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Gene: Baz2b (bromodomain adjacent to zinc finger domain, 2B) Rattus norvegicus

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Symbol:

Baz2b

Name:

bromodomain adjacent to zinc finger domain, 2B

RGD ID:

1309801

Description:

Predicted to enable DNA binding activity and zinc ion binding activity. Predicted to be located in nucleus. Predicted to be active in chromatin. Orthologous to human BAZ2B (bromodomain adjacent to zinc finger domain 2B); INTERACTS WITH 17beta-estradiol; 2,6-dinitrotoluene; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

bromodomain adjacent to zinc finger domain protein 2B; LOC317627

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	64,792,984 - 65,034,547 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	64,794,001 - 65,001,781 (-)	Ensembl				GRCr8
mRatBN7.2	3	44,384,282 - 44,681,619 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	44,385,474 - 44,592,908 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	47,741,609 - 47,982,579 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	56,325,177 - 56,566,158 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	54,095,287 - 54,335,659 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	3	62,628,411 - 62,869,405 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	3	69,630,503 - 69,870,873 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	3	61,536,097 - 61,776,465 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	3	42,766,095 - 43,006,447 (-)	NCBI		F344_StmMcwi
Rnor_6.0	3	45,968,845 - 46,286,915 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	45,968,825 - 46,153,371 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	51,196,815 - 51,338,843 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	3	51,081,857 - 51,162,796 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	41,617,500 - 41,859,791 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	42,430,535 - 42,670,212 (-)	NCBI		Celera
RGSC_v3.1	3	41,512,679 - 41,617,013 (-)	NCBI
Cytogenetic Map	3	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

genetic disease (ISO)

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP,ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4,4'-trichlorobiphenyl (ISO)

2,6-dinitrotoluene (EXP)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acrolein (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

amitrole (EXP)

amphetamine (EXP)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

Benzo[k]fluoranthene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

Butylbenzyl phthalate (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

carbon nanotube (ISO)

chloroprene (EXP)

chromium(6+) (ISO)

cisplatin (ISO)

clorgyline (ISO)

cobalt dichloride (ISO)

cocaine (EXP)

copper(II) sulfate (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (ISO)

dorsomorphin (ISO)

entinostat (ISO)

epoxiconazole (ISO)

ethanol (ISO)

folic acid (ISO)

formaldehyde (ISO)

FR900359 (ISO)

fructose (EXP)

fulvestrant (ISO)

gentamycin (EXP)

geraniol (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methimazole (EXP)

methoxychlor (EXP)

okadaic acid (ISO)

oxaliplatin (EXP)

ozone (ISO)

paracetamol (ISO)

PCB138 (ISO)

phenobarbital (EXP,ISO)

potassium chromate (ISO)

quercetin (ISO)

resveratrol (ISO)

SB 431542 (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

succimer (ISO)

topotecan (EXP)

trichloroethene (EXP)

triptonide (ISO)

troglitazone (ISO)

tungsten (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA-templated transcription (IEA)

Cellular Component

chromatin (IBA)

nucleus (IEA,ISO)

Molecular Function

DNA binding (IEA)

metal ion binding (IEA)

protein binding (ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932

Genomics

Comparative Map Data

Baz2b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	64,792,984 - 65,034,547 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	64,794,001 - 65,001,781 (-)	Ensembl				GRCr8
mRatBN7.2	3	44,384,282 - 44,681,619 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	44,385,474 - 44,592,908 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	47,741,609 - 47,982,579 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	56,325,177 - 56,566,158 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	54,095,287 - 54,335,659 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	3	62,628,411 - 62,869,405 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	3	69,630,503 - 69,870,873 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	3	61,536,097 - 61,776,465 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	3	42,766,095 - 43,006,447 (-)	NCBI		F344_StmMcwi
Rnor_6.0	3	45,968,845 - 46,286,915 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	45,968,825 - 46,153,371 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	51,196,815 - 51,338,843 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	3	51,081,857 - 51,162,796 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	41,617,500 - 41,859,791 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	42,430,535 - 42,670,212 (-)	NCBI		Celera
RGSC_v3.1	3	41,512,679 - 41,617,013 (-)	NCBI
Cytogenetic Map	3	q21	NCBI

BAZ2B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	159,315,312 - 159,712,442 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	159,315,312 - 159,617,282 (-)	Ensembl			hg38	GRCh38
GRCh37	2	160,175,490 - 160,568,953 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	159,883,736 - 160,181,305 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	2	160,000,998 - 160,128,996	NCBI
Celera	2	153,787,429 - 154,084,921 (-)	NCBI		Celera
Cytogenetic Map	2	q24.2	NCBI
HuRef	2	152,059,204 - 152,356,919 (-)	NCBI		HuRef
CHM1_1	2	160,181,389 - 160,479,489 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	159,772,618 - 160,169,805 (-)	NCBI		T2T-CHM13v2.0

Baz2b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	59,729,707 - 60,040,243 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	59,729,707 - 60,040,183 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	59,899,363 - 60,209,913 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	59,899,363 - 60,209,839 (-)	Ensembl			mm10	GRCm38
MGSCv37	2	59,737,420 - 59,963,797 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	59,700,202 - 59,926,579 (-)	NCBI		MGSCv36	mm8
Celera	2	61,594,999 - 61,820,803 (-)	NCBI		Celera
Cytogenetic Map	2	C1.1	NCBI
cM Map	2	34.18	NCBI

Baz2b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955449	14,140,699 - 14,276,933 (+)	Ensembl
ChiLan1.0	NW_004955449	14,008,538 - 14,278,227 (+)	NCBI	ChiLan1.0	ChiLan1.0

BAZ2B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	62,004,430 - 62,403,627 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	62,015,782 - 62,418,594 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	46,604,986 - 46,929,050 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	163,976,008 - 164,377,473 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	163,980,886 - 164,146,146 (-)	Ensembl			panPan2	panpan1.1

BAZ2B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	36	5,083,273 - 5,306,317 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	36	5,086,530 - 5,479,813 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	36	5,224,284 - 5,517,073 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	36	5,207,998 - 5,501,122 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	36	5,209,210 - 5,384,509 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	36	5,226,159 - 5,519,092 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	36	5,268,761 - 5,561,717 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	36	5,311,475 - 5,604,664 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Baz2b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	122,254,131 - 122,600,846 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936469	19,224,475 - 19,362,346 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936469	19,106,421 - 19,363,668 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

BAZ2B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	66,254,948 - 66,571,077 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	15	66,254,888 - 66,411,261 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	73,484,177 - 73,887,256 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

