Olfml2b (olfactomedin-like 2B) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Olfml2b (olfactomedin-like 2B) Rattus norvegicus
Analyze
Symbol: Olfml2b
Name: olfactomedin-like 2B
RGD ID: 1309257
Description: Predicted to enable extracellular matrix binding activity and identical protein binding activity. Predicted to be involved in signal transduction. Predicted to act upstream of or within extracellular matrix organization. Predicted to be located in extracellular matrix. Predicted to be active in extracellular space. Orthologous to human OLFML2B (olfactomedin like 2B); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-diaminodiphenylmethane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC304960; olfactomedin-like protein 2B
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81385,402,151 - 85,439,342 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1385,402,169 - 85,439,342 (+)EnsemblGRCr8
mRatBN7.21382,869,414 - 82,906,607 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1382,869,433 - 82,906,607 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1385,496,422 - 85,533,659 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01386,790,092 - 86,827,333 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01384,021,670 - 84,058,943 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01388,995,301 - 89,032,487 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1388,995,316 - 89,032,487 (+)Ensemblrn6Rnor6.0
Rnor_5.01393,609,892 - 93,647,084 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41386,481,620 - 86,518,793 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1382,526,459 - 82,563,632 (+)NCBICelera
RGSC_v3.11386,495,830 - 86,532,979 (+)NCBI
Cytogenetic Map13q24NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1,2-dimethylhydrazine  (EXP,ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-palmitoylglycerol  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
6-propyl-2-thiouracil  (EXP)
acrylamide  (EXP)
Aflatoxin B2 alpha  (ISO)
aldrin  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (EXP)
aristolochic acid A  (ISO)
azathioprine  (ISO)
azoxystrobin  (ISO)
benzo[a]pyrene  (ISO)
benzo[e]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chloroethene  (ISO)
clofibrate  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
deguelin  (ISO)
dibutyl phthalate  (EXP,ISO)
diclofenac  (ISO)
dimethylarsinic acid  (EXP)
endosulfan  (EXP)
ethanol  (ISO)
fenpyroximate  (ISO)
fulvestrant  (ISO)
furan  (EXP)
GSK-J4  (ISO)
methapyrilene  (ISO)
methoxychlor  (EXP)
N-nitrosodimethylamine  (EXP)
naled  (ISO)
nickel sulfate  (ISO)
nitrofen  (EXP)
okadaic acid  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
picoxystrobin  (ISO)
pirinixic acid  (ISO)
piroxicam  (ISO)
potassium chromate  (ISO)
prednisolone  (ISO)
progesterone  (ISO)
pyrimidifen  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
sodium aurothiomalate  (ISO)
sodium dichromate  (ISO)
Soman  (EXP)
sulfadimethoxine  (EXP)
sulforaphane  (ISO)
tebufenpyrad  (ISO)
tetrachloromethane  (ISO)
thifluzamide  (ISO)
thioacetamide  (EXP)
topotecan  (EXP)
trichloroethene  (EXP)
triclosan  (ISO)
triptonide  (ISO)
troglitazone  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:15836428   PMID:18757743   PMID:24006456  


Genomics

Comparative Map Data
Olfml2b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81385,402,151 - 85,439,342 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1385,402,169 - 85,439,342 (+)EnsemblGRCr8
mRatBN7.21382,869,414 - 82,906,607 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1382,869,433 - 82,906,607 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1385,496,422 - 85,533,659 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01386,790,092 - 86,827,333 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01384,021,670 - 84,058,943 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01388,995,301 - 89,032,487 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1388,995,316 - 89,032,487 (+)Ensemblrn6Rnor6.0
Rnor_5.01393,609,892 - 93,647,084 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41386,481,620 - 86,518,793 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1382,526,459 - 82,563,632 (+)NCBICelera
RGSC_v3.11386,495,830 - 86,532,979 (+)NCBI
Cytogenetic Map13q24NCBI
OLFML2B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381161,983,192 - 162,023,869 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1161,983,192 - 162,023,869 (-)Ensemblhg38GRCh38
GRCh371161,952,982 - 161,993,659 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361160,219,606 - 160,260,268 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341158,684,639 - 158,725,302NCBI
Celera1135,056,378 - 135,097,036 (-)NCBICelera
Cytogenetic Map1q23.3NCBI
HuRef1133,197,791 - 133,238,446 (-)NCBIHuRef
CHM1_11163,374,728 - 163,415,385 (-)NCBICHM1_1
T2T-CHM13v2.01161,327,500 - 161,368,171 (-)NCBIT2T-CHM13v2.0
Olfml2b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391170,472,101 - 170,510,356 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1170,472,101 - 170,510,358 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381170,644,431 - 170,682,789 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1170,644,532 - 170,682,789 (+)Ensemblmm10GRCm38
MGSCv371172,574,663 - 172,612,920 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361172,481,510 - 172,519,464 (+)NCBIMGSCv36mm8
Celera1173,088,723 - 173,127,042 (+)NCBICelera
Cytogenetic Map1H3NCBI
cM Map176.95NCBI
Olfml2b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546214,299,596 - 14,337,662 (+)Ensembl
ChiLan1.0NW_00495546214,299,919 - 14,336,576 (+)NCBIChiLan1.0ChiLan1.0
OLFML2B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2187,756,181 - 87,797,541 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1187,424,712 - 87,465,768 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01137,401,323 - 137,442,611 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11141,200,355 - 141,241,629 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1141,200,355 - 141,241,629 (-)EnsemblpanPan2panpan1.1
OLFML2B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13820,651,107 - 20,693,625 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3820,658,158 - 20,693,250 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3820,712,060 - 20,747,131 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03820,741,812 - 20,777,454 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3820,741,657 - 20,777,388 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13820,714,844 - 20,749,805 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03821,067,943 - 21,103,429 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03821,359,475 - 21,395,134 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Olfml2b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244050587,854,062 - 7,895,181 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936831169,864 - 211,315 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936831169,866 - 210,974 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
OLFML2B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl488,522,240 - 88,560,306 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1488,522,171 - 88,560,305 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2496,462,679 - 96,500,681 (+)NCBISscrofa10.2Sscrofa10.2susScr3
OLFML2B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1202,053,696 - 2,094,142 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl202,053,852 - 2,094,126 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660381,092,228 - 1,133,102 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Olfml2b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624826440,026 - 478,037 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_004624826440,584 - 477,986 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Olfml2b
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11049,842,818 - 49,879,992 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Olfml2b
119 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:380
Count of miRNA genes:212
Interacting mature miRNAs:260
Transcripts:ENSRNOT00000004117
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134863963493639634Rat
10755495Bp387Blood pressure QTL 3873.78arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133721624190057603Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1338975045103588154Rat
8655951Rf63Renal function QTL 6312.2blood urea nitrogen amount (VT:0005265)plasma urea nitrogen level (CMO:0000586)1371610804109350286Rat
4889606Gluco63Glucose level QTL 632.860.003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1383286150109350286Rat
8655945Rf61Renal function QTL 613.6blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)137161080489333251Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134874981487285480Rat
1331783Bp221Blood pressure QTL 2213.72886arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)137161080489333251Rat
8655959Pur32Proteinuria QTL 328.4urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)137298450699745408Rat
1300166Kidm6Kidney mass QTL 63.93kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)137161080489333251Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1367635937109350286Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13742179187286911Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)134098358585983585Rat
