Advanced Search (OLGA)

Gene: Acbd5 (acyl-CoA binding domain containing 5) Rattus norvegicus

Analyze

Symbol:

Acbd5

Name:

acyl-CoA binding domain containing 5

RGD ID:

1309411

Description:

Predicted to enable fatty-acyl-CoA binding activity. Predicted to be involved in fatty acid metabolic process and pexophagy. Predicted to be located in peroxisomal membrane. Predicted to be active in peroxisome. Human ortholog(s) of this gene implicated in retinal dystrophy with leukodystrophy. Orthologous to human ACBD5 (acyl-CoA binding domain containing 5); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

acyl-CoA-binding domain-containing protein 5; acyl-Coenzyme A binding domain containing 5; LOC307170

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ACBD5 (acyl-CoA binding domain containing 5)	HGNC	Ensembl, HomoloGene, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Acbd5 (acyl-Coenzyme A binding domain containing 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Acbd5 (acyl-CoA binding domain containing 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ACBD5 (acyl-CoA binding domain containing 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ACBD5 (acyl-CoA binding domain containing 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Acbd5 (acyl-CoA binding domain containing 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ACBD5 (acyl-CoA binding domain containing 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ACBD5 (acyl-CoA binding domain containing 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Acbd5 (acyl-CoA binding domain containing 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Acbd5 (acyl-CoA binding domain containing 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	ACBD5 (acyl-CoA binding domain containing 5)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Acbd5 (acyl-Coenzyme A binding domain containing 5)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	acbd5b (acyl-CoA binding domain containing 5b)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	acbd5a (acyl-CoA binding domain containing 5a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	acbd5a (acyl-CoA binding domain containing 5a)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG8814	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	acbp-4	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	acbp-4	Alliance	DIOPT (OrthoInspector\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	maa-1	Alliance	DIOPT (InParanoid\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	maa-1	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	acbp-3	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	acbd5	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	acbd5	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	90,114,250 - 90,156,286 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	90,114,375 - 90,156,286 (+)	Ensembl				GRCr8
mRatBN7.2	17	85,206,178 - 85,248,909 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	85,206,303 - 85,248,215 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	88,690,500 - 88,732,433 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	92,525,889 - 92,567,809 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	86,542,673 - 86,584,588 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	89,882,465 - 89,923,982 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	89,883,615 - 89,923,423 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	91,547,980 - 91,589,933 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	96,677,365 - 96,716,091 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	83,649,881 - 83,688,324 (-)	NCBI		Celera
RGSC_v3.1	17	96,686,182 - 96,728,835 (+)	NCBI
Cytogenetic Map	17	q12.3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

cone-rod dystrophy (ISO)

fundus dystrophy (ISO)

genetic disease (ISO)

peroxisomal disease (ISS)

retinal dystrophy with leukodystrophy (ISO)

retinitis pigmentosa 1 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(1->4)-beta-D-glucan (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

aldrin (ISO)

amitrole (EXP)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

Benzo[k]fluoranthene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

caffeine (ISO)

carbon nanotube (ISO)

chlorpyrifos (ISO)

choline (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

doxorubicin (ISO)

ethanol (ISO)

folic acid (ISO)

FR900359 (ISO)

glafenine (EXP)

GSK-J4 (ISO)

hydrogen peroxide (ISO)

indometacin (ISO)

ivermectin (ISO)

ketamine (EXP)

L-methionine (ISO)

lead(0) (ISO)

leflunomide (ISO)

malathion (ISO)

methapyrilene (EXP)

methidathion (ISO)

methimazole (EXP)

methylmercury chloride (ISO)

N-nitrosodiethylamine (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

paraoxon (ISO)

PCB138 (EXP)

perfluorooctane-1-sulfonic acid (ISO)

permethrin (ISO)

pirinixic acid (ISO)

pregnenolone 16alpha-carbonitrile (EXP,ISO)

propiconazole (ISO)

resveratrol (ISO)

rimonabant (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

sunitinib (ISO)

tetrachloromethane (EXP,ISO)

tetracycline (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

triptonide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

autophagy (IEA)

fatty acid metabolic process (IBA)

pexophagy (IEA,ISO)

Cellular Component

cytoplasm (IBA)

peroxisomal membrane (IEA)

peroxisome (IBA,ISO)

Molecular Function

fatty-acyl-CoA binding (IBA,IEA)

lipid binding (IEA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:19946888	PMID:24535825

Genomics

Comparative Map Data

Acbd5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	90,114,250 - 90,156,286 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	90,114,375 - 90,156,286 (+)	Ensembl				GRCr8
mRatBN7.2	17	85,206,178 - 85,248,909 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	85,206,303 - 85,248,215 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	88,690,500 - 88,732,433 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	92,525,889 - 92,567,809 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	86,542,673 - 86,584,588 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	89,882,465 - 89,923,982 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	89,883,615 - 89,923,423 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	91,547,980 - 91,589,933 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	96,677,365 - 96,716,091 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	83,649,881 - 83,688,324 (-)	NCBI		Celera
RGSC_v3.1	17	96,686,182 - 96,728,835 (+)	NCBI
Cytogenetic Map	17	q12.3	NCBI

ACBD5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	27,182,838 - 27,242,111 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	27,168,135 - 27,243,046 (-)	Ensembl			hg38	GRCh38
GRCh37	10	27,471,767 - 27,531,040 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	27,524,149 - 27,571,065 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	10	27,525,752 - 27,569,718	NCBI
Celera	10	27,200,570 - 27,247,485 (-)	NCBI		Celera
Cytogenetic Map	10	p12.1	NCBI
HuRef	10	27,152,803 - 27,199,482 (-)	NCBI		HuRef
CHM1_1	10	27,484,073 - 27,531,001 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	27,212,829 - 27,273,060 (-)	NCBI		T2T-CHM13v2.0

Acbd5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	22,958,189 - 23,004,525 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	22,958,179 - 23,005,570 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	23,068,166 - 23,114,513 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	23,068,167 - 23,115,558 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	22,923,721 - 22,970,033 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	22,891,458 - 22,936,519 (+)	NCBI		MGSCv36	mm8
Celera	2	22,799,879 - 22,846,172 (+)	NCBI		Celera
Cytogenetic Map	2	A3	NCBI
cM Map	2	15.21	NCBI

Acbd5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955429	2,621,904 - 2,659,537 (-)	Ensembl
ChiLan1.0	NW_004955429	2,623,042 - 2,661,182 (-)	NCBI	ChiLan1.0	ChiLan1.0

ACBD5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	39,824,767 - 39,871,691 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	39,830,094 - 39,877,018 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	27,292,094 - 27,351,332 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	27,654,359 - 27,712,710 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	27,666,395 - 27,711,423 (-)	Ensembl			panPan2	panpan1.1

ACBD5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	6,873,207 - 6,923,152 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	6,874,831 - 6,922,082 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	5,626,332 - 5,676,376 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	5,062,819 - 5,112,916 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	5,062,761 - 5,111,947 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	4,440,160 - 4,490,195 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	4,516,672 - 4,569,045 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	4,683,337 - 4,734,042 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Acbd5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	26,059,656 - 26,104,217 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936484	2,225,659 - 2,271,668 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936484	2,224,308 - 2,268,302 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ACBD5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	48,866,933 - 48,922,262 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	10	48,883,116 - 48,922,377 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	54,189,852 - 54,228,634 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ACBD5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	26,795,072 - 26,844,013 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	26,794,822 - 26,842,134 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666051	32,804,512 - 32,852,650 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Acbd5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624796	2,261,009 - 2,297,982 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Acbd5
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	14	1,477,843 - 1,520,673 (-)	NCBI		Rrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	27
Count of miRNA genes:	26
Interacting mature miRNAs:	27
Transcripts:	ENSRNOT00000066061
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300131	Bp193	Blood pressure QTL 193	3.3		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	68550040	93515804	Rat
1300148	Bp192	Blood pressure QTL 192	3.47		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	17	46050126	91050126	Rat
61466	Niddm12	Non-insulin dependent diabetes mellitus QTL 12	3.2	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	17	65154872	93515804	Rat
4889894	Eae33	Experimental allergic encephalomyelitis QTL 33	5.2	0.0001	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	17	55604597	93006569	Rat
2317038	Ginf3	Gastrointestinal inflammation QTL 3	2.89	0.005	liver integrity trait (VT:0010547)	liver granuloma severity score (CMO:0002157)	17	54829503	93515804	Rat

Markers in Region

RH131811

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	85,247,764 - 85,247,977 (-)	MAPPER	mRatBN7.2
Rnor_6.0	17	89,882,703 - 89,882,915	NCBI	Rnor6.0
Rnor_5.0	17	91,548,218 - 91,548,430	UniSTS	Rnor5.0
RGSC_v3.4	17	96,717,555 - 96,717,767	UniSTS	RGSC3.4
RH 3.4 Map	17	843.8	UniSTS
Cytogenetic Map	17	q12.3	UniSTS

UniSTS:234876

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	1,451,157 - 1,451,465 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	89,879,912 - 89,880,219	NCBI	Rnor6.0
Rnor_6.0	5	846,487 - 846,794	NCBI	Rnor6.0
Rnor_5.0	5	841,674 - 841,981	UniSTS	Rnor5.0
Rnor_5.0	17	91,544,829 - 91,545,136	UniSTS	Rnor5.0
RGSC_v3.4	5	520,113 - 520,420	UniSTS	RGSC3.4
Celera	5	1,095,352 - 1,095,659	UniSTS
Cytogenetic Map	5	q11	UniSTS
Cytogenetic Map	17	q12.3	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001077635	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001399254	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254343	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254346	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254351	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254352	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600580	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600581	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600582	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600583	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095810	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095811	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095812	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095813	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095815	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095816	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095817	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276504	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276507	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276509	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276510	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276511	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276512	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276516	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276517	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276518	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276519	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC101874	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC160814	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EF026991	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EF026992	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000076964 ⟹ ENSRNOP00000068154

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	90,115,152 - 90,156,286 (+)	Ensembl
mRatBN7.2 Ensembl	17	85,207,076 - 85,248,215 (+)	Ensembl
Rnor_6.0 Ensembl	17	89,883,615 - 89,923,423 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093822 ⟹ ENSRNOP00000076762

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	90,114,375 - 90,151,825 (+)	Ensembl
mRatBN7.2 Ensembl	17	85,206,303 - 85,246,305 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000104691 ⟹ ENSRNOP00000092017

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	90,115,159 - 90,156,283 (+)	Ensembl
mRatBN7.2 Ensembl	17	85,207,076 - 85,248,215 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000130190 ⟹ ENSRNOP00000107708

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	90,115,211 - 90,156,281 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000138217 ⟹ ENSRNOP00000112606

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	90,115,444 - 90,156,281 (+)	Ensembl

RefSeq Acc Id:

NM_001077635 ⟹ NP_001071103

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,114,326 - 90,156,286 (+)	NCBI
mRatBN7.2	17	85,206,254 - 85,248,215 (+)	NCBI
Rnor_6.0	17	89,884,377 - 89,923,422 (-)	NCBI
Rnor_5.0	17	91,547,980 - 91,589,933 (-)	NCBI
RGSC_v3.4	17	96,677,365 - 96,716,091 (+)	RGD
Celera	17	83,649,881 - 83,688,324 (-)	RGD

Sequence:

show sequence

AAGTTTTATGCAGGCTCTTGGGAAAGCTGGATCTGCTGCTGCTGTGTGATTCCCGTGGACAGAC
CTTGGGACCGGGGCCGGCGCTGGCAGCTGGAGATGGCGGACACACGATCAGTGTATGAAACCAG
GTTTGAGGCGGCCGTGAAGGTGATCCAAAGTTTGCCGAAAAATGGATCATTCCAGCCAACGAAT
GAAATGATGCTCAGGTTCTACAGCTTCTACAAGCAGGCAACTGAAGGACCCTGTAAACTCTCAA
GGCCCGGGTTCTGGGATCCTATTGGAAGATATAAATGGGATGCTTGGAGTTCCCTGGGTGATAT
GACTAAAGAAGAAGCCATGATTGCATATGTTGAAGAAATGAAAAAGATTATTGAAACTATGCCC
ATGACTGAGAAAGTAGAAGAGTTGCTACATGTTATAGGTCCATTTTATGAGATTGTAGAAGACA
AAAAGAACAGCAAGAGTTCTGACTTGACCTCAGATCTTGGTAATGTTCTGACCTCTTCAAATGC
CAAAGCTGTTAATGGTAAAGCAGAGAGCAGTGATAGTGGGGCTGAGTCTGAGGAAGAAGAGGCC
CAAGAAGAGTTAAAAGGAGCAGAACAGAGTGGCAGTGATGATAAGAAAATGATGACAAAATCAA
CAGATAAGAATTTGGAAATCATTGTTACCAATGGCTATAAAGATAGCTTTGCTCAGGACAGTGA
CATTCATACTGATTCTTCCCGGAGTGCCAGACGAAGTGAAGACAAAAAGCCTACAGACCAGAGC
TCTCAGCAGACAGGAAACACTGTCCTCTGCGTTCACCAAGATACAAACGAAGACCCCGGTGAAG
ACGCTTCAGGAGTACATCATCTGACAAGTGACTCAGATAGTGAAGTATACTGTGATTCTATGGA
GCAATTTGGACAAGAGGAGTATTACTTAGGTGGTGATCCTGCTCAGCACTTGGAAGGTTCTGGT
TTTTGTGAAGATGCTCAACTCTCTCCTGGGAATGGCAGCATTGGGAAAATGCAGATGAGAGCAG
TCAAGGGAAAAGGTGAAGTGAAGCACGGAGGAGAAGATGGCAGAAGTAGCAGTGGAACGCCGCA
CCGTGAGAAGAGAGGCGGAGAGAGTGAGGACATCTCCGGTGTCAGGAGAGGGAGAGTAGGGCAT
AGAATGCCACATTTGAGTGAAGGAACCAAGGGTCGGCAAGTAGGAAGTGGAGGTGATGGAGAAC
GCTGGGGCTCAGACCGAGGGTCCAGAGGCAGCCTCAATGAGCAGATCGCTCTTGTGCTCATTAG
ATTGCAGGAGGACATGCAGAATGTTCTTCAGAGACTTCATAAACTGGAAACACTAACTGCTTCG
CAGGCGAAATTATCATGGCAGACAAGTAATCAGCCCTCCTCACAGAGACCATCTTGGTGGCCCT
TTGAGATGTCCCCTGGTGCATTAGCTTTTGCTATTATATGGCCTTTTATTGCTCAGTGGTTGGT
GCATTTGTATTATCAAAGAAGGAGAAGAAAACTAAATTGAAGACATGGCCTTTTACTCAAGAAG
ACTGCTGGGC

hide sequence

RefSeq Acc Id:

NM_001399254 ⟹ NP_001386183

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,152 - 90,156,286 (+)	NCBI
mRatBN7.2	17	85,207,080 - 85,248,215 (+)	NCBI

RefSeq Acc Id:

XM_006254343 ⟹ XP_006254405

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,140 - 90,156,286 (+)	NCBI
mRatBN7.2	17	85,207,120 - 85,248,909 (+)	NCBI
Rnor_6.0	17	89,882,465 - 89,923,742 (-)	NCBI
Rnor_5.0	17	91,547,980 - 91,589,933 (-)	NCBI

Sequence:

show sequence

GGTCCTCCGGTGACTCTGGGGCGGGGCTGTGGGGAGGGTGCCCACCGACTGCAGGACTTCTCAG
GAATGGGGGGTGTGGCTGGTCGACCAGCATCTTCCGGGTGGGAGAAAGGGTCCGCTATTACCGG
CGGCGCAACCTCCAAGGCCTGCTGCTAGAGATGCTCTTCCTCTCGTTTTATGCAGGCTCTTGGG
AAAGCTGGATCTGCTGCTGCTGTGTGATTCCCGTGGACAGACCTTGGGACCGGGGCCGGCGCTG
GCAGCTGGAGATGGCGGACACACGATCAGTGTATGAAACCAGGTTTGAGGCGGCCGTGAAGGTG
ATCCAAAGTTTGCCGAAAAATGGATCATTCCAGCCAACGAATGAAATGATGCTCAGGTTCTACA
GCTTCTACAAGCAGGCAACTGAAGGACCCTGTAAACTCTCAAGGCCCGGGTTCTGGGATCCTAT
TGGAAGATATAAATGGGATGCTTGGAGTTCCCTGGGTGATATGACTAAAGAAGAAGCCATGATT
GCATATGTTGAAGAAATGAAAAAGATTATTGAAACTATGCCCATGACTGAGAAAGTAGAAGAGT
TGCTACATGTTATAGGTCCATTCTATGAGATTGTAGAAGACAAAAAGAACAGCAAGAGTTCTGA
CTTGACCTCAGTCCGATTGGAGAAAATCTCCAAATACTTAGAAGATCTTGGTAATGTTCTGACC
TCTTCAAATGCCAAAGCTGTTAATGGTAAAGCAGAGAGCAGTGATAGTGGGGCTGAGTCTGAGG
AAGAAGAGGCCCAAGAAGAGTTAAAAGGAGCAGAACAGAGTGGCAGTGATGATAAGAAAATGAT
GACAAAATCAACAGATAAGAATTTGGAAATCATTGTTACCAATGGCTATAAAGATAGCTTTGCT
CAGGACAGTGACATTCATACTGATTCTTCCCGGAGTGCCAGACGAAGTGAAGACAAAAAGCCTA
CAGACCAGAGCTCTCAGCAGACAGGAAACACTGTCCTCTGCGTTCACCAAGATACAAACGAAGA
CCCCGGTGAAGACGCTTCAGGAGTACATCATCTGACAAGTGACTCAGATAGTGAAGTATACTGT
GATTCTATGGAGCAATTTGGACAAGAGGAGTATTACTTAGGTGGTGATCCTGCTCAGCACTTGG
AAGGTTCTGGTTTTTGTGAAGATGCTCAACTCTCTCCTGGGAATGGCAGCATTGGGAAAATGCA
GATGAGAGCAGTCAAGGGAAAAGGTGAAGTGAAGCACGGAGGAGAAGATGGCAGAAGTAGCAGT
GGAACGCCGCACCGTGAGAAGAGAGGCGGAGAGAGTGAGGACATCTCCGGTGTCAGGAGAGGGA
GAGGGCATAGAATGCCACATTTGAGTGAAGGAACCAAGGGTCGGCAAGTAGGAAGTGGAGGTGA
TGGAGAACGCTGGGGCTCAGACCGAGGGTCCAGAGGCAGCCTCAATGAGCAGATCGCTCTTGTG
CTCATTAGATTGCAGGAGGACATGCAGAATGTTCTTCAGAGACTTCATAAACTGGAAACACTAA
CTGCTTCGCAGGCGAAATTATCATGGCAGACAAGTAATCAGCCCTCCTCACAGAGACCATCTTG
GTGGCCCTTTGAGATGTCCCCTGGTGCATTAGCTTTTGCTATTATATGGCCTTTTATTGCTCAG
TGGTTGGTGCATTTGTATTATCAAAGAAGGAGAAGAAAACTAAATTGAAGACATGGCCTTTTAC
TCAAGAAGACTGCTGGGCCTGGATGACCTAAGAGATGGATTGGAAATGAAGTGGAATTCACAAG
AAAATCTCAGTTTGTGATGATTACATTTCTTTTTTTGTCCAGTAGTTTGGTTTATATACATAAA
TATTCTTTGCACTACACAAGATGATAACAATTTAAAGACTAATATTGCTGATACTTGAAAAATC
AATCTCAACTAGATTTTAAGTAGCATCCATAGACTTACTCTTTTTGAGCTTGAAGGACTTTAAA
TTATTAATTATTGTTCAGTAACAATCACCTGATTTTCTCCCATAAGAATTATAAGCTGCATTTC
TAAGGCATAGCTACAATTATGAGATAGAATTTATAATTTTTACTTTTCTAAATTAAACACAAGA
AAGAATACAAAAACAAGCGTGGCTTTTAAATGAGGCTAAATCAATTGTTTCAGTCACTGAAGTG
TCAGCCATGTAGCAGAAAACTGACGGAAGAATCCTTTACATTCTTTGTGGTCTGTACAGAAGAC
TGGGCTCTATTTAGTGGCTTGATTTCCCTGGCTTGCTCAGGGGAACTCAGAAAATCACCGCCCT
TGTACTGTGTTTACTGTTTACAAACGATCCGGTGAACAGACTGGAAGATGGAGATGGTGAAGAA
TAGGCCTCATGCCAGCTCTACAGATGGTTAATCAGATTTTATCCAGCCACACCCACTTCATCCT
CTGGAACCATTTTTTCTTTAAGTGAGGATATCTACTGTCTGCTTCATAGGGTGCTTTGCAATAA
AATGAAAACTTATTTATACTGTTTTTACTAAGGTAACAATTGCATGAAAATCCTTTTTTCTCCA
AGTGGTAAATGACAGTCTGGATTCCTAACCTCTTAGTGCCTCAGTTTTCCGGGGTATACTTCAC
AAGGTATCAGAAGTACCTTCAGTCCACAGGTCTCTACGTCCACGTGATTAAGGAATGCCTAACT
AATGGAAACTTACGTTCCTTCTAGCCATTAGAACAAAAGGAAGATTAATTTAGATCCTGGGAGA
CTATATTGAAAAATAATCTTCCTTGTGTACTTACCCAAACCTGTGCTAGGAAATATACTTTATG
CTTTGAAGATTTAACTTAAGAACTTTATAGCAAACCCTTTTCTGCTTTTCCTTTGGAGATAGTG
TTGGTAGCTCATGCCAACCCCCGGTTCACTGTGTAGTTAAAGAGGACCTTGAACACCTGATGGT
CCTGTCTCTACTGCTTTTCAGTTTCTGGGCCACAGGCATGTACCAGGGTAGCCAGCTTGGATAG
TAAAACATTTTAATTTGTTCTTGTTTTTAACGATGCTAAATGATGCTGGGGGCATTAGCATTGG
GTACTGAATTATTTTCAGTAAGAGGGAAAGAATCCATCTCCAGAATATAGAATTTTTCTTAAAA
AAAAAAAAGTATGAGAACTTAATTTGCTTTACAAGAAAAATTTTTAAAACTGTAACTTCATTTT
AAAATTGTGTATCACAACTTGGTTTATCTGCCTAAAATGATCTACTAGCTGTTGCTTATGATTA
AAAAAAAAAGCAAGTAACTGAATTATTATGGAAAACTTTAGACCTGTGGAGTGGTTTTAAATTA
CAAAAGAAGTTGGTATGATAAAGTGATGGCTTTTTTTCTTACATAAATAAAATGCAAATCAAAG
ATGTAACCAGTTGTGATTCATTGCAAGTAGTCAAGTGTCACTAACTCCTAAGGACAACCATTTG
TATCTTATAAATCAGAATTACTTATAGTTTGAAAGCACTTTGCACACAATTCTTGTATATAAAG
GATGTAATTACAGGATATAGTGGTAATGCTTTAAAACATGAACCCCATTTTAAAAATTGACAGC
TATGGTATTTTTTTAATGATCAGCTTTTTTTGTTTATTGTAAACCTAAGTTAAAAATAAAAGGT
TAATGAGAAA

hide sequence

RefSeq Acc Id:

XM_006254345 ⟹ XP_006254407

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,114,421 - 90,156,286 (+)	NCBI
mRatBN7.2	17	85,206,609 - 85,248,909 (+)	NCBI
Rnor_6.0	17	89,882,465 - 89,923,982 (-)	NCBI
Rnor_5.0	17	91,547,980 - 91,589,933 (-)	NCBI

Sequence:

show sequence

TTAAACACTAGCGGTATCCAGGGGGCACCTTTGGGACCTGGCATAGAATCCTAGCGCGTCATCA
GCCTAGCTATCCTCAGCCCGAACACAAACAAGCACTGGGTTCTCCGCAGACCGATCCCAGCCGC
AGAGCCTCGCTGCCTCTTTCCCCCTCTGAGAACGCGCAGCCGGTTCACGTCATCGCGGCGGAGC
GGGTGGGTGGGGTTTGCTGCACGGCGGCGGCAGCGGTGGAGGCTAGTGGGTCCTCCGGTGACTC
TGGGGCGGGGCTGTGGGGAGGGTGCCCACCGACTGCAGGACTTCTCAGGAATGGGGGGTGTGGC
TGGTCGACCAGCATCTTCCGGGTGGGAGAAAGGGTCCGCTATTACCGGCGGCGCAACCTCCAAG
GCCTGCTGCTAGAGATGCTCTTCCTCTCGTTTTATGCAGGCTCTTGGGAAAGCTGGATCTGCTG
CTGCTGTGTGATTCCCGTGGACAGACCTTGGGACCGGGGCCGGCGCTGGCAGCTGGAGATGGCG
GACACACGATCAGTGTATGAAACCAGGTTTGAGGCGGCCGTGAAGGTGATCCAAAGTTTGCCGA
AAAATGGATCATTCCAGCCAACGAATGAAATGATGCTCAGGTTCTACAGCTTCTACAAGCAGGC
AACTGAAGGACCCTGTAAACTCTCAAGGCCCGGGTTCTGGGATCCTATTGGAAGATATAAATGG
GATGCTTGGAGTTCCCTGGGTGATATGACTAAAGAAGAAGCCATGATTGCATATGTTGAAGAAA
TGAAAAAGATTATTGAAACTATGCCCATGACTGAGAAAGTAGAAGAGTTGCTACATGTTATAGG
TCCATTCTATGAGATTGTAGAAGACAAAAAGAACAGCAAGAGTTCTGACTTGACCTCAGATCTT
GGTAATGTTCTGACCTCTTCAAATGCCAAAGCTGTTAATGGTAAAGCAGAGAGCAGTGATAGTG
GGGCTGAGTCTGAGGAAGAAGAGGCCCAAGAAGAGTTAAAAGGAGCAGAACAGAGTGGCAGTGA
TGATAAGAAAATGATGACAAAATCAACAGATAAGAATTTGGAAATCATTGTTACCAATGGCTAT
AAAGATAGCTTTGCTCAGGACAGTGACATTCATACTGATTCTTCCCGGAGTGCCAGACGAAGTG
AAGACAAAAAGCCTACAGACCAGAGCTCTCAGCAGACAGGAAACACTGTCCTCTGCGTTCACCA
AGATACAAACGAAGACCCCGGTGAAGACGCTTCAGGAGTACATCATCTGACAAGTGACTCAGAT
AGTGAAGTATACTGTGATTCTATGGAGCAATTTGGACAAGAGGAGTATTACTTAGGTGGTGATC
CTGCTCAGCACTTGGAAGGTTCTGGTTTTTGTGAAGATGCTCAACTCTCTCCTGGGAATGGCAG
CATTGGGAAAATGCAGATGAGAGCAGTCAAGGGAAAAGGTGAAGTGAAGCACGGAGGAGAAGAT
GGCAGAAGTAGCAGTGGAACGCCGCACCGTGAGAAGAGAGGCGGAGAGAGTGAGGACATCTCCG
GTGTCAGGAGAGGGAGAGGGCATAGAATGCCACATTTGAGTGAAGGAACCAAGGGTCGGCAAGT
AGGAAGTGGAGGTGATGGAGAACGCTGGGGCTCAGACCGAGGGTCCAGAGGCAGCCTCAATGAG
CAGATCGCTCTTGTGCTCATTAGATTGCAGGAGGACATGCAGAATGTTCTTCAGAGACTTCATA
AACTGGAAACACTAACTGCTTCGCAGGCGAAATTATCATGGCAGACAAGTAATCAGCCCTCCTC
ACAGAGACCATCTTGGTGGCCCTTTGAGATGTCCCCTGGTGCATTAGCTTTTGCTATTATATGG
CCTTTTATTGCTCAGTGGTTGGTGCATTTGTATTATCAAAGAAGGAGAAGAAAACTAAATTGAA
GACATGGCCTTTTACTCAAGAAGACTGCTGGGCCTGGATGACCTAAGAGATGGATTGGAAATGA
AGTGGAATTCACAAGAAAATCTCAGTTTGTGATGATTACATTTCTTTTTTTGTCCAGTAGTTTG
GTTTATATACATAAATATTCTTTGCACTACACAAGATGATAACAATTTAAAGACTAATATTGCT
GATACTTGAAAAATCAATCTCAACTAGATTTTAAGTAGCATCCATAGACTTACTCTTTTTGAGC
TTGAAGGACTTTAAATTATTAATTATTGTTCAGTAACAATCACCTGATTTTCTCCCATAAGAAT
TATAAGCTGCATTTCTAAGGCATAGCTACAATTATGAGATAGAATTTATAATTTTTACTTTTCT
AAATTAAACACAAGAAAGAATACAAAAACAAGCGTGGCTTTTAAATGAGGCTAAATCAATTGTT
TCAGTCACTGAAGTGTCAGCCATGTAGCAGAAAACTGACGGAAGAATCCTTTACATTCTTTGTG
GTCTGTACAGAAGACTGGGCTCTATTTAGTGGCTTGATTTCCCTGGCTTGCTCAGGGGAACTCA
GAAAATCACCGCCCTTGTACTGTGTTTACTGTTTACAAACGATCCGGTGAACAGACTGGAAGAT
GGAGATGGTGAAGAATAGGCCTCATGCCAGCTCTACAGATGGTTAATCAGATTTTATCCAGCCA
CACCCACTTCATCCTCTGGAACCATTTTTTCTTTAAGTGAGGATATCTACTGTCTGCTTCATAG
GGTGCTTTGCAATAAAATGAAAACTTATTTATACTGTTTTTACTAAGGTAACAATTGCATGAAA
ATCCTTTTTTCTCCAAGTGGTAAATGACAGTCTGGATTCCTAACCTCTTAGTGCCTCAGTTTTC
CGGGGTATACTTCACAAGGTATCAGAAGTACCTTCAGTCCACAGGTCTCTACGTCCACGTGATT
AAGGAATGCCTAACTAATGGAAACTTACGTTCCTTCTAGCCATTAGAACAAAAGGAAGATTAAT
TTAGATCCTGGGAGACTATATTGAAAAATAATCTTCCTTGTGTACTTACCCAAACCTGTGCTAG
GAAATATACTTTATGCTTTGAAGATTTAACTTAAGAACTTTATAGCAAACCCTTTTCTGCTTTT
CCTTTGGAGATAGTGTTGGTAGCTCATGCCAACCCCCGGTTCACTGTGTAGTTAAAGAGGACCT
TGAACACCTGATGGTCCTGTCTCTACTGCTTTTCAGTTTCTGGGCCACAGGCATGTACCAGGGT
AGCCAGCTTGGATAGTAAAACATTTTAATTTGTTCTTGTTTTTAACGATGCTAAATGATGCTGG
GGGCATTAGCATTGGGTACTGAATTATTTTCAGTAAGAGGGAAAGAATCCATCTCCAGAATATA
GAATTTTTCTTAAAAAAAAAAAAGTATGAGAACTTAATTTGCTTTACAAGAAAAATTTTTAAAA
CTGTAACTTCATTTTAAAATTGTGTATCACAACTTGGTTTATCTGCCTAAAATGATCTACTAGC
TGTTGCTTATGATTAAAAAAAAAAGCAAGTAACTGAATTATTATGGAAAACTTTAGACCTGTGG
AGTGGTTTTAAATTACAAAAGAAGTTGGTATGATAAAGTGATGGCTTTTTTTCTTACATAAATA
AAATGCAAATCAAAGATGTAACCAGTTGTGATTCATTGCAAGTAGTCAAGTGTCACTAACTCCT
AAGGACAACCATTTGTATCTTATAAATCAGAATTACTTATAGTTTGAAAGCACTTTGCACACAA
TTCTTGTATATAAAGGATGTAATTACAGGATATAGTGGTAATGCTTTAAAACATGAACCCCATT
TTAAAAATTGACAGCTATGGTATTTTTTTAATGATCAGCTTTTTTTGTTTATTGTAAACCTAAG
TTAAAAATAAAAGGTTAATGAGAAA

hide sequence

RefSeq Acc Id:

XM_006254351 ⟹ XP_006254413

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,153 - 90,156,286 (+)	NCBI
mRatBN7.2	17	85,207,120 - 85,248,909 (+)	NCBI
Rnor_6.0	17	89,882,465 - 89,923,742 (-)	NCBI
Rnor_5.0	17	91,547,980 - 91,589,933 (-)	NCBI

Sequence:

show sequence

GGTCCTCCGGTGACTCTGGGGCGGGGCTGTGGGGAGGGTGCCCACCGACTGCAGGACTTCTCAG
GAATGGGGGGTGTGGCTGGTCGACCAGCATCTTCCGGGTGGGAGAAAGGGTCCGCTATTACCGG
CGGCGCAACCTCCAAGGCCTGCTGCTAGAGATGCTCTTCCTCTCGTTTTATGCAGGCTCTTGGG
AAAGCTGGATCTGCTGCTGCTGTGTGATTCCCGTGGACAGACCTTGGGACCGGGGCCGGCGCTG
GCAGCTGGAGATGGCGGACACACGATCAGTGTATGAAACCAGGTTTGAGGCGGCCGTGAAGGTG
ATCCAAAGTTTGCCGAAAAATGGATCATTCCAGCCAACGAATGAAATGATGCTCAGGTTCTACA
GCTTCTACAAGCAGGCAACTGAAGGACCCTGTAAACTCTCAAGGCCCGGGTTCTGGGATCCTAT
TGGAAGATATAAATGGGATGCTTGGAGTTCCCTGGGTGATATGACTAAAGAAGAAGCCATGATT
GCATATGTTGAAGAAATGAAAAAGATTATTGAAACTATGCCCATGACTGAGAAAGTAGAAGAGT
TGCTACATGTTATAGGTCCATTCTATGAGATTGTAGAAGACAAAAAGAACAGCAAGAGTTCTGA
CTTGACCTCAGTCCGATTGGAGAAAATCTCCAAATACTTAGAAGATCTTGGTAATGTTCTGACC
TCTTCAAATGCCAAAGCTGTTAATGGTAAAGCAGAGAGCAGTGATAGTGGGGCTGAGTCTGAGG
AAGAAGAGGCCCAAGAAGAGTTAAAAGGAGCAGAACAGAGTGGCAGTGATGATAAGAAAATGAT
GACAAAATCAACAGATAAGAATTTGGAAATCATTGTTACCAATGGCTATAAAGATAGCTTTGCT
CAGGACAGTGACATTCATACTGATTCTTCCCGGAGTGCCAGACGAAGTGAAGACAAAAAGCCTA
CAGACCAGAGCTCTCAGCAGACAGGAAACACTGTCCTCTGCGTTCACCAAGATACAAACGAAGA
CCCCGGTGAAGACGCTTCAGGAGTACATCATCTGACAAGTGACTCAGATAGTGAAGTATACTGT
GATTCTATGGAGCAATTTGGACAAGAGGAGTATTACTTAGGTGGTGATCCTGCTCAGCACTTGG
AAGGTTCTGGTTTTTGTGAAGATGCTCAACTCTCTCCTGGGAATGGCAGCATTGGGAAAATGCA
GATGAGAGCAGTCAAGGGAAAAGGTGAAGTGAAGCACGGAGGAGAAGATGGCAGAAGTAGCAGT
GGAACGCCGCACCGTGAGAAGAGAGGCGGAGAGAGTGAGGACATCTCCGGTGTCAGGAGAGGGA
GAGTAGGGCATAGAATGCCACATTTGAGTGAAGGAACCAAGGGTCGGCAAGTAGGAAGTGGAGG
TGATGGAGAACGCTGGGGCTCAGACCGAGGGTCCAGAGGCAGCCTCAATGAGCAGATCGCTCTT
GTGCTCATTAGATTGCAGGAGGACATGCAGAATGTTCTTCAGAGACTTCATAAACTGGAAACAC
TAACTGCTTCGCAGGCGAAATTATCATGGCAGACAAGTAATCAGCCCTCCTCACAGAGACCATC
TTGGTGGCCCTTTGAGATGTCCCCTGGTGCATTAGCTTTTGCTATTATATGGCCTTTTATTGCT
CAGTGGTTGGTGCATTTGTATTATCAAAGAAGGAGAAGAAAACTAAATTGAAGACATGGCCTTT
TACTCAAGAAGACTGCTGGGCCTGGATGACCTAAGAGATGGATTGGAAATGAAGTGGAATTCAC
AAGAAAATCTCAGTTTGTGATGATTACATTTCTTTTTTTGTCCAGTAGTTTGGTTTATATACAT
AAATATTCTTTGCACTACACAAGATGATAACAATTTAAAGACTAATATTGCTGATACTTGAAAA
ATCAATCTCAACTAGATTTTAAGTAGCATCCATAGACTTACTCTTTTTGAGCTTGAAGGACTTT
AAATTATTAATTATTGTTCAGTAACAATCACCTGATTTTCTCCCATAAGAATTATAAGCTGCAT
TTCTAAGGCATAGCTACAATTATGAGATAGAATTTATAATTTTTACTTTTCTAAATTAAACACA
AGAAAGAATACAAAAACAAGCGTGGCTTTTAAATGAGGCTAAATCAATTGTTTCAGTCACTGAA
GTGTCAGCCATGTAGCAGAAAACTGACGGAAGAATCCTTTACATTCTTTGTGGTCTGTACAGAA
GACTGGGCTCTATTTAGTGGCTTGATTTCCCTGGCTTGCTCAGGGGAACTCAGAAAATCACCGC
CCTTGTACTGTGTTTACTGTTTACAAACGATCCGGTGAACAGACTGGAAGATGGAGATGGTGAA
GAATAGGCCTCATGCCAGCTCTACAGATGGTTAATCAGATTTTATCCAGCCACACCCACTTCAT
CCTCTGGAACCATTTTTTCTTTAAGTGAGGATATCTACTGTCTGCTTCATAGGGTGCTTTGCAA
TAAAATGAAAACTTATTTATACTGTTTTTACTAAGGTAACAATTGCATGAAAATCCTTTTTTCT
CCAAGTGGTAAATGACAGTCTGGATTCCTAACCTCTTAGTGCCTCAGTTTTCCGGGGTATACTT
CACAAGGTATCAGAAGTACCTTCAGTCCACAGGTCTCTACGTCCACGTGATTAAGGAATGCCTA
ACTAATGGAAACTTACGTTCCTTCTAGCCATTAGAACAAAAGGAAGATTAATTTAGATCCTGGG
AGACTATATTGAAAAATAATCTTCCTTGTGTACTTACCCAAACCTGTGCTAGGAAATATACTTT
ATGCTTTGAAGATTTAACTTAAGAACTTTATAGCAAACCCTTTTCTGCTTTTCCTTTGGAGATA
GTGTTGGTAGCTCATGCCAACCCCCGGTTCACTGTGTAGTTAAAGAGGACCTTGAACACCTGAT
GGTCCTGTCTCTACTGCTTTTCAGTTTCTGGGCCACAGGCATGTACCAGGGTAGCCAGCTTGGA
TAGTAAAACATTTTAATTTGTTCTTGTTTTTAACGATGCTAAATGATGCTGGGGGCATTAGCAT
TGGGTACTGAATTATTTTCAGTAAGAGGGAAAGAATCCATCTCCAGAATATAGAATTTTTCTTA
AAAAAAAAAAAGTATGAGAACTTAATTTGCTTTACAAGAAAAATTTTTAAAACTGTAACTTCAT
TTTAAAATTGTGTATCACAACTTGGTTTATCTGCCTAAAATGATCTACTAGCTGTTGCTTATGA
TTAAAAAAAAAAGCAAGTAACTGAATTATTATGGAAAACTTTAGACCTGTGGAGTGGTTTTAAA
TTACAAAAGAAGTTGGTATGATAAAGTGATGGCTTTTTTTCTTACATAAATAAAATGCAAATCA
AAGATGTAACCAGTTGTGATTCATTGCAAGTAGTCAAGTGTCACTAACTCCTAAGGACAACCAT
TTGTATCTTATAAATCAGAATTACTTATAGTTTGAAAGCACTTTGCACACAATTCTTGTATATA
AAGGATGTAATTACAGGATATAGTGGTAATGCTTTAAAACATGAACCCCATTTTAAAAATTGAC
AGCTATGGTATTTTTTTAATGATCAGCTTTTTTTGTTTATTGTAAACCTAAGTTAAAAATAAAA
GGTTAATGAGAAA

hide sequence

RefSeq Acc Id:

XM_017600575 ⟹ XP_017456064

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,204 - 90,156,286 (+)	NCBI
mRatBN7.2	17	85,207,120 - 85,248,909 (+)	NCBI
Rnor_6.0	17	89,882,465 - 89,923,742 (-)	NCBI

Sequence:

show sequence

GGTCCTCCGGTGACTCTGGGGCGGGGCTGTGGGGAGGGTGCCCACCGACTGCAGGACTTCTCAG
GAATGGGGGGTGTGGCTGGTCGACCAGCATCTTCCGGGTGGGAGAAAGGGTCCGCTATTACCGG
CGGCGCAACCTCCAAGGCCTGCTGCTAGAGATGCTCTTCCTCTCGTTTTATGCAGGCTCTTGGG
AAAGCTGGATCTGCTGCTGCTGTGTGATTCCCGTGGACAGACCTTGGGACCGGGGCCGGCGCTG
GCAGCTGGAGATGGCGGACACACGATCAGTGTATGAAACCAGGTTTGAGGCGGCCGTGAAGGTG
ATCCAAAGTTTGCCGAAAAATGGATCATTCCAGCCAACGAATGAAATGATGCTCAGGTTCTACA
GCTTCTACAAGCAGGCAACTGAAGGACCCTGTAAACTCTCAAGGCCCGGGTTCTGGGATCCTAT
TGGAAGATATAAATGGGATGCTTGGAGTTCCCTGGGTGATATGACTAAAGAAGAAGCCATGATT
GCATATGTTGAAGAAATGAAAAAGATTATTGAAACTATGCCCATGACTGAGAAAGTAGAAGAGT
TGCTACATGTTATAGGTCCATTCTATGAGATTGTAGAAGACAAAAAGAACAGCAAGAGTTCTGA
CTTGACCTCAGTCCGATTGGAGAAAATCTCCAAATACTTAGAAGATCTTGGTAATGTTCTGACC
TCTTCAAATGCCAAAGCTGTTAATGGTAAAGCAGAGAGCAGTGATAGTGGGGCTGAGTCTGAGG
AAGAAGAGGCCCAAGAAGAGTTAAAAGGAGCAGAACAGAGTGGCAGTGATGATAAGAAAATGAT
GACAAAATCAACAGATAAGAATTTGGAAATCATTGTTACCAATGGCTATAAAGATAGCTTTGCT
CAGGACAGTGACATTCATACTGATTCTTCCCGGAGTGCCAGACGAAGTGAAGACAAAAAGCCTA
CAGACCAGAGCTCTCAGCAGACAGGAAACACTGTCCTCTGCGTTCACCAAGATACAAACGAAGA
CCCCGGTGAAGACGCTTCAGGAGTACATCATCTGACAAGTGACTCAGATAGTGAAGTATACTGT
GATTCTATGGAGCAATTTGGACAAGAGGAGTCTTTAGACAGCTTCATGTCAAACAATGGACACT
TTCAGTATTACTTAGGTGGTGATCCTGCTCAGCACTTGGAAGGTTCTGGTTTTTGTGAAGATGC
TCAACTCTCTCCTGGGAATGGCAGCATTGGGAAAATGCAGATGAGAGCAGTCAAGGGAAAAGGT
GAAGTGAAGCACGGAGGAGAAGATGGCAGAAGTAGCAGTGGAACGCCGCACCGTGAGAAGAGAG
GCGGAGAGAGTGAGGACATCTCCGGTGTCAGGAGAGGGAGAGGGCATAGAATGCCACATTTGAG
TGAAGGAACCAAGGGTCGGCAAGTAGGAAGTGGAGGTGATGGAGAACGCTGGGGCTCAGACCGA
GGGTCCAGAGGCAGCCTCAATGAGCAGATCGCTCTTGTGCTCATTAGATTGCAGGAGGACATGC
AGAATGTTCTTCAGAGACTTCATAAACTGGAAACACTAACTGCTTCGCAGGCGAAATTATCATG
GCAGACAAGTAATCAGCCCTCCTCACAGAGACCATCTTGGTGGCCCTTTGAGATGTCCCCTGGT
GCATTAGCTTTTGCTATTATATGGCCTTTTATTGCTCAGTGGTTGGTGCATTTGTATTATCAAA
GAAGGAGAAGAAAACTAAATTGAAGACATGGCCTTTTACTCAAGAAGACTGCTGGGCCTGGATG
ACCTAAGAGATGGATTGGAAATGAAGTGGAATTCACAAGAAAATCTCAGTTTGTGATGATTACA
TTTCTTTTTTTGTCCAGTAGTTTGGTTTATATACATAAATATTCTTTGCACTACACAAGATGAT
AACAATTTAAAGACTAATATTGCTGATACTTGAAAAATCAATCTCAACTAGATTTTAAGTAGCA
TCCATAGACTTACTCTTTTTGAGCTTGAAGGACTTTAAATTATTAATTATTGTTCAGTAACAAT
CACCTGATTTTCTCCCATAAGAATTATAAGCTGCATTTCTAAGGCATAGCTACAATTATGAGAT
AGAATTTATAATTTTTACTTTTCTAAATTAAACACAAGAAAGAATACAAAAACAAGCGTGGCTT
TTAAATGAGGCTAAATCAATTGTTTCAGTCACTGAAGTGTCAGCCATGTAGCAGAAAACTGACG
GAAGAATCCTTTACATTCTTTGTGGTCTGTACAGAAGACTGGGCTCTATTTAGTGGCTTGATTT
CCCTGGCTTGCTCAGGGGAACTCAGAAAATCACCGCCCTTGTACTGTGTTTACTGTTTACAAAC
GATCCGGTGAACAGACTGGAAGATGGAGATGGTGAAGAATAGGCCTCATGCCAGCTCTACAGAT
GGTTAATCAGATTTTATCCAGCCACACCCACTTCATCCTCTGGAACCATTTTTTCTTTAAGTGA
GGATATCTACTGTCTGCTTCATAGGGTGCTTTGCAATAAAATGAAAACTTATTTATACTGTTTT
TACTAAGGTAACAATTGCATGAAAATCCTTTTTTCTCCAAGTGGTAAATGACAGTCTGGATTCC
TAACCTCTTAGTGCCTCAGTTTTCCGGGGTATACTTCACAAGGTATCAGAAGTACCTTCAGTCC
ACAGGTCTCTACGTCCACGTGATTAAGGAATGCCTAACTAATGGAAACTTACGTTCCTTCTAGC
CATTAGAACAAAAGGAAGATTAATTTAGATCCTGGGAGACTATATTGAAAAATAATCTTCCTTG
TGTACTTACCCAAACCTGTGCTAGGAAATATACTTTATGCTTTGAAGATTTAACTTAAGAACTT
TATAGCAAACCCTTTTCTGCTTTTCCTTTGGAGATAGTGTTGGTAGCTCATGCCAACCCCCGGT
TCACTGTGTAGTTAAAGAGGACCTTGAACACCTGATGGTCCTGTCTCTACTGCTTTTCAGTTTC
TGGGCCACAGGCATGTACCAGGGTAGCCAGCTTGGATAGTAAAACATTTTAATTTGTTCTTGTT
TTTAACGATGCTAAATGATGCTGGGGGCATTAGCATTGGGTACTGAATTATTTTCAGTAAGAGG
GAAAGAATCCATCTCCAGAATATAGAATTTTTCTTAAAAAAAAAAAAGTATGAGAACTTAATTT
GCTTTACAAGAAAAATTTTTAAAACTGTAACTTCATTTTAAAATTGTGTATCACAACTTGGTTT
ATCTGCCTAAAATGATCTACTAGCTGTTGCTTATGATTAAAAAAAAAAGCAAGTAACTGAATTA
TTATGGAAAACTTTAGACCTGTGGAGTGGTTTTAAATTACAAAAGAAGTTGGTATGATAAAGTG
ATGGCTTTTTTTCTTACATAAATAAAATGCAAATCAAAGATGTAACCAGTTGTGATTCATTGCA
AGTAGTCAAGTGTCACTAACTCCTAAGGACAACCATTTGTATCTTATAAATCAGAATTACTTAT
AGTTTGAAAGCACTTTGCACACAATTCTTGTATATAAAGGATGTAATTACAGGATATAGTGGTA
ATGCTTTAAAACATGAACCCCATTTTAAAAATTGACAGCTATGGTATTTTTTTAATGATCAGCT
TTTTTTGTTTATTGTAAACCTAAGTTAAAAATAAAAGGTTAATGAGAAA

hide sequence

RefSeq Acc Id:

XM_017600577 ⟹ XP_017456066

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,153 - 90,156,286 (+)	NCBI
mRatBN7.2	17	85,207,120 - 85,248,909 (+)	NCBI
Rnor_6.0	17	89,882,465 - 89,923,742 (-)	NCBI

Sequence:

show sequence

GGTCCTCCGGTGACTCTGGGGCGGGGCTGTGGGGAGGGTGCCCACCGACTGCAGGACTTCTCAG
GAATGGGGGGTGTGGCTGGTCGACCAGCATCTTCCGGGTGGGAGAAAGGGTCCGCTATTACCGG
CGGCGCAACCTCCAAGGCCTGCTGCTAGAGATGCTCTTCCTCTCGTTTTATGCAGGCTCTTGGG
AAAGCTGGATCTGCTGCTGCTGTGTGATTCCCGTGGACAGACCTTGGGACCGGGGCCGGCGCTG
GCAGCTGGAGATGGCGGACACACGATCAGTGTATGAAACCAGGTTTGAGGCGGCCGTGAAGGTG
ATCCAAAGTTTGCCGAAAAATGGATCATTCCAGCCAACGAATGAAATGATGCTCAGGTTCTACA
GCTTCTACAAGCAGGCAACTGAAGGACCCTGTAAACTCTCAAGGCCCGGGTTCTGGGATCCTAT
TGGAAGATATAAATGGGATGCTTGGAGTTCCCTGGGTGATATGACTAAAGAAGAAGCCATGATT
GCATATGTTGAAGAAATGAAAAAGATTATTGAAACTATGCCCATGACTGAGAAAGTAGAAGAGT
TGCTACATGTTATAGGTCCATTCTATGAGATTGTAGAAGACAAAAAGAACAGCAAGAGTTCTGA
CTTGACCTCAGATCTTGGTAATGTTCTGACCTCTTCAAATGCCAAAGCTGTTAATGGTAAAGCA
GAGAGCAGTGATAGTGGGGCTGAGTCTGAGGAAGAAGAGGCCCAAGAAGAGTTAAAAGGAGCAG
AACAGAGTGGCAGTGATGATAAGAAAATGATGACAAAATCAACAGATAAGAATTTGGAAATCAT
TGTTACCAATGGCTATAAAGATAGCTTTGCTCAGGACAGTGACATTCATACTGATTCTTCCCGG
AGTGCCAGACGAAGTGAAGACAAAAAGCCTACAGACCAGAGCTCTCAGCAGACAGGAAACACTG
TCCTCTGCGTTCACCAAGATACAAACGAAGACCCCGGTGAAGACGCTTCAGGAGTACATCATCT
GACAAGTGACTCAGATAGTGAAGTATACTGTGATTCTATGGAGCAATTTGGACAAGAGGAGTCT
TTAGACAGCTTCATGTCAAACAATGGACACTTTCAGTATTACTTAGGTGGTGATCCTGCTCAGC
ACTTGGAAGGTTCTGGTTTTTGTGAAGATGCTCAACTCTCTCCTGGGAATGGCAGCATTGGGAA
AATGCAGATGAGAGCAGTCAAGGGAAAAGGTGAAGTGAAGCACGGAGGAGAAGATGGCAGAAGT
AGCAGTGGAACGCCGCACCGTGAGAAGAGAGGCGGAGAGAGTGAGGACATCTCCGGTGTCAGGA
GAGGGAGAGTAGGGCATAGAATGCCACATTTGAGTGAAGGAACCAAGGGTCGGCAAGTAGGAAG
TGGAGGTGATGGAGAACGCTGGGGCTCAGACCGAGGGTCCAGAGGCAGCCTCAATGAGCAGATC
GCTCTTGTGCTCATTAGATTGCAGGAGGACATGCAGAATGTTCTTCAGAGACTTCATAAACTGG
AAACACTAACTGCTTCGCAGGCGAAATTATCATGGCAGACAAGTAATCAGCCCTCCTCACAGAG
ACCATCTTGGTGGCCCTTTGAGATGTCCCCTGGTGCATTAGCTTTTGCTATTATATGGCCTTTT
ATTGCTCAGTGGTTGGTGCATTTGTATTATCAAAGAAGGAGAAGAAAACTAAATTGAAGACATG
GCCTTTTACTCAAGAAGACTGCTGGGCCTGGATGACCTAAGAGATGGATTGGAAATGAAGTGGA
ATTCACAAGAAAATCTCAGTTTGTGATGATTACATTTCTTTTTTTGTCCAGTAGTTTGGTTTAT
ATACATAAATATTCTTTGCACTACACAAGATGATAACAATTTAAAGACTAATATTGCTGATACT
TGAAAAATCAATCTCAACTAGATTTTAAGTAGCATCCATAGACTTACTCTTTTTGAGCTTGAAG
GACTTTAAATTATTAATTATTGTTCAGTAACAATCACCTGATTTTCTCCCATAAGAATTATAAG
CTGCATTTCTAAGGCATAGCTACAATTATGAGATAGAATTTATAATTTTTACTTTTCTAAATTA
AACACAAGAAAGAATACAAAAACAAGCGTGGCTTTTAAATGAGGCTAAATCAATTGTTTCAGTC
ACTGAAGTGTCAGCCATGTAGCAGAAAACTGACGGAAGAATCCTTTACATTCTTTGTGGTCTGT
ACAGAAGACTGGGCTCTATTTAGTGGCTTGATTTCCCTGGCTTGCTCAGGGGAACTCAGAAAAT
CACCGCCCTTGTACTGTGTTTACTGTTTACAAACGATCCGGTGAACAGACTGGAAGATGGAGAT
GGTGAAGAATAGGCCTCATGCCAGCTCTACAGATGGTTAATCAGATTTTATCCAGCCACACCCA
CTTCATCCTCTGGAACCATTTTTTCTTTAAGTGAGGATATCTACTGTCTGCTTCATAGGGTGCT
TTGCAATAAAATGAAAACTTATTTATACTGTTTTTACTAAGGTAACAATTGCATGAAAATCCTT
TTTTCTCCAAGTGGTAAATGACAGTCTGGATTCCTAACCTCTTAGTGCCTCAGTTTTCCGGGGT
ATACTTCACAAGGTATCAGAAGTACCTTCAGTCCACAGGTCTCTACGTCCACGTGATTAAGGAA
TGCCTAACTAATGGAAACTTACGTTCCTTCTAGCCATTAGAACAAAAGGAAGATTAATTTAGAT
CCTGGGAGACTATATTGAAAAATAATCTTCCTTGTGTACTTACCCAAACCTGTGCTAGGAAATA
TACTTTATGCTTTGAAGATTTAACTTAAGAACTTTATAGCAAACCCTTTTCTGCTTTTCCTTTG
GAGATAGTGTTGGTAGCTCATGCCAACCCCCGGTTCACTGTGTAGTTAAAGAGGACCTTGAACA
CCTGATGGTCCTGTCTCTACTGCTTTTCAGTTTCTGGGCCACAGGCATGTACCAGGGTAGCCAG
CTTGGATAGTAAAACATTTTAATTTGTTCTTGTTTTTAACGATGCTAAATGATGCTGGGGGCAT
TAGCATTGGGTACTGAATTATTTTCAGTAAGAGGGAAAGAATCCATCTCCAGAATATAGAATTT
TTCTTAAAAAAAAAAAAGTATGAGAACTTAATTTGCTTTACAAGAAAAATTTTTAAAACTGTAA
CTTCATTTTAAAATTGTGTATCACAACTTGGTTTATCTGCCTAAAATGATCTACTAGCTGTTGC
TTATGATTAAAAAAAAAAGCAAGTAACTGAATTATTATGGAAAACTTTAGACCTGTGGAGTGGT
TTTAAATTACAAAAGAAGTTGGTATGATAAAGTGATGGCTTTTTTTCTTACATAAATAAAATGC
AAATCAAAGATGTAACCAGTTGTGATTCATTGCAAGTAGTCAAGTGTCACTAACTCCTAAGGAC
AACCATTTGTATCTTATAAATCAGAATTACTTATAGTTTGAAAGCACTTTGCACACAATTCTTG
TATATAAAGGATGTAATTACAGGATATAGTGGTAATGCTTTAAAACATGAACCCCATTTTAAAA
ATTGACAGCTATGGTATTTTTTTAATGATCAGCTTTTTTTGTTTATTGTAAACCTAAGTTAAAA
ATAAAAGGTTAATGAGAAA

hide sequence

RefSeq Acc Id:

XM_017600579 ⟹ XP_017456068

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,204 - 90,156,286 (+)	NCBI
mRatBN7.2	17	85,207,120 - 85,248,909 (+)	NCBI
Rnor_6.0	17	89,882,465 - 89,923,742 (-)	NCBI

Sequence:

show sequence

GGTCCTCCGGTGACTCTGGGGCGGGGCTGTGGGGAGGGTGCCCACCGACTGCAGGACTTCTCAG
GAATGGGGGGTGTGGCTGGTCGACCAGCATCTTCCGGGTGGGAGAAAGGGTCCGCTATTACCGG
CGGCGCAACCTCCAAGGCCTGCTGCTAGAGATGCTCTTCCTCTCGTTTTATGCAGGCTCTTGGG
AAAGCTGGATCTGCTGCTGCTGTGTGATTCCCGTGGACAGACCTTGGGACCGGGGCCGGCGCTG
GCAGCTGGAGATGGCGGACACACGATCAGTGTATGAAACCAGGTTTGAGGCGGCCGTGAAGGTG
ATCCAAAGTTTGCCGAAAAATGGATCATTCCAGCCAACGAATGAAATGATGCTCAGGTTCTACA
GCTTCTACAAGCAGGCAACTGAAGGACCCTGTAAACTCTCAAGGCCCGGGTTCTGGGATCCTAT
TGGAAGATATAAATGGGATGCTTGGAGTTCCCTGGGTGATATGACTAAAGAAGAAGCCATGATT
GCATATGTTGAAGAAATGAAAAAGATTATTGAAACTATGCCCATGACTGAGAAAGTAGAAGAGT
TGCTACATGTTATAGGTCCATTCTATGAGATTGTAGAAGACAAAAAGAACAGCAAGAGTTCTGA
CTTGACCTCAGTCCGATTGGAGAAAATCTCCAAATACTTAGAAGATCTTGGTAATGTTCTGACC
TCTTCAAATGCCAAAGCTGTTAATGGTAAAGCAGAGAGCAGTGATAGTGGGGCTGAGTCTGAGG
AAGAAGAGGCCCAAGAAGAGTTAAAAGGAGCAGAACAGAGTGGCAGTGATGATAAGAAAATGAT
GACAAAATCAACAGATAAGAATTTGGAAATCATTGTTACCAATGGCTATAAAGATAGCTTTGCT
CAGGACAGTGACATTCATACTGATTCTTCCCGGAGTGCCAGACGAAGTGAAGACAAAAAGCCTA
CAGACCAGAGCTCTCAGCAGACAGGAAACACTGTCCTCTGCGTTCACCAAGATACAAACGAAGA
CCCCGGTGAAGACGCTTCAGGAGTACATCATCTGACAAGTGACTCAGATAGTGAAGTATACTGT
GATTCTATGGAGCAATTTGGACAAGAGGAGTCTTTAGACAGCTTCATGTCAAACAATGGACACT
TTCAGTATTACTTAGGTGGTGATCCTGCTCAGCACTTGGAAGGTTCTGGTTTTTGTGAAGATGC
TCAACTCTCTCCTGGGAATGGCAGCATTGGGAAAATGCAGATGAGAGCAGTCAAGGGAAAAGGT
GAAGTGAAGCACGGAGGAGAAGATGGCAGAAGTAGCAGTGGAACGCCGCACCGTGAGAAGAGAG
GCGGAGAGAGTGAGGACATCTCCGGTGTCAGGAGAGGGAGAGTAGGGCATAGAATGCCACATTT
GAGTGAAGGAACCAAGGGTCGGCAAGTAGGAAGTGGAGGTGATGGAGAACGCTGGGGCTCAGAC
CGAGGGTCCAGAGGCAGCCTCAATGAGCAGATCGCTCTTGTGCTCATTAGATTGCAGGAGGACA
TGCAGAATGTTCTTCAGAGACTTCATAAACTGGAAACACTAACTGCTTCGCAGGCGAAATTATC
ATGGCAGACAAGTAATCAGCCCTCCTCACAGAAAACTAAATTGAAGACATGGCCTTTTACTCAA
GAAGACTGCTGGGCCTGGATGACCTAAGAGATGGATTGGAAATGAAGTGGAATTCACAAGAAAA
TCTCAGTTTGTGATGATTACATTTCTTTTTTTGTCCAGTAGTTTGGTTTATATACATAAATATT
CTTTGCACTACACAAGATGATAACAATTTAAAGACTAATATTGCTGATACTTGAAAAATCAATC
TCAACTAGATTTTAAGTAGCATCCATAGACTTACTCTTTTTGAGCTTGAAGGACTTTAAATTAT
TAATTATTGTTCAGTAACAATCACCTGATTTTCTCCCATAAGAATTATAAGCTGCATTTCTAAG
GCATAGCTACAATTATGAGATAGAATTTATAATTTTTACTTTTCTAAATTAAACACAAGAAAGA
ATACAAAAACAAGCGTGGCTTTTAAATGAGGCTAAATCAATTGTTTCAGTCACTGAAGTGTCAG
CCATGTAGCAGAAAACTGACGGAAGAATCCTTTACATTCTTTGTGGTCTGTACAGAAGACTGGG
CTCTATTTAGTGGCTTGATTTCCCTGGCTTGCTCAGGGGAACTCAGAAAATCACCGCCCTTGTA
CTGTGTTTACTGTTTACAAACGATCCGGTGAACAGACTGGAAGATGGAGATGGTGAAGAATAGG
CCTCATGCCAGCTCTACAGATGGTTAATCAGATTTTATCCAGCCACACCCACTTCATCCTCTGG
AACCATTTTTTCTTTAAGTGAGGATATCTACTGTCTGCTTCATAGGGTGCTTTGCAATAAAATG
AAAACTTATTTATACTGTTTTTACTAAGGTAACAATTGCATGAAAATCCTTTTTTCTCCAAGTG
GTAAATGACAGTCTGGATTCCTAACCTCTTAGTGCCTCAGTTTTCCGGGGTATACTTCACAAGG
TATCAGAAGTACCTTCAGTCCACAGGTCTCTACGTCCACGTGATTAAGGAATGCCTAACTAATG
GAAACTTACGTTCCTTCTAGCCATTAGAACAAAAGGAAGATTAATTTAGATCCTGGGAGACTAT
ATTGAAAAATAATCTTCCTTGTGTACTTACCCAAACCTGTGCTAGGAAATATACTTTATGCTTT
GAAGATTTAACTTAAGAACTTTATAGCAAACCCTTTTCTGCTTTTCCTTTGGAGATAGTGTTGG
TAGCTCATGCCAACCCCCGGTTCACTGTGTAGTTAAAGAGGACCTTGAACACCTGATGGTCCTG
TCTCTACTGCTTTTCAGTTTCTGGGCCACAGGCATGTACCAGGGTAGCCAGCTTGGATAGTAAA
ACATTTTAATTTGTTCTTGTTTTTAACGATGCTAAATGATGCTGGGGGCATTAGCATTGGGTAC
TGAATTATTTTCAGTAAGAGGGAAAGAATCCATCTCCAGAATATAGAATTTTTCTTAAAAAAAA
AAAAGTATGAGAACTTAATTTGCTTTACAAGAAAAATTTTTAAAACTGTAACTTCATTTTAAAA
TTGTGTATCACAACTTGGTTTATCTGCCTAAAATGATCTACTAGCTGTTGCTTATGATTAAAAA
AAAAAGCAAGTAACTGAATTATTATGGAAAACTTTAGACCTGTGGAGTGGTTTTAAATTACAAA
AGAAGTTGGTATGATAAAGTGATGGCTTTTTTTCTTACATAAATAAAATGCAAATCAAAGATGT
AACCAGTTGTGATTCATTGCAAGTAGTCAAGTGTCACTAACTCCTAAGGACAACCATTTGTATC
TTATAAATCAGAATTACTTATAGTTTGAAAGCACTTTGCACACAATTCTTGTATATAAAGGATG
TAATTACAGGATATAGTGGTAATGCTTTAAAACATGAACCCCATTTTAAAAATTGACAGCTATG
GTATTTTTTTAATGATCAGCTTTTTTTGTTTATTGTAAACCTAAGTTAAAAATAAAAGGTTAAT
GAGAAA

hide sequence

RefSeq Acc Id:

XM_017600581 ⟹ XP_017456070

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,204 - 90,156,286 (+)	NCBI
mRatBN7.2	17	85,207,120 - 85,248,909 (+)	NCBI
Rnor_6.0	17	89,882,465 - 89,923,742 (-)	NCBI

Sequence:

show sequence

GGTCCTCCGGTGACTCTGGGGCGGGGCTGTGGGGAGGGTGCCCACCGACTGCAGGACTTCTCAG
GAATGGGGGGTGTGGCTGGTCGACCAGCATCTTCCGGGTGGGAGAAAGGGTCCGCTATTACCGG
CGGCGCAACCTCCAAGGCCTGCTGCTAGAGATGCTCTTCCTCTCGTTTTATGCAGGCTCTTGGG
AAAGCTGGATCTGCTGCTGCTGTGTGATTCCCGTGGACAGACCTTGGGACCGGGGCCGGCGCTG
GCAGCTGGAGATGGCGGACACACGATCAGTGTATGAAACCAGGTTTGAGGCGGCCGTGAAGGTG
ATCCAAAGTTTGCCGAAAAATGGATCATTCCAGCCAACGAATGAAATGATGCTCAGGTTCTACA
GCTTCTACAAGCAGGCAACTGAAGGACCCTGTAAACTCTCAAGGCCCGGGTTCTGGGATCCTAT
TGGAAGATATAAATGGGATGCTTGGAGTTCCCTGGGTGATATGACTAAAGAAGAAGCCATGATT
GCATATGTTGAAGAAATGAAAAAGATTATTGAAACTATGCCCATGACTGAGAAAGTAGAAGAGT
TGCTACATGTTATAGGTCCATTCTATGAGATTGTAGAAGACAAAAAGAACAGCAAGAGTTCTGA
CTTGACCTCAGTCCGATTGGAGAAAATCTCCAAATACTTAGAAGATCTTGGTAATGTTCTGACC
TCTTCAAATGCCAAAGCTGTTAATGGTAAAGCAGAGAGCAGTGATAGTGGGGCTGAGTCTGAGG
AAGAAGAGGCCCAAGAAGAGTTAAAAGGAGCAGAACAGAGTGGCAGTGATGATACAAACGAAGA
CCCCGGTGAAGACGCTTCAGGAGTACATCATCTGACAAGTGACTCAGATAGTGAAGTATACTGT
GATTCTATGGAGCAATTTGGACAAGAGGAGTCTTTAGACAGCTTCATGTCAAACAATGGACACT
TTCAGTATTACTTAGGTGGTGATCCTGCTCAGCACTTGGAAGGTTCTGGTTTTTGTGAAGATGC
TCAACTCTCTCCTGGGAATGGCAGCATTGGGAAAATGCAGATGAGAGCAGTCAAGGGAAAAGGT
GAAGTGAAGCACGGAGGAGAAGATGGCAGAAGTAGCAGTGGAACGCCGCACCGTGAGAAGAGAG
GCGGAGAGAGTGAGGACATCTCCGGTGTCAGGAGAGGGAGAGTAGGGCATAGAATGCCACATTT
GAGTGAAGGAACCAAGGGTCGGCAAGTAGGAAGTGGAGGTGATGGAGAACGCTGGGGCTCAGAC
CGAGGGTCCAGAGGCAGCCTCAATGAGCAGATCGCTCTTGTGCTCATTAGATTGCAGGAGGACA
TGCAGAATGTTCTTCAGAGACTTCATAAACTGGAAACACTAACTGCTTCGCAGGCGAAATTATC
ATGGCAGACAAGTAATCAGCCCTCCTCACAGAGACCATCTTGGTGGCCCTTTGAGATGTCCCCT
GGTGCATTAGCTTTTGCTATTATATGGCCTTTTATTGCTCAGTGGTTGGTGCATTTGTATTATC
AAAGAAGGAGAAGAAAACTAAATTGAAGACATGGCCTTTTACTCAAGAAGACTGCTGGGCCTGG
ATGACCTAAGAGATGGATTGGAAATGAAGTGGAATTCACAAGAAAATCTCAGTTTGTGATGATT
ACATTTCTTTTTTTGTCCAGTAGTTTGGTTTATATACATAAATATTCTTTGCACTACACAAGAT
GATAACAATTTAAAGACTAATATTGCTGATACTTGAAAAATCAATCTCAACTAGATTTTAAGTA
GCATCCATAGACTTACTCTTTTTGAGCTTGAAGGACTTTAAATTATTAATTATTGTTCAGTAAC
AATCACCTGATTTTCTCCCATAAGAATTATAAGCTGCATTTCTAAGGCATAGCTACAATTATGA
GATAGAATTTATAATTTTTACTTTTCTAAATTAAACACAAGAAAGAATACAAAAACAAGCGTGG
CTTTTAAATGAGGCTAAATCAATTGTTTCAGTCACTGAAGTGTCAGCCATGTAGCAGAAAACTG
ACGGAAGAATCCTTTACATTCTTTGTGGTCTGTACAGAAGACTGGGCTCTATTTAGTGGCTTGA
TTTCCCTGGCTTGCTCAGGGGAACTCAGAAAATCACCGCCCTTGTACTGTGTTTACTGTTTACA
AACGATCCGGTGAACAGACTGGAAGATGGAGATGGTGAAGAATAGGCCTCATGCCAGCTCTACA
GATGGTTAATCAGATTTTATCCAGCCACACCCACTTCATCCTCTGGAACCATTTTTTCTTTAAG
TGAGGATATCTACTGTCTGCTTCATAGGGTGCTTTGCAATAAAATGAAAACTTATTTATACTGT
TTTTACTAAGGTAACAATTGCATGAAAATCCTTTTTTCTCCAAGTGGTAAATGACAGTCTGGAT
TCCTAACCTCTTAGTGCCTCAGTTTTCCGGGGTATACTTCACAAGGTATCAGAAGTACCTTCAG
TCCACAGGTCTCTACGTCCACGTGATTAAGGAATGCCTAACTAATGGAAACTTACGTTCCTTCT
AGCCATTAGAACAAAAGGAAGATTAATTTAGATCCTGGGAGACTATATTGAAAAATAATCTTCC
TTGTGTACTTACCCAAACCTGTGCTAGGAAATATACTTTATGCTTTGAAGATTTAACTTAAGAA
CTTTATAGCAAACCCTTTTCTGCTTTTCCTTTGGAGATAGTGTTGGTAGCTCATGCCAACCCCC
GGTTCACTGTGTAGTTAAAGAGGACCTTGAACACCTGATGGTCCTGTCTCTACTGCTTTTCAGT
TTCTGGGCCACAGGCATGTACCAGGGTAGCCAGCTTGGATAGTAAAACATTTTAATTTGTTCTT
GTTTTTAACGATGCTAAATGATGCTGGGGGCATTAGCATTGGGTACTGAATTATTTTCAGTAAG
AGGGAAAGAATCCATCTCCAGAATATAGAATTTTTCTTAAAAAAAAAAAAGTATGAGAACTTAA
TTTGCTTTACAAGAAAAATTTTTAAAACTGTAACTTCATTTTAAAATTGTGTATCACAACTTGG
TTTATCTGCCTAAAATGATCTACTAGCTGTTGCTTATGATTAAAAAAAAAAGCAAGTAACTGAA
TTATTATGGAAAACTTTAGACCTGTGGAGTGGTTTTAAATTACAAAAGAAGTTGGTATGATAAA
GTGATGGCTTTTTTTCTTACATAAATAAAATGCAAATCAAAGATGTAACCAGTTGTGATTCATT
GCAAGTAGTCAAGTGTCACTAACTCCTAAGGACAACCATTTGTATCTTATAAATCAGAATTACT
TATAGTTTGAAAGCACTTTGCACACAATTCTTGTATATAAAGGATGTAATTACAGGATATAGTG
GTAATGCTTTAAAACATGAACCCCATTTTAAAAATTGACAGCTATGGTATTTTTTTAATGATCA
GCTTTTTTTGTTTATTGTAAACCTAAGTTAAAAATAAAAGGTTAATGAGAAA

hide sequence

RefSeq Acc Id:

XM_017600582 ⟹ XP_017456071

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,152 - 90,156,286 (+)	NCBI
mRatBN7.2	17	85,207,101 - 85,248,909 (+)	NCBI
Rnor_6.0	17	89,882,465 - 89,923,768 (-)	NCBI

Sequence:

show sequence

GGCGGCGGCAGCGGTGGAGGCTAGTGGGTCCTCCGGTGACTCTGGGGCGGGGCTGTGGGGAGGG
TGCCCACCGACTGCAGGACTTCTCAGGAATGGGGGGTGTGGCTGGTCGACCAGCATCTTCCGGG
TGGGAGAAAGGGTCCGCTATTACCGGCGGCGCAACCTCCAAGGCCTGCTGCTAGAGATGCTCTT
CCTCTCGTTTTATGCAGGCTCTTGGGAAAGCTGGATCTGCTGCTGCTGTGTGATTCCCGTGGAC
AGACCTTGGGACCGGGGCCGGCGCTGGCAGCTGGAGATGGCGGACACACGATCAGTGTATGAAA
CCAGGTTTGAGGCGGCCGTGAAGGTGATCCAAAGTTTGCCGAAAAATGGATCATTCCAGCCAAC
GAATGAAATGATGCTCAGGTTCTACAGCTTCTACAAGCAGGCAACTGAAGGACCCTGTAAACTC
TCAAGGCCCGGGTTCTGGGATCCTATTGGAAGATATAAATGGGATGCTTGGAGTTCCCTGGGTG
ATATGACTAAAGAAGAAGCCATGATTGCATATGTTGAAGAAATGAAAAAGATTATTGAAACTAT
GCCCATGACTGAGAAAGTAGAAGAGTTGCTACATGTTATAGGTCCATTCTATGAGATTGTAGAA
GACAAAAAGAACAGCAAGAGTTCTGACTTGACCTCAGTCCGATTGGAGAAAATCTCCAAATACT
TAGAAGATCTTGGTAATGTTCTGACCTCTTCAAATGCCAAAGCTGTTAATGGTAAAGCAGAGAG
CAGTGATAGTGGGGCTGAGTCTGAGGAAGAAGAGGCCCAAGAAGAGTTAAAAGGAGCAGAACAG
AGTGGCAGTGATGATAAGAAAATGATGACAAAATCAACAGATAAGAATTTGGAAATCATTGTTA
CCAATGGCTATAAAGATAGCTTTGCTCAGGACAGTGACATTCATACTGATTCTTCCCGGAGTGC
CAGACGAAGTGAAGACAAAAAGCCTACAGACCAGAGCTCTCAGCAGACAGGAAACACTGTCCTC
TGCGTTCACCAAGATACAAACGAAGACCCCGGTGAAGACGCTTCAGGAGTACATCATCTGACAA
GTGACTCAGATAGTGAAGTATACTGTGATTCTATGGAGCAATTTGGACAAGAGGAGTCTTTAGA
CAGCTTCATGTCAAACAATGGACACTTTCAGTATTACTTAGGTGGTGATCCTGCTCAGCACTTG
GAAGGTTCTGGTTTTTGTGAAGATGCTCAACTCTCTCCTGGGAATGGCAGCATTGGGAAAATGC
AGATGAGAGCAGTCAAGGGAAAAGGTGAAGTGAAGCACGGAGGAGAAGATGGCAGAAGTAGCAG
TGGAACGCCGCACCGTGAGAAGAGAGGCGGAGAGAGTGAGGACATCTCCGGTGTCAGGAGAGGG
AGAGTAGGGCATAGAATGCCACATTTGAGTGAAGGAACCAAGGGTCGGCAAGTAGGAAGTGGAG
GTGATGGAGAACGCTGGGGCTCAGACCGAGGGTCCAGAGGCAGCCTCAATGAGCAGATCGCTCT
TGTGCTCATTAGATTGCAGGAGGACATGCAGAATGTTCTTCAGAGACTTCATAAACTGGAAACA
CTAACTGCTTCGCAGGCGAAATTATCATGGCAGACAAGTAATCAGCCCTCCTCACAGAGACCAT
CTTGGTGGCCCTTTGAGATGTCCCCTGGTGCATTAGCTTTTGCTATTATATGGCCTTTTATTGC
TCAGTGGTTGGTGCATTTGTATTATCAAAGAAGGAGAAGAAAACTAAATTGAAGACATGGCCTT
TTACTCAAGAAGACTGCTGGGCCTGGATGACCTAAGAGATGGATTGGAAATGAAGTGGAATTCA
CAAGAAAATCTCAGTTTGTGATGATTACATTTCTTTTTTTGTCCAGTAGTTTGGTTTATATACA
TAAATATTCTTTGCACTACACAAGATGATAACAATTTAAAGACTAATATTGCTGATACTTGAAA
AATCAATCTCAACTAGATTTTAAGTAGCATCCATAGACTTACTCTTTTTGAGCTTGAAGGACTT
TAAATTATTAATTATTGTTCAGTAACAATCACCTGATTTTCTCCCATAAGAATTATAAGCTGCA
TTTCTAAGGCATAGCTACAATTATGAGATAGAATTTATAATTTTTACTTTTCTAAATTAAACAC
AAGAAAGAATACAAAAACAAGCGTGGCTTTTAAATGAGGCTAAATCAATTGTTTCAGTCACTGA
AGTGTCAGCCATGTAGCAGAAAACTGACGGAAGAATCCTTTACATTCTTTGTGGTCTGTACAGA
AGACTGGGCTCTATTTAGTGGCTTGATTTCCCTGGCTTGCTCAGGGGAACTCAGAAAATCACCG
CCCTTGTACTGTGTTTACTGTTTACAAACGATCCGGTGAACAGACTGGAAGATGGAGATGGTGA
AGAATAGGCCTCATGCCAGCTCTACAGATGGTTAATCAGATTTTATCCAGCCACACCCACTTCA
TCCTCTGGAACCATTTTTTCTTTAAGTGAGGATATCTACTGTCTGCTTCATAGGGTGCTTTGCA
ATAAAATGAAAACTTATTTATACTGTTTTTACTAAGGTAACAATTGCATGAAAATCCTTTTTTC
TCCAAGTGGTAAATGACAGTCTGGATTCCTAACCTCTTAGTGCCTCAGTTTTCCGGGGTATACT
TCACAAGGTATCAGAAGTACCTTCAGTCCACAGGTCTCTACGTCCACGTGATTAAGGAATGCCT
AACTAATGGAAACTTACGTTCCTTCTAGCCATTAGAACAAAAGGAAGATTAATTTAGATCCTGG
GAGACTATATTGAAAAATAATCTTCCTTGTGTACTTACCCAAACCTGTGCTAGGAAATATACTT
TATGCTTTGAAGATTTAACTTAAGAACTTTATAGCAAACCCTTTTCTGCTTTTCCTTTGGAGAT
AGTGTTGGTAGCTCATGCCAACCCCCGGTTCACTGTGTAGTTAAAGAGGACCTTGAACACCTGA
TGGTCCTGTCTCTACTGCTTTTCAGTTTCTGGGCCACAGGCATGTACCAGGGTAGCCAGCTTGG
ATAGTAAAACATTTTAATTTGTTCTTGTTTTTAACGATGCTAAATGATGCTGGGGGCATTAGCA
TTGGGTACTGAATTATTTTCAGTAAGAGGGAAAGAATCCATCTCCAGAATATAGAATTTTTCTT
AAAAAAAAAAAAGTATGAGAACTTAATTTGCTTTACAAGAAAAATTTTTAAAACTGTAACTTCA
TTTTAAAATTGTGTATCACAACTTGGTTTATCTGCCTAAAATGATCTACTAGCTGTTGCTTATG
ATTAAAAAAAAAAGCAAGTAACTGAATTATTATGGAAAACTTTAGACCTGTGGAGTGGTTTTAA
ATTACAAAAGAAGTTGGTATGATAAAGTGATGGCTTTTTTTCTTACATAAATAAAATGCAAATC
AAAGATGTAACCAGTTGTGATTCATTGCAAGTAGTCAAGTGTCACTAACTCCTAAGGACAACCA
TTTGTATCTTATAAATCAGAATTACTTATAGTTTGAAAGCACTTTGCACACAATTCTTGTATAT
AAAGGATGTAATTACAGGATATAGTGGTAATGCTTTAAAACATGAACCCCATTTTAAAAATTGA
CAGCTATGGTATTTTTTTAATGATCAGCTTTTTTTGTTTATTGTAAACCTAAGTTAAAAATAAA
AGGTTAATGAGAAA

hide sequence

RefSeq Acc Id:

XM_039095810 ⟹ XP_038951738

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,205 - 90,156,286 (+)	NCBI
mRatBN7.2	17	85,207,120 - 85,248,909 (+)	NCBI

RefSeq Acc Id:

XM_039095811 ⟹ XP_038951739

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,204 - 90,156,286 (+)	NCBI
mRatBN7.2	17	85,207,120 - 85,248,909 (+)	NCBI

RefSeq Acc Id:

XM_039095812 ⟹ XP_038951740

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,114,250 - 90,156,286 (+)	NCBI
mRatBN7.2	17	85,206,178 - 85,248,909 (+)	NCBI

RefSeq Acc Id:

XM_039095813 ⟹ XP_038951741

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,114,250 - 90,156,286 (+)	NCBI
mRatBN7.2	17	85,206,178 - 85,248,909 (+)	NCBI

RefSeq Acc Id:

XM_039095815 ⟹ XP_038951743

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,204 - 90,156,286 (+)	NCBI
mRatBN7.2	17	85,207,120 - 85,248,909 (+)	NCBI

RefSeq Acc Id:

XM_039095816 ⟹ XP_038951744

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,204 - 90,156,286 (+)	NCBI
mRatBN7.2	17	85,207,120 - 85,248,909 (+)	NCBI

RefSeq Acc Id:

XM_039095817 ⟹ XP_038951745

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,204 - 90,156,286 (+)	NCBI
mRatBN7.2	17	85,207,120 - 85,248,909 (+)	NCBI

RefSeq Acc Id:

XM_063276504 ⟹ XP_063132574

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,204 - 90,147,599 (+)	NCBI

RefSeq Acc Id:

XM_063276505 ⟹ XP_063132575

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,204 - 90,156,286 (+)	NCBI

RefSeq Acc Id:

XM_063276507 ⟹ XP_063132577

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,153 - 90,156,286 (+)	NCBI

RefSeq Acc Id:

XM_063276508 ⟹ XP_063132578

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,158 - 90,156,286 (+)	NCBI

RefSeq Acc Id:

XM_063276509 ⟹ XP_063132579

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,206 - 90,156,286 (+)	NCBI

RefSeq Acc Id:

XM_063276510 ⟹ XP_063132580

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,114,250 - 90,156,286 (+)	NCBI

RefSeq Acc Id:

XM_063276511 ⟹ XP_063132581

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,114,250 - 90,156,286 (+)	NCBI

RefSeq Acc Id:

XM_063276512 ⟹ XP_063132582

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,150 - 90,156,286 (+)	NCBI

RefSeq Acc Id:

XM_063276513 ⟹ XP_063132583

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,204 - 90,147,599 (+)	NCBI

RefSeq Acc Id:

XM_063276514 ⟹ XP_063132584

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,204 - 90,154,482 (+)	NCBI

RefSeq Acc Id:

XM_063276516 ⟹ XP_063132586

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,114,250 - 90,156,286 (+)	NCBI

RefSeq Acc Id:

XM_063276517 ⟹ XP_063132587

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,204 - 90,156,286 (+)	NCBI

RefSeq Acc Id:

XM_063276518 ⟹ XP_063132588

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,115,204 - 90,156,286 (+)	NCBI

RefSeq Acc Id:

XM_063276519 ⟹ XP_063132589

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,114,337 - 90,156,286 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001071103	(Get FASTA)	NCBI Sequence Viewer
	NP_001386183	(Get FASTA)	NCBI Sequence Viewer
	XP_006254405	(Get FASTA)	NCBI Sequence Viewer
	XP_006254407	(Get FASTA)	NCBI Sequence Viewer
	XP_006254413	(Get FASTA)	NCBI Sequence Viewer
	XP_017456064	(Get FASTA)	NCBI Sequence Viewer
	XP_017456066	(Get FASTA)	NCBI Sequence Viewer
	XP_017456068	(Get FASTA)	NCBI Sequence Viewer
	XP_017456070	(Get FASTA)	NCBI Sequence Viewer
	XP_017456071	(Get FASTA)	NCBI Sequence Viewer
	XP_038951738	(Get FASTA)	NCBI Sequence Viewer
	XP_038951739	(Get FASTA)	NCBI Sequence Viewer
	XP_038951740	(Get FASTA)	NCBI Sequence Viewer
	XP_038951741	(Get FASTA)	NCBI Sequence Viewer
	XP_038951743	(Get FASTA)	NCBI Sequence Viewer
	XP_038951744	(Get FASTA)	NCBI Sequence Viewer
	XP_038951745	(Get FASTA)	NCBI Sequence Viewer
	XP_063132574	(Get FASTA)	NCBI Sequence Viewer
	XP_063132575	(Get FASTA)	NCBI Sequence Viewer
	XP_063132577	(Get FASTA)	NCBI Sequence Viewer
	XP_063132578	(Get FASTA)	NCBI Sequence Viewer
	XP_063132579	(Get FASTA)	NCBI Sequence Viewer
	XP_063132580	(Get FASTA)	NCBI Sequence Viewer
	XP_063132581	(Get FASTA)	NCBI Sequence Viewer
	XP_063132582	(Get FASTA)	NCBI Sequence Viewer
	XP_063132583	(Get FASTA)	NCBI Sequence Viewer
	XP_063132584	(Get FASTA)	NCBI Sequence Viewer
	XP_063132586	(Get FASTA)	NCBI Sequence Viewer
	XP_063132587	(Get FASTA)	NCBI Sequence Viewer
	XP_063132588	(Get FASTA)	NCBI Sequence Viewer
	XP_063132589	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	A0FKI7	(Get FASTA)	NCBI Sequence Viewer
	AAI01875	(Get FASTA)	NCBI Sequence Viewer
	AAI60814	(Get FASTA)	NCBI Sequence Viewer
	ABK27611	(Get FASTA)	NCBI Sequence Viewer
	ABK27612	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000068154
	ENSRNOP00000068154.2
	ENSRNOP00000076762
	ENSRNOP00000092017
	ENSRNOP00000107708
	ENSRNOP00000112606

RefSeq Acc Id:	NP_001071103 ⟸ NM_001077635
- Peptide Label:	isoform 1
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADTRSVYETRFEAAVKVIQSLPKNGSFQPTNEMMLRFYSFYKQATEGPCKLSRPGFWDPIGRY KWDAWSSLGDMTKEEAMIAYVEEMKKIIETMPMTEKVEELLHVIGPFYEIVEDKKNSKSSDLTS DLGNVLTSSNAKAVNGKAESSDSGAESEEEEAQEELKGAEQSGSDDKKMMTKSTDKNLEIIVTN GYKDSFAQDSDIHTDSSRSARRSEDKKPTDQSSQQTGNTVLCVHQDTNEDPGEDASGVHHLTSD SDSEVYCDSMEQFGQEEYYLGGDPAQHLEGSGFCEDAQLSPGNGSIGKMQMRAVKGKGEVKHGG EDGRSSSGTPHREKRGGESEDISGVRRGRVGHRMPHLSEGTKGRQVGSGGDGERWGSDRGSRGS LNEQIALVLIRLQEDMQNVLQRLHKLETLTASQAKLSWQTSNQPSSQRPSWWPFEMSPGALAFA IIWPFIAQWLVHLYYQRRRRKLN hide sequence

RefSeq Acc Id:	XP_006254407 ⟸ XM_006254345
- Peptide Label:	isoform X8
- UniProtKB:	A0FKI6 (UniProtKB/Swiss-Prot), Q3T1K2 (UniProtKB/Swiss-Prot), A0FKI7 (UniProtKB/Swiss-Prot), B1H213 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLFLSFYAGSWESWICCCCVIPVDRPWDRGRRWQLEMADTRSVYETRFEAAVKVIQSLPKNGSF QPTNEMMLRFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAYVEEMKKII ETMPMTEKVEELLHVIGPFYEIVEDKKNSKSSDLTSDLGNVLTSSNAKAVNGKAESSDSGAESE EEEAQEELKGAEQSGSDDKKMMTKSTDKNLEIIVTNGYKDSFAQDSDIHTDSSRSARRSEDKKP TDQSSQQTGNTVLCVHQDTNEDPGEDASGVHHLTSDSDSEVYCDSMEQFGQEEYYLGGDPAQHL EGSGFCEDAQLSPGNGSIGKMQMRAVKGKGEVKHGGEDGRSSSGTPHREKRGGESEDISGVRRG RGHRMPHLSEGTKGRQVGSGGDGERWGSDRGSRGSLNEQIALVLIRLQEDMQNVLQRLHKLETL TASQAKLSWQTSNQPSSQRPSWWPFEMSPGALAFAIIWPFIAQWLVHLYYQRRRRKLN hide sequence

RefSeq Acc Id:	XP_006254413 ⟸ XM_006254351
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6AH07 (UniProtKB/TrEMBL), B1H213 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLFLSFYAGSWESWICCCCVIPVDRPWDRGRRWQLEMADTRSVYETRFEAAVKVIQSLPKNGSF QPTNEMMLRFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAYVEEMKKII ETMPMTEKVEELLHVIGPFYEIVEDKKNSKSSDLTSVRLEKISKYLEDLGNVLTSSNAKAVNGK AESSDSGAESEEEEAQEELKGAEQSGSDDKKMMTKSTDKNLEIIVTNGYKDSFAQDSDIHTDSS RSARRSEDKKPTDQSSQQTGNTVLCVHQDTNEDPGEDASGVHHLTSDSDSEVYCDSMEQFGQEE YYLGGDPAQHLEGSGFCEDAQLSPGNGSIGKMQMRAVKGKGEVKHGGEDGRSSSGTPHREKRGG ESEDISGVRRGRVGHRMPHLSEGTKGRQVGSGGDGERWGSDRGSRGSLNEQIALVLIRLQEDMQ NVLQRLHKLETLTASQAKLSWQTSNQPSSQRPSWWPFEMSPGALAFAIIWPFIAQWLVHLYYQR RRRKLN hide sequence