BAZ2B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	44,703,711 - 45,029,751 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	44,700,082 - 44,962,340 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666040	154,459,304 - 154,866,209 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Baz2b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624732	6,087,726 - 6,344,846 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624732	5,928,127 - 6,344,173 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Baz2b
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	37,598,658 - 37,886,789 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Baz2b
1612 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	7
Count of miRNA genes:	7
Interacting mature miRNAs:	7
Transcripts:	ENSRNOT00000056440
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10401810	Kidm53	Kidney mass QTL 53			kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	28625339	67641995	Rat
2298542	Neuinf11	Neuroinflammation QTL 11	3.9		nervous system integrity trait (VT:0010566)	spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)	3	35403199	97383526	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	58601291	153936591	Rat
631832	Sach1	Saccharin preference QTL 1	2.7	0.02	consumption behavior trait (VT:0002069)	calculated saccharin drink intake volume (CMO:0001600)	3	47904172	92904172	Rat
737818	Hcar12	Hepatocarcinoma resistance QTL 12	2.6		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	3	49872657	138829559	Rat
9590286	Uminl1	Urine mineral level QTL 1	3.5	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	3	48657744	93657744	Rat
10450816	Scl75	Serum cholesterol level QTL 75	4.4	0.001	blood LDL cholesterol amount (VT:0000181)	blood low density lipoprotein cholesterol level (CMO:0000053)	3	58601291	71157804	Rat
4889966	Bss95	Bone structure and strength QTL 95	4.4		tibia area (VT:1000281)	tibia-fibula cross-sectional area (CMO:0001718)	3	37796919	82796919	Rat
2313093	Bmd77	Bone mineral density QTL 77	2.2	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	3	47904172	70710963	Rat
12879852	Cm93	Cardiac mass QTL 93		0.001	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	3	38708931	67641995	Rat
12879853	Am5	Aortic mass QTL 5		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	3	38708931	67641995	Rat
12879854	Kidm63	Kidney mass QTL 63		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	38708931	67641995	Rat
61356	Bp37	Blood pressure QTL 37	3		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	3	51092561	96092561	Rat
1358905	Hrtrt17	Heart rate QTL 17	5.9	0.000014	heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	36721849	110333156	Rat
12879849	Bw180	Body weight QTL 180		0.037	body mass (VT:0001259)	body weight (CMO:0000012)	3	38708931	67641995	Rat
12879850	Cm91	Cardiac mass QTL 91		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	3	38708931	67641995	Rat
2313101	Bmd76	Bone mineral density QTL 76	3.6	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	3	47904172	70710963	Rat
12879851	Cm92	Cardiac mass QTL 92		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	38708931	67641995	Rat
731172	Bp151	Blood pressure QTL 151		0.04	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	38708931	67641995	Rat
8694196	Abfw2	Abdominal fat weight QTL 2	16.58	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	3	48657744	93657744	Rat
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	1	141509147	Rat
2290452	Scl56	Serum cholesterol level QTL 56	2.26		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	3	36101403	81101403	Rat
10450852	Stl33	Serum triglyceride level QTL 33	3.4	0.05	blood LDL triglyceride amount (VT:0010699)	blood lipoprotein triglyceride level (CMO:0002685)	3	58601291	71157804	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	5675975	141509147	Rat
4889975	Bmd81	Bone mineral density QTL 81	4.3		tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	3	59119402	70710963	Rat
1300178	Hrtrt4	Heart rate QTL 4	3.74		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	51490129	111359995	Rat
634317	Bw117	Body weight QTL 117	3.58		abdominal fat pad mass (VT:1000711)	abdominal fat pad weight to body weight ratio (CMO:0000095)	3	59863663	73704481	Rat
1331795	Rf30	Renal function QTL 30	3.708		urine potassium amount (VT:0010539)	urine potassium level (CMO:0000128)	3	59863663	87321459	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
1354589	Bw31	Body weight QTL 31	3.3		body mass (VT:0001259)	body weight (CMO:0000012)	3	53651826	98651826	Rat
2303593	Gluco46	Glucose level QTL 46	3		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	48876619	93876619	Rat
1354590	Despr11	Despair related QTL 11		0.000031	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	3	48876619	93876619	Rat
2313079	Bss73	Bone structure and strength QTL 73	1.5		tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	3	47904172	70710963	Rat
1331777	Bw24	Body weight QTL 24	3.503		body mass (VT:0001259)	body weight (CMO:0000012)	3	59863663	87321459	Rat
631647	Bp122	Blood pressure QTL 122	6.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	51092561	96092561	Rat
2313076	Bss74	Bone structure and strength QTL 74	2	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	3	47904172	70710963	Rat
1300169	Bp177	Blood pressure QTL 177	2.96		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	3	36425116	81425116	Rat
10450813	Scl74	Serum cholesterol level QTL 74	5.8	0.001	blood LDL cholesterol amount (VT:0000181)	blood low density lipoprotein cholesterol level (CMO:0000053)	3	58601291	71157804	Rat
2302276	Bw82	Body weight QTL 82	4.32		body mass (VT:0001259)	body weight (CMO:0000012)	3	59863663	83358329	Rat
738019	Anxrr10	Anxiety related response QTL 10	3.9		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	3	58925062	103925062	Rat
9590136	Scort3	Serum corticosterone level QTL 3	23.37	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	48657744	93657744	Rat
61419	Cia11	Collagen induced arthritis QTL 11	5.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	3	50766145	95766145	Rat
1558650	Cm48	Cardiac mass QTL 48	4	0.0001	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	3	50766145	95766145	Rat
1354597	Kidm13	Kidney mass QTL 13	2.9		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	3	42158111	124558371	Rat
2325840	Bp345	Blood pressure QTL 345		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	38708931	83708931	Rat
8552950	Pigfal12	Plasma insulin-like growth factor 1 level QTL 12	7.3		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	3	48657744	93657744	Rat
631676	Cm8	Cardiac mass QTL 8	7.03	0.0001	aorta mass (VT:0002845)	aorta weight (CMO:0000076)	3	37363734	82363734	Rat
8694386	Bw159	Body weight QTL 159	4.52	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	3	48657744	93657744	Rat
1354604	Bw36	Body weight QTL 36	2.9		body mass (VT:0001259)	body weight (CMO:0000012)	3	42158111	124558371	Rat
2313049	Bss72	Bone structure and strength QTL 72	2.6	0.0001	tibia area (VT:1000281)	tibia midshaft cross-sectional area (CMO:0001717)	3	47904172	70710963	Rat

Markers in Region

D3Rat274

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	3	64,865,026 - 64,865,229 (+)	Marker Load Pipeline
mRatBN7.2	3	44,456,324 - 44,456,527 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	46,040,887 - 46,041,089	NCBI	Rnor6.0
Rnor_5.0	3	51,152,707 - 51,152,909	UniSTS	Rnor5.0
RGSC_v3.4	3	41,688,351 - 41,688,553	UniSTS	RGSC3.4
RGSC_v3.4	3	41,688,350 - 41,688,554	RGD	RGSC3.4
Celera	3	42,501,443 - 42,501,631	UniSTS
RGSC_v3.1	3	41,584,722 - 41,584,926	RGD
SHRSP x BN Map	3	32.8199	UniSTS
SHRSP x BN Map	3	32.8199	RGD
Cytogenetic Map	3	q21	UniSTS

D3Got244

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	44,516,337 - 44,516,463 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	46,120,635 - 46,120,760	NCBI	Rnor6.0
Rnor_5.0	3	51,229,775 - 51,229,900	UniSTS	Rnor5.0
RGSC_v3.4	3	41,750,389 - 41,750,514	UniSTS	RGSC3.4
Celera	3	42,561,055 - 42,561,180	UniSTS
Cytogenetic Map	3	q21	UniSTS

