCACTTTTAAATAATATCTTATTTGGCT
AAACTCAAGGACAGCAGTTCTCTACCTGTAGGTTGTGACCCCTCTGGGGATCAAACAACTCCCA
GGGGCTGCCTAAGACACTGGAAAACACAGATATTTACATTATGATTTATAACAGTAACAAAATT
AGTTTTATGGTGGGGATCACAACATGAACTGTACTAAAGGGTCACAGCATTAGGTAGGTTGAGA
CCACTGCTCTTGGAGAACTTGTGGCTTAAAACTATTGCTTCCTGGTGATACTGGTATGGGCTAG
TCCATTTTGCCATTGCTGACATCCTCTTTCCTTGGGAAAAGTGGTTTCAACCCTTTAATCCCAG
CACTGGGGATGCAGAGGCAGGGAGGTCTCTTTGAGTTTAAGGCTAGCCTGGTCTACTCAGTAAG
TTCCATGACAGCCAGAACTACATAGTGAGACTCTGCTTTGAAAAACAACAGAAAACAAAACCAA
AACAAATGTACTCATCTGTAGAAATGTTCCTACATACACCTATATACACATAAGTAAAAATAAA
TCTTAAAAATGACCTCAAATGCTAATTTAGTTATTTAAAAACTGAAGAGTATCATCTTCTTGCT
CAATTCCCTCAATCATTGGGAACACTTTACAGTTTGTACCTGAAGCTTCTGCCTGGTCATAGAT
ACATGCCTGTAATTCCAACATTTGGGAGGCTGAGGCAGGAGTACTGGTTAGTGCCGATCTGGCC
TATAATGAGATCTGTGCCCGGGTTAAATAGAAGGATGCGTTAGATACATTTGGCAACTCCAGTG
CTCCTTTTGGACTGAGTTTTCAGCTCTTTTGACTGGGATAACTAAGTTATGAAAAGATCTTTAT
GTTCTACATCCAACTTAAGAATATCAGTTACTGAACAACATACCAGTTATAATCAAAATTCTCA
TCTTACTCATAAGTATCATCATTACACACTCTTACTTGTCAAACTTAAGAGGTATAGCTTGCTT
AAAATACCTATGTGTAAAGTTCTATTTTCTTAGAAACATGGATGTTTGTAACCATGGCTTTCAG
AGATTCTTACCACGTATTCTGTTTTACTGTGCTTTCATAGACTGTTATACCAGAGGTTTCCGAT
TATCAAAGTAATAACGTGTTTTAACTGCCTATATGTACCAGAGTTGTGAACAAGTCAAAACCAA
ACACACGCACTCTGAATAAAAGGGAGTTTGCAAACTAAA

hide sequence

RefSeq Acc Id:

XM_039081729 ⟹ XP_038937657

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	59,904,218 - 59,938,084 (-)	NCBI
mRatBN7.2	8	51,007,835 - 51,041,690 (-)	NCBI

RefSeq Acc Id:

XM_039081730 ⟹ XP_038937658

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	59,904,218 - 59,932,621 (-)	NCBI
mRatBN7.2	8	51,007,835 - 51,036,392 (-)	NCBI

RefSeq Acc Id:

XM_063265744 ⟹ XP_063121814

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	59,904,218 - 59,977,554 (-)	NCBI

RefSeq Acc Id:

XM_063265745 ⟹ XP_063121815

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	59,904,218 - 59,977,595 (-)	NCBI

RefSeq Acc Id:

XM_063265746 ⟹ XP_063121816

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	59,904,218 - 59,975,346 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001382076	(Get FASTA)	NCBI Sequence Viewer
	XP_008764517	(Get FASTA)	NCBI Sequence Viewer
	XP_008764518	(Get FASTA)	NCBI Sequence Viewer
	XP_017451220	(Get FASTA)	NCBI Sequence Viewer
	XP_017451221	(Get FASTA)	NCBI Sequence Viewer
	XP_017451222	(Get FASTA)	NCBI Sequence Viewer
	XP_038937657	(Get FASTA)	NCBI Sequence Viewer
	XP_038937658	(Get FASTA)	NCBI Sequence Viewer
	XP_063121814	(Get FASTA)	NCBI Sequence Viewer
	XP_063121815	(Get FASTA)	NCBI Sequence Viewer
	XP_063121816	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAX76925	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000037500
	ENSRNOP00000073690
	ENSRNOP00000085938
GenBank Protein	Q2VUH7	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_008764517 ⟸ XM_008766295
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QJF6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLACLTRGNLLDVLQEGFNEQQLQAYVAWVNAQLKKRPSVKPVQDLRQDLRDGVILAYLIEIVG VVDVVVFLLLTAGEKLSGVQLSPSNQQEMKSNVERVLQFVASKNIRMHQTSAKDIVEGNLKSIM RLVLALAAHFKPGSSRTVSQGRDSRTSVQSHQPHCATAVAQGAAAALADVCHDVSRSGRDVFRY RQRNASVDEEIENPYWSVRALVQQYEGQQRSPSESSCSSLTSPSPIHSAKSESIITQSEEKADF VIIPSEGIENRTDETGSPLSRDWRPGSPGTYLEATWEEQLLEQQEHLEKEMEEAKKMISGLQAL LLNGSLPEDEQERPVALCEPGVNPEEQLIIIRSRLDQSMEENQDLKKELLKCKQEARNLQGIKD ALQQRLTQQDTSVLQLKQELLRANMDKDELHNQNVDLQRKLDERNRLLGEYKKDLGQKDRLLQQ QQAKLEDALRKLSDASYQQVDLERELEQKDVLLAHRVKGDTDEVTNYNSHSSQRNGFVLPVAGR AATTATHRGPQSSDLQLVRDALRSLRNSFSGHDPQHHTIDSLEQGISSLIERLHVIETQKKQER KVRGRSPRNQASSEYRASWPPNSTLPHSQSSPAVSNTCTKVLYFTDRSLTPFMVNIPKRLGEVT LKDFKAAIDREGSHRYHFKALDPEFGTVKEEVFHDDDAIPGWEGKIVAWVEDHREN hide sequence

RefSeq Acc Id:	XP_008764518 ⟸ XM_008766296
- Peptide Label:	isoform X7
- UniProtKB:	A6J4E9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGGTQVKCLTSPSPIHSAKSESIITQSEEKADFVIIPSEGIENRTDETGSPLSRDWRPGSPGTY LEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVNPEEQLIII RSRLDQSMEENQDLKKELLKCKQEARNLQGIKDALQQRLTQQDTSVLQLKQELLRANMDKDELH NQNVDLQRKLDERNRLLGEYKKDLGQKDRLLQQQQAKLEDALRKLSDASYQQVDLERELEQKDV LLAHRVKGDTDEVTNYNSHSSQRNGFVLPVAGRAATTATHRGPQSSDLQLVRDALRSLRNSFSG HDPQHHTIDSLEQGISSLIERLHVIETQKKQERKVRGRSPRNQASSEYRASWPPNSTLPHSQSS PAVSNTCTKVLYFTDRSLTPFMVNIPKRLGEVTLKDFKAAIDREGSHRYHFKALDPEFGTVKEE VFHDDDAIPGWEGKIVAWVEDHREN hide sequence

RefSeq Acc Id:	XP_017451220 ⟸ XM_017595731
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K662 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGTQVVMRVCNSSLPGAPSQQLQAYVAWVNAQLKKRPSVKPVQDLRQDLRDGVILAYLIEIVGV VDVVVFLLLTAGEKLSGVQLSPSNQQEMKSNVERVLQFVASKNIRMHQTSAKDIVEGNLKSIMR LVLALAAHFKPGSSRTVSQGRDSRTSVQSHQPHCATAVAQGAAAALADVCHDVSRSGRDVFRYR QRNASVDEEIENPYWSVRALVQQYEGQQRSPSESSCSSLTSPSPIHSAKSESIITQSEEKADFV IIPSEGIENRTDETGSPLSRDWRPGSPGTYLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALL LNGSLPEDEQERPVALCEPGVNPEEQLIIIRSRLDQSMEENQDLKKELLKCKQEARNLQGIKDA LQQRLTQQDTSVLQLKQELLRANMDKDELHNQNVDLQRKLDERNRLLGEYKKDLGQKDRLLQQQ QAKLEDALRKLSDASYQQVDLERELEQKDVLLAHRVKGDTDEVTNYNSHSSQRNGFVLPVAGRA ATTATHRGPQSSDLQLVRDALRSLRNSFSGHDPQHHTIDSLEQGISSLIERLHVIETQKKQERK VRGRSPRNQASSEYRASWPPNSTLPHSQSSPAVSNTCTKVLYFTDRSLTPFMVNIPKRLGEVTL KDFKAAIDREGSHRYHFKALDPEFGTVKEEVFHDDDAIPGWEGKIVAWVEDHREN hide sequence

RefSeq Acc Id:	XP_017451222 ⟸ XM_017595733
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2K662 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKSNVERVLQFVASKNIRMHQTSAKDIVEGNLKSIMRLVLALAAHFKPGSSRTVSQGRDSRTSV QSHQPHCATAVAQGAAAALADVCHDVSRSGRDVFRYRQRNASVDEEIENPYWSVRALVQQYEGQ QRSPSESSCSSLTSPSPIHSAKSESIITQSEEKADFVIIPSEGIENRTDETGSPLSRDWRPGSP GTYLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVNPEEQL IIIRSRLDQSMEENQDLKKELLKCKQEARNLQGIKDALQQRLTQQDTSVLQLKQELLRANMDKD ELHNQNVDLQRKLDERNRLLGEYKKDLGQKDRLLQQQQAKLEDALRKLSDASYQQVDLERELEQ KDVLLAHRVKGDTDEVTNYNSHSSQRNGFVLPVAGRAATTATHRGPQSSDLQLVRDALRSLRNS FSGHDPQHHTIDSLEQGISSLIERLHVIETQKKQERKVRGRSPRNQASSEYRASWPPNSTLPHS QSSPAVSNTCTKVLYFTDRSLTPFMVNIPKRLGEVTLKDFKAAIDREGSHRYHFKALDPEFGTV KEEVFHDDDAIPGWEGKIVAWVEDHREN hide sequence

RefSeq Acc Id:	XP_017451221 ⟸ XM_017595732
- Peptide Label:	isoform X4
- UniProtKB:	A0A8L2QJF6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLACLTRGNLLDVLQEGFNEQQLQAYVAWVNAQLKKRPSVKPVQDLRQDLRDGVILAYLIEIVG EKLSGVQLSPSNQQEMKSNVERVLQFVASKNIRMHQTSAKDIVEGNLKSIMRLVLALAAHFKPG SSRTVSQGRDSRTSVQSHQPHCATAVAQGAAAALADVCHDVSRSGRDVFRYRQRNASVDEEIEN PYWSVRALVQQYEGQQRSPSESSCSSLTSPSPIHSAKSESIITQSEEKADFVIIPSEGIENRTD ETGSPLSRDWRPGSPGTYLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQER PVALCEPGVNPEEQLIIIRSRLDQSMEENQDLKKELLKCKQEARNLQGIKDALQQRLTQQDTSV LQLKQELLRANMDKDELHNQNVDLQRKLDERNRLLGEYKKDLGQKDRLLQQQQAKLEDALRKLS DASYQQVDLERELEQKDVLLAHRVKGDTDEVTNYNSHSSQRNGFVLPVAGRAATTATHRGPQSS DLQLVRDALRSLRNSFSGHDPQHHTIDSLEQGISSLIERLHVIETQKKQERKVRGRSPRNQASS EYRASWPPNSTLPHSQSSPAVSNTCTKVLYFTDRSLTPFMVNIPKRLGEVTLKDFKAAIDREGS HRYHFKALDPEFGTVKEEVFHDDDAIPGWEGKIVAWVEDHREN hide sequence

Ensembl Acc Id:

ENSRNOP00000073690 ⟸ ENSRNOT00000083102

Ensembl Acc Id:

ENSRNOP00000037500 ⟸ ENSRNOT00000039045

RefSeq Acc Id:	XP_038937657 ⟸ XM_039081729
- Peptide Label:	isoform X6
- UniProtKB:	A6J4E9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038937658 ⟸ XM_039081730
- Peptide Label:	isoform X8
- UniProtKB:	A6J4E9 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000095631 ⟸ ENSRNOT00000114265

Ensembl Acc Id:

ENSRNOP00000085938 ⟸ ENSRNOT00000100212

Ensembl Acc Id:

ENSRNOP00000084790 ⟸ ENSRNOT00000109900

RefSeq Acc Id:	NP_001382076 ⟸ NM_001395147
- UniProtKB:	Q2VUH7 (UniProtKB/Swiss-Prot), A0A8L2QJF6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121815 ⟸ XM_063265745
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K662 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121814 ⟸ XM_063265744
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K662 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121816 ⟸ XM_063265746
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2K662 (UniProtKB/TrEMBL)

Protein Domains

Calponin-homology (CH) DIX

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q2VUH7-F1-model_v2	AlphaFold	Q2VUH7	1-684	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309902	AgrOrtholog
BioCyc Gene	G2FUF-30555	BioCyc
Ensembl Genes	ENSRNOG00000010260	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000039045	ENTREZGENE
	ENSRNOT00000083102	ENTREZGENE
	ENSRNOT00000100212	ENTREZGENE
Gene3D-CATH	1.10.418.10	UniProtKB/Swiss-Prot
	2.40.240.130	UniProtKB/Swiss-Prot
InterPro	CH-domain	UniProtKB/Swiss-Prot
	CH_dom_sf	UniProtKB/Swiss-Prot
	DIX	UniProtKB/Swiss-Prot
	DIX_dom_sf	UniProtKB/Swiss-Prot
	Dsh/Dvl-rel	UniProtKB/Swiss-Prot
	Ubiquitin-like_domsf	UniProtKB/Swiss-Prot
NCBI Gene	363062	ENTREZGENE
PANTHER	PTHR10878	UniProtKB/Swiss-Prot
	PTHR10878:SF22	UniProtKB/Swiss-Prot
Pfam	DIX	UniProtKB/Swiss-Prot
	PF00307	UniProtKB/Swiss-Prot
PhenoGen	Dixdc1	PhenoGen
PROSITE	DIX	UniProtKB/Swiss-Prot
	PS50021	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000010260	RatGTEx
SMART	DAX	UniProtKB/Swiss-Prot
	SM00033	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF47576	UniProtKB/Swiss-Prot
	SSF54236	UniProtKB/Swiss-Prot
UniProt	A0A0G2K662	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A4R3_RAT	UniProtKB/TrEMBL
	A0A8I6ANQ8_RAT	UniProtKB/TrEMBL
	A0A8I6GB10_RAT	UniProtKB/TrEMBL
	A0A8L2QJF6	ENTREZGENE, UniProtKB/TrEMBL
	A6J4E9	ENTREZGENE, UniProtKB/TrEMBL
	DIXC1_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2006-03-07	Dixdc1	DIX domain containing 1	Dixdc1_predicted	DIX domain containing 1 (predicted)	Symbol and Name status set to approved	1299863	APPROVED
2005-01-12	Dixdc1_predicted	DIX domain containing 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

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