Asb8 (ankyrin repeat and SOCS box-containing 8) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Asb8 (ankyrin repeat and SOCS box-containing 8) Rattus norvegicus
Analyze
Symbol: Asb8
Name: ankyrin repeat and SOCS box-containing 8
RGD ID: 1309246
Description: Predicted to be involved in intracellular signal transduction and protein ubiquitination. Predicted to be located in cytoplasm. Orthologous to human ASB8 (ankyrin repeat and SOCS box containing 8); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; diuron.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ankyrin repeat and SOCS box protein 8; ankyrin repeat and SOCS box-containing protein 8; LOC315287
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87131,140,455 - 131,176,648 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl7131,141,406 - 131,150,633 (-)EnsemblGRCr8
mRatBN7.27129,261,397 - 129,297,492 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7129,261,397 - 129,297,485 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx7131,058,093 - 131,065,688 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07133,283,634 - 133,291,229 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07133,196,105 - 133,203,700 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.07139,724,337 - 139,760,410 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7139,724,346 - 139,734,568 (-)Ensemblrn6Rnor6.0
Rnor_5.07138,859,481 - 138,869,943 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.47136,848,245 - 136,855,784 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7125,753,211 - 125,760,752 (-)NCBICelera
RGSC_v3.17136,924,681 - 136,934,885 (-)NCBI
Cytogenetic Map7q36NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932  


Genomics

Comparative Map Data
Asb8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87131,140,455 - 131,176,648 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl7131,141,406 - 131,150,633 (-)EnsemblGRCr8
mRatBN7.27129,261,397 - 129,297,492 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7129,261,397 - 129,297,485 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx7131,058,093 - 131,065,688 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07133,283,634 - 133,291,229 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07133,196,105 - 133,203,700 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.07139,724,337 - 139,760,410 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7139,724,346 - 139,734,568 (-)Ensemblrn6Rnor6.0
Rnor_5.07138,859,481 - 138,869,943 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.47136,848,245 - 136,855,784 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7125,753,211 - 125,760,752 (-)NCBICelera
RGSC_v3.17136,924,681 - 136,934,885 (-)NCBI
Cytogenetic Map7q36NCBI
ASB8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381248,147,789 - 48,157,515 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1248,147,789 - 48,181,213 (-)Ensemblhg38GRCh38
GRCh371248,541,572 - 48,551,298 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361246,827,839 - 46,837,644 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341246,827,840 - 46,837,644NCBI
Celera1247,339,076 - 47,348,938 (-)NCBICelera
Cytogenetic Map12q13.11NCBI
HuRef1245,573,053 - 45,582,734 (-)NCBIHuRef
CHM1_11248,507,009 - 48,516,816 (-)NCBICHM1_1
T2T-CHM13v2.01248,109,134 - 48,118,862 (-)NCBIT2T-CHM13v2.0
Asb8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391598,032,518 - 98,063,476 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1598,032,518 - 98,063,506 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381598,134,637 - 98,165,596 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1598,134,637 - 98,165,625 (-)Ensemblmm10GRCm38
MGSCv371597,965,071 - 97,996,009 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361597,962,674 - 97,973,678 (-)NCBIMGSCv36mm8
Celera15100,264,279 - 100,294,933 (-)NCBICelera
Cytogenetic Map15F1NCBI
cM Map1554.13NCBI
Asb8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555007,021,895 - 7,049,424 (-)Ensembl
ChiLan1.0NW_0049555007,021,895 - 7,051,459 (-)NCBIChiLan1.0ChiLan1.0
ASB8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21045,860,597 - 46,017,000 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11245,857,358 - 46,013,758 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01240,572,795 - 40,582,635 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11241,448,039 - 41,457,662 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1241,448,039 - 41,457,662 (+)EnsemblpanPan2panpan1.1