RH144325

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	44,385,140 - 44,385,252 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	45,969,704 - 45,969,815	NCBI	Rnor6.0
Rnor_5.0	3	51,081,524 - 51,081,635	UniSTS	Rnor5.0
RGSC_v3.4	3	41,617,167 - 41,617,278	UniSTS	RGSC3.4
Celera	3	42,430,202 - 42,430,313	UniSTS
RH 3.4 Map	3	563.9	UniSTS
Cytogenetic Map	3	q21	UniSTS

RH139050

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	44,384,526 - 44,384,669 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	45,969,090 - 45,969,232	NCBI	Rnor6.0
Rnor_5.0	3	51,080,910 - 51,081,052	UniSTS	Rnor5.0
RGSC_v3.4	3	41,616,553 - 41,616,695	UniSTS	RGSC3.4
Celera	3	42,429,588 - 42,429,730	UniSTS
RH 3.4 Map	3	562.63	UniSTS
Cytogenetic Map	3	q21	UniSTS

AA800330

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	3	65,011,225 - 65,011,389 (+)	Marker Load Pipeline
mRatBN7.2	3	44,602,524 - 44,602,688 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	46,206,817 - 46,206,980	NCBI	Rnor6.0
Rnor_5.0	3	51,315,957 - 51,316,120	UniSTS	Rnor5.0
RGSC_v3.4	3	41,836,571 - 41,836,734	UniSTS	RGSC3.4
Celera	3	42,647,254 - 42,647,417	UniSTS
RH 3.4 Map	3	593.1	UniSTS
Cytogenetic Map	3	q21	UniSTS

MARC_17149-17150:1028234160:1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	44,592,595 - 44,592,957 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	46,196,888 - 46,197,249	NCBI	Rnor6.0
Rnor_5.0	3	51,306,028 - 51,306,389	UniSTS	Rnor5.0
RGSC_v3.4	3	41,826,642 - 41,827,003	UniSTS	RGSC3.4
Celera	3	42,637,519 - 42,637,880	UniSTS
Cytogenetic Map	3	q21	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108260	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761847	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761848	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761849	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761850	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761851	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761852	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761857	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591862	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591863	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591864	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591865	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283999	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284000	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284030	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284031	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284032	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284033	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284040	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284041	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284042	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284043	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284044	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284046	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC158852	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473983	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000081302 ⟹ ENSRNOP00000071727

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	64,794,176 - 65,001,781 (-)	Ensembl
mRatBN7.2 Ensembl	3	44,385,474 - 44,592,908 (-)	Ensembl
Rnor_6.0 Ensembl	3	45,970,037 - 46,051,096 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000085885 ⟹ ENSRNOP00000073275

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	44,385,474 - 44,486,591 (-)	Ensembl
Rnor_6.0 Ensembl	3	45,968,825 - 46,153,371 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102229 ⟹ ENSRNOP00000091778

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	44,385,474 - 44,466,691 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000110670 ⟹ ENSRNOP00000087832

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	64,794,001 - 65,001,631 (-)	Ensembl
mRatBN7.2 Ensembl	3	44,385,474 - 44,592,908 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000120737 ⟹ ENSRNOP00000098362

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	64,794,176 - 64,919,960 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000120738 ⟹ ENSRNOP00000098363

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	64,794,001 - 65,001,781 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000120739 ⟹ ENSRNOP00000098364

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	64,794,176 - 65,001,589 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000120741 ⟹ ENSRNOP00000098366

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	64,794,001 - 65,001,781 (-)	Ensembl

RefSeq Acc Id:

NM_001108260 ⟹ NP_001101730

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,794,176 - 65,034,547 (-)	NCBI
mRatBN7.2	3	44,385,474 - 44,625,848 (-)	NCBI
Dahl_SR_JrHsd	3	62,628,411 - 62,869,405 (-)	NCBI
Lyon_Normotensive	3	69,630,503 - 69,870,873 (-)	NCBI
Lyon_Hypertensive	3	61,536,097 - 61,776,465 (-)	NCBI
F344_StmMcwi	3	42,766,095 - 43,006,447 (-)	NCBI
Rnor_6.0	3	45,970,037 - 46,230,128 (-)	NCBI
Rnor_5.0	3	51,081,857 - 51,162,796 (-)	NCBI
Rnor_5.0	3	51,196,815 - 51,338,843 (-)	NCBI
RGSC_v3.4	3	41,617,500 - 41,859,791 (-)	RGD
Celera	3	42,430,535 - 42,670,212 (-)	RGD

Sequence:

show sequence

CGCAGACCTGTGCTACCAGAAGTGACAATGGAAGTCCCTCCTGTGAAGAGGAAAGGACCCTAAC
AGAAAGTGAGGATCCTCAGGAGCAAGTGGAGGTCAGCAGACATGCAACTTTCATTGTTAGAGAG
AGGAGAGAGAGAGAAGCCTTGTTGGTTGACGTCACTTGGTTCATGAAGCCTTCGCCTAGAAGTG
AAGCTGCTGAACAAACCTTGCGAAGAATCATCTCCTGCTTCAATCTGCTGCCGGATAGGAACTA
ATCAGAGAGAGAGCGGCGGAAGACGGGGACGGAGGGAGCCAGGGCTTTCGCGATCACGGATCTC
ACCTCCACTCCAACTCCCTAGACTTTCTTGCAGAAATTATAAGAGAAATAAGGAGGCGGTGGGG
ATTCGAAAAGCTTAGCCCGCACCCGGGAAGGGCGAAAATCCCTTTCCCCGCAACTCAGTTCGAA
AGTGAAGGTTTCCCAACAGTGATGTCACAAGATTGACCACACTGACACAAGATGGAGTCTGGAG
AACGGTTGCCGTCCTCACCAGCCCCTTCCACTACACCAACATCGTCGGCTCCTTCCGTGGCTTC
AGCCGTTTCTAAGAGCAGCCTTCCCACGGGAGCTGCTTCACTTGGCTCTGCAGCCAGCCCATGT
GTTCTTGAAGCTGGGAAGTCCAAGATCAAGGTTTCACCTGACTCAGTGTCTGGACATTTATTCA
GAGCAGCTGGGGATCAGCCGTTTAACCTGTCCACAGTGCCGAGTGCCTTCCCAATGGTCAGCCA
CCCAGTCTTTGGTCTACATTCAGCCAGCTCAGGGCATTCAGAATTTGGTGGCTTGGGGACACTT
GGTACACCCACAGCCTTAGCCGTACATCCCCAGCTAACATCTTTTCCAGGTGCAGAGTGGTGGC
GAACCACAGATGGTCACTCTCGTGCAGGAACGCCCTTCTTTCCTCCATTACTGGGAATTCCACC
ACTGTTTGCTCCTCCAGCCCAGAATCACGATTCGTCATTCCATTCAAGGACTTCTGGGAAGAGC
AATCGAAATGGTCCCGAAAAAGGTATAAATGGGTCAGTTAATGGAAACAGTGCAGCATCTGTAC
ATGGTGTCAATACATCTGGACTGTCCACTCCTGCTTCAAGTTCCATGGGACAGAATCAAAGCAC
AAGCTCAGGTGGAGGAAACCTAAAATGTCATCAGGAACAAAACAAAAGCCAGCCTGTGGATGCC
AGAGCCGACAAAATCAAAGATAAGAAACCAAGGAAGAAGGCTATGGAAAGTTCTAGCAACAGTG
ATAGTGACTCAGGCACATCGTCAGACACCTCGAGTGAAGGCATTAGCAGCAGTGACTCTGACGA
TCTGGAAGAGGAAGAGGAGGAAGATCAAAGTATTGAGGAGAGTGAAGACGATGATTCTGACTCA
GAGACTGAAGCACAACACAAAAGTAACAACCAGGTGCTATTACATGGTATTTCAGACCCCAAAA
CAGATGGACAGAAAGCAAGTGAAAAAGCCCAGGAAAGAAGAACACACCAGCCATTACCTCCTGT
GTCTGAGCCCCAGACGCACCCATCATTCCAGTCCCAGCAGAAGCAGCCTCAGGTTCTGTCACAG
CAGCTTCCATTTATTTTCCAAAGCTCTCAGGCAAAGGAGGAGTCTGTGACCAAACACACCAGTG
TAATACAGTCGACGGGATTGGTGTCCAATGTGAAACCTTTGTCTTTGGTAAATCAAGCCAAAAA
GGAACCTTACAGGAAACTCGTAGTTCCTTCTCCTGATGTACTTAAAGCAGGGAATAAAAATACC
TCTGAAGAATCTAGTTCTTTGACCAGTGAATTGCGATCCAAACGGGAACAATATAAGCAGACAT
TCCCATCCCAAGTAAAGAAACAGGAGTCGGGGAGGAGCCTGAAGAAGGTTATTGCAGCTTTGTC
AAGTACGAAAGCAACCTCTAGTCCACCAGCACATCCAAAACTACCACTAGACAACAACCACCCT
AATCCATTTTTGACAAATGCACTTTTAGGGAATCACCAACCAAATGGAGTCATTCAGAGCGTCA
TTCAAGAAGCTCCGTTAGCACTAACTACCAAAACGAAAATGCAGAGCAAGATTAACGAGAACGT
CTCCACTAGCACCCCCTTCTCCTCACCTGTCAATCTGAGCACGGGTGGGAGGAGAACTCCTGGC
AGTCAGGCCCCTGCGCTGCCCTCCGCCTCACCCATCCTGCACAGTAGCGGGAAGGAGAAGCGCG
TCAGCACTGACGCAGCCCCGCTGAAAGGGCACCATCACCCCCATCCGGCAACGTCGTTGGTGGA
ACAGTTTAGAGGAACAGATTCAGACATTCCCAGTAGTAAAGACTCGGAGGATTCAAATGAGGAT
GAGGAGGAAGATGAGGAGGAGGAAGATGAAGAGGATGATGAAGACGACGAGTCTGATGACAGTC
AATCAGAATCAGATAGTAATTCAGAATCAGATTCAGAAGGCTCAGAAGACGACGATGAGAAAGA
CCAGGAGGAATCAGATAGTGACACTGAAGGCGCGAAACCTGCCGTGAACCTGACTCAGACAAGC
TCCTCTGCCAAAAGCCCTCCCTCCAGTCTCACAGCGCACTCAGCACCTCACAACCTCCACATAG
GAGGCCCCCCAGGCTCTGCTCCTGCTGCCCTGTGCTCTGAGTCCCAGCCTCCTGCTTTTCTTGG
CACTTCTTCTTCCACACTCACTTCAAGTCCACACTCTGGTACGTCCAAACGAAGAAGAGTGGCC
GATGACCACGAGCTGCGCATTCCTCTGGACTACGGCTGGCAGAGAGAGACCAGGGTGAGGAACT
TCGGTGGGCGCCTTCCAGGAGAAGTCACGTATTATGCCCCGTGTGGAAAGAAGCTCAGGCAGTA
CCCTGACATGATAAAGGGAATGCAGTGGTGTCTTTTGAAAGAAGAGGATGTCATTCCTCGTATC
AGGGCAATGGACGGCCGAAGAGGAAGACCACCCAATCCAGATAGACCAAGAGCAAGAGAGGAAT
CCAGGATGAAACGCCGGAAGGGTCGCCCTCCCAATGTTGGCAGTGCCGAATTCCTAGATAACAC
AGATGCAAAACTACTAAGGAAACTGCAGGCTCAAGAAATAGCCAGACAGGCAGCACAAATAAAA
CTTCTGAGAAAACTTCAAAAGCAGGAACAGGCACGGGTTGCCAAAGAAGCTAAAAAACAACAAG
CAATAATGGCTGCTGAAGAGAAGCGGAAGCAGAAAGAACAAATGAAGATGCTGAAGCAGCAGGA
AAAAATTAAGAGAATACAGCAAATCAGAATGGAAAAAGAACTCCGAGCTCAGCAGATTCTTGAG
GCTAAAAAGAAAAAGAAGGAAGAAGCAGCAAATGCCAAATTATTGGAGGCCGAGAAACGAACCA
AGGAGAAAGAACTGAGAAGACAGCAGGCTGTCCTTCTGAAACACCAGGAGTTGGAGAGGCATAG
ACTAGATATGGAACGGGAGCGAAGGCGACAGCATATGATGCTTATGAAAGCTATGGAAGCTCGT
AAAAAAGCAGAAGAAAAAGAACGATTGAAGCAAGAGAAACGTGATGAGAAAAGATTGAATAAGG
