Abhd16b (abhydrolase domain containing 16B)

Gene: Abhd16b (abhydrolase domain containing 16B) Rattus norvegicus

Analyze

Symbol:

Abhd16b (Ensembl: Tpd52l2)

Name:

abhydrolase domain containing 16B (Ensembl:TPD52 like 2)

RGD ID:

1309726

Description:

Predicted to enable acylglycerol lipase activity and phospholipase activity. Predicted to be involved in monoacylglycerol catabolic process and phosphatidylserine catabolic process. Predicted to be located in nucleoplasm. Orthologous to human ABHD16B (abhydrolase domain containing 16B); INTERACTS WITH bisphenol A; paracetamol; trichloroethene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

abhydrolase domain-containing protein 16B; alpha/beta hydrolase domain-containing protein 16B; hypothetical protein LOC311720; LOC311720; RGD1309726; similar to Hypothetical protein C20orf135

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ABHD16B (abhydrolase domain containing 16B)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Abhd16b (abhydrolase domain containing 16B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Abhd16b (abhydrolase domain containing 16B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ABHD16B (abhydrolase domain containing 16B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ABHD16B (abhydrolase domain containing 16B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Abhd16b (abhydrolase domain containing 16B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ABHD16B (abhydrolase domain containing 16B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ABHD16B (abhydrolase domain containing 16B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Abhd16b (abhydrolase domain containing 16B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ELMOD2 (ELMO domain containing 2)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	ABHD16B (abhydrolase domain containing 16B)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Abhd16b (abhydrolase domain containing 16B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG1309	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	F37A4.1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	188,972,198 - 188,974,095 (+)	NCBI		GRCr8
mRatBN7.2	3	168,594,677 - 168,596,574 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	168,594,609 - 168,619,762 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	172,974,992 - 172,976,889 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	181,934,087 - 181,935,984 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	178,595,602 - 178,597,499 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	176,985,900 - 176,987,797 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	176,985,900 - 176,987,796 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	180,696,183 - 180,698,080 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	170,627,853 - 170,629,750 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	170,533,888 - 170,535,785 (+)	NCBI
Celera	3	163,990,474 - 163,992,371 (-)	NCBI		Celera
Cytogenetic Map	3	q43	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant nocturnal frontal lobe epilepsy (ISO)

benign familial infantile seizures 6 (ISO)

developmental and epileptic encephalopathy (ISO)

developmental and epileptic encephalopathy 33 (ISO)

early infantile epileptic encephalopathy (ISO)

genetic disease (ISO)

neuronal ceroid lipofuscinosis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,3',4,4',5-Pentachlorobiphenyl (ISO)

4,4'-sulfonyldiphenol (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

calcitriol (ISO)

cisplatin (ISO)

dicrotophos (ISO)

methylisothiazolinone (ISO)

paracetamol (EXP,ISO)

permethrin (ISO)

sodium arsenite (ISO)

testosterone (ISO)

trichloroethene (EXP)

triptonide (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

monoacylglycerol catabolic process (IBA)

phosphatidylserine catabolic process (IBA)

Cellular Component

endomembrane system (IEA)

nucleoplasm (IEA,ISO)

Molecular Function

acylglycerol lipase activity (IBA)

phospholipase activity (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
3.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:15489334

Genomics

Comparative Map Data

Abhd16b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	188,972,198 - 188,974,095 (+)	NCBI		GRCr8
mRatBN7.2	3	168,594,677 - 168,596,574 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	168,594,609 - 168,619,762 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	172,974,992 - 172,976,889 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	181,934,087 - 181,935,984 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	178,595,602 - 178,597,499 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	176,985,900 - 176,987,797 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	176,985,900 - 176,987,796 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	180,696,183 - 180,698,080 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	170,627,853 - 170,629,750 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	170,533,888 - 170,535,785 (+)	NCBI
Celera	3	163,990,474 - 163,992,371 (-)	NCBI		Celera
Cytogenetic Map	3	q43	NCBI

ABHD16B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	63,861,498 - 63,862,988 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	63,861,498 - 63,862,988 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	20	62,492,851 - 62,494,341 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	61,963,010 - 61,964,785 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	20	61,963,009 - 61,964,785	NCBI
Celera	20	59,176,749 - 59,178,524 (+)	NCBI		Celera
Cytogenetic Map	20	q13.33	NCBI
HuRef	20	59,225,182 - 59,226,958 (+)	NCBI		HuRef
CHM1_1	20	62,393,380 - 62,395,155 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	20	65,681,341 - 65,682,831 (+)	NCBI		T2T-CHM13v2.0

Abhd16b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	181,134,999 - 181,136,773 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	181,134,999 - 181,136,773 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	181,493,206 - 181,494,980 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	181,493,206 - 181,494,980 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	181,227,911 - 181,229,685 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	181,422,617 - 181,424,384 (+)	NCBI		MGSCv36	mm8
Celera	2	185,574,847 - 185,576,621 (+)	NCBI		Celera
Cytogenetic Map	2	H4	NCBI
cM Map	2	103.63	NCBI

Abhd16b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955528	391,749 - 395,181 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955528	391,749 - 395,181 (-)	NCBI	ChiLan1.0	ChiLan1.0

ABHD16B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	69,669,175 - 69,674,709 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	69,663,001 - 69,664,410 (+)	NCBI		NHGRI_mPanPan1
PanPan1.1	20	61,783,164 - 61,784,933 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	61,783,486 - 61,784,895 (+)	Ensembl	panpan1.1		panPan2

ABHD16B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Dog10K_Boxer_Tasha	24	46,483,287 - 46,484,804 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	48,488,223 - 48,489,742 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	48,488,223 - 48,489,655 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	47,332,979 - 47,334,491 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	47,457,849 - 47,459,357 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	48,196,124 - 48,197,634 (+)	NCBI		UU_Cfam_GSD_1.0

Abhd16b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	195,614,944 - 195,616,808 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936514	11,068,762 - 11,070,162 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936514	11,068,762 - 11,070,162 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ABHD16B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	62,730,062 - 62,731,474 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	17	62,729,995 - 62,732,060 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

ABHD16B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	367,344 - 370,151 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	367,423 - 368,832 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666050	47,907,700 - 47,909,463 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Abhd16b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624741	29,487,951 - 29,490,234 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	42
Count of miRNA genes:	36
Interacting mature miRNAs:	41
Transcripts:	ENSRNOT00000020210
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	43827364	169034231	Rat
631541	Bp81	Blood pressure QTL 81	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	124122556	169034231	Rat
1578656	Vnigr2	Vascular neointimal growth QTL 2	4.2		artery morphology trait (VT:0002191)	lesioned artery residual lumen area (CMO:0001417)	3	130656562	169034231	Rat
1578653	Vnigr3	Vascular neointimal growth QTL 3	3.1		artery morphology trait (VT:0002191)	artery neointimal hyperplastic lesion area (CMO:0001414)	3	130656562	169034231	Rat
9589106	Insul23	Insulin level QTL 23	13.86	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	3	131635904	169034231	Rat
2298477	Eau4	Experimental allergic uveoretinitis QTL 4		0.0011	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	3	137398739	169034231	Rat
8552952	Pigfal13	Plasma insulin-like growth factor 1 level QTL 13			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	3	138799500	169034231	Rat
1298068	Bp167	Blood pressure QTL 167		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	141074471	169034231	Rat
2317883	Alcrsp26	Alcohol response QTL 26	1.8	0.63	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	3	145526770	169034231	Rat
8552791	Vie2	Viral induced encephalitis QTL 2	4.1		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	3	145956084	169034231	Rat
1300161	Rf10	Renal function QTL 10	3.57		renal blood flow trait (VT:2000006)	absolute change in renal vascular resistance (CMO:0001900)	3	161192952	169034231	Rat

Markers in Region

RH142555

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	168,596,177 - 168,596,432 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	176,987,401 - 176,987,655	NCBI	Rnor6.0
Rnor_5.0	3	180,697,684 - 180,697,938	UniSTS	Rnor5.0
RGSC_v3.4	3	170,629,354 - 170,629,608	UniSTS	RGSC3.4
Celera	3	163,990,616 - 163,990,870	UniSTS
RH 3.4 Map	3	1549.6	UniSTS
Cytogenetic Map	3	q43	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium										7
Low		5							1	3	1
Below cutoff	3	13	2	19	2	6	7	10	9	6	10	6

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001014052	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC095847	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC118105	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC083664	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000020210 ⟹ ENSRNOP00000020210

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	168,594,609 - 168,619,762 (+)	Ensembl
Rnor_6.0 Ensembl	3	176,985,900 - 176,987,796 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000100247 ⟹ ENSRNOP00000082032

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	168,594,761 - 168,619,762 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000114404 ⟹ ENSRNOP00000084244

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	168,594,761 - 168,619,762 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000114740 ⟹ ENSRNOP00000080130

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	168,594,761 - 168,619,762 (+)	Ensembl

RefSeq Acc Id:

NM_001014052 ⟹ NP_001014074

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	188,972,198 - 188,974,095 (+)	NCBI
mRatBN7.2	3	168,594,677 - 168,596,574 (+)	NCBI
Rnor_6.0	3	176,985,900 - 176,987,797 (+)	NCBI
Rnor_5.0	3	180,696,183 - 180,698,080 (+)	NCBI
RGSC_v3.4	3	170,627,853 - 170,629,750 (+)	RGD
Celera	3	163,990,474 - 163,992,371 (-)	RGD

Sequence:

show sequence

ATGACTCACAAAACTGAGAGCCATACAGCTTTCCCTTGGCCCTGGAAGACACAGGTCACAAAGG
CCATTGGGGCCTAGTAAAAGGAGGCATGTTATCAGAGTGCCGTGGGTGGCCCTTGCCTCCGCAG
CCACTGGCTGGGCCAGGCCTGCATCTCCTGCTTTCATTCCACAACTAGGACTGGGCCTTCAGGC
CTTGGGGCTAGCAGGGAACAACGCAAAGCTTCAGTGCTCATGTGTGTCATCTGCTTTGTGAAGG
CACTAGTACACGTGTTCAAGATCTACTTGACAGCAAACTACAGTTACAACTTCCGCAGCTGGCC
GGTGGACTTCCGCTGGGATGACCTGCATGTCCCAGGCACTAATAATAGCAGTCACCGTGCATTG
ACCTGTGCTGCAGCTGCCGCAGGTGTGTGGCTGCTACATGATGCGGCGCTGGGCGAGGACGCAC
TCACAAGGCCTCCACGTGGAGCTCGGAGCCAAGTGCAGTGCCTCCTCCAGCAGATCCGTGAGCT
GCCCAGCCAGCTCGCTAGCTATGCACTGGCACACTCACTGGGCCGCTGGCTTGTATACCCGGGT
TCTATGTTCTTGATGACGCGCGCACTATTGCCTCTACTGCAGCAGGGCCAGGAGCGACTAGTGG
ACCGCTACCGTGGGCGGCGTGCCAAGTTGGTGGCCTGCGATGGCAATGAGATTGACACCATGTT
CATGGATCGCCGGCAGCATCCCGGCAGCCATGGCCGCGGCCTGTGCCTGGTTATATGCTGTGAA
GGGAATGCTGGCTTCTACGAGATGGGCTGCCTGTCCGCACCTCTGGAGGCTGGATACTCAGTGC
TAGGCTGGAACCACCCTGGCTTTGGGGGCAGCACAGGTGCACCTTTCCCACAACATGATGCAAA
TGCAATGGATGTGGTGGTCAAATATGCGCTGCACCGCCTGCATTTCTCACCAGCAAATGTGGTG
GTTTATGGCTGGTCTATAGGAGGCTTCACAGCCACTTGGGCCACCATGACTTACCCAGAACTGG
GTGCACTAGTGCTGGATGCCACCTTTGATGATCTTGTGCCACTAGCGCTGAAGGTTATGCCCCA
GAGTTGGAAGGGGCTGGTAGTACGCACTGTACGGGAGCACTTCAACCTCAATGTTGCTGAGCAG
CTGTGCTGCTACCCAGGCCCAGTACTCTTGCTAAGACGTACACAAGATGATGTTGTCAGCACCT
CGGGCCATGTACCCTCGTTGCCATCTTGCCAAGTGGAGGGCGATGTGGAAGGTAACCGTGGCAA
TGAGCTGCTGTTGCGCCTTCTGGAGCACAGATACCCCTCTGTGATGGCCCGTGAGGGCCGCACA
GTGGTAATCCGCTGGCTACGTGCCAGCAACCTGGCTCAAGAAACTGCATTATATGCACGCTACC
ACGTCGATGATGAGTGGTGTTTGGCAACACTTCGTTCTTATCGTGAGGGCCGCCAGAAGGATTT
GGACCATACCAAGACCTGGGGGCCACACGGACCTTCCTTTCCCTGGTTCGTGGGCCAAGGTTTG
AGCGCCCGGCGGCGCCGGCACCTTGCACTGTTCTTGGCACGTAGGCACCTCAAGAACCTGGAGG
CAACTCACTGCAGTCCCTTGGAGCCTGAAGACTTCCAATTGCCCTGGAGACTGTAGCCACAGTT
TATGTGACTCATGCATTTGGGCATTTGTATACTTTCTAGCTCCCCACCCCCACTGTTCCTCTCC
TTACATCTCTACAGAAAAGCTGGCCCTGCTGAGGATCTTGGTGTCTGGGAGTGGGCAGTATATC
TTCCCTTACTTTCTTTCTGTTCCTTCCTGCTTCCATCCTTTCTCTTCCTTGCAAACATCTGAAT
GTCTGTGCCTAATTCTCAAAGGCAATGTAAAGATGAACCTGAAAAAAAAAAAAAAAAAAAAAAA
AAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001014074	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH83664	(Get FASTA)	NCBI Sequence Viewer
	EDL88717	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000020210
	ENSRNOP00000020210.4
	ENSRNOP00000080130.1
	ENSRNOP00000082032.1
	ENSRNOP00000084244.1
	ENSRNOP00055001555
	ENSRNOP00055001557
	ENSRNOP00055001561
	ENSRNOP00055001563
	ENSRNOP00060001157
	ENSRNOP00060001158
	ENSRNOP00060001161
	ENSRNOP00060001165
	ENSRNOP00065017923
	ENSRNOP00065017931
	ENSRNOP00065017936
	ENSRNOP00065017948
GenBank Protein	Q5XIL6	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001014074 ⟸ NM_001014052

- UniProtKB:

Q5XIL6 (UniProtKB/Swiss-Prot), A6KM09 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MCVICFVKALVHVFKIYLTANYSYNFRSWPVDFRWDDLHVPGTNNSSHRALTCAAAAAGVWLLH
DAALGEDALTRPPRGARSQVQCLLQQIRELPSQLASYALAHSLGRWLVYPGSMFLMTRALLPLL
QQGQERLVDRYRGRRAKLVACDGNEIDTMFMDRRQHPGSHGRGLCLVICCEGNAGFYEMGCLSA
PLEAGYSVLGWNHPGFGGSTGAPFPQHDANAMDVVVKYALHRLHFSPANVVVYGWSIGGFTATW
ATMTYPELGALVLDATFDDLVPLALKVMPQSWKGLVVRTVREHFNLNVAEQLCCYPGPVLLLRR
TQDDVVSTSGHVPSLPSCQVEGDVEGNRGNELLLRLLEHRYPSVMAREGRTVVIRWLRASNLAQ
ETALYARYHVDDEWCLATLRSYREGRQKDLDHTKTWGPHGPSFPWFVGQGLSARRRRHLALFLA
RRHLKNLEATHCSPLEPEDFQLPWRL

hide sequence

RefSeq Acc Id:

ENSRNOP00000020210 ⟸ ENSRNOT00000020210

RefSeq Acc Id:

ENSRNOP00000080130 ⟸ ENSRNOT00000114740

RefSeq Acc Id:

ENSRNOP00000082032 ⟸ ENSRNOT00000100247

RefSeq Acc Id:

ENSRNOP00000084244 ⟸ ENSRNOT00000114404

Protein Domains

AB hydrolase-1

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5XIL6-F1-model_v2	AlphaFold	Q5XIL6	1-474	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309726	AgrOrtholog
BioCyc Gene	G2FUF-46282	BioCyc
Ensembl Genes	ENSRNOG00000015067	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOG00055001190	UniProtKB/Swiss-Prot
	ENSRNOG00060001344	UniProtKB/Swiss-Prot
	ENSRNOG00065013953	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000020210	ENTREZGENE
	ENSRNOT00000020210.6	UniProtKB/Swiss-Prot
	ENSRNOT00000100247.1	UniProtKB/Swiss-Prot
	ENSRNOT00000114404.1	UniProtKB/Swiss-Prot
	ENSRNOT00000114740.1	UniProtKB/Swiss-Prot
	ENSRNOT00055001977	UniProtKB/Swiss-Prot
	ENSRNOT00055001979	UniProtKB/Swiss-Prot
	ENSRNOT00055001983	UniProtKB/Swiss-Prot
	ENSRNOT00055001988	UniProtKB/Swiss-Prot
	ENSRNOT00060001952	UniProtKB/Swiss-Prot
	ENSRNOT00060001953	UniProtKB/Swiss-Prot
	ENSRNOT00060001956	UniProtKB/Swiss-Prot
	ENSRNOT00060001960	UniProtKB/Swiss-Prot
	ENSRNOT00065023034	UniProtKB/Swiss-Prot
	ENSRNOT00065023042	UniProtKB/Swiss-Prot
	ENSRNOT00065023047	UniProtKB/Swiss-Prot
	ENSRNOT00065023060	UniProtKB/Swiss-Prot
Gene3D-CATH	3.40.50.1820	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7135476	IMAGE-MGC_LOAD
InterPro	AB_hydrolase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	AB_hydrolase_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:311720	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE	MGC:94505	IMAGE-MGC_LOAD
NCBI Gene	311720	ENTREZGENE
PANTHER	ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PROTEIN ABHD16B	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Abhydrolase_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Abhd16b	PhenoGen
RatGTEx	ENSRNOG00000015067	RatGTEx
	ENSRNOG00055001190	RatGTEx
	ENSRNOG00060001344	RatGTEx
	ENSRNOG00065013953	RatGTEx
Superfamily-SCOP	alpha/beta-Hydrolases	UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
UniProt	A6KM09	ENTREZGENE, UniProtKB/TrEMBL
	ABHGB_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-05-26	Abhd16b	abhydrolase domain containing 16B	RGD1309726	similar to Hypothetical protein C20orf135	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1309726	similar to Hypothetical protein C20orf135	RGD1309726_predicted	similar to Hypothetical protein C20orf135 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1309726_predicted	similar to Hypothetical protein C20orf135 (predicted)	LOC311720_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC311720_predicted	similar to Hypothetical protein C20orf135 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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