724564Uae11Urinary albumin excretion QTL 115.7urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)134735425894285672Rat
738027Lnnr6Liver neoplastic nodule remodeling QTL 63.3liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)1365613454109350286Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1321120177109350286Rat
7387280Uae43Urinary albumin excretion QTL 435.690.4174urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1368983334109350286Rat
738026Lnnr5Liver neoplastic nodule remodeling QTL 53.29liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)136242459288113509Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1367635937109350286Rat
1576318Schws5Schwannoma susceptibility QTL 50.0351nervous system integrity trait (VT:0010566)post-insult time to trigeminal nerve neurilemmoma formation (CMO:0002019)1364497900109350286Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1311081740103588154Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1364375743109350286Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131103588154Rat
2293341Glom15Glomerulus QTL 159.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1367635937109350286Rat

Markers in Region
RH136854  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21382,906,371 - 82,906,526 (+)MAPPERmRatBN7.2
Rnor_6.01389,032,252 - 89,032,406NCBIRnor6.0
Rnor_5.01393,646,849 - 93,647,003UniSTSRnor5.0
RGSC_v3.41386,518,558 - 86,518,712UniSTSRGSC3.4
Celera1382,563,397 - 82,563,551UniSTS
RH 3.4 Map13549.8UniSTS
Cytogenetic Map13q24UniSTS
RH137950  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21382,899,644 - 82,899,786 (+)MAPPERmRatBN7.2
Rnor_6.01389,025,525 - 89,025,666NCBIRnor6.0
Rnor_5.01393,640,122 - 93,640,263UniSTSRnor5.0
RGSC_v3.41386,511,831 - 86,511,972UniSTSRGSC3.4
Celera1382,556,670 - 82,556,811UniSTS
RH 3.4 Map13547.5UniSTS
Cytogenetic Map13q24UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 162 91 90 59 36 59 6 293 136 11 141 74 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000004117   ⟹   ENSRNOP00000004117
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1385,402,169 - 85,439,342 (+)Ensembl
mRatBN7.2 Ensembl1382,869,433 - 82,906,607 (+)Ensembl
Rnor_6.0 Ensembl1388,995,316 - 89,032,487 (+)Ensembl
RefSeq Acc Id: NM_001107195   ⟹   NP_001100665
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81385,402,169 - 85,439,342 (+)NCBI
mRatBN7.21382,869,433 - 82,906,607 (+)NCBI
Rnor_6.01388,995,316 - 89,032,487 (+)NCBI
Rnor_5.01393,609,892 - 93,647,084 (+)NCBI
RGSC_v3.41386,481,620 - 86,518,793 (+)RGD
Celera1382,526,459 - 82,563,632 (+)RGD
Sequence:
RefSeq Acc Id: XM_006250219   ⟹   XP_006250281
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81385,402,151 - 85,439,337 (+)NCBI
mRatBN7.21382,869,414 - 82,906,596 (+)NCBI
Rnor_6.01388,995,301 - 89,032,487 (+)NCBI
Rnor_5.01393,609,892 - 93,647,084 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001100665 (Get FASTA)   NCBI Sequence Viewer  
  XP_006250281 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM09247 (Get FASTA)   NCBI Sequence Viewer  
  EDM09248 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000004117
  ENSRNOP00000004117.5
RefSeq Acc Id: NP_001100665   ⟸   NM_001107195
- Peptide Label: precursor
- UniProtKB: A6IDP9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006250281   ⟸   XM_006250219
- Peptide Label: isoform X1
- UniProtKB: D4A0J7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000004117   ⟸   ENSRNOT00000004117
Protein Domains
Olfactomedin-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A0J7-F1-model_v2 AlphaFold D4A0J7 1-746 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698986
Promoter ID:EPDNEW_R9511
Type:initiation region
Name:Olfml2b_1
Description:olfactomedin-like 2B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01388,995,349 - 88,995,409EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309257 AgrOrtholog
BioCyc Gene G2FUF-17472 BioCyc
Ensembl Genes ENSRNOG00000003018 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000004117 ENTREZGENE
  ENSRNOT00000004117.7 UniProtKB/TrEMBL
InterPro Olfac-like UniProtKB/TrEMBL
  Olfactomedin-like_domain UniProtKB/TrEMBL
KEGG Report rno:304960 UniProtKB/TrEMBL
NCBI Gene 304960 ENTREZGENE
PANTHER OLFACTOMEDIN-RELATED UniProtKB/TrEMBL
  PTHR23192:SF37 UniProtKB/TrEMBL
Pfam OLF UniProtKB/TrEMBL
PhenoGen Olfml2b PhenoGen
PROSITE OLF UniProtKB/TrEMBL
RatGTEx ENSRNOG00000003018 RatGTEx
SMART OLF UniProtKB/TrEMBL
UniProt A6IDP9 ENTREZGENE, UniProtKB/TrEMBL
  D4A0J7 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Olfml2b  olfactomedin-like 2B   Olfml2b_predicted  olfactomedin-like 2B (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Olfml2b_predicted  olfactomedin-like 2B (predicted)      Symbol and Name status set to approved 70820 APPROVED