AACGCAAACTAGAGCAACGGAGATTGGAGTTAGAAATGGCGAAGGAGCTTAAGAAACCCAAGGA
AGACATGTGCTTAGCAGACCAAAAGCCCTTGCCAGAGTGGCCTCGCATCCCGGGACTTGTGCTC
TCTGGAACCACATTTTCAGACTGTCTCATGGTGGTGCAGTTCTTACGAAACTTTGGTAAAGTTT
TGGGCTTTGATGTGAATATTGATGTTCCAAACCTCAGTGTTCTTCAAGAGGGATTGCTAAATAT
AGGGGACAGCATGGGTGAAGTACAAGACTTGCTTGTGAGGCTCCTCTCAGCTGCTGTATGTGAT
CCAGGTCTAATTACAGGATACAAGGCAAAAACCGCTCTTGGAGAACATTTGCTGAATGTTGGTG
TGAACCGAGACAATGTGTCCGAGGTTTTGCAGATTTTCATGGAAGCCCACTGTGGACAGACTGA
GCTGACCGAGAGCCTGAAGACTAAAGCGTTTCAGGCTCACACTCCAGCACAGAAAGCGTCCATC
CTGGCCTTCCTTGTTAATGAGCTGGCGTGTAGCAAGAGTGTGGTGAGTGAGATTGACAAGAACA
TTGAGTACATGTCCAACTTGAGAAGAGACAAGTGGGTGGTGGAAGGTAAACTCCGCAAGCTTAG
GATAATCCATGCTAAGAAAACAGGCAAGAGAGATGCTTCAGGGGGCATTGATCTTGGGGAAGAG
CAACATCCCTTGGGCACGCCGACTCCAGGACGCAAGCGGAGAAGGAAGGGAGGAGACAGTGATT
ATGATGATGATGACGATGATGACAGCGATGACCAAGCCGATGAGGATGAGGAAGATGACGAAGA
TAAGGATGACAAAAAAGGAAAGAAGACCGATATCTGCGAAGATGAGGATGAAGGTGACCAAACA
GCCAGTGTTGAGGAGCTCGAAAAGCAGATTGAAAAACTGAGCAAGCAACAGAGCCAGTACAGAC
GGAAGCTCTTTGATGCTTCTCACTCATTACGCTCGATGATGTTTGGCCAGGACCGATACCGACG
CAGATACTGGATTCTTCCTCAGTGTGGAGGGATTTTTGTAGAAGGCATGGAAAGCGGTGAAGGC
CTAGAAGAAATTGCAAAAGAAAAAGAAAAGCTTAAAAAGGCCGAGAGTCTCCAGATCAAAGAAG
AAGTGTTCGAGACTTCTACAGACACTTTAAACTGTCCCACCAGAGATCACTGTGAGCAGAAGGA
CGACCTGAAAGAGAAAGATAACACGAATCTATTTCTTCAGAAACCGGGCTCGTTCTCCAAGCTA
AGCAAGCTTTTGGAGGTAGCTAAAATGCCTCCCGAGTCAGATGTTATGACTCCCCCAAAAGTGA
ACGTTAGTACAAATGGGGGCCCACTGTCTCATCAGAACAGCGGGAAGCATGCACTGGGAAGCAT
TCCCTCAGCAGCGGCACAGAGCCCCGTGGGGAAGACAGACGTCAGTCTGTTCAGCTCGGGCTCT
GGTAGTTGTGGGAAGTTCTACAGTCCTCTCCCCAATGACCAGCTGTTAAAAACGCTGACTGAAA
AGAACCGGCAGTGGTTTAGCCTTTTGCCAAAAACACCTTGTGATGACACGTCCCTGACCCACGC
TGACCTGTCCGCCAGTTCGGTGACTCCTCAGTCTCAGCCACCATCTAAGTCACCGTCGCCTGCT
CCAGCTCCACTGCTCGCATCCTCGTCCGTTCAGAACCCGGCCGGACTGAACCCGTTTGCTCTGT
CACCTCTTCAGGTGAAGAGTGGTGTGTCTATGATGGGACTTCAGTTCTGTGGGTGGCCTGCTGG
TGTGCTCACTTCCAGTGTCCCATTTACATCACCCTTGCCTGGTCTCGGCTCAGGGTTGGGACTG
CCAGAAGGAAATGGTAGCAGCTCATTCTTGAATTCCAGTGTTGCTTCCAGTAAAAGTGAATCTC
CAATCCCTCCAGCTGAAAAGGCCTCCACCGCCACACCAGCCGCTGTTGAAGTAGCAAAACCAGT
AGATTTTCCTATTCCGAAGCCTATCCCAGAAGAGATGCAGCTCGGCTGGTGGAGAATCATGGAC
CCCGAGGACCTGAGGACGTTGCTGAAGGTGCTGCACCTCCGAGGGCTACGGGAAAAGGCCCTGC
AGAAGCAAGTGCAGAAGCACCTGGACTACATTACTCACGCCTGTGCCAAGAATAAGGACGTTGC
TATTATTGAATTAAATGAGAATGAAGAAAATCAGGTAACGCGCGATTTAGTGGAGAACTGGTCG
GTAGAAGAGCAGGCGATGGAGCTGGACCTGAGCATTCTCCAGCAAGTGGAGGACCTGGAACGCA
GGGTTGCATCCGCAAGCTTGCAAGTGAAGGGTTGGATGTGTCCAGAGCCTGCGTCAGAAAGGGA
GGACTTGGTATATTTTGAACATAAGTCATTTACTAAGTTGTCCAAGGAGCATGATGGAGAACTT
ACTGGTGACGAAGAAAACAGTGCTCATGCACTGGCACGGAAGAGTGACAACCCCCTAGATATAG
CTGTAACCAGGCTGGCTGATTTGGAGCGGAACATTGAGAGAAGGTATCTGAAGAGCCCCTTAAG
TACCACCATTCAGATCAAACTGGATAATGTGGGCACAGTTACTGTCCCTGCTCCTGCACCATCC
ATTAGTGGTGATGGTGACGGAGTTGAAGAGGACATTGCTCCAGGGCTCAGGGTCTGGAGAAGGG
CGTTAGCAGAGGCTCGCAGTGCTGCACAGGTAGCCCTGTGCATCCAGCAGTTACAGAGATCAAT
AGCATGGGAAAAATCAATTATGAAAGTTTACTGCCAGATCTGTCGAAAGGGAGACAATGAGGAA
CTGCTGCTACTCTGTGACGGCTGTGACAAAGGCTGCCATACCTACTGCCACAGGCCCAAGATTA
CAACTATTCCTGACGGGGACTGGTTTTGTCCAGCTTGCATCGCTAAGGCAAGCGGTCAGAGTAT
AAAAATTAAAAAAATTCATATCAAAGGAAAAAAGACAAATGAATCCAAGAAAAGCAAGAAAGGA
AACGTCGCTGGGGACACTGAAGACGAAGACTCCACTTCCACAAGCAGTTCACTCAAACGAGGAA
GCAAAGATCTCAAAAAGAGGAAAATGGAGGAAAACACTTCCCTCCACTTGTCAAAAGCAGAAAG
TGCTACTTCCGTTAAGAAACCGAAAAAAGAAGAGTGCAAGGACCTGGCTCTCTGCAGCATGATC
CTGACTGAAATGGAAACGCATGAGGACGCCTGGCCCTTTCTGCTTCCGGTCAACCTGAAGCTCG
TACCCGGCTACAGGAAGGTTATTAAGAAGCCTATGGATTTTTCTACAATTAGAGAAAAACTAAA
TAATGGACAGTATCCCAACTTTGAGACCTTTGCTCTAGACGTCAGGCTTGTTTTTGACAACTGT
GAAACATTTAATGAAGATGACTCGGACATAGGCAGAGCTGGCCACAGTATGCGAAAATACTTTG
AAAAAAAGTGGACAGATACCTTCAAAGTGAGCTGAAGTTATAATCTTCTTTTTCTCTTTTTTTC
CTTTTGAACAAGGACAAACAAGACCAGC

hide sequence

RefSeq Acc Id:

XM_039105324 ⟹ XP_038961252

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI
mRatBN7.2	3	44,384,282 - 44,592,867 (-)	NCBI

RefSeq Acc Id:

XM_063283999 ⟹ XP_063140069

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284000 ⟹ XP_063140070

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,568 (-)	NCBI

RefSeq Acc Id:

XM_063284001 ⟹ XP_063140071

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 64,919,532 (-)	NCBI

RefSeq Acc Id:

XM_063284002 ⟹ XP_063140072

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,555 (-)	NCBI

RefSeq Acc Id:

XM_063284003 ⟹ XP_063140073

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 64,919,532 (-)	NCBI

RefSeq Acc Id:

XM_063284004 ⟹ XP_063140074

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284005 ⟹ XP_063140075

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284006 ⟹ XP_063140076

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,568 (-)	NCBI

RefSeq Acc Id:

XM_063284007 ⟹ XP_063140077

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 64,919,532 (-)	NCBI

RefSeq Acc Id:

XM_063284008 ⟹ XP_063140078

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284009 ⟹ XP_063140079

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284010 ⟹ XP_063140080

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,568 (-)	NCBI

RefSeq Acc Id:

XM_063284011 ⟹ XP_063140081

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284012 ⟹ XP_063140082

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284013 ⟹ XP_063140083

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284014 ⟹ XP_063140084

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284015 ⟹ XP_063140085

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284016 ⟹ XP_063140086

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284017 ⟹ XP_063140087

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284018 ⟹ XP_063140088

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284019 ⟹ XP_063140089

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,568 (-)	NCBI

RefSeq Acc Id:

XM_063284020 ⟹ XP_063140090

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 64,919,532 (-)	NCBI

RefSeq Acc Id:

XM_063284021 ⟹ XP_063140091

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,555 (-)	NCBI

RefSeq Acc Id:

XM_063284022 ⟹ XP_063140092

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284023 ⟹ XP_063140093

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,568 (-)	NCBI

RefSeq Acc Id:

XM_063284024 ⟹ XP_063140094

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284025 ⟹ XP_063140095

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,568 (-)	NCBI

RefSeq Acc Id:

XM_063284026 ⟹ XP_063140096

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,568 (-)	NCBI

RefSeq Acc Id:

XM_063284027 ⟹ XP_063140097

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 64,919,532 (-)	NCBI

RefSeq Acc Id:

XM_063284028 ⟹ XP_063140098

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284029 ⟹ XP_063140099

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,568 (-)	NCBI

RefSeq Acc Id:

XM_063284030 ⟹ XP_063140100

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284031 ⟹ XP_063140101

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284032 ⟹ XP_063140102

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284033 ⟹ XP_063140103

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284034 ⟹ XP_063140104

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,568 (-)	NCBI

RefSeq Acc Id:

XM_063284035 ⟹ XP_063140105

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 64,919,532 (-)	NCBI

RefSeq Acc Id:

XM_063284036 ⟹ XP_063140106

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284037 ⟹ XP_063140107

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,568 (-)	NCBI

RefSeq Acc Id:

XM_063284038 ⟹ XP_063140108

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284039 ⟹ XP_063140109

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,568 (-)	NCBI

RefSeq Acc Id:

XM_063284040 ⟹ XP_063140110

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284041 ⟹ XP_063140111

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284042 ⟹ XP_063140112

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 64,846,079 (-)	NCBI

RefSeq Acc Id:

XM_063284043 ⟹ XP_063140113

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 64,846,079 (-)	NCBI

RefSeq Acc Id:

XM_063284044 ⟹ XP_063140114

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 64,846,079 (-)	NCBI

RefSeq Acc Id:

XM_063284045 ⟹ XP_063140115

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284046 ⟹ XP_063140116

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

RefSeq Acc Id:

XM_063284047 ⟹ XP_063140117

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	64,792,984 - 65,001,572 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101730	(Get FASTA)	NCBI Sequence Viewer
	XP_038961252	(Get FASTA)	NCBI Sequence Viewer
	XP_063140069	(Get FASTA)	NCBI Sequence Viewer
	XP_063140070	(Get FASTA)	NCBI Sequence Viewer
	XP_063140071	(Get FASTA)	NCBI Sequence Viewer
	XP_063140072	(Get FASTA)	NCBI Sequence Viewer
	XP_063140073	(Get FASTA)	NCBI Sequence Viewer
	XP_063140074	(Get FASTA)	NCBI Sequence Viewer
	XP_063140075	(Get FASTA)	NCBI Sequence Viewer
	XP_063140076	(Get FASTA)	NCBI Sequence Viewer
	XP_063140077	(Get FASTA)	NCBI Sequence Viewer
	XP_063140078	(Get FASTA)	NCBI Sequence Viewer
	XP_063140079	(Get FASTA)	NCBI Sequence Viewer
	XP_063140080	(Get FASTA)	NCBI Sequence Viewer
	XP_063140081	(Get FASTA)	NCBI Sequence Viewer
	XP_063140082	(Get FASTA)	NCBI Sequence Viewer
	XP_063140083	(Get FASTA)	NCBI Sequence Viewer
	XP_063140084	(Get FASTA)	NCBI Sequence Viewer
	XP_063140085	(Get FASTA)	NCBI Sequence Viewer
	XP_063140086	(Get FASTA)	NCBI Sequence Viewer
	XP_063140087	(Get FASTA)	NCBI Sequence Viewer
	XP_063140088	(Get FASTA)	NCBI Sequence Viewer
	XP_063140089	(Get FASTA)	NCBI Sequence Viewer
	XP_063140090	(Get FASTA)	NCBI Sequence Viewer
	XP_063140091	(Get FASTA)	NCBI Sequence Viewer
	XP_063140092	(Get FASTA)	NCBI Sequence Viewer
	XP_063140093	(Get FASTA)	NCBI Sequence Viewer
	XP_063140094	(Get FASTA)	NCBI Sequence Viewer
	XP_063140095	(Get FASTA)	NCBI Sequence Viewer
	XP_063140096	(Get FASTA)	NCBI Sequence Viewer
	XP_063140097	(Get FASTA)	NCBI Sequence Viewer
	XP_063140098	(Get FASTA)	NCBI Sequence Viewer
	XP_063140099	(Get FASTA)	NCBI Sequence Viewer
	XP_063140100	(Get FASTA)	NCBI Sequence Viewer
	XP_063140101	(Get FASTA)	NCBI Sequence Viewer
	XP_063140102	(Get FASTA)	NCBI Sequence Viewer
	XP_063140103	(Get FASTA)	NCBI Sequence Viewer
	XP_063140104	(Get FASTA)	NCBI Sequence Viewer
	XP_063140105	(Get FASTA)	NCBI Sequence Viewer
	XP_063140106	(Get FASTA)	NCBI Sequence Viewer
	XP_063140107	(Get FASTA)	NCBI Sequence Viewer
	XP_063140108	(Get FASTA)	NCBI Sequence Viewer
	XP_063140109	(Get FASTA)	NCBI Sequence Viewer
	XP_063140110	(Get FASTA)	NCBI Sequence Viewer
	XP_063140111	(Get FASTA)	NCBI Sequence Viewer
	XP_063140112	(Get FASTA)	NCBI Sequence Viewer
	XP_063140113	(Get FASTA)	NCBI Sequence Viewer
	XP_063140114	(Get FASTA)	NCBI Sequence Viewer
	XP_063140115	(Get FASTA)	NCBI Sequence Viewer
	XP_063140116	(Get FASTA)	NCBI Sequence Viewer
	XP_063140117	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI58853	(Get FASTA)	NCBI Sequence Viewer
	EDM00389	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000071727
	ENSRNOP00000071727.2
	ENSRNOP00000087832
	ENSRNOP00000087832.3
	ENSRNOP00000098362
	ENSRNOP00000098362.2
	ENSRNOP00000098363
	ENSRNOP00000098363.2
	ENSRNOP00000098364
	ENSRNOP00000098364.2
	ENSRNOP00000098366
	ENSRNOP00000098366.2

