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Gene: Hectd4 (HECT domain E3 ubiquitin protein ligase 4) Rattus norvegicus

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Symbol:

Hectd4

Name:

HECT domain E3 ubiquitin protein ligase 4

RGD ID:

1309762

Description:

Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in glucose homeostasis and glucose metabolic process. Orthologous to human HECTD4 (HECT domain E3 ubiquitin protein ligase 4); INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

HECT domain containing E3 ubiquitin protein ligase 4; LOC304503; probable E3 ubiquitin-protein ligase HECTD4; RGD1309762; similar to KIAA0614 protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	40,800,232 - 40,991,584 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	12	40,843,770 - 40,991,798 (-)	Ensembl				GRCr8
mRatBN7.2	12	35,182,165 - 35,330,935 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	35,182,154 - 35,330,987 (-)	Ensembl				mRatBN7.2
Rnor_6.0	12	40,712,078 - 40,860,930 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	40,713,841 - 40,822,159 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	12	42,579,193 - 42,728,149 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	12	36,318,373 - 36,423,169 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	12	36,847,681 - 36,995,299 (-)	NCBI		Celera
RGSC_v3.1	12	36,183,146 - 36,299,948 (-)	NCBI
Cytogenetic Map	12	q16	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

alcohol-induced mental disorder (ISO)

autism spectrum disorder (ISO)

coronary artery disease (ISO)

NEURODEVELOPMENTAL DISORDER WITH SEIZURES, SPASTICITY, AND COMPLETE OR PARTIAL AGENESIS OF THE CORPUS CALLOSUM (ISO)

type 2 diabetes mellitus (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-demecolcine (ISO)

1-chloro-2,4-dinitrobenzene (ISO)

17alpha-ethynylestradiol (EXP)

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-hydroxypropanoic acid (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (EXP,ISO)

all-trans-retinoic acid (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium dichloride (EXP)

caffeine (ISO)

calcium atom (ISO)

calcium(0) (ISO)

cisplatin (ISO)

clobetasol (ISO)

cobalt dichloride (EXP)

coumarin (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

ethanol (ISO)

ethyl methanesulfonate (ISO)

FR900359 (ISO)

hydrogen peroxide (ISO)

indometacin (ISO)

lead(0) (ISO)

methyl methanesulfonate (ISO)

N-acetyl-L-cysteine (ISO)

oxaliplatin (EXP)

quercetin (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

rotenone (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

topotecan (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

urethane (ISO)

valproic acid (EXP,ISO)

vincristine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

glucose homeostasis (IBA,ISO)

glucose metabolic process (ISO)

Molecular Function

transferase activity (IEA)

ubiquitin-protein transferase activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:23575436	PMID:36527595

Genomics

Comparative Map Data

Hectd4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	40,800,232 - 40,991,584 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	12	40,843,770 - 40,991,798 (-)	Ensembl				GRCr8
mRatBN7.2	12	35,182,165 - 35,330,935 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	35,182,154 - 35,330,987 (-)	Ensembl				mRatBN7.2
Rnor_6.0	12	40,712,078 - 40,860,930 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	40,713,841 - 40,822,159 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	12	42,579,193 - 42,728,149 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	12	36,318,373 - 36,423,169 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	12	36,847,681 - 36,995,299 (-)	NCBI		Celera
RGSC_v3.1	12	36,183,146 - 36,299,948 (-)	NCBI
Cytogenetic Map	12	q16	NCBI

HECTD4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	112,160,195 - 112,382,431 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	112,160,188 - 112,382,439 (-)	Ensembl			hg38	GRCh38
GRCh37	12	112,597,999 - 112,820,235 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	111,082,494 - 111,228,421 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	12	112,223,478 - 112,446,926 (-)	NCBI		Celera
Cytogenetic Map	12	q24.13	NCBI
HuRef	12	109,611,135 - 109,832,758 (-)	NCBI		HuRef
CHM1_1	12	112,566,184 - 112,788,132 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	112,137,101 - 112,359,329 (-)	NCBI		T2T-CHM13v2.0

Hectd4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	121,357,323 - 121,506,633 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	121,358,282 - 121,506,640 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	5	121,219,513 - 121,368,577 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	121,220,219 - 121,368,577 (+)	Ensembl			mm10	GRCm38
MGSCv37	5	121,670,214 - 121,818,586 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	5	121,585,831 - 121,629,192 (+)	NCBI		MGSCv36	mm8
Celera	5	118,310,100 - 118,458,521 (+)	NCBI		Celera
Cytogenetic Map	5	F	NCBI
cM Map	5	61.72	NCBI

Hectd4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955482	8,716,092 - 8,847,979 (-)	Ensembl
ChiLan1.0	NW_004955482	8,714,100 - 8,847,975 (-)	NCBI	ChiLan1.0	ChiLan1.0

HECTD4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	120,250,769 - 120,472,956 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	120,247,162 - 120,469,341 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	109,756,303 - 109,978,510 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	113,150,901 - 113,309,528 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	113,151,017 - 113,311,809 (-)	Ensembl			panPan2	panpan1.1

HECTD4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	26	9,764,437 - 9,954,274 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	26	9,767,169 - 9,954,118 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	26	9,883,238 - 10,071,992 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	26	10,002,501 - 10,193,532 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	26	10,003,319 - 10,193,589 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	26	9,979,339 - 10,168,130 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	26	10,042,607 - 10,231,400 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	26	10,090,235 - 10,279,116 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Hectd4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	147,892,128 - 148,068,653 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936668	2,390,405 - 2,514,708 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936668	2,390,902 - 2,514,653 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HECTD4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	39,326,792 - 39,536,693 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	14	39,326,695 - 39,537,921 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	41,829,770 - 42,040,718 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

HECTD4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	107,403,854 - 107,624,534 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	107,405,887 - 107,596,312 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666037	137,465,425 - 137,688,609 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Hectd4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624747	19,843,720 - 20,029,225 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624747	19,843,434 - 20,031,188 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Hectd4
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	16	32,449,404 - 32,600,070 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Hectd4
1256 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	115
Count of miRNA genes:	96
Interacting mature miRNAs:	107
Transcripts:	ENSRNOT00000001826
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631560	Apr1	Acute phase response QTL 1	6.1		orosomucoid 1 amount (VT:0010541)	plasma orosomucoid 1 level (CMO:0001467)	12	24805022	52308831	Rat
70213	Niddm27	Non-insulin dependent diabetes mellitus QTL 27	3.72		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	11200494	52308831	Rat
8552964	Pigfal17	Plasma insulin-like growth factor 1 level QTL 17	3.5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200494	52308831	Rat
8693635	Alc28	Alcohol consumption QTL 28	2.7	0.439	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	12	28717718	50386405	Rat
7411641	Foco19	Food consumption QTL 19	27.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat
7411643	Foco20	Food consumption QTL 20		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	25989355	52308831	Rat
5684888	Pia42	Pristane induced arthritis QTL 42			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	3489416	48489416	Rat
1300162	Bp188	Blood pressure QTL 188	3.19		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	12	37764145	51558799	Rat
1641928	Alcrsp5	Alcohol response QTL 5			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	12	18473041	52308831	Rat
1549829	Scl48	Serum cholesterol level QTL 48	5		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	12	15264248	52308831	Rat
8552912	Pigfal6	Plasma insulin-like growth factor 1 level QTL 6	5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200497	52308831	Rat
10059594	Kidm46	Kidney mass QTL 46	3.79	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	12	11743528	52308831	Rat
8552918	Pigfal7	Plasma insulin-like growth factor 1 level QTL 7			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200494	52308831	Rat
70169	Eae13	Experimental allergic encephalomyelitis QTL 13		0.032	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	12	29775522	42298555	Rat
1600386	Calcic2	Intracellular calcium level QTL 2		0.001	platelet physiology trait (VT:0005464)	platelet intracellular calcium level (CMO:0000922)	12	33700432	46784661	Rat
1300175	Cm5	Cardiac mass QTL 5	3.78		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	12	33700432	51558799	Rat
1556747	Calcic1	Intracellular calcium level QTL 1		3.6	platelet calcium amount (VT:0010500)	platelet intracellular calcium level (CMO:0000922)	12	33700432	46784661	Rat
631829	Alc6	Alcohol consumption QTL 6	4.7		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	12	34243475	43352593	Rat
61404	Bw120	Body weight QTL 120	5.1		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	12	17464979	46784661	Rat
1331786	Kidm11	Kidney mass QTL 11	3.571		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	12	16187438	52308831	Rat
8693658	Alc33	Alcohol consumption QTL 33	2.1	0.68	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	12	28717718	49212240	Rat
2293699	Bss49	Bone structure and strength QTL 49	5.61	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra trabecular cross-sectional area (CMO:0001692)	12	16135029	52308831	Rat
1331761	Bp218	Blood pressure QTL 218	2.973		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	12	16187438	51213550	Rat
1331763	Wbc2	White blood cell count QTL 2	3.162		leukocyte quantity (VT:0000217)	total white blood cell count (CMO:0000365)	12	11200494	52308831	Rat
7411547	Bw129	Body weight QTL 129		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	6	11200494	52308831	Rat
7387292	Kidm42	Kidney mass QTL 42	3.03	0.0004	kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	12	1	41361854	Rat
2303569	Gluco44	Glucose level QTL 44	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	18473041	52308831	Rat
1298081	Cia25	Collagen induced arthritis QTL 25	4.7		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	2747694	47747694	Rat
2303575	Insul14	Insulin level QTL 14	4		blood insulin amount (VT:0001560)	blood insulin level (CMO:0000349)	12	3087180	48087180	Rat
7411588	Foco6	Food consumption QTL 6		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat
7243862	Mcs30	Mammary carcinoma susceptibility QTL 30	8.62		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	12	5633306	50633306	Rat
2300186	Bmd59	Bone mineral density QTL 59	7.1	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	12	16135029	52308831	Rat
7411597	Foco10	Food consumption QTL 10		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat

Markers in Region

D12Rat52

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	12	40,972,969 - 40,973,114 (+)	Marker Load Pipeline
mRatBN7.2	12	35,312,313 - 35,312,458 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	40,842,405 - 40,842,549	NCBI	Rnor6.0
Rnor_5.0	12	42,709,520 - 42,709,664	UniSTS	Rnor5.0
RGSC_v3.4	12	36,448,697 - 36,448,841	RGD	RGSC3.4
RGSC_v3.4	12	36,448,698 - 36,448,842	UniSTS	RGSC3.4
Celera	12	36,976,786 - 36,976,930	UniSTS
RGSC_v3.1	12	36,312,085 - 36,312,229	RGD
RH 3.4 Map	12	613.1	UniSTS
RH 3.4 Map	12	613.1	RGD
RH 2.0 Map	12	529.4	RGD
SHRSP x BN Map	12	44.35	RGD
Cytogenetic Map	12	q16	UniSTS

D12Got80

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	35,288,242 - 35,288,330 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	40,818,303 - 40,818,390	NCBI	Rnor6.0
Rnor_5.0	12	42,685,418 - 42,685,505	UniSTS	Rnor5.0
RGSC_v3.4	12	36,424,627 - 36,424,714	RGD	RGSC3.4
RGSC_v3.4	12	36,424,628 - 36,424,715	UniSTS	RGSC3.4
Celera	12	36,952,826 - 36,952,913	UniSTS
RGSC_v3.1	12	36,288,015 - 36,288,102	RGD
RH 3.4 Map	12	610.7	UniSTS
RH 3.4 Map	12	610.7	RGD
Cytogenetic Map	12	q16	UniSTS

D12Got214

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	35,225,205 - 35,225,385 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	40,755,113 - 40,755,290	NCBI	Rnor6.0
Rnor_5.0	12	42,622,228 - 42,622,405	UniSTS	Rnor5.0
RGSC_v3.4	12	36,361,416 - 36,361,593	UniSTS	RGSC3.4
Celera	12	36,890,707 - 36,890,884	UniSTS
Cytogenetic Map	12	q16	UniSTS

RH144598

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	35,218,576 - 35,218,726 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	40,748,486 - 40,748,635	NCBI	Rnor6.0
Rnor_5.0	12	42,615,601 - 42,615,750	UniSTS	Rnor5.0
RGSC_v3.4	12	36,354,789 - 36,354,938	UniSTS	RGSC3.4
Celera	12	36,884,080 - 36,884,229	UniSTS
RH 3.4 Map	12	616.8	UniSTS
Cytogenetic Map	12	q16	UniSTS

AW533080

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	35,258,451 - 35,258,631 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	40,788,457 - 40,788,636	NCBI	Rnor6.0
Rnor_5.0	12	42,655,572 - 42,655,751	UniSTS	Rnor5.0
RGSC_v3.4	12	36,394,782 - 36,394,961	UniSTS	RGSC3.4
Celera	12	36,923,865 - 36,924,044	UniSTS
RH 3.4 Map	12	609.7	UniSTS
Cytogenetic Map	12	q16	UniSTS

BI294823

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	35,279,985 - 35,280,174 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	40,810,046 - 40,810,234	NCBI	Rnor6.0
Rnor_5.0	12	42,677,161 - 42,677,349	UniSTS	Rnor5.0
RGSC_v3.4	12	36,416,371 - 36,416,559	UniSTS	RGSC3.4
Celera	12	36,944,569 - 36,944,757	UniSTS
RH 3.4 Map	12	615.0	UniSTS
Cytogenetic Map	12	q16	UniSTS

BF388170

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	35,223,224 - 35,223,407 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	40,753,132 - 40,753,314	NCBI	Rnor6.0
Rnor_5.0	12	42,620,247 - 42,620,429	UniSTS	Rnor5.0
RGSC_v3.4	12	36,359,435 - 36,359,617	UniSTS	RGSC3.4
Celera	12	36,888,726 - 36,888,908	UniSTS
RH 3.4 Map	12	614.4	UniSTS
Cytogenetic Map	12	q16	UniSTS

UniSTS:532167

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	35,249,890 - 35,250,836 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	40,779,896 - 40,780,841	NCBI	Rnor6.0
Rnor_5.0	12	42,647,011 - 42,647,956	UniSTS	Rnor5.0
Celera	12	36,915,307 - 36,916,252	UniSTS
Cytogenetic Map	12	q16	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	92	59	6	356	192	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_001079719	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006221365	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008760521	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008760522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008760527	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008760537	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598533	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089872	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089873	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089874	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089875	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089876	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089877	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089878	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089879	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089880	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089882	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271893	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010056782	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010056783	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAXUCZ010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000001826 ⟹ ENSRNOP00000001826

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	12	35,182,154 - 35,288,875 (-)	Ensembl
Rnor_6.0 Ensembl	12	40,713,841 - 40,822,159 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109636 ⟹ ENSRNOP00000084673

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	40,843,770 - 40,991,798 (-)	Ensembl
mRatBN7.2 Ensembl	12	35,182,154 - 35,330,987 (-)	Ensembl

RefSeq Acc Id:

XM_017598533 ⟹ XP_017454022

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	40,842,809 - 40,991,581 (-)	NCBI
mRatBN7.2	12	35,182,165 - 35,330,933 (-)	NCBI
Rnor_6.0	12	40,712,078 - 40,860,930 (-)	NCBI

Sequence:

show sequence

GGGCCGGGGTCTCCCGGGCCGGGGTTGGCGTGTGGAGGGATGGCGGTGCGGAACGCCTAGGGCG
GAGCCGCGCGGGCGAGGCGGGCGCGGCGGTCGGCCATGGGTTGCTGAAGCGGCAGGGTCTCCGC
AGCGCCTTCTCTTAACCATGGGCTCGTCGGCAGCCGCGGCGGCGGCGGCAGCGGCGGCGGCGGC
GGACTCGGCGCAGNGGCTCTCGGTGAAGGAGGAGACCATCTTTCTGCACGACGGGCTTATCCGG
GTCACCGACCTGGCCGAGCTGCCCAGCGAGATACTCGGCGCCCCGGAGGCCGCCGACACCGACC
TGGAGATTTTAACATTTGAGACCAAAAACCCAACGGAATTAGCAGAACGTTTGCGCTCTGTTTG
TGGGAACCAGAGCAATGCCTATGCCCGCCTGCTGGAATACCGCCTGAACGCCTTGCGTGGACTG
TGGAATGCCCAGCGCCAGCTGGCCCTGGAGGAGCAACACGAAAGGGAAGGCTCAGGTGATGAAG
AGACCTTGGCCCTGCTCAAGCGGCAGGGCTTGCTGCAGCAACCCGAACAAGCGCCCTTCACGTC
CCGGGTGGGCCTCCTGTTGGTCTTCCCCCTCATTCAGTCCCAGAGTAGAACAGACCCTTCCCTC
TGTAACATAACTGCTGAGGTGCTACTAAACTGCCTGCGGGACTGTCAGCCTCTGAGCCTGACCA
AGGAGCCTGCTGACTGTCTCAGTGGGATAGAAACCTTGCTGTGCTCTTGGCTGGAGGAGACCTC
GGACACAGGCCGACACATCCCCCACAAGCAGAAGGAGAATGCTGCTGCTGCCCTGGTGGCGTTG
GCGTGTGCCAGGGGATCCCTGAAGACCTTTGTCCACACAGTTCACCTGCTACAGAGACAGACTG
AGCTGGGCTCCCTGCCTGTCGCCGATGTTTTGTATAGGCTGCTGCTTTTGGAAGGGGGGCCAGG
ATCCCCTTCCTGTTTGCTTGGGGGCAAGCACATAGTATCGTGGGGGTATGAAGACATGCTGCCA
GCACCGGACAGCAACCCTGGCTCCAGCTCTGAAAACAAAGACGCTGATTTGGGCCGCTGTCTCA
CCGCTGATGGGCATTACCTGTACACTACCAACTCCGCTGGGAGAGGACTGAGCAAGCTGGGCTC
TGGACTGCACGGCACGCTCAGAGGGTTTGTTTACTGTCGCAACGAGGAGCTGGAGCCAGGGTGG
GTGGCGTACGGCAGCGGCCACTTGCTCCACCGGCCTGTGTCTTTTGACAATAAACCTCACTCCC
TTTTCCAGGTCATAGACCAGAACACTCTGCAGGTGTGCCAGACAGTGCCCATGCCAGCCAGCCC
CCTTCCTGTGGGCAGCACCATGAGCACTGTGCACCTCTCCTCAGACGGCACTTACTTCTACTGG
ATCTGGTCCCCTGCCAGTTTAAATGAGAAAACCCCAAAGGGACATTCCGTCTTCATGGACATTT
TTGAACTTGTGGTGGAAAATGGGGTATTTGTAGCCAACCCGCTTCAGGAACGCACAATCCTAAT
GAGAAAAGAGGGTGAGTCTGCCAAAAGCATCAATGAGATGCTCCTGAGCAGGCTGTCCCGGTAC
AGAGCCTCTCCGTCGGCGACTCTCGCGGCCCTGACCGGCTCCACCATCTCCAACACGCTGAAGG
AGGATCAAGCAGCAAATACTAGCTGCGGCCTTCCTCTGAAGACGCTGCGGAGGACACCCATGTA
CACCTGCGGCACTTACTTGGTGATGCTGGTCCCACCTCCGGGAGGGTCCGGCAGCTCTGCCACC
CGCTCTCTTTTTGGTGGAACCAGTGGTCTGTCATCTTTAAAAATCCTGGCCTCCAGTTTGGTGT
ATAACATTTCTGATGGCCAGTTTGCAAGTCGTGCAGACCTCATAGATGCTGCTGGAAGCTCGCT
GGGGCGTGGTGCTCTCGTACCAGGATTGGGTGCCTGTTACGATACCGTGAACAACATGCTGTGG
ACCTGCTCAAATGACTACATTGACCAGTGGTGCAATCCTGGCAACCAGGCCTTCCATTACGTGT
GCCAGAGGCTGGGTGTCAGCCATATCATCCCCGAGCCCAAAGAAGAGGCCATTAGCACAAATGA
AGTCATAAACCAGTTACTGCACCATGTTGGCGCCATGTGCATTCACCAGCTCAACCTTCTAGCC
ACGAACCCTAACCTTCCCATCACAAGTGTCCTGGGCAAGCAGCACCCAATCGAGGCACGCCATC
TGAGCAGCATCTGTGACATCATGGAGAAGGCCATGGTTAATGGTGACACCTGCATCGTGCGCTG
CATCCTCGTCGTCTTTCAGGTGGTGTTTAAATTTTTCTTCAGCCCACAAACTGAAAGGAACCGT
GACATCATTCGGCGGTCAGGATTGCTTCTTTGGCAGTTGTTGATGGCACCAAAGGATCAAATCT
GTCCTGAAATTCAGAAGGAGGTCTGTCTTGCTATCAGCTCTGGCTTAAATATTTTATACCCAGG
TGAAACGGAAATCAATAACTTACTTAAGCTGGTCTTAACAGAAGGAGAGAGAAACAGTGGACTC
TCCCAGCTTCGGGATGTGATCCTCACCAACTTAGCAGAGCAGCTTCAGAACAACCGGTTCGGCA
GCGATGAGGACGATCACTACAGACTCAATGACGAGCTCTTACACTACATCCTGAAGATTGTTGT
GCGAGAATCCTGTATCCTCATCACCAAGTGCCAGACAGTCTCCAAGGATGATTTCCAGAAGCTC
CTTTCAACGGTGCCTGCTGCATCCTCCTGCCTGCGCTATCTGATGGCGGTTCAGAATCACCTTC
TCAGTAACACTGTTTTGATTAAGCCTGATGACAATGAGGACAGTGACAGCTCCTTGCAGGGAGA
GACATTGAAGGAGTTAAAGACCAGTATTTTGGCTCTTGCCACCCAGGTCCTGACTGGATGTGAT
GAGGTACTGGAAATGTTGCAGCAGGTCACCACTGCCCTCATCAACAGTGACATGCCTGACCGAG
AGCAGAGGTTAAAAGGCTTGGAGCAAGTTACCAAGGCCACTATGCTTGGTCACCTCCTTCCGGT
GTTGCTGACCTCCCTGATGCACCCCAATCTACAGACCCTGACCATGGCCGACGCCTTGATGCCT
CAGCTCGTGCAACTGGTGCTGTACACCAGCCAGACGGCCTTGCTGCTTAAAACCCAGTGTCCGG
TGTTTGCCGAGGTGGGCTGTTCCCCGTGTGGCACCTCAGACCAGAAGTGCAGGCTTTTCCCTGA
TGAGAGAATGCTAGAAGAAAAGGAAGAGCCAGGCTTTCTCACCGGCTTAAAGATCCCTGCCCCG
TGGGCTGCTGGGAAGACCGTGGAAACAGTACACCCTGTCAGAGACAACTATAAGTTTAAAGAGA
CTGTTCATATCCCAGGAGCTCGCTGCCTCTATCTACGATTTGACACCAGATGCTCGTCACAGTA
CGACTATGACAAATTGGTGATATACGCGGGGCCTAACACAAACAGTAGGAAGGTTGCTGAGTAC
GGAGGCAACACTCTGGGATATGGCAGCCGGAGTGTCTTAGGAACGGGTTGGCCGAAGGACTTGG
TGAAGGTTGAAGGCGATACAGTCACCTTCTCCTTTGAAATGAGAAGTGGCCGTGAACACAACAC
TCCTGACAAAGCTATGTGGGGCTTTGCTTGCACAGTCCGCGCTCAGGAGTCCTCAGAAGATGTC
TCAGGAGGCTTGCCCTTCCTGGTAGACCTGGCCTTAGGTCTGTCTGTGTTAGCTTGTTCCATGT
TAAGAATCCTATACAATGGACCAGAAATTACCAAAGAAGAGGAAGCCTGTCAGGACCTGTTGCG
ATCCAAACTTCTACAAAGGTGCCAATGGCAGGTGGAGGCCAACGGTGTCATCTCCCCTGCCCTT
ACTCCGAGTCCCTCTCCACTGCCGCTGACCATAGAAGAAGACAGAGAATTCACCTACCCCTCGG
ATGTCCTTGTGCCTCCCGTTGGGAACTACTTTGACCTGCCTCGGATCAGGCTGCCTCCAGGAAT
CATGATAAAGCTCAGGGAAATTTCTGGGCGAGCACGACCTCAGTTTAGACCAAGTATAAAAGAG
GTGATCCAGCCCGATGTCATGGAGGAAATGGTGGTGTCATGTGTTATTAAGCACTTGAACTTGG
TTGATGCGCTGCAGTCCCTAATCAATTTCCAGTATCAGGAAGAGCATGCTGAGGAATATGATTT
ATTGTGTAAAATCATGGGAGAGACCTTTAAGAAGCTCAATGCCATGGAGAGACAGCTGCAGAGT
GTGGCTGAGCTGGAACAGAAGTGGCAAAGTGAGGCTGAGGATGCCATGCAGGGGAAGCTGGAGA
ACAACATGCCTTTCTTTTATGACTACCATTTTAATGAGAACAAAATGAAAGAACTAGAGCTTTT
GTGTTCAATGAAGGAAGTCTCCTTCGACGGAAATGATCTTGAAAACATGGTCCTCTCACTGAGG
GAGAAGTTCCTCCAAGAAGTGAATTCTCTTACTCAGAAACCCTCCCACCCGCTGGCCAAAACAA
AGACACTGGTGAAGAGTCTGATGAACCGAGCAGAGCTGCTGCTGCATGTTACCATTGCAGCCCA
GTCGGGCCTCACCAGGAGCATCTCAGGAACACCAGCAGAGACGCCTGCATGCAAATCAGCTTCA
GAAACAAAGGTGGCGTCTCATGCTGTCCGGCAGCCTGTTTTCCTTCGCAGCATGTCTGCTCCTT
CTGACCTGGAAATGATTGGTAATGAAGACTTGGAATTTACTAGAGCCAATCAGAGGCGTCGCCA
TGTGACCAGCCACCGCAGCAGCTCCTTTACACTCTTACAGTCACTGGCCATCGAGGACAGCAGG
GACAAGCCCACTTACAGCGTCCTGCTTGGGCAGCTGTTTGCTTTCATTGGCACCAACCCTGACC
AAGCGGTGTCTAGTAGCAGCTTCCTTTTGGCTGCACAGACAAGATGGCGGCGCGGGAACACTCG
GAAGCAGGCCCTGGTGCATATGCGGGAGTTGCTGACTGCTGCTGTGCGAGTTGGAGGAGTGACA
CACCTGGTAGGGCCAGTGACAATGGTCCTTCAGGGGGGACCCAGAATTGAAGAGCTCACCTGTG
GTGGGATGGTGGAGCAGGTCCAGGAAGCCTTTGGGGAGACCATGACGTCTGTTGTGTCTCTGTG
TGCTCGGTACCCTATTGCTTGTGCGAACAGCATTGGACTCCTGTGTACCATACCTTACACCAGG
AGTGAAGAGAAGTGCCTGGTCCGCAGTGGCCTTGTGCAGCTCATGGACCGACTCTGCAGCTTGA
GCAGTCAGACCGAGTCCAGCTCCAGCGAGAAGCAGACGAAGAAGCAGAAGGTGGCCACCATGGC
CTGGGCTGCCTTCCAAGTGTTGGCTAACCGCTGTGTGGAGTGGGAGAAAGAGGAAGGTGGCTCC
ACAGAGGCTGTGCACTCGGGGCTGGCCCGGCAGGTGTCCAGTCTCCTCACCAATCACCTTGCCC
GAGCTACTGAGTGCTGTGGCAACCAGGCTGCTGGGAACGACGCCCTGCAGGACGTCCTGAGTCT
TCTCAATGACCTTTCCAGGAGCCACATAGGGAAGGCCATCTTGAGCCAGCCAGCCTGCGTTTCT
AAGCTCCTCTCTCTACTGCTGGACCAGCGTCCATCCCCAAAGCTGGTGTTGATCATTCTTCAGT
TATGCCGGGCTGCTCTGCCTTTGATGAGCGTGGAGGACTGTGGGAATGTGGAGCTCCCGCCCTG
GAGCTACTCCGTCCCCTCCCTGAACAGTGAGCAGGAGGACCCCAGTGACCCTGCTTCCAAGATC
GCCTCTCTGCTCTTAGCCAAGCTGGCAGACTATGTGGTCCCAGGATGTCAGACGGTTCTCTCTC
CAACTGCTTCTGAACCTGACACCACACTGACAAAAACCAGTCCTAAGAATTCCTTAAAAGGAGA
TAAAGATCCTGGAGAAGAGAGTGAAGCGGTGGATGGCAAGCTCTCCATATTTATCCACAAGCGG
GAAGACCAGTCCTCCCATGAGGTCCTGCAGCCATTGCTGAGCAGCTCAGAAGGACGGCCCTTTC
GACTTGGTACTGGTGCCAACATGGAAAAAGTTGTGAAGATGGACCGAGACATGACCAAGGGTGG
CTGCTGTGAAGTGATCACAGAAGAGGCCTCAGCCGCCCTCAGGAAAGCAACCAAGTGGGCACAG
TCGGGCCTCATTGTCAGTGTCGGGCCACCAGTGGAATCCATCAACCCAGAGACTGTGAGTGGGC
TGTCCACAGGTGACAAGAAGAAAACGGCCCAAACCTCCATCTGCCGAGAAAGGAACTCGGAACT
GGCCAGAACTGACCCCGTGCGCCCCTTCATCAGTGGGCATGTAGCAAACAGTATGGCCGCAGAA
GTGATCGCCTTGCTTCATAGCCTGCTAATGGCACCAGAATCTAATGCTGCTCAGATATGGACCA
CAACGGCAGAAAAGGTTTTGTCTCGAGCGTTGATGTACATTCCACAACTAGGGAAATATGCAGA
AAGCATCCTGGAAAATGGGAGCAGCAGTGGCAGGAAACTCGCCAAGCTTCAGAGGATTGCACGC
CAGGCTGTTGCCGCCCTCTGTGCACTGGGAGGCTTTAAAGAGACCATCAAGATTGGCTCCGAGG
TCCAGGTTTTAGGTAGAGGAATATCGGGAAGCATTGGAGTTGTGGCTTCTATCAATGAACAGGA
AGGCATAGCTACAGTCAGATTCCCTCCTGTGGACTGCAGAAGGACGTCACAAGCTGCAGACACG
CTGACTATTCCTTTGTCTAGACTCTGTGTTCCACGGTCAGAGGCACTGCCTCTTCATAAGCTGT
CCATTACTGAGAAGGTAGTCCAGGCAGTGCAGTCCATGCTGCTCCCTCAGGAAGGCAGCCTCTC
TATCCACACCTCTCTTCCTGCAACAGGAGATGGCTCGGCACCTGTCATGGCAGTTGTCCGGCTT
CTGGCTGAAATCAGAACCAGAGCCTGCCTGGTCATGGCACAGCTTTTAGAAGACAGCCTGTTTT
GTGAGGAATTCATACAGCAGTGTCCAGCAGCAGTGGAAGTCCTGAATCTCGTAGCCCAGGAGTG
CAGTGCAGGCGAGCGGCTTGCAGTTGTAGAGGTGCAGTGCGAGAGGCTCAGGATGCTCTATCGG
GACTGCGCTCGGCCTCCTCCACCTCCGCTGCAGGCCGACCGGAGACAGCCCAAAGAGATCACCT
GGAGCCCTTCTCGAGTGTTCCCTCCAGTTCGCGCCTGCATGTTTTCATCTCACCTCACCTCTGT
CACCTTCCTGGCTGACCCCAGTGCTGGAGGAGGTCTTCCCCGGGGCACATTCATCTATGCCACC
TCCCCGCTGCCAGTTCAGGCCCCGTCTTTCTACTGGGAAATTGAGATTGTTTCCTATGGAGACA
CTGATGACGACACTGGACCAATCGTCTCATTTGGCTTTGCTACAGAGGCTGAGAAGCGTGATGG
GGCATGGACCAATCCGGTGGGCACTTGCCTCTTCCACAACAATGGCCGAGCTGTGCACTACAAT
GGCTCCAGTCTGCTGCAGTGGAAGAGCGTCCGCTTAGATGTCACACTCTGTCCTGGTGATGTGG
CAGGGATCGGCTGGGAACGGACCGAGGGGACTCCACCTCCTCCAGGGCAGCCAGCCAAAGGTCG
GGTGTACTTCACATACTGCGGGCAGCGCCTCACACCGTACCTAGAAGATGTCTCTGGCGGGATG
TGGCCTGTGGTTCACATTCAGAAGAAGAACACAAAAACTCGAGCCAATTTTGGCTCCCGCCCGT
TTGCGTATGCTGAAGGACAGGCCCACCGTAACGCTGCTGACCTGTGCACTGACCTGGCAGAGGA
GATCAGCGCTAACTTCGAGGCCTTGCCATTCGCCATGGCATCTGACAGTGACAACGATGCTGGC
ACCAGTATTGCGTCAGACCCAGGCACTCATGGGCCACCATGCCGGATTGCAGCAGTGGCCACAG
CCCAGCAGCAATATGACAGTGACACCTCCTGCCATTATAAAGTCGAGCTCAGCTATGAGAATTT
CATCACCTCTGGCCCAGACCCCCACCCACCTCCCATTGCAGATGATGAAAGCGACGATGATGAC
GATGATGACATCCCTCAGGAGGACCACTACGCGCTGCTGGTGAAAGCATGGGAGACCAAGGTTT
TCCCTACCATCCGGAGACGCTTCCGAAATGAAGCTGAGCGGAAGTCGGGCCTGGACCAGATCAA
GGGTGCTTTACAACTAGGCATGGTGGACATCGCCCGGCAGACAGTTGAGTTTCTCTATGAGGAG
AATGGCGGCATCCCCAGAGACCTTTATCTTCCCACCATTGAGGACATTAAAGACGAAGCAAACA
AGTTCACAATTGACAAAGTTCGAAAAGGTCTCACGGTTGTAACCCGCTCTCCAGACAGCAGCAA
TGTAGCTAGCAGTGCTGTGGGAACTGCTTTGCCAAAATTTGCCATCCGAGGGATGCTAAAAACC
TTCGGCCTTCATGGAGTCGTCCTAGATGTTGACTCAGTGAATGAGTTGGTGCAGGTGGAGACAT
ACCTCCGGAGTGAAGGGGTGCTGGTGCGGTACTGGTACCCCATCGACATGCTAGAAAGGCCCCC
TGCGGGCTACCGCAGGACGGCCACTAACGGGCTGGTCACACTGGACAATACCAACCTTCAGATT
CACAGAGAGCTGCTGCGGTGCGAGGCTGCGCTGGCCCGGTTGTACTGTCGCATGGCCCTGCTCA
ACATCTTCGCCCCCAAGCTACCTCACTTATTCACTCGGCTCTTCCACATCCCTGCCATCCGAGA
CATCACCTTAGAGCACCTGCAGCTCCTGTCCAATCAGCTCCTTGCTCCTCCCCTCCCAGATGGC
ACCATCAGCTCCAGCTCCATCCTCCTGGCACAGTCTCTGCAGCACTGCATCCACTCGCAGAGCT
GCTCTGCCACCGACCTCTTCTACCAGGGCAACTCCCAGACGCTGAGGGAGTGGCTCAGCGTGGC
CATCACCCGCACCCTGCACCAGGGCGAGGACAGCCTTCTGGAGCTGACAAAGCAGATCTGCGCC
TTCCTGCAGACAGCACCAGAGCAGTTCCCCTCCGAGGAATTCCCAGTTTCCGAGTCCAAAGTCA
GTATGGATGTGAATTTCCCCGGAGCAGCTTTTGTTGTTGTGTCTTGCAAAGAAAGTCAGTCTGG
ATTCCGCAAAGACTCCTCTCTGTACAAGGCTCCGTGGGCACGTGTGCTCGTCTATGGGCTCGGC
CACAAAGTGAAGCGCACTGGCCAGCTGAACCTCATTGAAGCCGCCTGCTACCCTCGAGACGCCT
CCCCAGCCAACACTGGGCTCGCCCCTCCACCTACAGCTGACCAGTACCCTTCTGTGGTTCTCTC
CACAGACAAAGTCCACATAAAACTAGGAGTGTCCCCACCTCCTGGAGCAGTGCTGGTCTTGCAC
TCTCTGCCCCTGGAGTTCCCTCTGGCGATGGCCTTTGCTGAGCAGCTGCTGTCCTGGAAGTCGG
AGGACAGCGAAGGGAAGTCAGAGGACGAGCCTGACAGCATCCCTACCTCCGTCCTCCTGCACGT
GGTGGAACTGCTAGGAAACTTCCTATGGACTACAGACATGGCGGCCTGTGTGAAGGAGTTGGTC
TTCCACCTCTTGGCTGAGCTCTTGCGTACAGTACATACCCTGGAGCAGCGGAAGCACCCAGCCG
GCCTGTCCTCCTCTATCGCCCTCCAGCTCAATCCCTGCCTGGCCATGCTGATGGCCTTGCAGTC
GGAACTGCACAAGCTGTACGACGAGGAGACCCAGGGCTGGGTCTCGAGCAGCACCTGTGGGGGC
TCCGGAGCAGCAGCCGTGGGCGACCAGGGCAGGTTTTCCACCTACTTCCACGCTCTCATGGAAG
GCTGCCTGGCAGTTGCGGAAGTGACCCTACCTACCAACATCAGTGTCACAGCTAGCGGGGTGAC
CTCAACGACCACTCCAAACCTCAGTGACTCGTCCTCTTCCTCCTCCTCCTCCCCAGGACAGACA
CCACAGAGCCCTAGCCTCCTGTCTAAGAGAAAGAAAGTCAAGATGAAGCGGGAGAAGGCCTCCT
CCTCCAACAAGCGCCAGTCCTCCCGTGCCACGGATGCAGACTCCACTGTGCTTAGCATTGGGGG
TAGCAAGCCTGAGGACATGTTATGGTTCCACCGTGCTCTCACCTTGCTTATCATCCTCCGGCAC
CTTACGAAAAAGGACCCACAGGGCTTGGGTGTCACCAGCGATGCCATTGCTGATGCCTGCCAGG
CCCTGGTCGGCCCCACTGCCCATAGCCGCCTGCTGGTGATCTCTGGCATTCCCACCCACCTGGA
TGAGGCTGTCGTCAGAGGGGCTATCCGCAAGGCCTGCAATGCCCATGGCGGCGTCTTCAAAGAT
GAGATCTACATCCCACTGCAGGACGAGGACCCCAAGAGGCCAAAAGACAAGGCTGAGGGTGGCG
ACAGCAAGGTGGAATCTGAGAAGTTGCTGGGATTCCCCAGTGTGGACAGCCTGGAGGGGAGCAC
ATCAAGCAGCCTGGCCCCTGCCATGAGCATCAGCGCCTCAGCTTCCACCAGCCAGGCCTCAGTC
TGCAGCTCCCAGTGTGTTTCACAGACCGCTAGTGACCTCTCAGTAGACCCCCTGCCCTCAGGCC
TGGAGCTTCCTGTCCCTCCTGTCCTGTTGGAACCCCATGTAGTGTCCAGCCAGGAGAGCCTGGA
CATTTCCTTATGCAGCACTGGCAGCCTGGGCAGCCTGGGCAGCCTGGGGGAGCCTCTAGACAAT
CCAGAGACAGCATCTGTGTCCGACGTGGGCTCCATGTACACGGTCACGTCCCTGGATACTCAGC
CTCTCACAACGCGCCCTATCAAAGGCTTTGCAGTGGTGGAGATAAGGTCCCGAGCCAAAATCGA
GAAAGTCAGAGCAAGTTTATTTAACAATAACGATCTGATCGGCCTGTCCAGTCTGGACGGTGAA
GAGGAGCTGATGGAAATGTCCACAGAGGAGATCCTGACGGTGTCTGTGGTCAATCAGAGTCTGT
TTGACACACAAGGGAGCCCAGGACTAGAAGATTACTTCAATGACAAGTCCATTAAAGGTGAGAA
ACTGGTGCCTGGGGCCAGAGAGGTCCTGACAGAAATATTTAAAAGCTGCGCCCACTCAGAGCAG
ACGCTGAGCCTGACACCAGCCAAACCCATCAGGGTCTCCGACATCTATCTTAGCAAAGAACAGA
TCAACTCCCAGACCCCGGGCAACCTCCTTCACCTCTTCTTCACCAATGTCCGGCCTCCAAAGAA
GGTGCTGGAGGACCAGCTCACACAGATCCTGAGGAAATATGGCGTGCCCAAGCCCAAACTGGAT
AAGAGCAAATACAGCAAAGCCGGGAAGGAGCAGCACCCAGTGAAGGTGGTGAGCACGAAGCGGC
CAGTCACCAAGCCGCCTGCCAAGGACAAAGCTGTGCTCAGCAGCCTCAGCAGGACCGCACTAAG
TGAGAAGAAGCCAACCGTGAAGCCCAAGTCACCTGAGAAGAGCAAACCGGATGAAAAGGATCCA
GAAAAGTCACCCACCAAAAAACAAGAAGTTCCTGAGGAAAAGTACCTAACTCTAGAAGGATTTC
ACAAATTCGTCATTGACCGTGCCAAGCAAGACATCCGCAGTGTCTGGAGGGCAATCCTGTCCTG
TGGGTATGACCTTCATTTTGAGAGGTGTGCCTGCATTGATGTCCGGCACGCACAGAAGGCCTCC
CGGAAGTGGGCTCTGGAGATGGATGTGGCTCTCGTGCAGTACATCAACCGGCTGTGCCGCCACC
TCGCTATCACACCAGCACGGCTCCATCCTCATGAAGTGTACCTTGACCCAGCTGATGCCACTGA
CCCCAGGATGGCCTGCCTTTCCAATGTGCCTATCGAGAGCTTGCGTCTGCGCTTTGCACTGCTC
CAGTCTCTCAACACCACACTGGAGACCTTCTTCCTGCCCCTGGTGGAGCTGCGTCAGACACCCA
TGTACGCACACAGCATCGCCGCCTTGCTGAAGGAGGCAAAAGGGCTGATCTTCTATGACACAAA
AGTGACTGTGATGAACCGGGTGCTAAATGCGACTGTGCAGAGGACAGCTGACCACGCGGCGCCC
GAGATCACCTTAGACCCACTGGAAACTGTGGGAGGGGAAATCAGAGCTTCTGAAAACTCCTACT
TCTGCCAGGCTGCCCGGCAGCTGGCCTCCGTGCCATCTTCTCAGCTCTGTGTCAAGTTGGCCAG
TGGGGGTGACCCCACGTATGCCTTCAATATCCGCTTCACTGGGGAGGAGGTTCATGGCACCAGT
GGCTCCTTCCGCCACTTCCTGTGGCAGGTGTGTAAAGAACTGCAGAGCTCCTCACTGTCGCTGC
TCCTGCTGTGCCCCAGCTCTGCTGTCAACAAGAACAAGGGCAAGTACATCCTGACCCCAAGCCC
CATCACCTATGGGGAGGAGCAACTGCTACACTTCTTGGGCCAGCTGCTGGGAATCGCCATCCGT
GCAGATGTGCCTCTCCCCCTGGACCTGCTGCCCTCCTTCTGGAAGACGCTGGTTGGCGAGCCTC
TTGACCCTGACCAGGACCTGCAGGAGGCAGACATCCTCACCTACAATTATGTCAAGAAGTTTGA
GAGTATCAACGATGAGAGCGAGCTGGAGGCCCTGTGTGCCGAGATCGCCTCCCAGCACCTGGCC
ACTGACAGCCCGGAAGGCCCCAAGCCCTGCTGCCGCTTCACCTACCTGACCATGACTGGCGAGG
AGGTGGAGCTGTGCAGCCGTGGCCGGCACATCCCTGTGGCTTGGGAGAACAAGGATATCTACGC
GGCAGCCATCCGGAGCCTACGCCTGCGTGAGCTACAGAACATGGAGTGCGTGACTGCTGTGCGT
GCTGGCCTGGGCTCCATCATCCCCCTGCAGCTGCTCACCACCCTCAGCCCACTGGAGATGGAAT
TGCGTACCTGTGGCCTCCCGTACGTCAACCTAGAGTTCCTGAAGGCCCACACCATGTACCAGGT
GGGGCTGATGGAGACAGACCAGCACATCGAGCTCTTCTGGGGGGCTCTGGAGACGTTCACCCAG
GAGGAACTGTGCAAGTTCATCAAGTTCGCCTGCAATCAGGAGCGCATCCCCTTCACCTGCCCTT
GCAAGGACGGCGGTCCTGACACAGCCCATGTGCCGCCGTACCCCATGAAGATTGCCCCTCCAGA
TGGCACAGCAGGTCCTCCCGACTCCCGCTACATCCGAGTGGAGACCTGCATGTTCATGATCAAG
CTTCCCCAGTACTCCTCCCTGGAGATCATGCTGGAGAAGCTGCGCTGTGCCATTCACTACCGTG
AAGACCCCCTAAGTGGCTGATGGGAGTGGGCCAGAAGATTAGGCTATCACCAAGGCACCCTTCT
GCCGGCTTGGGAAGCCAGTCCAGGCGCATCCCTCCAGGGCCTCAAGTGAGGAGCTGGCGACATT
TGCATTCTGAACTTTCGTCCGTGTCCCAGGACCACCTGGAAGACACTTTGTATGTGTCCATTTT
GTGAGGGTCCGTTCCTTTGCTGCTGTCTGTGGTACATTTGTAGGATAGTTAATTCCCGACAGTT
TATGTCTAACTTGATCTTCCTGGACACTGTTTTGGTGGCTACCAGACTGCTGTGATGCCACAGG
TTCAGGTGGCTCGTCATCAGAGAGCCACCAGTGGAAAGCTGAGGGTTGAGGTGACCTCAGCCAC
ACAAAGTATCCTGTTCTCTTACAGAGTGTCTCCACAAATGTGTGAGCAGTCCTCAGTCCTGCCC
TCCTGCCCTGAGCTGGCTTCTCCCAGAGGCAGCGTCTGCAGGGCTCCCTCCTTCCGTCTTGAGT
GGTTGAGCTAGTGCTCAAACATTCAAGAGACACGGGGAACTCATGTGTTAACCTTCCTGCTTTA
CTGTGTGTCCCTGCCTTGTTTGTTTGGGGTTTTTTTTGTTTGTTTGTTTTTGTTTTTTTGTTGT
TTTTTTTTTTAGGAAATCCCACAGAGGCCCCTTGTCTCCTCCCATCGAGGCAGCCCTATCTGCC
ACCTGTCTCTTCTGGGCACCTGGGCTGAATGGCCTGAGGATACCTCAGGAGCAGACACCCAGGG
GCTACTCCAGGCCTTAGTTCACAGACAGGTTGGGCACGTCTTGGTGGCTGGAGCTGAAAGACAG
TGGAGCTAGAGGGATAGTGCTGAGTGGGCCTTTCTACAGCTGACTGCACAGGAAAGCACATGAC
TCAAGCCTACCCCACTCTGTGCTCAGAGAGGGCCCACCTCACCACACTGCTGTAAGGAGCCCAG
GAAAGGGTTACAGCCCATCTCTAAAGACTGTCTGAGGTGCTCTGCCCACACAGGGCTGCATCAG
TGACCCAGGCAGAGACTGCAGGGGATTCCTCTGTGCCCTGGCTGGCCTGCCCAGCACCCTCTAC
AACCAACGTGTGTGCCAGGGCTGAGCTTCCTGCAGGCTCACCCACTACCCCAGTGCATTTGTGC
CCCAAATAAGTCTTTGTCCAATGGTACTTTGTTCAAGAGCAGCACATGCCAACTGTTGGACACT
GTCACTTGGGCCTCACCAGTTGTCACAGAATGGCAGCGCTGTAGCTATTGTATGATATTGTGCA
CACAGAAGTTCTAAGGAAAGTGAGGAGGATGTGCTCCTCTCCACAGCACCCGGCCTGCTTGGGA
GGCCGTGCAAGCCTTAGGGCTGGCATCCATCTCCTCCTCGTTACACTTAGGAAACGCATTGAGG
ACCATGACAGAAAACACCCCACCCAACCCCACCCGGGGAAGTGATATGCCCCAGCTCAGTGTGC
TGGCCACGCCAGTCACAGGGCTGCAAGCCCTGCTCTCACAGAAGATCGTGGCCGCTGTGTGGGA
CCACCCCAGCGACCTCAAGGATCCTGACTCTGTTCGACAGAAGGCAGGAGCCTCTGAATTTTAA
AGTGAGTTTTCATTCCTGTACCTTCAGATCCTTGGTTCCCTTCTATCCTTGTCCCACGAATGGA
CTTGGGATTCTGTCAGCTACCTCCCCAGGAGGGTTCTGGAAGCTTCTGTTGGCCCATTCCTTGA
TTAGATGACAGCTGTGAGTGAGATATCTGCTGCTAACTCAGCTGCTGCTCCTAGAGAGCGCACT
GAGGTCCAGACAGATCCCAGTCTTGGCCCTGAACAATGTGTGCTGTAAAGTTACTTGATGTATA
TTTATTATAATTATTTATGACTGCATTAACAGCCCCCATTCAGTCTGATGCTACTTACACTATG
CTGTGTAAAGGAAGCTCACTACGGAAAAAGTCACACCAATAAATAACCTTCATCTGACTGAC

hide sequence

RefSeq Acc Id:

XM_039089872 ⟹ XP_038945800

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	40,842,809 - 40,991,581 (-)	NCBI
mRatBN7.2	12	35,182,165 - 35,330,934 (-)	NCBI

RefSeq Acc Id:

XM_039089873 ⟹ XP_038945801

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	40,842,809 - 40,991,582 (-)	NCBI
mRatBN7.2	12	35,182,165 - 35,330,934 (-)	NCBI

RefSeq Acc Id:

XM_039089874 ⟹ XP_038945802

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	40,842,809 - 40,991,582 (-)	NCBI
mRatBN7.2	12	35,182,165 - 35,330,934 (-)	NCBI

RefSeq Acc Id:

XM_039089875 ⟹ XP_038945803

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	40,842,809 - 40,991,581 (-)	NCBI
mRatBN7.2	12	35,182,165 - 35,330,933 (-)	NCBI

RefSeq Acc Id:

XM_039089876 ⟹ XP_038945804

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	40,842,809 - 40,991,581 (-)	NCBI
mRatBN7.2	12	35,182,165 - 35,330,933 (-)	NCBI

RefSeq Acc Id:

XM_039089877 ⟹ XP_038945805

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	40,842,809 - 40,991,581 (-)	NCBI
mRatBN7.2	12	35,182,165 - 35,330,933 (-)	NCBI

RefSeq Acc Id:

XM_039089878 ⟹ XP_038945806

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	40,842,809 - 40,991,581 (-)	NCBI
mRatBN7.2	12	35,182,165 - 35,330,933 (-)	NCBI

RefSeq Acc Id:

XM_039089879 ⟹ XP_038945807

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	40,842,809 - 40,947,429 (-)	NCBI
mRatBN7.2	12	35,182,165 - 35,286,771 (-)	NCBI

RefSeq Acc Id:

XM_039089880 ⟹ XP_038945808

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	40,842,809 - 40,914,426 (-)	NCBI
mRatBN7.2	12	35,182,165 - 35,253,821 (-)	NCBI

RefSeq Acc Id:

XM_039089882 ⟹ XP_038945810

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	40,842,809 - 40,905,954 (-)	NCBI
mRatBN7.2	12	35,182,165 - 35,245,322 (-)	NCBI

RefSeq Acc Id:

XM_063271893 ⟹ XP_063127963

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	40,842,809 - 40,991,581 (-)	NCBI

RefSeq Acc Id:

XR_010056782

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	40,850,403 - 40,991,584 (-)	NCBI

RefSeq Acc Id:

XR_010056783

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	40,800,232 - 40,991,584 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_017454022	(Get FASTA)	NCBI Sequence Viewer
	XP_038945800	(Get FASTA)	NCBI Sequence Viewer
	XP_038945801	(Get FASTA)	NCBI Sequence Viewer
	XP_038945802	(Get FASTA)	NCBI Sequence Viewer
	XP_038945803	(Get FASTA)	NCBI Sequence Viewer
	XP_038945804	(Get FASTA)	NCBI Sequence Viewer
	XP_038945805	(Get FASTA)	NCBI Sequence Viewer
	XP_038945806	(Get FASTA)	NCBI Sequence Viewer
	XP_038945807	(Get FASTA)	NCBI Sequence Viewer
	XP_038945808	(Get FASTA)	NCBI Sequence Viewer
	XP_038945810	(Get FASTA)	NCBI Sequence Viewer
	XP_063127963	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000084673
	ENSRNOP00000084673.2

RefSeq Acc Id:	XP_017454022 ⟸ XM_017598533
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I5ZZM0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGSSAAAAAAAAAAAADSAQXLSVKEETIFLHDGLIRVTDLAELPSEILGAPEAADTDLEILTF ETKNPTELAERLRSVCGNQSNAYARLLEYRLNALRGLWNAQRQLALEEQHEREGSGDEETLALL KRQGLLQQPEQAPFTSRVGLLLVFPLIQSQSRTDPSLCNITAEVLLNCLRDCQPLSLTKEPADC LSGIETLLCSWLEETSDTGRHIPHKQKENAAAALVALACARGSLKTFVHTVHLLQRQTELGSLP VADVLYRLLLLEGGPGSPSCLLGGKHIVSWGYEDMLPAPDSNPGSSSENKDADLGRCLTADGHY LYTTNSAGRGLSKLGSGLHGTLRGFVYCRNEELEPGWVAYGSGHLLHRPVSFDNKPHSLFQVID QNTLQVCQTVPMPASPLPVGSTMSTVHLSSDGTYFYWIWSPASLNEKTPKGHSVFMDIFELVVE NGVFVANPLQERTILMRKEGESAKSINEMLLSRLSRYRASPSATLAALTGSTISNTLKEDQAAN TSCGLPLKTLRRTPMYTCGTYLVMLVPPPGGSGSSATRSLFGGTSGLSSLKILASSLVYNISDG QFASRADLIDAAGSSLGRGALVPGLGACYDTVNNMLWTCSNDYIDQWCNPGNQAFHYVCQRLGV SHIIPEPKEEAISTNEVINQLLHHVGAMCIHQLNLLATNPNLPITSVLGKQHPIEARHLSSICD IMEKAMVNGDTCIVRCILVVFQVVFKFFFSPQTERNRDIIRRSGLLLWQLLMAPKDQICPEIQK EVCLAISSGLNILYPGETEINNLLKLVLTEGERNSGLSQLRDVILTNLAEQLQNNRFGSDEDDH YRLNDELLHYILKIVVRESCILITKCQTVSKDDFQKLLSTVPAASSCLRYLMAVQNHLLSNTVL IKPDDNEDSDSSLQGETLKELKTSILALATQVLTGCDEVLEMLQQVTTALINSDMPDREQRLKG LEQVTKATMLGHLLPVLLTSLMHPNLQTLTMADALMPQLVQLVLYTSQTALLLKTQCPVFAEVG CSPCGTSDQKCRLFPDERMLEEKEEPGFLTGLKIPAPWAAGKTVETVHPVRDNYKFKETVHIPG ARCLYLRFDTRCSSQYDYDKLVIYAGPNTNSRKVAEYGGNTLGYGSRSVLGTGWPKDLVKVEGD TVTFSFEMRSGREHNTPDKAMWGFACTVRAQESSEDVSGGLPFLVDLALGLSVLACSMLRILYN GPEITKEEEACQDLLRSKLLQRCQWQVEANGVISPALTPSPSPLPLTIEEDREFTYPSDVLVPP VGNYFDLPRIRLPPGIMIKLREISGRARPQFRPSIKEVIQPDVMEEMVVSCVIKHLNLVDALQS LINFQYQEEHAEEYDLLCKIMGETFKKLNAMERQLQSVAELEQKWQSEAEDAMQGKLENNMPFF YDYHFNENKMKELELLCSMKEVSFDGNDLENMVLSLREKFLQEVNSLTQKPSHPLAKTKTLVKS LMNRAELLLHVTIAAQSGLTRSISGTPAETPACKSASETKVASHAVRQPVFLRSMSAPSDLEMI GNEDLEFTRANQRRRHVTSHRSSSFTLLQSLAIEDSRDKPTYSVLLGQLFAFIGTNPDQAVSSS SFLLAAQTRWRRGNTRKQALVHMRELLTAAVRVGGVTHLVGPVTMVLQGGPRIEELTCGGMVEQ VQEAFGETMTSVVSLCARYPIACANSIGLLCTIPYTRSEEKCLVRSGLVQLMDRLCSLSSQTES SSSEKQTKKQKVATMAWAAFQVLANRCVEWEKEEGGSTEAVHSGLARQVSSLLTNHLARATECC GNQAAGNDALQDVLSLLNDLSRSHIGKAILSQPACVSKLLSLLLDQRPSPKLVLIILQLCRAAL PLMSVEDCGNVELPPWSYSVPSLNSEQEDPSDPASKIASLLLAKLADYVVPGCQTVLSPTASEP DTTLTKTSPKNSLKGDKDPGEESEAVDGKLSIFIHKREDQSSHEVLQPLLSSSEGRPFRLGTGA NMEKVVKMDRDMTKGGCCEVITEEASAALRKATKWAQSGLIVSVGPPVESINPETVSGLSTGDK KKTAQTSICRERNSELARTDPVRPFISGHVANSMAAEVIALLHSLLMAPESNAAQIWTTTAEKV LSRALMYIPQLGKYAESILENGSSSGRKLAKLQRIARQAVAALCALGGFKETIKIGSEVQVLGR GISGSIGVVASINEQEGIATVRFPPVDCRRTSQAADTLTIPLSRLCVPRSEALPLHKLSITEKV VQAVQSMLLPQEGSLSIHTSLPATGDGSAPVMAVVRLLAEIRTRACLVMAQLLEDSLFCEEFIQ QCPAAVEVLNLVAQECSAGERLAVVEVQCERLRMLYRDCARPPPPPLQADRRQPKEITWSPSRV FPPVRACMFSSHLTSVTFLADPSAGGGLPRGTFIYATSPLPVQAPSFYWEIEIVSYGDTDDDTG PIVSFGFATEAEKRDGAWTNPVGTCLFHNNGRAVHYNGSSLLQWKSVRLDVTLCPGDVAGIGWE RTEGTPPPPGQPAKGRVYFTYCGQRLTPYLEDVSGGMWPVVHIQKKNTKTRANFGSRPFAYAEG QAHRNAADLCTDLAEEISANFEALPFAMASDSDNDAGTSIASDPGTHGPPCRIAAVATAQQQYD SDTSCHYKVELSYENFITSGPDPHPPPIADDESDDDDDDDIPQEDHYALLVKAWETKVFPTIRR RFRNEAERKSGLDQIKGALQLGMVDIARQTVEFLYEENGGIPRDLYLPTIEDIKDEANKFTIDK VRKGLTVVTRSPDSSNVASSAVGTALPKFAIRGMLKTFGLHGVVLDVDSVNELVQVETYLRSEG VLVRYWYPIDMLERPPAGYRRTATNGLVTLDNTNLQIHRELLRCEAALARLYCRMALLNIFAPK LPHLFTRLFHIPAIRDITLEHLQLLSNQLLAPPLPDGTISSSSILLAQSLQHCIHSQSCSATDL FYQGNSQTLREWLSVAITRTLHQGEDSLLELTKQICAFLQTAPEQFPSEEFPVSESKVSMDVNF PGAAFVVVSCKESQSGFRKDSSLYKAPWARVLVYGLGHKVKRTGQLNLIEAACYPRDASPANTG LAPPPTADQYPSVVLSTDKVHIKLGVSPPPGAVLVLHSLPLEFPLAMAFAEQLLSWKSEDSEGK SEDEPDSIPTSVLLHVVELLGNFLWTTDMAACVKELVFHLLAELLRTVHTLEQRKHPAGLSSSI ALQLNPCLAMLMALQSELHKLYDEETQGWVSSSTCGGSGAAAVGDQGRFSTYFHALMEGCLAVA EVTLPTNISVTASGVTSTTTPNLSDSSSSSSSSPGQTPQSPSLLSKRKKVKMKREKASSSNKRQ SSRATDADSTVLSIGGSKPEDMLWFHRALTLLIILRHLTKKDPQGLGVTSDAIADACQALVGPT AHSRLLVISGIPTHLDEAVVRGAIRKACNAHGGVFKDEIYIPLQDEDPKRPKDKAEGGDSKVES EKLLGFPSVDSLEGSTSSSLAPAMSISASASTSQASVCSSQCVSQTASDLSVDPLPSGLELPVP PVLLEPHVVSSQESLDISLCSTGSLGSLGSLGEPLDNPETASVSDVGSMYTVTSLDTQPLTTRP IKGFAVVEIRSRAKIEKVRASLFNNNDLIGLSSLDGEEELMEMSTEEILTVSVVNQSLFDTQGS PGLEDYFNDKSIKGEKLVPGAREVLTEIFKSCAHSEQTLSLTPAKPIRVSDIYLSKEQINSQTP GNLLHLFFTNVRPPKKVLEDQLTQILRKYGVPKPKLDKSKYSKAGKEQHPVKVVSTKRPVTKPP AKDKAVLSSLSRTALSEKKPTVKPKSPEKSKPDEKDPEKSPTKKQEVPEEKYLTLEGFHKFVID RAKQDIRSVWRAILSCGYDLHFERCACIDVRHAQKASRKWALEMDVALVQYINRLCRHLAITPA RLHPHEVYLDPADATDPRMACLSNVPIESLRLRFALLQSLNTTLETFFLPLVELRQTPMYAHSI AALLKEAKGLIFYDTKVTVMNRVLNATVQRTADHAAPEITLDPLETVGGEIRASENSYFCQAAR QLASVPSSQLCVKLASGGDPTYAFNIRFTGEEVHGTSGSFRHFLWQVCKELQSSSLSLLLLCPS SAVNKNKGKYILTPSPITYGEEQLLHFLGQLLGIAIRADVPLPLDLLPSFWKTLVGEPLDPDQD LQEADILTYNYVKKFESINDESELEALCAEIASQHLATDSPEGPKPCCRFTYLTMTGEEVELCS RGRHIPVAWENKDIYAAAIRSLRLRELQNMECVTAVRAGLGSIIPLQLLTTLSPLEMELRTCGL PYVNLEFLKAHTMYQVGLMETDQHIELFWGALETFTQEELCKFIKFACNQERIPFTCPCKDGGP DTAHVPPYPMKIAPPDGTAGPPDSRYIRVETCMFMIKLPQYSSLEIMLEKLRCAIHYREDPLSG hide sequence

Ensembl Acc Id:

ENSRNOP00000001826 ⟸ ENSRNOT00000001826

RefSeq Acc Id:	XP_038945802 ⟸ XM_039089874
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZZM0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038945801 ⟸ XM_039089873
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZZM0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038945800 ⟸ XM_039089872
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZZM0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038945803 ⟸ XM_039089875
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I5ZZM0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038945806 ⟸ XM_039089878
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I5ZZM0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038945805 ⟸ XM_039089877
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I5ZZM0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038945804 ⟸ XM_039089876
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I5ZZM0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038945807 ⟸ XM_039089879
- Peptide Label:	isoform X10
- UniProtKB:	F1LZX5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038945808 ⟸ XM_039089880
- Peptide Label:	isoform X11
- UniProtKB:	F1LZX5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038945810 ⟸ XM_039089882
- Peptide Label:	isoform X12

Ensembl Acc Id:

ENSRNOP00000084673 ⟸ ENSRNOT00000109636

RefSeq Acc Id:	XP_063127963 ⟸ XM_063271893
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I5ZZM0 (UniProtKB/TrEMBL)

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309762	AgrOrtholog
BioCyc Gene	G2FUF-19204	BioCyc
Ensembl Genes	ENSRNOG00000001352	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000109636	ENTREZGENE
	ENSRNOT00000109636.2	UniProtKB/TrEMBL
Gene3D-CATH	2.60.120.920	UniProtKB/TrEMBL
	Hect, E3 ligase catalytic domain	UniProtKB/TrEMBL
	Hect, E3 ligase catalytic domain	UniProtKB/TrEMBL
	Hect, E3 ligase catalytic domains	UniProtKB/TrEMBL
InterPro	B30.2/SPRY_sf	UniProtKB/TrEMBL
	HECT	UniProtKB/TrEMBL
	Hect_E3_ubiquitin_ligase	UniProtKB/TrEMBL
	HECTD4	UniProtKB/TrEMBL
	SPRY_HECTD4	UniProtKB/TrEMBL
NCBI Gene	304503	ENTREZGENE
PANTHER	E3 UBIQUITIN-PROTEIN LIGASE HECTD4-RELATED	UniProtKB/TrEMBL
	PTHR46435	UniProtKB/TrEMBL
Pfam	HECT	UniProtKB/TrEMBL
PhenoGen	Hectd4	PhenoGen
PROSITE	HECT	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000001352	RatGTEx
SMART	HECTc	UniProtKB/TrEMBL
Superfamily-SCOP	HECT	UniProtKB/TrEMBL
UniProt	A0A8I5ZZM0	ENTREZGENE, UniProtKB/TrEMBL
	F1LZX5	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-03-15	Hectd4	HECT domain E3 ubiquitin protein ligase 4	Hectd4	HECT domain containing E3 ubiquitin protein ligase 4	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2014-07-10	Hectd4	HECT domain containing E3 ubiquitin protein ligase 4	RGD1309762	similar to KIAA0614 protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1309762	similar to KIAA0614 protein	RGD1309762_predicted	similar to KIAA0614 protein (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-20	RGD1309762_predicted	similar to KIAA0614 protein (predicted)	LOC304503_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC304503_predicted	similar to KIAA0614 protein (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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