RefSeq Acc Id:	XP_006254405 ⟸ XM_006254343
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I5Y939 (UniProtKB/TrEMBL), B1H213 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLFLSFYAGSWESWICCCCVIPVDRPWDRGRRWQLEMADTRSVYETRFEAAVKVIQSLPKNGSF QPTNEMMLRFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAYVEEMKKII ETMPMTEKVEELLHVIGPFYEIVEDKKNSKSSDLTSVRLEKISKYLEDLGNVLTSSNAKAVNGK AESSDSGAESEEEEAQEELKGAEQSGSDDKKMMTKSTDKNLEIIVTNGYKDSFAQDSDIHTDSS RSARRSEDKKPTDQSSQQTGNTVLCVHQDTNEDPGEDASGVHHLTSDSDSEVYCDSMEQFGQEE YYLGGDPAQHLEGSGFCEDAQLSPGNGSIGKMQMRAVKGKGEVKHGGEDGRSSSGTPHREKRGG ESEDISGVRRGRGHRMPHLSEGTKGRQVGSGGDGERWGSDRGSRGSLNEQIALVLIRLQEDMQN VLQRLHKLETLTASQAKLSWQTSNQPSSQRPSWWPFEMSPGALAFAIIWPFIAQWLVHLYYQRR RRKLN hide sequence

RefSeq Acc Id:	XP_017456071 ⟸ XM_017600582
- Peptide Label:	isoform X20
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLFLSFYAGSWESWICCCCVIPVDRPWDRGRRWQLEMADTRSVYETRFEAAVKVIQSLPKNGSF QPTNEMMLRFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAYVEEMKKII ETMPMTEKVEELLHVIGPFYEIVEDKKNSKSSDLTSVRLEKISKYLEDLGNVLTSSNAKAVNGK AESSDSGAESEEEEAQEELKGAEQSGSDDKKMMTKSTDKNLEIIVTNGYKDSFAQDSDIHTDSS RSARRSEDKKPTDQSSQQTGNTVLCVHQDTNEDPGEDASGVHHLTSDSDSEVYCDSMEQFGQEE SLDSFMSNNGHFQYYLGGDPAQHLEGSGFCEDAQLSPGNGSIGKMQMRAVKGKGEVKHGGEDGR SSSGTPHREKRGGESEDISGVRRGRVGHRMPHLSEGTKGRQVGSGGDGERWGSDRGSRGSLNEQ IALVLIRLQEDMQNVLQRLHKLETLTASQAKLSWQTSNQPSSQRPSWWPFEMSPGALAFAIIWP FIAQWLVHLYYQRRRRKLN hide sequence

RefSeq Acc Id:	XP_017456066 ⟸ XM_017600577
- Peptide Label:	isoform X2
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLFLSFYAGSWESWICCCCVIPVDRPWDRGRRWQLEMADTRSVYETRFEAAVKVIQSLPKNGSF QPTNEMMLRFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAYVEEMKKII ETMPMTEKVEELLHVIGPFYEIVEDKKNSKSSDLTSDLGNVLTSSNAKAVNGKAESSDSGAESE EEEAQEELKGAEQSGSDDKKMMTKSTDKNLEIIVTNGYKDSFAQDSDIHTDSSRSARRSEDKKP TDQSSQQTGNTVLCVHQDTNEDPGEDASGVHHLTSDSDSEVYCDSMEQFGQEESLDSFMSNNGH FQYYLGGDPAQHLEGSGFCEDAQLSPGNGSIGKMQMRAVKGKGEVKHGGEDGRSSSGTPHREKR GGESEDISGVRRGRVGHRMPHLSEGTKGRQVGSGGDGERWGSDRGSRGSLNEQIALVLIRLQED MQNVLQRLHKLETLTASQAKLSWQTSNQPSSQRPSWWPFEMSPGALAFAIIWPFIAQWLVHLYY QRRRRKLN hide sequence

RefSeq Acc Id:	XP_017456070 ⟸ XM_017600581
- Peptide Label:	isoform X18
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLFLSFYAGSWESWICCCCVIPVDRPWDRGRRWQLEMADTRSVYETRFEAAVKVIQSLPKNGSF QPTNEMMLRFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAYVEEMKKII ETMPMTEKVEELLHVIGPFYEIVEDKKNSKSSDLTSVRLEKISKYLEDLGNVLTSSNAKAVNGK AESSDSGAESEEEEAQEELKGAEQSGSDDTNEDPGEDASGVHHLTSDSDSEVYCDSMEQFGQEE SLDSFMSNNGHFQYYLGGDPAQHLEGSGFCEDAQLSPGNGSIGKMQMRAVKGKGEVKHGGEDGR SSSGTPHREKRGGESEDISGVRRGRVGHRMPHLSEGTKGRQVGSGGDGERWGSDRGSRGSLNEQ IALVLIRLQEDMQNVLQRLHKLETLTASQAKLSWQTSNQPSSQRPSWWPFEMSPGALAFAIIWP FIAQWLVHLYYQRRRRKLN hide sequence

RefSeq Acc Id:	XP_017456064 ⟸ XM_017600575
- Peptide Label:	isoform X1
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLFLSFYAGSWESWICCCCVIPVDRPWDRGRRWQLEMADTRSVYETRFEAAVKVIQSLPKNGSF QPTNEMMLRFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAYVEEMKKII ETMPMTEKVEELLHVIGPFYEIVEDKKNSKSSDLTSVRLEKISKYLEDLGNVLTSSNAKAVNGK AESSDSGAESEEEEAQEELKGAEQSGSDDKKMMTKSTDKNLEIIVTNGYKDSFAQDSDIHTDSS RSARRSEDKKPTDQSSQQTGNTVLCVHQDTNEDPGEDASGVHHLTSDSDSEVYCDSMEQFGQEE SLDSFMSNNGHFQYYLGGDPAQHLEGSGFCEDAQLSPGNGSIGKMQMRAVKGKGEVKHGGEDGR SSSGTPHREKRGGESEDISGVRRGRGHRMPHLSEGTKGRQVGSGGDGERWGSDRGSRGSLNEQI ALVLIRLQEDMQNVLQRLHKLETLTASQAKLSWQTSNQPSSQRPSWWPFEMSPGALAFAIIWPF IAQWLVHLYYQRRRRKLN hide sequence

RefSeq Acc Id:	XP_017456068 ⟸ XM_017600579
- Peptide Label:	isoform X7
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLFLSFYAGSWESWICCCCVIPVDRPWDRGRRWQLEMADTRSVYETRFEAAVKVIQSLPKNGSF QPTNEMMLRFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAYVEEMKKII ETMPMTEKVEELLHVIGPFYEIVEDKKNSKSSDLTSVRLEKISKYLEDLGNVLTSSNAKAVNGK AESSDSGAESEEEEAQEELKGAEQSGSDDKKMMTKSTDKNLEIIVTNGYKDSFAQDSDIHTDSS RSARRSEDKKPTDQSSQQTGNTVLCVHQDTNEDPGEDASGVHHLTSDSDSEVYCDSMEQFGQEE SLDSFMSNNGHFQYYLGGDPAQHLEGSGFCEDAQLSPGNGSIGKMQMRAVKGKGEVKHGGEDGR SSSGTPHREKRGGESEDISGVRRGRVGHRMPHLSEGTKGRQVGSGGDGERWGSDRGSRGSLNEQ IALVLIRLQEDMQNVLQRLHKLETLTASQAKLSWQTSNQPSSQKTKLKTWPFTQEDCWAWMT hide sequence

Ensembl Acc Id:

ENSRNOP00000068154 ⟸ ENSRNOT00000076964

RefSeq Acc Id:	XP_038951740 ⟸ XM_039095812
- Peptide Label:	isoform X11
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038951741 ⟸ XM_039095813
- Peptide Label:	isoform X14
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038951739 ⟸ XM_039095811
- Peptide Label:	isoform X9
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038951743 ⟸ XM_039095815
- Peptide Label:	isoform X19
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038951745 ⟸ XM_039095817
- Peptide Label:	isoform X22
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038951738 ⟸ XM_039095810
- Peptide Label:	isoform X3
- UniProtKB:	A6KRZ3 (UniProtKB/TrEMBL), B1H213 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038951744 ⟸ XM_039095816
- Peptide Label:	isoform X21
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000076762 ⟸ ENSRNOT00000093822

Ensembl Acc Id:

ENSRNOP00000092017 ⟸ ENSRNOT00000104691

RefSeq Acc Id:	NP_001386183 ⟸ NM_001399254
- Peptide Label:	isoform 2
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132580 ⟸ XM_063276510
- Peptide Label:	isoform X16
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132581 ⟸ XM_063276511
- Peptide Label:	isoform X17
- UniProtKB:	A0A096MJJ6 (UniProtKB/TrEMBL), A6KRZ4 (UniProtKB/TrEMBL), B1H213 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132586 ⟸ XM_063276516
- Peptide Label:	isoform X25
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132589 ⟸ XM_063276519
- Peptide Label:	isoform X28
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132582 ⟸ XM_063276512
- Peptide Label:	isoform X23
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132577 ⟸ XM_063276507
- Peptide Label:	isoform X12
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132578 ⟸ XM_063276508
- Peptide Label:	isoform X13
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132575 ⟸ XM_063276505
- Peptide Label:	isoform X10
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132587 ⟸ XM_063276517
- Peptide Label:	isoform X26

RefSeq Acc Id:	XP_063132588 ⟸ XM_063276518
- Peptide Label:	isoform X27

RefSeq Acc Id:	XP_063132584 ⟸ XM_063276514
- Peptide Label:	isoform X24

RefSeq Acc Id:	XP_063132574 ⟸ XM_063276504
- Peptide Label:	isoform X6
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132583 ⟸ XM_063276513
- Peptide Label:	isoform X24

RefSeq Acc Id:	XP_063132579 ⟸ XM_063276509
- Peptide Label:	isoform X15
- UniProtKB:	B1H213 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000107708 ⟸ ENSRNOT00000130190

Ensembl Acc Id:

ENSRNOP00000112606 ⟸ ENSRNOT00000138217

Protein Domains

ACB

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0FKI7-F1-model_v2	AlphaFold	A0FKI7	1-506	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700616

Promoter ID:

EPDNEW_R11139

Type:

single initiation site

Name:

Acbd5_1

Description:

acyl-CoA binding domain containing 5

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	17	89,923,422 - 89,923,482	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309411	AgrOrtholog
BioCyc Gene	G2FUF-8479	BioCyc
Ensembl Genes	ENSRNOG00000017642	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000076964	ENTREZGENE
	ENSRNOT00000076964.2	UniProtKB/Swiss-Prot
	ENSRNOT00000093822	ENTREZGENE
	ENSRNOT00000104691	ENTREZGENE
	ENSRNOT00000130190	ENTREZGENE
	ENSRNOT00000138217	ENTREZGENE
Gene3D-CATH	1.20.80.10	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:5621330	IMAGE-MGC_LOAD
	IMAGE:7443405	IMAGE-MGC_LOAD
InterPro	ACBD5	UniProtKB/Swiss-Prot
	Acyl-CoA-binding_prot_CS	UniProtKB/Swiss-Prot
	Acyl-CoA-binding_protein	UniProtKB/Swiss-Prot
	Acyl-CoA-binding_sf	UniProtKB/Swiss-Prot
	FERM/acyl-CoA-bd_prot_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:307170	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:124766	IMAGE-MGC_LOAD
	MGC:187233	IMAGE-MGC_LOAD
NCBI Gene	307170	ENTREZGENE
PANTHER	ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5	UniProtKB/Swiss-Prot
	ACYL-COA-BINDING PROTEIN, ACBP	UniProtKB/Swiss-Prot
Pfam	ACBP	UniProtKB/Swiss-Prot
PhenoGen	Acbd5	PhenoGen
PIRSF	MA_DBI	UniProtKB/Swiss-Prot
PRINTS	ACOABINDINGP	UniProtKB/Swiss-Prot
PROSITE	ACB_1	UniProtKB/Swiss-Prot
	ACB_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000017642	RatGTEx
Superfamily-SCOP	SSF47027	UniProtKB/Swiss-Prot
UniProt	A0A096MJJ6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5Y939	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AH07	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0M031_RAT	UniProtKB/TrEMBL
	A0ABK0MB14_RAT	UniProtKB/TrEMBL
	A0FKI6	ENTREZGENE
	A0FKI7	ENTREZGENE
	A6KRZ3	ENTREZGENE, UniProtKB/TrEMBL
	A6KRZ4	ENTREZGENE, UniProtKB/TrEMBL
	ACBD5_RAT	UniProtKB/Swiss-Prot
	B1H213	ENTREZGENE, UniProtKB/TrEMBL
	Q3T1K2	ENTREZGENE
UniProt Secondary	A0FKI6	UniProtKB/Swiss-Prot
	Q3T1K2	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-07-28	Acbd5	acyl-CoA binding domain containing 5	Acbd5	acyl-Coenzyme A binding domain containing 5	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	Acbd5	acyl-Coenzyme A binding domain containing 5	Acbd5_predicted	acyl-Coenzyme A binding domain containing 5 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Acbd5_predicted	acyl-Coenzyme A binding domain containing 5 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM