Symbol:
Extl1
Name:
exostosin-like glycosyltransferase 1
RGD ID:
1309572
Description:
Predicted to enable glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity and glucuronosyltransferase activity. Predicted to be involved in heparan sulfate proteoglycan biosynthetic process. Predicted to be located in endoplasmic reticulum membrane. Predicted to be active in Golgi apparatus. Orthologous to human EXTL1 (exostosin like glycosyltransferase 1); PARTICIPATES IN heparan sulfate biosynthetic pathway; INTERACTS WITH (+)-schisandrin B; 1-naphthyl isothiocyanate; 17beta-estradiol.
Type:
protein-coding
RefSeq Status:
PROVISIONAL
Previously known as:
exostoses (multiple)-like 1; exostoses-like 1; exostosin-like 1; LOC313610
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
EXTL1 (exostosin like glycosyltransferase 1)
HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):
Extl1 (exostosin-like glycosyltransferase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Extl1 (exostosin like glycosyltransferase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
EXTL1 (exostosin like glycosyltransferase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
EXTL1 (exostosin like glycosyltransferase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Extl1 (exostosin like glycosyltransferase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
EXTL1 (exostosin like glycosyltransferase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
EXTL1 (exostosin like glycosyltransferase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Extl1 (exostosin like glycosyltransferase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Homo sapiens (human):
EXTL1 (exostosin like glycosyltransferase 1)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Extl1 (exostosin-like glycosyltransferase 1)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
ext1c (exostoses (multiple) 1c)
Alliance
DIOPT (Ensembl Compara|OrthoFinder|PANTHER|PhylomeDB)
Caenorhabditis elegans (roundworm):
rib-1
Alliance
DIOPT (Ensembl Compara|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Drosophila melanogaster (fruit fly):
ttv
Alliance
DIOPT (Ensembl Compara|Hieranoid|PANTHER)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 5 151,857,629 - 151,872,830 (-) NCBI GRCr8 mRatBN7.2 5 146,573,911 - 146,589,115 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 5 146,573,912 - 146,589,115 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 5 149,275,765 - 149,290,999 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 5 151,046,051 - 151,061,260 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 5 151,031,993 - 151,047,229 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 5 152,573,755 - 152,588,956 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 5 152,573,758 - 152,589,719 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 5 156,370,680 - 156,385,881 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 5 153,100,524 - 153,115,725 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 5 153,111,846 - 153,125,700 (-) NCBI Celera 5 144,991,344 - 145,006,533 (-) NCBI Celera Cytogenetic Map 5 q36 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Imported Annotations - KEGG (archival)
(+)-schisandrin B (EXP) 1,2-dichloroethane (ISO) 1-naphthyl isothiocyanate (EXP) 17beta-estradiol (EXP,ISO) 2,3,7,8-tetrachlorodibenzodioxine (ISO) 2,4-dinitrotoluene (EXP) 3,4-methylenedioxymethamphetamine (ISO) 4,4'-diaminodiphenylmethane (EXP) 4,4'-sulfonyldiphenol (ISO) 6-propyl-2-thiouracil (EXP) acetamide (EXP) acrylamide (EXP) aflatoxin B1 (ISO) amitrole (EXP) arsane (ISO) arsenic atom (ISO) benzo[a]pyrene (ISO) bisphenol A (EXP,ISO) cadmium dichloride (EXP) cantharidin (ISO) carbon nanotube (ISO) carmustine (ISO) CGP 52608 (ISO) chlorpyrifos (ISO) cisplatin (EXP) diclofenac (ISO) diquat (ISO) doxorubicin (ISO) endosulfan (EXP) ethanol (ISO) furan (EXP) genistein (ISO) glutathione (EXP) leflunomide (EXP) methimazole (EXP) N-methyl-4-phenylpyridinium (EXP) N-nitrosodimethylamine (EXP) paracetamol (EXP,ISO) perfluorobutyric acid (ISO) perfluorohexanesulfonic acid (ISO) perfluorononanoic acid (ISO) perfluorooctanoic acid (ISO) piperonyl butoxide (EXP) pirinixic acid (EXP) propiconazole (ISO) rotenone (EXP,ISO) silicon dioxide (ISO) silver atom (ISO) silver(0) (ISO) sodium dichromate (EXP) Soman (EXP) sunitinib (ISO) temozolomide (ISO) testosterone (ISO) testosterone enanthate (ISO) tetrachloroethene (ISO) tetrachloromethane (EXP) thioacetamide (EXP) titanium dioxide (ISO) triadimefon (EXP) trichloroethene (EXP) triclosan (ISO) trovafloxacin (ISO) valdecoxib (EXP) valproic acid (ISO)
Extl1 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 5 151,857,629 - 151,872,830 (-) NCBI GRCr8 mRatBN7.2 5 146,573,911 - 146,589,115 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 5 146,573,912 - 146,589,115 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 5 149,275,765 - 149,290,999 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 5 151,046,051 - 151,061,260 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 5 151,031,993 - 151,047,229 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 5 152,573,755 - 152,588,956 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 5 152,573,758 - 152,589,719 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 5 156,370,680 - 156,385,881 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 5 153,100,524 - 153,115,725 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 5 153,111,846 - 153,125,700 (-) NCBI Celera 5 144,991,344 - 145,006,533 (-) NCBI Celera Cytogenetic Map 5 q36 NCBI
EXTL1 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 26,021,775 - 26,036,464 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 26,019,884 - 26,036,464 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 26,348,266 - 26,362,955 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 26,220,858 - 26,235,542 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 1 26,032,412 - 26,047,074 NCBI Celera 1 24,744,947 - 24,759,633 (+) NCBI Celera Cytogenetic Map 1 p36.11 NCBI HuRef 1 24,602,356 - 24,617,064 (+) NCBI HuRef CHM1_1 1 26,461,500 - 26,476,184 (+) NCBI CHM1_1 T2T-CHM13v2.0 1 25,859,174 - 25,873,866 (+) NCBI T2T-CHM13v2.0
Extl1 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 4 134,083,684 - 134,099,893 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 4 134,083,683 - 134,111,161 (-) Ensembl GRCm39 Ensembl GRCm38 4 134,356,373 - 134,372,547 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 4 134,356,372 - 134,383,850 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 4 133,912,288 - 133,928,462 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 4 133,628,449 - 133,643,855 (-) NCBI MGSCv36 mm8 Celera 4 132,536,140 - 132,552,312 (-) NCBI Celera Cytogenetic Map 4 D2.3 NCBI cM Map 4 66.63 NCBI
Extl1 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955452 5,473,343 - 5,505,163 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955452 5,490,801 - 5,506,178 (+) NCBI ChiLan1.0 ChiLan1.0
EXTL1 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 200,837,629 - 200,852,340 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 199,935,441 - 199,950,150 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 25,280,371 - 25,295,083 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 26,346,391 - 26,361,118 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 1 26,346,391 - 26,361,118 (+) Ensembl panpan1.1 panPan2
EXTL1 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 2 73,931,074 - 73,946,488 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 2 73,932,090 - 73,945,930 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 2 70,507,357 - 70,522,741 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 2 74,493,975 - 74,509,417 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 2 74,493,976 - 74,508,731 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 2 71,317,578 - 71,332,968 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 2 72,323,905 - 72,339,322 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 2 73,327,697 - 73,343,117 (-) NCBI UU_Cfam_GSD_1.0
Extl1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405058 44,743,819 - 44,755,815 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936474 10,568,603 - 10,580,632 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936474 10,568,649 - 10,580,597 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
EXTL1 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 6 83,462,323 - 83,476,596 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 6 83,461,421 - 83,476,601 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 6 77,097,055 - 77,112,254 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
EXTL1 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 20 106,733,058 - 106,748,183 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 20 106,734,146 - 106,747,149 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666033 9,669,586 - 9,684,584 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Extl1 (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 136 Count of miRNA genes: 114 Interacting mature miRNAs: 123 Transcripts: ENSRNOT00000022522 Prediction methods: Miranda, Rnahybrid Result types: miRGate_prediction
1331796 Thshl2 Thyroid stimulating hormone level QTL 2 2.3 blood thyroid-stimulating hormone amount (VT:0005119) serum thyroid stimulating hormone level (CMO:0001248) 5 97059760 147465714 Rat 10053720 Scort26 Serum corticosterone level QTL 26 2.06 0.0147 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 5 124965598 166875058 Rat 1549845 Scl44 Serum cholesterol level QTL 44 6 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 5 40128307 148607290 Rat 8552960 Pigfal15 Plasma insulin-like growth factor 1 level QTL 15 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 5 111416838 156416838 Rat 2302369 Scl60 Serum cholesterol level QTL 60 3.13 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 5 143608201 161165651 Rat 631562 Apr2 Acute phase response QTL 2 3.7 blood murinoglobulin 1 amount (VT:0010597) plasma murinoglobulin 1 level (CMO:0001931) 5 135927956 166875058 Rat 61444 Strs2 Sensitivity to stroke QTL 2 4.7 cerebrum integrity trait (VT:0010549) post-insult time to onset of cerebrovascular lesion (CMO:0002343) 5 135929696 166875058 Rat 1300119 Bp180 Blood pressure QTL 180 3.82 arterial blood pressure trait (VT:2000000) blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) 5 144358090 157869054 Rat 70156 Niddm30 Non-insulin dependent diabetes mellitus QTL 30 3.98 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) 5 129132447 151006154 Rat 8552908 Pigfal4 Plasma insulin-like growth factor 1 level QTL 4 6.6 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 5 128506074 166875058 Rat 61393 Bp7 Blood pressure QTL 7 4.5 0.0001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 5 60293434 161481680 Rat 7794791 Mcs33 Mammary carcinoma susceptibility QTL 33 1.93 mammary gland integrity trait (VT:0010552) mammary tumor incidence/prevalence measurement (CMO:0000946) 5 131345754 166875058 Rat 7207486 Bss109 Bone structure and strength QTL 109 femur strength trait (VT:0010010) femur total energy absorbed before break (CMO:0001677) 5 106906205 151906205 Rat 7207481 Bss106 Bone structure and strength QTL 106 7.9 femur strength trait (VT:0010010) femur ultimate force (CMO:0001675) 5 106906205 151906205 Rat 1302790 Scl20 Serum cholesterol level QTL 20 6.4 0.0001 blood cholesterol amount (VT:0000180) plasma total cholesterol level (CMO:0000585) 5 82394392 166664054 Rat 1598861 Cm64 Cardiac mass QTL 64 2.9 heart mass (VT:0007028) heart weight to body weight ratio (CMO:0000074) 5 127798274 166875058 Rat 1578766 Tcas11 Tongue tumor susceptibility QTL 11 4.12 tongue integrity trait (VT:0010553) number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950) 5 46711509 161317411 Rat 631263 Cm24 Cardiac mass QTL 24 3.5 heart mass (VT:0007028) heart left ventricle weight to body weight ratio (CMO:0000530) 5 143799107 158428037 Rat 631505 Bp103 Blood pressure QTL 103 3.2 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 5 132717196 165560427 Rat 1549838 Bss4 Bone structure and strength QTL 4 9.2 femur strength trait (VT:0010010) femur midshaft polar moment of inertia (CMO:0001669) 5 106906205 151906205 Rat 1641920 Colcs1 Colorectal carcinoma susceptibility QTL 1 2.99 0.0055 intestine integrity trait (VT:0010554) benign colorectal tumor surface area measurement (CMO:0001799) 5 121846814 166846814 Rat 8694169 Bw148 Body weight QTL 148 5 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 5 128506074 166875058 Rat 1331721 Bp210 Blood pressure QTL 210 3.413 arterial blood pressure trait (VT:2000000) blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) 5 143069996 166846814 Rat 8657050 Bw146 Body weight QTL 146 19.84 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 5 108938288 153938288 Rat 1576314 Eutr1 Estrogen induced uterine response QTL 1 uterus integrity trait (VT:0010575) pyometritis severity score (CMO:0002009) 5 2138965 166875058 Rat 2317056 Wbc3 White blood cell count QTL 3 2.51 0.01 leukocyte quantity (VT:0000217) white blood cell count (CMO:0000027) 5 105999803 150999803 Rat 634349 Bp139 Blood pressure QTL 139 0.001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 5 128924607 166875058 Rat 724525 Bp147 Blood pressure QTL 147 4.3 0.0001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 5 126424772 166875058 Rat 1598847 Cm62 Cardiac mass QTL 62 3.4 heart mass (VT:0007028) heart weight to body weight ratio (CMO:0000074) 5 108845856 153845856 Rat 2293642 Bss37 Bone structure and strength QTL 37 4.64 0.0001 femur strength trait (VT:0010010) femur ultimate force (CMO:0001675) 5 120740824 151018848 Rat 1578673 Bmd13 Bone mineral density QTL 13 4.9 femur mineral mass (VT:0010011) trabecular volumetric bone mineral density (CMO:0001729) 5 103689353 148689353 Rat 738018 Anxrr4 Anxiety related response QTL 4 5.1 exploratory behavior trait (VT:0010471) percentage of entries into a discrete space in an experimental apparatus (CMO:0000961) 5 130130159 166875058 Rat 2313096 Bmd78 Bone mineral density QTL 78 3.1 0.0001 tibia mineral mass (VT:1000283) total volumetric bone mineral density (CMO:0001728) 5 144377876 161317411 Rat 7207488 Bss110 Bone structure and strength QTL 1 8.4 femur strength trait (VT:0010010) femur stiffness (CMO:0001674) 5 106906205 151906205 Rat 8694441 Bw169 Body weight QTL 169 17.61 0.001 retroperitoneal fat pad mass (VT:0010430) retroperitoneal fat pad weight to body weight ratio (CMO:0000635) 5 111416838 156416838 Rat 7207491 Bss112 Bone structure and strength QTL 112 7 femur morphology trait (VT:0000559) femur midshaft cortical cross-sectional area (CMO:0001663) 5 106906205 151906205 Rat 8694389 Bw160 Body weight QTL 160 6.17 0.001 body lean mass (VT:0010483) lean tissue morphological measurement (CMO:0002184) 5 111416838 156416838 Rat 1354598 Srn6 Serum renin concentration QTL 6 3.8 blood renin amount (VT:0003349) plasma renin activity level (CMO:0000116) 5 69540295 151018848 Rat 8694198 Abfw3 Abdominal fat weight QTL 3 16.13 0.001 visceral adipose mass (VT:0010063) abdominal fat pad weight to body weight ratio (CMO:0000095) 5 111416838 156416838 Rat 1298089 Scl14 Serum cholesterol level QTL 14 5.8 0.0004 blood cholesterol amount (VT:0000180) plasma total cholesterol level (CMO:0000585) 5 108845856 153845856 Rat 1598819 Bp292 Blood pressure QTL 292 4.3 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 5 127798274 166875058 Rat 1358187 Emca1 Estrogen-induced mammary cancer QTL 1 4.4 mammary gland integrity trait (VT:0010552) post-insult time to mammary tumor formation (CMO:0000345) 5 99216724 148607142 Rat
BE110173
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 5 146,573,936 - 146,574,096 (+) MAPPER mRatBN7.2 Rnor_6.0 5 152,573,780 - 152,573,939 NCBI Rnor6.0 Rnor_5.0 5 156,370,705 - 156,370,864 UniSTS Rnor5.0 RGSC_v3.4 5 153,100,549 - 153,100,708 UniSTS RGSC3.4 Celera 5 144,991,369 - 144,991,528 UniSTS RH 3.4 Map 5 989.9 UniSTS Cytogenetic Map 5 q36 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
109
91
90
59
25
59
6
218
97
89
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000022522 ⟹ ENSRNOP00000022522
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 5 146,573,912 - 146,589,115 (-) Ensembl Rnor_6.0 Ensembl 5 152,573,758 - 152,589,719 (-) Ensembl
RefSeq Acc Id:
NM_001107985 ⟹ NP_001101455
RefSeq Status:
PROVISIONAL
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 151,857,629 - 151,872,830 (-) NCBI mRatBN7.2 5 146,573,912 - 146,589,115 (-) NCBI Rnor_6.0 5 152,573,755 - 152,588,956 (-) NCBI Rnor_5.0 5 156,370,680 - 156,385,881 (-) NCBI RGSC_v3.4 5 153,100,524 - 153,115,725 (-) RGD Celera 5 144,991,344 - 145,006,533 (-) RGD
Sequence:
GCCTCCTTCCCTACTTGCTACAGAAATTCCTAATTTCCTTCTAGCCCTAGCTGTGGGTGGCCACATGCTGTGGAGAAGAAAGTCCTTCTGGCTGGCATTGTCAGCCTTCTGGCTCCTCCTCATCCTCC TAGGAGTCTTCCCCCTTCGCCTGGCAGTGTCTCCCCGTCCTCTTCCAGGGCGCTCCCAAGGTTGGCCCCGCTGGCTGGATGCTACCTTCCTACAGAGTTTCTCCCAGCCTGAGACGAACCCCGAAGAA GATGTTCAACAGCTCCCTCGAGTCTCCCGGGGGAGCAGCTGCACCTGGGGAGCCTGCTTTGACACCTCCAAATGTAGGGGGAAAGTCCTCAAGATCTTTGTACACTCCGCGGCTGGTCCGACCACTGA GGCTCAGCGCAGGATCCTGGACTCCTTGGAGGGCTCCCGCTACTATGCACTCAGCCCAGCGGAGGCTTGCCTTCTCCTCTTTCTCCCCAGCCAGGACCGTAGAGGAGCATGCGGGCCCCTGCCTCCGA ACTGGAACGGAGGCCGGAACCATCTGGTGCTCAGTCTCTACCCAGCCCCTTGCACCAGGCTGGGACAGGCGATGGTAGCTGAGGCTAGCCCCTCCTTGGACATCTTCCGACCAGGCTTCGATGTAGCG CTCCCGTATCTCCCTGAAGCTCACCCATTGAAAGGCGGGGCCCCTGGCAGCCTGCAGCGGCACGGTCCCCAGCCTGGGGCCACCTTAGTGGCGGTAGCAGAGGAGAGGGGCAGGTGGCGTATTACAAC CACCCACGCCTCAGCCTGCCCCTGGGACAGGAACTGTGAACAAGATCCTGGACCCCAACAGACCTACCCAGGAGAGATACTTCCCAATGTCACCTTCTGCCTCATTCCTGGCCACCGATCTGCTACCT CCTGCTTTCTCCAAGCCCTTCAGGCTGGCTGCATCCCTGTGCTCCTCAGCCCCCGCTGGGAGCTGCCTTTCTCTGAAGTCATCGACTGGACCAAAGCAGCCATCGTTGCGGATGAGAGGCTCCCACTG CAGGTTCTGGCTGCGCTCCGTGAAATGCTCCCTTCGCGGGTTCTCGCCCTGCGCCAGCAGACCCAGTTTCTGTGGACCGCTTACTTCTCCTCAGTGGAAAAAGTCGTTCATACCACCCTAGAGATCAT TCAGGACCGGATCTGGGGTGCATCAGCTCACCCCTCACTGATGTGGAATAGCCCCCCGGGGGCACTCCTGGCTCTGCCCACTTTTTCCACGAGCCTTCAAGACTTCCCCTTTTATCATCTGCAACTGG GCTCCAGCCCTGGGAGCAGTTTCAGCGCCGTGATCTGGGTGGGCGTCTCCGAAGAGTCCCCGCCGAAGCTCATCCAGGAAGTGGCAGGTTCCCGGCACTGTGCCCAGATCCTGATCCTCTGGAACAGT GAGAAGCCACCCCCTGATAGGTGGCCCAAGACAGCAGTGCCCCTAACAGTCATTGAGGGACACAGGAAGGTCAGCGACCGTTTCTTCCTGTACAGCAACATCAGCACCAATGTCATCCTCAGCCTTGA TGCTCAGAGCACTCTTTCTACCAGTGAGGTGGACTTTGCCTTTGTGGTGTGGCAGAGTTTTCCTGAGCGGATGGTGGGCTTTGTGACGTGGAGCCACTTCTGGGATGAGGCCCGGCAGGGCTGGGGCT ACAGTGCTGAGATGGCCAATGAATTCTCCATGGTCCTGACCACCGCGGCTTTCTACCACAGATACTACCACACCCTCTTCACTCACTCCCTGCCTAAAGCCCTGAGGAGCATAGCCGATGAGACTCCC ACCTGTGTTGACATCCTGATGAACTTCCTGGTAGCAACCGTCACCAAACTGCCCCCTATCAAGGTGCCTTACAGCAGGCAGCACCAGGAGGCTGCACCAATGGCTTCTGAGGGTCCAAGACCCGTGCC GGAGCCTCAGGCCCTGGATCAGGACTGCATCAACCGTTTAGCAGCAGGGCTGGGCCACATGCCTCTGGTTTCCTCTCGAGTGCGTCTGGATCCGGTGCTGTTCAAGGACCCGGTATCAGTGCAACGCA AGAAGTATCGCAGTTTAGAGAAACCCTAGGCGAGTCGCTCTAACTGCCTGCTGGACACGAGACAGATCAAAGTCCTGTCCTGGTTGGCCAATCACAATAGGGATTGCTGAGGGCCGGGAACCCGGACC TTCCCCGGCTGCGGTGGGGTTGCGTTTGGCACGTTTCGTACAGGCCGGTGTACAGGATGGTGCACAGGCTCATCTTGTTCCCCGAAATGGCTTTCTCTGCATCTCTGCCTGGTCCACATCTGACCCGC ACTCACCTCCTTGGTGGTCTCGAAGTCCTCGCACGATTCCCGCCCAGTGGCCTTGAGCACACCACCCGGCCCCAGGACCCGCCTGGGAGCTCCGGAGAACGGGTCCTGCCCTCCTCTCTTTGGTCTGG CAGGTGCATTGTGCGTATTTGAGCAATGGCTGCGAGAGTATTAACTGGTTGCCAGCGTGGGGGAACACGGGCAGAATGTGCACTAGACAATACGCTGTCCCTTACCCTGGAGTCAACGTAGAATGCAG TCACCAGGATTGCCAGGATCAATCAAGAGTGAACAGAGGTCAGGAGTCCGGGATAACCAGAGGATTGGGTGTTGCGTGCCAGCTTCACGGCAGACGCCGAATCTTGGGTGACCAGCAGCATTGCACTA CCAATATTGACCACTAGAGGTCAGCTGCTGCACTTCTCTCCCTCCAAAGGAATGAAGTTTGGTTTTGCTTTCTTTATAGTTTGTTATTGCTTTTGTTTGTTTGTTTTTGTTTTTGTTTTTCAAGTAAG GGTTTCTCTGGGTAGTCTTGGCTGTCCTGGAACTCACTCTGTATGCCAGGTTGGCCTCAAATTCACAGAGATCCACCTGCCGTTCGCTTCCTGAGTGCTGAGATTAAATTCATGCACTACACTCCCCG ACTGCTTCTTGAATTTAGAGGGTCGGGAGGGGGGAGGAGGCGAGACAAGGTCCGAGTCTGTAACCCACTCTGGCCTGGAACTCTACAGCAGTCTTATTGCCTCAGTTTTCCAAGTGTTAGAGTTACAG GGGTGAGCCACAGTGCCAGACTGAAATGGAGTTAAAGACTACCGATAAAATGGGGCACTGGTGTGTGCAGACCCTAGTATGAGAACCTGGGAGGAATATGACAGAACTCCACTTTGACCCAAACACTT GGAGCTCGGGTTGTTGGCAGATGGGCTGGTCCTGAGGAAGAGAGCTGTCCTCAGCGTCCTGTAGGTGAGAGTGGAGTGGGGGAGGGGAGGCTGCTTTTCCTGGGTTCATCCACCTGGAACTGGAATTA TCGCTTCCGAAATAAAGCACGTGTCCTTGCCCACTC
hide sequence
RefSeq Acc Id:
NP_001101455 ⟸ NM_001107985
- UniProtKB:
D3ZLU1 (UniProtKB/TrEMBL), A6IT18 (UniProtKB/TrEMBL)
- Sequence:
MLWRRKSFWLALSAFWLLLILLGVFPLRLAVSPRPLPGRSQGWPRWLDATFLQSFSQPETNPEEDVQQLPRVSRGSSCTWGACFDTSKCRGKVLKIFVHSAAGPTTEAQRRILDSLEGSRYYALSPAE ACLLLFLPSQDRRGACGPLPPNWNGGRNHLVLSLYPAPCTRLGQAMVAEASPSLDIFRPGFDVALPYLPEAHPLKGGAPGSLQRHGPQPGATLVAVAEERGRWRITTTHASACPWDRNCEQDPGPQQT YPGEILPNVTFCLIPGHRSATSCFLQALQAGCIPVLLSPRWELPFSEVIDWTKAAIVADERLPLQVLAALREMLPSRVLALRQQTQFLWTAYFSSVEKVVHTTLEIIQDRIWGASAHPSLMWNSPPGA LLALPTFSTSLQDFPFYHLQLGSSPGSSFSAVIWVGVSEESPPKLIQEVAGSRHCAQILILWNSEKPPPDRWPKTAVPLTVIEGHRKVSDRFFLYSNISTNVILSLDAQSTLSTSEVDFAFVVWQSFP ERMVGFVTWSHFWDEARQGWGYSAEMANEFSMVLTTAAFYHRYYHTLFTHSLPKALRSIADETPTCVDILMNFLVATVTKLPPIKVPYSRQHQEAAPMASEGPRPVPEPQALDQDCINRLAAGLGHMP LVSSRVRLDPVLFKDPVSVQRKKYRSLEKP
hide sequence
Ensembl Acc Id:
ENSRNOP00000022522 ⟸ ENSRNOT00000022522
RGD ID: 13694136
Promoter ID: EPDNEW_R4661
Type: single initiation site
Name: Extl1_1
Description: exostosin-like glycosyltransferase 1
SO ACC ID: SO:0000170
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Experiment Methods: Single-end sequencing.
Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 5 152,589,717 - 152,589,777 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2013-03-20
Extl1
exostosin-like glycosyltransferase 1
Extl1
exostoses (multiple)-like 1
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2008-04-30
Extl1
exostoses (multiple)-like 1
Extl1_predicted
exostoses (multiple)-like 1 (predicted)
'predicted' is removed
2292626
APPROVED
2005-01-12
Extl1_predicted
exostoses (multiple)-like 1 (predicted)
Symbol and Name status set to approved
70820
APPROVED