RefSeq Acc Id:

NP_001101730 ⟸ NM_001108260

- UniProtKB:

A0A0G2K175 (UniProtKB/TrEMBL), A6JF71 (UniProtKB/TrEMBL), A0A0G2K535 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MESGERLPSSPAPSTTPTSSAPSVASAVSKSSLPTGAASLGSAASPCVLEAGKSKIKVSPDSVS
GHLFRAAGDQPFNLSTVPSAFPMVSHPVFGLHSASSGHSEFGGLGTLGTPTALAVHPQLTSFPG
AEWWRTTDGHSRAGTPFFPPLLGIPPLFAPPAQNHDSSFHSRTSGKSNRNGPEKGINGSVNGNS
AASVHGVNTSGLSTPASSSMGQNQSTSSGGGNLKCHQEQNKSQPVDARADKIKDKKPRKKAMES
SSNSDSDSGTSSDTSSEGISSSDSDDLEEEEEEDQSIEESEDDDSDSETEAQHKSNNQVLLHGI
SDPKTDGQKASEKAQERRTHQPLPPVSEPQTHPSFQSQQKQPQVLSQQLPFIFQSSQAKEESVT
KHTSVIQSTGLVSNVKPLSLVNQAKKEPYRKLVVPSPDVLKAGNKNTSEESSSLTSELRSKREQ
YKQTFPSQVKKQESGRSLKKVIAALSSTKATSSPPAHPKLPLDNNHPNPFLTNALLGNHQPNGV
IQSVIQEAPLALTTKTKMQSKINENVSTSTPFSSPVNLSTGGRRTPGSQAPALPSASPILHSSG
KEKRVSTDAAPLKGHHHPHPATSLVEQFRGTDSDIPSSKDSEDSNEDEEEDEEEEDEEDDEDDE
SDDSQSESDSNSESDSEGSEDDDEKDQEESDSDTEGAKPAVNLTQTSSSAKSPPSSLTAHSAPH
NLHIGGPPGSAPAALCSESQPPAFLGTSSSTLTSSPHSGTSKRRRVADDHELRIPLDYGWQRET
RVRNFGGRLPGEVTYYAPCGKKLRQYPDMIKGMQWCLLKEEDVIPRIRAMDGRRGRPPNPDRPR
AREESRMKRRKGRPPNVGSAEFLDNTDAKLLRKLQAQEIARQAAQIKLLRKLQKQEQARVAKEA
KKQQAIMAAEEKRKQKEQMKMLKQQEKIKRIQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA
EKRTKEKELRRQQAVLLKHQELERHRLDMERERRRQHMMLMKAMEARKKAEEKERLKQEKRDEK
RLNKERKLEQRRLELEMAKELKKPKEDMCLADQKPLPEWPRIPGLVLSGTTFSDCLMVVQFLRN
FGKVLGFDVNIDVPNLSVLQEGLLNIGDSMGEVQDLLVRLLSAAVCDPGLITGYKAKTALGEHL
LNVGVNRDNVSEVLQIFMEAHCGQTELTESLKTKAFQAHTPAQKASILAFLVNELACSKSVVSE
IDKNIEYMSNLRRDKWVVEGKLRKLRIIHAKKTGKRDASGGIDLGEEQHPLGTPTPGRKRRRKG
GDSDYDDDDDDDSDDQADEDEEDDEDKDDKKGKKTDICEDEDEGDQTASVEELEKQIEKLSKQQ
SQYRRKLFDASHSLRSMMFGQDRYRRRYWILPQCGGIFVEGMESGEGLEEIAKEKEKLKKAESL
QIKEEVFETSTDTLNCPTRDHCEQKDDLKEKDNTNLFLQKPGSFSKLSKLLEVAKMPPESDVMT
PPKVNVSTNGGPLSHQNSGKHALGSIPSAAAQSPVGKTDVSLFSSGSGSCGKFYSPLPNDQLLK
TLTEKNRQWFSLLPKTPCDDTSLTHADLSASSVTPQSQPPSKSPSPAPAPLLASSSVQNPAGLN
PFALSPLQVKSGVSMMGLQFCGWPAGVLTSSVPFTSPLPGLGSGLGLPEGNGSSSFLNSSVASS
KSESPIPPAEKASTATPAAVEVAKPVDFPIPKPIPEEMQLGWWRIMDPEDLRTLLKVLHLRGLR
EKALQKQVQKHLDYITHACAKNKDVAIIELNENEENQVTRDLVENWSVEEQAMELDLSILQQVE
DLERRVASASLQVKGWMCPEPASEREDLVYFEHKSFTKLSKEHDGELTGDEENSAHALARKSDN
PLDIAVTRLADLERNIERRYLKSPLSTTIQIKLDNVGTVTVPAPAPSISGDGDGVEEDIAPGLR
VWRRALAEARSAAQVALCIQQLQRSIAWEKSIMKVYCQICRKGDNEELLLLCDGCDKGCHTYCH
RPKITTIPDGDWFCPACIAKASGQSIKIKKIHIKGKKTNESKKSKKGNVAGDTEDEDSTSTSSS
LKRGSKDLKKRKMEENTSLHLSKAESATSVKKPKKEECKDLALCSMILTEMETHEDAWPFLLPV
NLKLVPGYRKVIKKPMDFSTIREKLNNGQYPNFETFALDVRLVFDNCETFNEDDSDIGRAGHSM
RKYFEKKWTDTFKVS

hide sequence

Ensembl Acc Id:

ENSRNOP00000071727 ⟸ ENSRNOT00000081302

Ensembl Acc Id:

ENSRNOP00000073275 ⟸ ENSRNOT00000085885

RefSeq Acc Id:	XP_038961252 ⟸ XM_039105324
- Peptide Label:	isoform X17
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000091778 ⟸ ENSRNOT00000102229

Ensembl Acc Id:

ENSRNOP00000087832 ⟸ ENSRNOT00000110670

RefSeq Acc Id:	XP_063140111 ⟸ XM_063284041
- Peptide Label:	isoform X26
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140094 ⟸ XM_063284024
- Peptide Label:	isoform X15
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140116 ⟸ XM_063284046
- Peptide Label:	isoform X31
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140081 ⟸ XM_063284011
- Peptide Label:	isoform X6
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140115 ⟸ XM_063284045
- Peptide Label:	isoform X30
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140079 ⟸ XM_063284009
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140110 ⟸ XM_063284040
- Peptide Label:	isoform X25
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140108 ⟸ XM_063284038
- Peptide Label:	isoform X24
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140092 ⟸ XM_063284022
- Peptide Label:	isoform X14
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140106 ⟸ XM_063284036
- Peptide Label:	isoform X23
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140103 ⟸ XM_063284033
- Peptide Label:	isoform X22
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140088 ⟸ XM_063284018
- Peptide Label:	isoform X13
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140100 ⟸ XM_063284030
- Peptide Label:	isoform X19
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140117 ⟸ XM_063284047
- Peptide Label:	isoform X32
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140075 ⟸ XM_063284005
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140101 ⟸ XM_063284031
- Peptide Label:	isoform X20
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140098 ⟸ XM_063284028
- Peptide Label:	isoform X18
- UniProtKB:	A0A8I6A6K9 (UniProtKB/TrEMBL), A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140084 ⟸ XM_063284014
- Peptide Label:	isoform X9
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140083 ⟸ XM_063284013
- Peptide Label:	isoform X8
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140082 ⟸ XM_063284012
- Peptide Label:	isoform X7
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140087 ⟸ XM_063284017
- Peptide Label:	isoform X12
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140078 ⟸ XM_063284008
- Peptide Label:	isoform X4
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140086 ⟸ XM_063284016
- Peptide Label:	isoform X11
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140074 ⟸ XM_063284004
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K175 (UniProtKB/TrEMBL), A6JF71 (UniProtKB/TrEMBL), A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140102 ⟸ XM_063284032
- Peptide Label:	isoform X21
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140085 ⟸ XM_063284015
- Peptide Label:	isoform X10
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140069 ⟸ XM_063283999
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140095 ⟸ XM_063284025
- Peptide Label:	isoform X16
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140080 ⟸ XM_063284010
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140109 ⟸ XM_063284039
- Peptide Label:	isoform X24
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140093 ⟸ XM_063284023
- Peptide Label:	isoform X14
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140107 ⟸ XM_063284037
- Peptide Label:	isoform X23
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140104 ⟸ XM_063284034
- Peptide Label:	isoform X22
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140089 ⟸ XM_063284019
- Peptide Label:	isoform X13
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140099 ⟸ XM_063284029
- Peptide Label:	isoform X19
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140076 ⟸ XM_063284006
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140096 ⟸ XM_063284026
- Peptide Label:	isoform X17
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140070 ⟸ XM_063284000
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140091 ⟸ XM_063284021
- Peptide Label:	isoform X13
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140072 ⟸ XM_063284002
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140090 ⟸ XM_063284020
- Peptide Label:	isoform X13
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140071 ⟸ XM_063284001
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140105 ⟸ XM_063284035
- Peptide Label:	isoform X22
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140077 ⟸ XM_063284007
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140097 ⟸ XM_063284027
- Peptide Label:	isoform X17
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140073 ⟸ XM_063284003
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K535 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140114 ⟸ XM_063284044
- Peptide Label:	isoform X29

RefSeq Acc Id:	XP_063140113 ⟸ XM_063284043
- Peptide Label:	isoform X28

RefSeq Acc Id:	XP_063140112 ⟸ XM_063284042
- Peptide Label:	isoform X27

Ensembl Acc Id:

ENSRNOP00000098364 ⟸ ENSRNOT00000120739

Ensembl Acc Id:

ENSRNOP00000098362 ⟸ ENSRNOT00000120737

Ensembl Acc Id:

ENSRNOP00000098366 ⟸ ENSRNOT00000120741

Ensembl Acc Id:

ENSRNOP00000098363 ⟸ ENSRNOT00000120738

Protein Domains

Bromo DDT MBD PHD-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K175-F1-model_v2	AlphaFold	A0A0G2K175	1-2129	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309801	AgrOrtholog
BioCyc Gene	G2FUF-49633	BioCyc
Ensembl Genes	ENSRNOG00000056984	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000081302	ENTREZGENE
	ENSRNOT00000081302.4	UniProtKB/TrEMBL
	ENSRNOT00000110670	ENTREZGENE
	ENSRNOT00000110670.3	UniProtKB/TrEMBL
	ENSRNOT00000120737	ENTREZGENE
	ENSRNOT00000120737.2	UniProtKB/TrEMBL
	ENSRNOT00000120738	ENTREZGENE
	ENSRNOT00000120738.2	UniProtKB/TrEMBL
	ENSRNOT00000120739	ENTREZGENE
	ENSRNOT00000120739.2	UniProtKB/TrEMBL
	ENSRNOT00000120741	ENTREZGENE
	ENSRNOT00000120741.2	UniProtKB/TrEMBL
Gene3D-CATH	1.20.920.10	UniProtKB/TrEMBL
	3.30.40.10	UniProtKB/TrEMBL
	Methyl-cpg-binding Protein 2, Chain A	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7453728	IMAGE-MGC_LOAD
InterPro	BAZ2A/B_Bromo	UniProtKB/TrEMBL
	Bromodomain	UniProtKB/TrEMBL
	Bromodomain-like_sf	UniProtKB/TrEMBL
	Bromodomain_CS	UniProtKB/TrEMBL
	DDT_dom_superfamily	UniProtKB/TrEMBL
	DNA-bd_integrase-typ	UniProtKB/TrEMBL
	Methyl_CpG_DNA-bd	UniProtKB/TrEMBL
	WHIM1_dom	UniProtKB/TrEMBL
	WHIM2_dom	UniProtKB/TrEMBL
	Znf_FYVE_PHD	UniProtKB/TrEMBL
	Znf_PHD	UniProtKB/TrEMBL
	Znf_PHD-finger	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
KEGG Report	rno:317627	UniProtKB/TrEMBL
MGC_CLONE	MGC:188343	IMAGE-MGC_LOAD
NCBI Gene	317627	ENTREZGENE
PANTHER	BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 2B	UniProtKB/TrEMBL
	TOUTATIS, ISOFORM E	UniProtKB/TrEMBL
	TRANSCRIPTION INTERMEDIARY FACTOR	UniProtKB/TrEMBL
Pfam	Bromodomain	UniProtKB/TrEMBL
	DDT	UniProtKB/TrEMBL
	MBD	UniProtKB/TrEMBL
	PHD	UniProtKB/TrEMBL
	WHIM1	UniProtKB/TrEMBL
	WSD	UniProtKB/TrEMBL
PhenoGen	Baz2b	PhenoGen
PRINTS	BROMODOMAIN	UniProtKB/TrEMBL
PROSITE	BROMODOMAIN_1	UniProtKB/TrEMBL
	BROMODOMAIN_2	UniProtKB/TrEMBL
	DDT	UniProtKB/TrEMBL
	MBD	UniProtKB/TrEMBL
	ZF_PHD_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000056984	RatGTEx
SMART	BROMO	UniProtKB/TrEMBL
	DDT	UniProtKB/TrEMBL
	MBD	UniProtKB/TrEMBL
	PHD	UniProtKB/TrEMBL
Superfamily-SCOP	Bromodomain	UniProtKB/TrEMBL
	DNA-binding_integrase-type	UniProtKB/TrEMBL
	FYVE_PHD_ZnF	UniProtKB/TrEMBL
UniProt	A0A0G2K175	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2K535	ENTREZGENE
	A0A8I6A6K9	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0KW30_RAT	UniProtKB/TrEMBL
	A0ABK0L3J0_RAT	UniProtKB/TrEMBL
	A0ABK0L7Y4_RAT	UniProtKB/TrEMBL
	A0ABK0LB06_RAT	UniProtKB/TrEMBL
	A6JF71	ENTREZGENE, UniProtKB/TrEMBL
	B0BNJ7_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Baz2b	bromodomain adjacent to zinc finger domain, 2B	Baz2b_predicted	bromodomain adjacent to zinc finger domain, 2B (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Baz2b_predicted	bromodomain adjacent to zinc finger domain, 2B (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar