Cipc (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 6 | 112,325,980 - 112,344,692 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 106,595,011 - 106,613,732 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 106,595,105 - 106,613,723 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 6 | 106,762,302 - 106,780,982 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 107,061,165 - 107,079,845 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 106,430,805 - 106,449,485 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 110,968,014 - 110,990,912 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 110,968,061 - 110,990,912 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 120,260,096 - 120,281,691 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 6 | 111,075,234 - 111,098,343 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 6 | 111,079,282 - 111,099,306 (+) | NCBI | | | | | Celera | 6 | 104,417,359 - 104,435,465 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | q31 | NCBI | | | | |
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CIPC (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 14 | 77,098,258 - 77,117,287 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 14 | 77,098,126 - 77,117,287 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 14 | 77,564,601 - 77,583,630 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 14 | 76,634,331 - 76,653,383 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 14 | 76,634,330 - 76,653,382 | NCBI | | | | | Celera | 14 | 57,603,166 - 57,622,223 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | q24.3 | NCBI | | | | | HuRef | 14 | 57,732,271 - 57,751,328 (+) | NCBI | | HuRef | | | CHM1_1 | 14 | 77,502,995 - 77,522,047 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 14 | 71,308,042 - 71,327,053 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Cipc (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 12 | 86,993,817 - 87,012,138 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 12 | 86,993,817 - 87,012,136 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 12 | 86,944,741 - 86,965,364 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 12 | 86,947,043 - 86,965,362 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 12 | 88,287,993 - 88,306,314 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 12 | 87,836,514 - 87,852,908 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 12 | 88,410,550 - 88,429,016 (+) | NCBI | | Celera | | | Cytogenetic Map | 12 | D2 | NCBI | | | | | cM Map | 12 | 41.13 | NCBI | | | | |
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Cipc (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955438 | 1,016,086 - 1,036,372 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955438 | 1,016,721 - 1,036,379 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CIPC (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 15 | 78,179,707 - 78,201,740 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 14 | 77,396,221 - 77,418,244 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 14 | 57,652,018 - 57,671,107 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 14 | 76,854,392 - 76,873,509 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 14 | 76,854,661 - 76,873,509 (+) | Ensembl | panpan1.1 | | panPan2 | |
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CIPC (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 8 | 49,926,494 - 49,947,006 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 8 | 49,926,978 - 49,945,326 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 8 | 49,614,515 - 49,635,023 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 8 | 50,160,377 - 50,180,724 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 8 | 50,160,774 - 50,180,704 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 8 | 49,823,175 - 49,843,510 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 8 | 49,846,309 - 49,866,794 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 8 | 50,244,557 - 50,264,886 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Cipc (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024408640 | 26,114,722 - 26,193,993 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936488 | 5,938,170 - 5,953,812 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936488 | 5,938,328 - 5,954,246 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CIPC (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 7 | 100,180,970 - 100,197,837 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 100,180,389 - 100,199,529 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 106,212,583 - 106,229,525 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CIPC (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 24 | 54,341,807 - 54,360,949 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 24 | 54,349,341 - 54,357,937 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666053 | 42,543,210 - 42,562,437 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Cipc (Heterocephalus glaber - naked mole-rat) |
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