ASB8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1276,586,933 - 6,619,240 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl276,610,633 - 6,619,089 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2739,687,518 - 39,695,739 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0276,654,449 - 6,686,775 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl276,678,518 - 6,686,757 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1276,591,903 - 6,624,300 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0276,626,671 - 6,659,077 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02739,976,130 - 39,984,347 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Asb8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494567,078,283 - 67,130,344 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365126,033,966 - 6,042,872 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365126,034,469 - 6,042,827 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ASB8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl578,526,105 - 78,534,474 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1578,526,105 - 78,534,810 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2581,696,303 - 81,728,537 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ASB8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11144,381,134 - 44,387,791 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1144,381,466 - 44,388,071 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666037201,990,625 - 201,998,466 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Asb8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248164,121,562 - 4,131,713 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248164,121,554 - 4,130,034 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Asb8
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11270,946,122 - 270,956,650 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Asb8
242 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:460
Count of miRNA genes:250
Interacting mature miRNAs:290
Transcripts:ENSRNOT00000013704
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631529Tls2T-lymphoma susceptibility QTL 200.001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)782111382132099989Rat
1354582Stl11Serum triglyceride level QTL 113.42blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)7121393075137014596Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)798549867137014596Rat
1300112Bp183Blood pressure QTL 1833.51arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)7119280025135560836Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7104186212135371468Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)793302009131686183Rat
1331748Bp215Blood pressure QTL 2154.043arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7110725024135371468Rat
61428Scl3Serum cholesterol level QTL 33.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)7100548246137014596Rat
61397Bw17Body weight QTL 176.3body mass (VT:0001259)body weight (CMO:0000012)795485047137014596Rat
1331746Kidm9Kidney mass QTL 93.934kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)782111245134948181Rat
1358914Bp266Blood pressure QTL 266arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7115313999136544683Rat
2299163Iddm34Insulin dependent diabetes mellitus QTL 342.71blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)7116269196132020414Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)792362341137014596Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)771827901136544683Rat

Markers in Region
RH131407  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27129,261,493 - 129,261,703 (+)MAPPERmRatBN7.2
Rnor_6.07139,724,434 - 139,724,643NCBIRnor6.0
Rnor_5.07138,859,578 - 138,859,787UniSTSRnor5.0
RGSC_v3.47136,848,342 - 136,848,551UniSTSRGSC3.4
Celera7125,753,308 - 125,753,517UniSTS
RH 3.4 Map71088.4UniSTS
Cytogenetic Map7q36UniSTS
RH138842  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27129,268,222 - 129,268,359 (+)MAPPERmRatBN7.2
Rnor_6.07139,731,163 - 139,731,299NCBIRnor6.0
Rnor_5.07138,866,510 - 138,866,646UniSTSRnor5.0
RGSC_v3.47136,855,071 - 136,855,207UniSTSRGSC3.4
Celera7125,760,039 - 125,760,175UniSTS
RH 3.4 Map71088.3UniSTS
Cytogenetic Map7q36UniSTS
BF416235  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27129,270,727 - 129,270,974 (+)MAPPERmRatBN7.2
Rnor_6.07139,733,667 - 139,733,913NCBIRnor6.0
Rnor_5.07138,869,014 - 138,869,260UniSTSRnor5.0
RGSC_v3.47136,857,575 - 136,857,821UniSTSRGSC3.4
Celera7125,762,540 - 125,762,786UniSTS
RH 3.4 Map71088.7UniSTS
Cytogenetic Map7q36UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 163 91 90 59 92 59 6 356 192 11 142 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001108109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001434706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001434707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001434708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001434709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001434710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006242328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006242329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC110306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC168888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ231793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ232265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000013704   ⟹   ENSRNOP00000013704
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7129,261,397 - 129,271,654 (-)Ensembl
Rnor_6.0 Ensembl7139,724,346 - 139,731,876 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000079377   ⟹   ENSRNOP00000069835
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7129,261,397 - 129,297,485 (-)Ensembl
Rnor_6.0 Ensembl7139,725,430 - 139,734,568 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000139898   ⟹   ENSRNOP00000102472
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7131,141,406 - 131,150,633 (-)Ensembl
RefSeq Acc Id: NM_001108109   ⟹   NP_001101579
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87131,140,455 - 131,147,994 (-)NCBI
mRatBN7.27129,261,397 - 129,268,936 (-)NCBI
Rnor_6.07139,724,337 - 139,731,876 (-)NCBI
Rnor_5.07138,859,481 - 138,869,943 (-)NCBI
RGSC_v3.47136,848,245 - 136,855,784 (-)RGD
Celera7125,753,211 - 125,760,752 (-)RGD
Sequence:
RefSeq Acc Id: XM_006242328   ⟹   XP_006242390
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87131,140,455 - 131,150,759 (-)NCBI
mRatBN7.27129,261,397 - 129,271,698 (-)NCBI
Rnor_6.07139,724,337 - 139,734,597 (-)NCBI
Rnor_5.07138,859,481 - 138,869,943 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006242329   ⟹   XP_006242391
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87131,140,455 - 131,150,755 (-)NCBI
mRatBN7.27129,261,397 - 129,271,698 (-)NCBI
Rnor_6.07139,724,337 - 139,734,596 (-)NCBI
Rnor_5.07138,859,481 - 138,869,943 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017594889   ⟹   XP_017450378
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87131,140,455 - 131,176,648 (-)NCBI
mRatBN7.27129,261,397 - 129,297,492 (-)NCBI
Rnor_6.07139,724,337 - 139,760,410 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017594890   ⟹   XP_017450379
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87131,140,455 - 131,150,675 (-)NCBI
mRatBN7.27129,261,397 - 129,271,671 (-)NCBI
Rnor_6.07139,724,337 - 139,734,593 (-)NCBI
Sequence:
RefSeq Acc Id: XM_063263669   ⟹   XP_063119739
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87131,140,455 - 131,150,656 (-)NCBI
RefSeq Acc Id: NP_001101579   ⟸   NM_001108109
- UniProtKB: B5DF17 (UniProtKB/TrEMBL),   F7F2V9 (UniProtKB/TrEMBL),   A0A0G2JWD3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006242390   ⟸   XM_006242328
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006242391   ⟸   XM_006242329
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017450378   ⟸   XM_017594889
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017450379   ⟸   XM_017594890
- Peptide Label: isoform X3
- Sequence:
Ensembl Acc Id: ENSRNOP00000069835   ⟸   ENSRNOT00000079377
Ensembl Acc Id: ENSRNOP00000013704   ⟸   ENSRNOT00000013704
RefSeq Acc Id: XP_063119739   ⟸   XM_063263669
- Peptide Label: isoform X2
- UniProtKB: A0A0G2JWD3 (UniProtKB/TrEMBL),   B5DF17 (UniProtKB/TrEMBL),   F7F2V9 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000102472   ⟸   ENSRNOT00000139898
Protein Domains
SOCS box

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B5DF17-F1-model_v2 AlphaFold B5DF17 1-288 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695634
Promoter ID:EPDNEW_R6147
Type:initiation region
Name:Asb8_1
Description:ankyrin repeat and SOCS box-containing 8
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.07139,734,543 - 139,734,603EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309246 AgrOrtholog
BioCyc Gene G2FUF-32158 BioCyc
Ensembl Genes ENSRNOG00000010099 Ensembl
  ENSRNOG00000075267 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000139898 ENTREZGENE
  ENSRNOT00000139898.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
  SOCS box UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  ASB8_SOCS UniProtKB/TrEMBL
  SOCS_box_dom_like UniProtKB/TrEMBL
  SOCS_C UniProtKB/TrEMBL
KEGG Report rno:315287 UniProtKB/TrEMBL
NCBI Gene 315287 ENTREZGENE
PANTHER ANKYRIN REPEAT AND SOCS BOX PROTEIN 8 UniProtKB/TrEMBL
  ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043 UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
  Ank_4 UniProtKB/TrEMBL
  SOCS_box UniProtKB/TrEMBL
PhenoGen Asb8 PhenoGen
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
  SOCS UniProtKB/TrEMBL
RatGTEx ENSRNOG00000010099 RatGTEx
  ENSRNOG00000075267 RatGTEx
SMART ANK UniProtKB/TrEMBL
  SOCS_box UniProtKB/TrEMBL
Superfamily-SCOP ANK UniProtKB/TrEMBL
  SSF158235 UniProtKB/TrEMBL
UniProt A0A0G2JWD3 ENTREZGENE
  A0ABK0LDV0_RAT UniProtKB/TrEMBL
  B5DF17 ENTREZGENE
  F7F2V9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2010-04-20 Asb8  ankyrin repeat and SOCS box-containing 8  Asb8  ankyrin repeat and SOCS box-containing protein 8  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Asb8  ankyrin repeat and SOCS box-containing protein 8   Asb8_predicted  ankyrin repeat and SOCS box-containing protein 8 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Asb8_predicted  ankyrin repeat and SOCS box-containing protein 8 (predicted)      Symbol and Name status set to approved 70820 APPROVED