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Gene: Kansl3 (KAT8 regulatory NSL complex subunit 3) Rattus norvegicus

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Symbol:

Kansl3

Name:

KAT8 regulatory NSL complex subunit 3

RGD ID:

1309220

Description:

Predicted to be involved in positive regulation of transcription by RNA polymerase II and regulation of mitochondrial transcription. Predicted to be located in mitochondrion. Predicted to be part of NSL complex. Orthologous to human KANSL3 (KAT8 regulatory NSL complex subunit 3); INTERACTS WITH 17beta-estradiol; bisphenol A; C60 fullerene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

hypothetical protein LOC316328; LOC316328; non-specific lethal 3 homolog; NSL complex protein NSL3; RGD1309220; similar to RIKEN cDNA 4632411B12; uncharacterized protein KIAA1310 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	KANSL3 (KAT8 regulatory NSL complex subunit 3)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Kansl3 (KAT8 regulatory NSL complex subunit 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Kansl3 (KAT8 regulatory NSL complex subunit 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	KANSL3 (KAT8 regulatory NSL complex subunit 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	KANSL3 (KAT8 regulatory NSL complex subunit 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Kansl3 (KAT8 regulatory NSL complex subunit 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	KANSL3 (KAT8 regulatory NSL complex subunit 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	KANSL3 (KAT8 regulatory NSL complex subunit 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Kansl3 (KAT8 regulatory NSL complex subunit 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Kansl3 (KAT8 regulatory NSL complex subunit 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Kansl3 (KAT8 regulatory NSL complex subunit 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Kansl3 (KAT8 regulatory NSL complex subunit 3)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	KANSL3 (KAT8 regulatory NSL complex subunit 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	KANSL3 (KAT8 regulatory NSL complex subunit 3)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	kansl3 (KAT8 regulatory NSL complex subunit 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	kansl3 (KAT8 regulatory NSL complex subunit 3)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Rcd1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Rcd1	Alliance	DIOPT (Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	sumv-2	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	sumv-2	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	kansl3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	kansl3	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	46,058,070 - 46,101,643 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	46,058,071 - 46,101,521 (-)	Ensembl				GRCr8
mRatBN7.2	9	38,562,170 - 38,605,757 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	38,562,177 - 38,605,692 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	47,073,701 - 47,109,064 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	52,180,982 - 52,224,437 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	50,462,870 - 50,506,327 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	42,899,432 - 42,943,224 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	42,899,432 - 42,943,198 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	42,553,536 - 42,597,088 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	35,259,028 - 35,303,816 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	36,330,073 - 36,372,844 (-)	NCBI		Celera
RGSC_v3.1	9	35,262,122 - 35,305,243 (-)	NCBI
Cytogenetic Map	9	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

all-trans-retinoic acid (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

C60 fullerene (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

copper atom (EXP)

copper(0) (EXP)

coumarin (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

dicrotophos (ISO)

diethylstilbestrol (EXP)

epoxiconazole (ISO)

FR900359 (ISO)

fulvestrant (ISO)

gentamycin (EXP)

indometacin (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

paracetamol (EXP,ISO)

perfluorohexanesulfonic acid (ISO)

perfluorononanoic acid (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

troglitazone (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chromatin organization (IEA)

positive regulation of transcription by RNA polymerase II (IBA)

regulation of mitochondrial transcription (IEA,ISO,ISS)

Cellular Component

histone acetyltransferase complex (IEA,ISO,ISS)

microtubule (IEA)

mitochondrion (IEA,ISO,ISS)

NSL complex (IBA,IEA,ISO,ISS)

nucleoplasm (IEA,ISO)

nucleus (IEA)

spindle pole (IEA)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:20018852

Genomics

Comparative Map Data

Kansl3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	46,058,070 - 46,101,643 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	46,058,071 - 46,101,521 (-)	Ensembl				GRCr8
mRatBN7.2	9	38,562,170 - 38,605,757 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	38,562,177 - 38,605,692 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	47,073,701 - 47,109,064 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	52,180,982 - 52,224,437 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	50,462,870 - 50,506,327 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	42,899,432 - 42,943,224 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	42,899,432 - 42,943,198 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	42,553,536 - 42,597,088 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	35,259,028 - 35,303,816 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	36,330,073 - 36,372,844 (-)	NCBI		Celera
RGSC_v3.1	9	35,262,122 - 35,305,243 (-)	NCBI
Cytogenetic Map	9	q21	NCBI

KANSL3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	96,580,494 - 96,638,312 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	96,593,170 - 96,642,787 (-)	Ensembl			hg38	GRCh38
GRCh37	2	97,258,909 - 97,304,049 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	96,622,638 - 96,667,810 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	2	91,700,119 - 91,745,338 (-)	NCBI		Celera
Cytogenetic Map	2	q11.2	ENTREZGENE
HuRef	2	91,220,668 - 91,265,910 (-)	NCBI		HuRef
CHM1_1	2	97,263,720 - 97,308,936 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	97,089,017 - 97,144,959 (-)	NCBI		T2T-CHM13v2.0

Kansl3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	36,374,811 - 36,408,276 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	36,374,811 - 36,408,262 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	36,335,730 - 36,369,193 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	36,335,730 - 36,369,181 (-)	Ensembl			mm10	GRCm38
MGSCv37	1	36,392,575 - 36,426,026 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	36,280,276 - 36,313,727 (-)	NCBI		MGSCv36	mm8
Celera	1	36,122,543 - 36,155,966 (-)	NCBI		Celera
Cytogenetic Map	1	B	NCBI
cM Map	1	15.22	NCBI

Kansl3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955470	3,987,816 - 4,036,656 (-)	Ensembl
ChiLan1.0 Ensembl	NW_004955470	3,976,915 - 4,036,656 (-)	Ensembl
ChiLan1.0	NW_004955470	3,976,094 - 4,036,656 (-)	NCBI	ChiLan1.0	ChiLan1.0

KANSL3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	31,667,047 - 31,714,189 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	31,669,790 - 31,716,951 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	102,675,259 - 102,720,426 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	97,517,112 - 97,562,253 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	97,522,746 - 97,561,016 (-)	Ensembl			panPan2	panpan1.1

KANSL3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	45,315,919 - 45,359,677 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	45,317,089 - 45,357,658 (+)	Ensembl			canFam3	CanFam3.1
ROS_Cfam_1.0	10	46,192,034 - 46,235,822 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	46,192,111 - 46,236,275 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	45,901,721 - 45,945,247 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	46,190,006 - 46,233,563 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	46,373,935 - 46,417,751 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Kansl3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	83,315,292 - 83,353,712 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936744	566,956 - 606,661 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936744	565,950 - 606,654 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KANSL3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	56,959,110 - 57,005,310 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	3	56,959,183 - 57,011,242 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

KANSL3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	925,096 - 971,817 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	924,830 - 970,294 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666041	168,312,292 - 168,401,618 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Kansl3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624749	2,526,753 - 2,566,289 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624749	2,526,753 - 2,566,572 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Kansl3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	112,553,346 - 112,586,593 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Kansl3
200 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	801
Count of miRNA genes:	298
Interacting mature miRNAs:	386
Transcripts:	ENSRNOT00000020955
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2303170	Bp332	Blood pressure QTL 332	3.73	0.027	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	6714888	84474983	Rat
631211	Bw4	Body weight QTL4	5.31		retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	9	5346479	50346479	Rat
7411571	Bw138	Body weight QTL 138	14.3	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	9	40029925	85029925	Rat
2303559	Gluco54	Glucose level QTL 54	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	9	8750492	53750492	Rat
1300180	Bw14	Body weight QTL 14	3.776		body mass (VT:0001259)	body weight (CMO:0000012)	9	31250432	68875676	Rat
8662828	Vetf6	Vascular elastic tissue fragility QTL 6	3.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	9	44458256	99506504	Rat
61450	Ciaa3	CIA Autoantibody QTL 3	6.5		blood autoantibody amount (VT:0003725)	calculated serum anti-type 2 collagen antibody titer (CMO:0001279)	9	29567664	74567664	Rat
1598834	Memor11	Memory QTL 11	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	9	44458256	85262605	Rat
70186	Niddm26	Non-insulin dependent diabetes mellitus QTL 26	3.87		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	9	29567664	83835942	Rat
70218	Cm28	Cardiac mass QTL 28	8.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	41720295	86720295	Rat
1641911	Alcrsp13	Alcohol response QTL 13			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	6214995	51214995	Rat
1354650	Despr5	Despair related QTL 5	4.01	0.0017	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	9	8750492	53750492	Rat
2290450	Scl57	Serum cholesterol level QTL 57	4.15		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	9	44458256	121768150	Rat
7207805	Bmd88	Bone mineral density QTL 88	4		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	9	31250432	65651574	Rat
61425	Cia15	Collagen induced arthritis QTL 15	4.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	9	5346479	50416711	Rat
1581517	Bp284	Blood pressure QTL 284			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	39220186	84220186	Rat
1600365	Mcs20	Mammary carcinoma susceptibility QTL 20	3		mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	9	21031430	49025574	Rat
7411656	Foco26	Food consumption QTL 26	9.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	40029925	85029925	Rat
1298088	Edpm11	Estrogen-dependent pituitary mass QTL 11	2.5		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	9	6214995	51214995	Rat
1641894	Alcrsp12	Alcohol response QTL 12			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	34960590	79960590	Rat
1598823	Memor16	Memory QTL 16	1.9		exploratory behavior trait (VT:0010471)	difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	9	31456061	57460683	Rat

Markers in Region

D9Got44

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	104,935,118 - 104,935,281 (+)	MAPPER	mRatBN7.2
mRatBN7.2	9	38,575,505 - 38,575,638 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	42,913,026 - 42,913,158	NCBI	Rnor6.0
Rnor_6.0	2	107,365,293 - 107,365,453	NCBI	Rnor6.0
Rnor_5.0	9	42,566,905 - 42,567,037	UniSTS	Rnor5.0
Rnor_5.0	2	127,099,798 - 127,099,958	UniSTS	Rnor5.0
RGSC_v3.4	9	35,273,691 - 35,273,823	UniSTS	RGSC3.4
RGSC_v3.4	2	107,694,936 - 107,695,096	UniSTS	RGSC3.4
Celera	2	100,251,402 - 100,251,564	UniSTS
Celera	9	36,342,482 - 36,342,614	UniSTS
RGSC_v3.1	2	107,639,897 - 107,640,058	RGD
RH 2.0 Map	9	378.0	RGD
Cytogenetic Map	9	q21	UniSTS

RH132858

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	38,562,207 - 38,562,408 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	42,899,464 - 42,899,664	NCBI	Rnor6.0
Rnor_5.0	9	42,553,568 - 42,553,768	UniSTS	Rnor5.0
RGSC_v3.4	9	35,259,060 - 35,259,260	UniSTS	RGSC3.4
Celera	9	36,330,105 - 36,330,305	UniSTS
Cytogenetic Map	9	q21	UniSTS

RH143602

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	9	46,100,423 - 46,101,243 (+)	Marker Load Pipeline
Rnor_6.0	9	42,942,055 - 42,942,874	NCBI	Rnor6.0
Rnor_5.0	9	42,595,934 - 42,596,753	UniSTS	Rnor5.0
RGSC_v3.4	9	35,302,719 - 35,303,538	UniSTS	RGSC3.4
Celera	9	36,371,579 - 36,372,398	UniSTS
Cytogenetic Map	9	q21	UniSTS

BF413022

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	38,596,626 - 38,596,753 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	42,934,146 - 42,934,272	NCBI	Rnor6.0
Rnor_5.0	9	42,588,025 - 42,588,151	UniSTS	Rnor5.0
RGSC_v3.4	9	35,294,810 - 35,294,936	UniSTS	RGSC3.4
Celera	9	36,363,601 - 36,363,727	UniSTS
RH 3.4 Map	9	357.5	UniSTS
Cytogenetic Map	9	q21	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	92	59	6	356	192	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001034835	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244808	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244809	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244810	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244811	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244812	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244813	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596442	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083566	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083567	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083569	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267149	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267150	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267151	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267152	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267153	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267154	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC105865	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000020955 ⟹ ENSRNOP00000020955

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	46,058,071 - 46,101,521 (-)	Ensembl
mRatBN7.2 Ensembl	9	38,562,192 - 38,605,692 (-)	Ensembl
Rnor_6.0 Ensembl	9	42,899,433 - 42,943,152 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000085260 ⟹ ENSRNOP00000073261

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	46,058,071 - 46,089,576 (-)	Ensembl
mRatBN7.2 Ensembl	9	38,562,177 - 38,603,581 (-)	Ensembl
Rnor_6.0 Ensembl	9	42,899,432 - 42,943,198 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000124022 ⟹ ENSRNOP00000099135

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	46,058,071 - 46,101,521 (-)	Ensembl

RefSeq Acc Id:

NM_001034835 ⟹ NP_001030007

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,058,070 - 46,101,521 (-)	NCBI
mRatBN7.2	9	38,562,176 - 38,605,635 (-)	NCBI
Rnor_6.0	9	42,899,432 - 42,943,152 (-)	NCBI
Rnor_5.0	9	42,553,536 - 42,597,088 (-)	NCBI
RGSC_v3.4	9	35,259,028 - 35,303,816 (-)	RGD
Celera	9	36,330,073 - 36,372,844 (-)	RGD

Sequence:

show sequence

CCGACAACTGCGGGTGACTAGCATGCAGATATTCGCACCCTGACTTGGTTTGGCTGCCTGACTA
CTGACATGGCCCACCGGGGTGGGGAGAGGGACTTCCAGACTTCAGCTCGTCGGATGGGTACCTC
CCTGCTTTTCCAGCTTTCAGTGCATGAGCGGGAACTGGACCTTGTTTTTCTGGATCATAGCTAT
GCAAAACCGTGGAGTGCCCACCCCGATGCCAGCAGCGCCCGCCCCACCCGCATGCTCTTTGTAA
CTCCCCGTCGGCAGCAGGAGAATACTATTGAGTCAGACGTTCCAATAGATGTGGAGACTGTCAC
GGCAACTCCTGCTCCACTCTATGACAATCAGAAGGCAAGAAGTGTGATGAATGAGTGTGAACGG
CATGTGATCTTCGCCAGGACAGATGCAGATGCTCCTCCTCCACCAGAAGACTGGGAAGAGCACG
TCAACAGGACTGGCTGGACAGTGGCTCAGAATAAGCTGTTTAACAAGATCCTCAAAGCCCTGCA
GTCTGACCGGCTCGCACGATTGGCCAATGAAGGGGCTTGCAATGAGCCTGTGCTGCGTCGTGTC
GCTGTGGACAAGTGTGCAAGGAGGGTGCGGCAGGCACTGGCAAGTGTCAGCTGGGACACCAAGC
TGATCCAGTGGCTGCACACCACCCTCGTGGAGACCTTGAGCCTACCCATGCTAGCTGCTTACTT
GGATGCATTGCAGACACTGAAAGGAAAGATCCCAACTCTGATAGACCGGATGCTTGTGTCGTCC
AACACCAAAACTGGGGCAGCAGGAGCTGAGGCCTTGTCACTTCTCCTCAAGAGGCCCTGGGACC
CTGCTGTTGGTGTGCTTTCACATAACAAACCAAGCAAACTCCCTGGTTCTCCTTTGATTCTCAT
CGCCTCCTCTGGTCCCTCCAGCTCTGTGTTCCCCGCCTCACGCCGCCACCGCTTCTGGCAGTCC
CAGCTTTCCTGCTTAGGCAAGGTCATCCCTGTAGCTACCCACCTGCTGAACAATGGCAGTGGGG
TAGGAGTTCTGCAGTGCCTTGAACACATGACTGGGGCAGTGAGAAGCAAAGTGCTGGAGATTCA
CAGCCATTTCCCACACAAGCCCATCATCTTGATTGGATGGAGTACAGGAGCTTTGGTGGCCTGT
CATGTGTCTGTGATGGAATACGTCACTGCTGTTGTCTGCCTTGGGTTTCCTCTGCTTACTGTGG
ATGGACCCCGGGGGGATGTGGATGACCCCCTCTTGGACATGAAGACTCCAGTCCTCTTTGTCAT
TGGTCAGAATTCTCTACAGTGTCACCCTGAAGCCATGGAGGACTTCCGGGAAAAGATTCGAGCA
GAAAATAGCTTGGTGGTGGTTGGAGGAGCTGATGATAATCTCAGAATAAGCAAAGCAAAGAAGA
AATCAGAGGGCTTGACTCAAAGCATGGTGGACAGGTGTATTCAGGATGAGATTGTGGACTTCCT
GACTGGGGTGCTCACTCGTGCTGAGGGTCACGTGGGCTCTGAGCCTCGGGATCAGGATGCTGAG
AAGAAGAAGAAACCCCGGGACGTGGCCCGCAGAGACCTGGCCTTTGAGATTCCTGAGCGAGGCA
GTCGTCCTGCTTCCCCAGCTGCCAGGCTTCCCACATCCCCCTCAGGCTCAGAGGATCTCTCCAG
TGTGTCCAGCAGCCCCACCTCTAGCCCTAAGACCAAAGGGACCACAGTGACCTCTGCCCAGAAG
TCCAGTCAGATCGGGACCTCCCAGCTGCTGAGAAGACATGTGCAGAGGACGGACGCTGTGCTGA
CCCACAGACAAGCCCAAGTTCCCATTTCATCAGAACCAGTGGAGGAGGTAGAGAAAGAAGAGCT
TCGGGTCCAGCTGAAGAGGCACCATCCTTCCAGTCCTCTTCCTGGCGCAAAGCCCTCCAAGCGA
CCGAAGATCAAAGTGTCCCTGATCTCCCAAGGGGACACAGTTGGGGGGCCTTGTACTCTTTCTC
AAGGTGGAACTCCTGAAGCTGCTGGAGGGAAGCCCATCACCATGACTCTGGGAGCTTCAGCAGG
AGCCAAGGAGCTCACTGGACTTCTCACTACAGCCAAGTCAAGTTCTTCTGAAGGTGGAGTTACA
GCCAGCGCAGCACCATCTGTGGCTTCCAGCAATGCCACACCTAATGCCATCCACACGTTGCAGA
GCCGATTGGTGGCCACTTCTCCAGGCAGCTCCCTTCCAGGGGCCGCGTCAGCCAGCAGCCTCCT
CCAAGGCCTCAGCTTCAGCCTGCAGGATATTAGCAGCAAGACCACTGGTCTCCCAGGGAGTCCC
TCCCCAGGGCCAGCCCCACAGGCCACCAGTGTGAAATTGCCAACCCCCATGCAGAGCCTGGGTG
CCATCACCACAGGCACGAGCACCATTGTCCGTACCATTCCTGTGGCCACCACTCTTTCCTCCTT
GGCTGCCACCCCTGGTGGGAAACCCACTGCCATCCACCAGCTGCTGACCAATGGAGGCCTCGCT
AAGTTGGCAAGCAGCCTACCTGGCTTGGCTCAAATTTCCAACCAAGCATCAGGCTTAAAGGTCC
CCACCACCATTACTCTGACACTCCGCGGCCAGCCAAGCAGAATCACTACACTAAGCCCTATGGG
TTCAGGAGCAGCAGCATCCGAGGAGCCCAACTCCCAGATGCTGCCCTCTAGTTCACAGCGCCTG
CCTCCAGCACCCTGAATATGCCAGCAAAATGTCCTTACCAGGTTGGTGATAGCTGCCTCAAGGT
GAACCGTGTGGTCCTGCTGAGCCGGCATGAAGACACCCCTAAGACAGCCATTTTCATCTCTCTA
CTAGCTGTCTCTGGAGTTGGGCCTCTGGCTCTTGAGAAAACATTAGGCCAGGTGATATAGGGCC
AGAAGGTCTGGCCATGTGTGGATTGTTGGCATTTCTACCCCAACACTGATGTAATTTGACCCCA
GTGTCAGTATAGAATGGCTCACTGCAGTCTCATGATGAAGGCAGGAAGAAGTGGCTGTCGGCTG
CTGGCCTGGCCCTTAAGACTTTCGGTGAGAGTGGAGCAGCACAGGAAGTAGTTGGCAAGACATG
CCCAAGGACCCTGTGCTGCTGACAGCTTGGGCTTGGGGCTCTGCGTGACACGTGAGGGCCCAAG
ATTAGCCAGAGAAATGGAATTTACCAAGTCAGAGGGAAACCCCGACTCCCTGAGAGTCCTGTCT
GCTGCCTGGTGATGGAGCAACTGACCAGCTACCGTGCTATCTCTGCTCTTCCAGGAAGCTTGGG
CAGAAGGACAGGGAAGGTTGTGCTTCAGAGTTTCCTTCTTAGAACTTGTCTTTCTGCTTAGAAG
TAGGAAGGTTGTTGACTACTGTGCGAGGCTCTGGGCAGCCTGAGCCTTACAGAACCATGGTCCT
GTGATGTGGACACTGAAGATGGGGCAGTCTCCTTTCCTAGGACACTGCAGACGGAGCTTGGAGT
TCGGCTTGTGTTCCAGAGCAGGCTCCTTTCCCTTTCATACTTAGAAAGTTTCCGTCAAGATGAG
AAGTAAAGCAACTCAAGTGTGATTTGGTTCACGGGGCCATATACAGCTACACCAAAGCCCCTCA
CCTGTAATCTGAGTGGATGCACAGTGTTGAGGAGCCCCGGGCAAGTCAGGTCAGATGTGTGGTA
GGAGTAGAGAGGCCTCCAGACCCTGACTCTGGAGCTGCACTCACAGTGGTTCAGAGTAGAGCTG
TATTCTGAGATTCAGAAGGCGTCAGAGAGTGGAGAGGTACAAAACCTGGATGAGGTGCCTAGTG
CTGGGGCCTTGGTAGCTTCATAGGCCAGAGCGTAGAACCACCAAGAGAGGATAAGACTGGGGGC
TCTGTGAACTCTGAGGGGTCATTTCAGTTGGCAGAGGACCCTGAACAACCCTTTGTGACTTAGG
AGGACAGCTTGAACAACACTGGAGGGGCTGCTCCCGAAAGATGCTGCCCCTGTGTTCTGGAACC
AAAGAAAGATGCTGCCCCTGTGTGTCCTGCTTTGGTGGTTAATCTGTGTGCATCCCATGGGTGA
CTTCTGAGGCATGGCTTACATACCTTGAAGAACTGCAACACTGAGGAGGGGAAGCTGCAGCACA
CTGATCGTCACCTTTGAGGGACTGACCAACAAGGAAGTGGCTGGAGTCTGTAGCCCACTCAGAT
TGGAATGTGGAGACACTTCACCCCGCCCACCTCTCGGCAGACTTGAGGTGTAGCCTCAGAAGGT
AGTACTCTAATGAGTATGTGGAAGGGCCAGGAAGGCTTTGCGGTCTCTTGGGCAACAGGGCTTG
TAATGCCCAGAGGAGGGCGTCGCTGAGGAGCAAAGACAACAACCTTTGGTTGTGTTACTATAAT
AATTTGGGTTGGATGAATTCATAGAAGTGAGCAGAGTGATGGTTCTGATCTTATGTTAGCAAAA
AATAAAAGACAAAATTGAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006244808 ⟹ XP_006244870

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,058,070 - 46,101,641 (-)	NCBI
mRatBN7.2	9	38,562,170 - 38,605,756 (-)	NCBI
Rnor_6.0	9	42,899,432 - 42,943,224 (-)	NCBI
Rnor_5.0	9	42,553,536 - 42,597,088 (-)	NCBI

Sequence:

show sequence

TTTTCCTCGGAGCCCGTGGCGCCGGGCGGTGAGGCGCACGCGCACTGTGATCCAGCTCCGGCGA
GCGCGCGGCCGACAACTGCGGGTGACTAGCATGCAGATATTCGCACCCTGACTTGGTTTGGCTG
CCTGACTACTGACATGGCCCACCGGGGTGGGGAGAGGGACTTCCAGACTTCAGCTCGTCGGATG
GGTACCTCCCTGCTTTTCCAGCTTTCAGTGCATGAGCGGGAACTGGACCTTGTTTTTCTGGATC
ATAGCTATGCAAAACCGTGGAGTGCCCACCCCGATGCCAGCAGCGCCCGCCCCACCCGCATGCT
CTTTGTAACTCCCCGTCGGCAGCAGGAGAATACTATTGAGTCAGACGTTCCAATAGATGTGGAG
ACTGTCACGGCAACTCCTGCTCCACTCTATGACAATCAGAAGGCAAGAAGTGTGATGAATGAGT
GTGAACGGCATGTGATCTTCGCCAGGACAGATGCAGATGCTCCTCCTCCACCAGAAGACTGGGA
AGAGCACGTCAACAGGACTGGCTGGACAGTGGCTCAGAATAAGCTGTTTAACAAGATCCTCAAA
GCCCTGCAGTCTGACCGGCTCGCACGATTGGCCAATGAAGGGGCTTGCAATGAGCCTGTGCTGC
GTCGTGTCGCTGTGGACAAGTGTGCAAGGAGGGTGCGGCAGGCACTGGCAAGTGTCAGCTGGGA
CACCAAGCTGATCCAGTGGCTGCACACCACCCTCGTGGAGACCTTGAGCCTACCCATGCTAGCT
GCTTACTTGGATGCATTGCAGACACTGAAAGGAAAGATCCCAACTCTGATAGACCGGATGCTTG
TGTCGTCCAACACCAAAACTGGGGCAGCAGGAGCTGAGGCCTTGTCACTTCTCCTCAAGAGGCC
CTGGGACCCTGCTGTTGGTGTGCTTTCACATAACAAACCAAGCAAACTCCCTGGTTCTCCTTTG
ATTCTCATCGCCTCCTCTGGTCCCTCCAGCTCTGTGTTCCCCGCCTCACGCCGCCACCGCTTCT
GGCAGTCCCAGCTTTCCTGCTTAGGCAAGGTCATCCCTGTAGCTACCCACCTGCTGAACAATGG
CAGTGGGGTAGGAGTTCTGCAGTGCCTTGAACACATGACTGGGGCAGTGAGAAGCAAAGTGCTG
GAGATTCACAGCCATTTCCCACACAAGCCCATCATCTTGATTGGATGGAGTACAGGAGCTTTGG
TGGCCTGTCATGTGTCTGTGATGGAATACGTCACTGCTGTTGTCTGCCTTGGGTTTCCTCTGCT
TACTGTGGATGGACCCCGGGGGGATGTGGATGACCCCCTCTTGGACATGAAGACTCCAGTCCTC
TTTGTCATTGGTCAGAATTCTCTACAGTGTCACCCTGAAGCCATGGAGGACTTCCGGGAAAAGA
TTCGAGCAGAAAATAGCTTGGTGGTGGTTGGAGGAGCTGATGATAATCTCAGAATAAGCAAAGC
AAAGAAGAAATCAGAGGGCTTGACTCAAAGCATGGTGGACAGGTGTATTCAGGATGAGATTGTG
GACTTCCTGACTGGGGTGCTCACTCGTGCTGAGGGTCACGTGGGCTCTGAGCCTCGGGATCAGG
ATGCTGAGAAGAAGAAGAAACCCCGGGACGTGGCCCGCAGAGACCTGGCCTTTGAGATTCCTGA
GCGAGGCAGTCGTCCTGCTTCCCCAGCTGCCAGGCTTCCCACATCCCCCTCAGGCTCAGAGGAT
CTCTCCAGTGTGTCCAGCAGCCCCACCTCTAGCCCTAAGACCAAAGGGACCACAGTGACCTCTG
CCCAGAAGTCCAGTCAGATCGGGACCTCCCAGCTGCTGAGAAGACATGTGCAGAGGACGGACGC
TGTGCTGACCCACAGACAAGCCCAAGCACAGTTTGCTGCTTTTCTGAAACAAAACATGCTGGTG
AGGAAAGCTTTTCCTCCCGGCACCTCCTCCTGTCTCTTTGTTCCCATTTCATCAGAACCAGTGG
AGGAGGTAGAGAAAGAAGAGCTTCGGGTCCAGCTGAAGAGGCACCATCCTTCCAGTCCTCTTCC
TGGCGCAAAGCCCTCCAAGCGACCGAAGATCAAAGTGTCCCTGATCTCCCAAGGGGACACAGTT
GGGGGGCCTTGTACTCTTTCTCAAGGTGGAACTCCTGAAGCTGCTGGAGGGAAGCCCATCACCA
TGACTCTGGGAGCTTCAGCAGGAGCCAAGGAGCTCACTGGACTTCTCACTACAGCCAAGTCAAG
TTCTTCTGAAGGTGGAGTTACAGCCAGCGCAGCACCATCTGTGGCTTCCAGCAATGCCACACCT
AATGCCATCCACACGTTGCAGAGCCGATTGGTGGCCACTTCTCCAGGCAGCTCCCTTCCAGGGG
CCGCGTCAGCCAGCAGCCTCCTCCAAGGCCTCAGCTTCAGCCTGCAGGATATTAGCAGCAAGAC
CACTGGTCTCCCAGGGAGTCCCTCCCCAGGGCCAGCCCCACAGGCCACCAGTGTGAAATTGCCA
ACCCCCATGCAGAGCCTGGGTGCCATCACCACAGGCACGAGCACCATTGTCCGTACCATTCCTG
TGGCCACCACTCTTTCCTCCTTGGCTGCCACCCCTGGTGGGAAACCCACTGCCATCCACCAGCT
GCTGACCAATGGAGGCCTCGCTAAGTTGGCAAGCAGCCTACCTGGCTTGGCTCAAATTTCCAAC
CAAGCATCAGGCTTAAAGGTCCCCACCACCATTACTCTGACACTCCGCGGCCAGCCAAGCAGAA
TCACTACACTAAGCCCTATGGGTTCAGGAGCAGCAGCATCCGAGGAGCCCAACTCCCAGATGCT
GCCCTCTAGTTCACAGCGCCTGCCTCCAGCACCCTGAATATGCCAGCAAAATGTCCTTACCAGG
TTGGTGATAGCTGCCTCAAGGTGAACCGTGTGGTCCTGCTGAGCCGGCATGAAGACACCCCTAA
GACAGCCATTTTCATCTCTCTACTAGCTGTCTCTGGAGTTGGGCCTCTGGCTCTTGAGAAAACA
TTAGGCCAGGTGATATAGGGCCAGAAGGTCTGGCCATGTGTGGATTGTTGGCATTTCTACCCCA
ACACTGATGTAATTTGACCCCAGTGTCAGTATAGAATGGCTCACTGCAGTCTCATGATGAAGGC
AGGAAGAAGTGGCTGTCGGCTGCTGGCCTGGCCCTTAAGACTTTCGGTGAGAGTGGAGCAGCAC
AGGAAGTAGTTGGCAAGACATGCCCAAGGACCCTGTGCTGCTGACAGCTTGGGCTTGGGGCTCT
GCGTGACACGTGAGGGCCCAAGATTAGCCAGAGAAATGGAATTTACCAAGTCAGAGGGAAACCC
CGACTCCCTGAGAGTCCTGTCTGCTGCCTGGTGATGGAGCAACTGACCAGCTACCGTGCTATCT
CTGCTCTTCCAGGAAGCTTGGGCAGAAGGACAGGGAAGGTTGTGCTTCAGAGTTTCCTTCTTAG
AACTTGTCTTTCTGCTTAGAAGTAGGAAGGTTGTTGACTACTGTGCGAGGCTCTGGGCAGCCTG
AGCCTTACAGAACCATGGTCCTGTGATGTGGACACTGAAGATGGGGCAGTCTCCTTTCCTAGGA
CACTGCAGACGGAGCTTGGAGTTCGGCTTGTGTTCCAGAGCAGGCTCCTTTCCCTTTCATACTT
AGAAAGTTTCCGTCAAGATGAGAAGTAAAGCAACTCAAGTGTGATTTGGTTCACGGGGCCATAT
ACAGCTACACCAAAGCCCCTCACCTGTAATCTGAGTGGATGCACAGTGTTGAGGAGCCCCGGGC
AAGTCAGGTCAGATGTGTGGTAGGAGTAGAGAGGCCTCCAGACCCTGACTCTGGAGCTGCACTC
ACAGTGGTTCAGAGTAGAGCTGTATTCTGAGATTCAGAAGGCGTCAGAGAGTGGAGAGGTACAA
AACCTGGATGAGGTGCCTAGTGCTGGGGCCTTGGTAGCTTCATAGGCCAGAGCGTAGAACCACC
AAGAGAGGATAAGACTGGGGGCTCTGTGAACTCTGAGGGGTCATTTCAGTTGGCAGAGGACCCT
GAACAACCCTTTGTGACTTAGGAGGACAGCTTGAACAACACTGGAGGGGCTGCTCCCGAAAGAT
GCTGCCCCTGTGTTCTGGAACCAAAGAAAGATGCTGCCCCTGTGTGTCCTGCTTTGGTGGTTAA
TCTGTGTGCATCCCATGGGTGACTTCTGAGGCATGGCTTACATACCTTGAAGAACTGCAACACT
GAGGAGGGGAAGCTGCAGCACACTGATCGTCACCTTTGAGGGACTGACCAACAAGGAAGTGGCT
GGAGTCTGTAGCCCACTCAGATTGGAATGTGGAGACACTTCACCCCGCCCACCTCTCGGCAGAC
TTGAGGTGTAGCCTCAGAAGGTAGTACTCTAATGAGTATGTGGAAGGGCCAGGAAGGCTTTGCG
GTCTCTTGGGCAACAGGGCTTGTAATGCCCAGAGGAGGGCGTCGCTGAGGAGCAAAGACAACAA
CCTTTGGTTGTGTTACTATAATAATTTGGGTTGGATGAATTCATAGAAGTGAGCAGAGTGATGG
TTCTGATCTTATGTTAGCAAAAAATAAAAGACAAAATTGA

hide sequence

RefSeq Acc Id:

XM_006244809 ⟹ XP_006244871

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,058,070 - 46,101,388 (-)	NCBI
mRatBN7.2	9	38,562,170 - 38,605,501 (-)	NCBI
Rnor_6.0	9	42,899,432 - 42,942,987 (-)	NCBI
Rnor_5.0	9	42,553,536 - 42,597,088 (-)	NCBI

Sequence:

show sequence

CCCCAGCGCCCGAGGCGCCGGGCCGAGGAGGGCCCGGGGAGGGGAGGCGGGGCCGGGCGGCTCC
TCCTCGCCGGGAACTCGGGATGACCTTGGCCGAGTCGCCCGGGTGACTAGCATGCAGATATTCG
CACCCTGACTTGGTTTGGCTGCCTGACTACTGACATGGCCCACCGGGGTGGGGAGAGGGACTTC
CAGACTTCAGCTCGTCGGATGGGTACCTCCCTGCTTTTCCAGCTTTCAGTGCATGAGCGGGAAC
TGGACCTTGTTTTTCTGGATCATAGCTATGCAAAACCGTGGAGTGCCCACCCCGATGCCAGCAG
CGCCCGCCCCACCCGCATGCTCTTTGTAACTCCCCGTCGGCAGCAGGAGAATACTATTGAGTCA
GACGTTCCAATAGATGTGGAGACTGTCACGGCAACTCCTGCTCCACTCTATGACAATCAGAAGG
CAAGAAGTGTGATGAATGAGTGTGAACGGCATGTGATCTTCGCCAGGACAGATGCAGATGCTCC
TCCTCCACCAGAAGACTGGGAAGAGCACGTCAACAGGACTGGCTGGACAGTGGCTCAGAATAAG
CTGTTTAACAAGATCCTCAAAGCCCTGCAGTCTGACCGGCTCGCACGATTGGCCAATGAAGGGG
CTTGCAATGAGCCTGTGCTGCGTCGTGTCGCTGTGGACAAGTGTGCAAGGAGGGTGCGGCAGGC
ACTGGCAAGTGTCAGCTGGGACACCAAGCTGATCCAGTGGCTGCACACCACCCTCGTGGAGACC
TTGAGCCTACCCATGCTAGCTGCTTACTTGGATGCATTGCAGACACTGAAAGGAAAGATCCCAA
CTCTGATAGACCGGATGCTTGTGTCGTCCAACACCAAAACTGGGGCAGCAGGAGCTGAGGCCTT
GTCACTTCTCCTCAAGAGGCCCTGGGACCCTGCTGTTGGTGTGCTTTCACATAACAAACCAAGC
AAACTCCCTGGTTCTCCTTTGATTCTCATCGCCTCCTCTGGTCCCTCCAGCTCTGTGTTCCCCG
CCTCACGCCGCCACCGCTTCTGGCAGTCCCAGCTTTCCTGCTTAGGCAAGGTCATCCCTGTAGC
TACCCACCTGCTGAACAATGGCAGTGGGGTAGGAGTTCTGCAGTGCCTTGAACACATGACTGGG
GCAGTGAGAAGCAAAGTGCTGGAGATTCACAGCCATTTCCCACACAAGCCCATCATCTTGATTG
GATGGAGTACAGGAGCTTTGGTGGCCTGTCATGTGTCTGTGATGGAATACGTCACTGCTGTTGT
CTGCCTTGGGTTTCCTCTGCTTACTGTGGATGGACCCCGGGGGGATGTGGATGACCCCCTCTTG
GACATGAAGACTCCAGTCCTCTTTGTCATTGGTCAGAATTCTCTACAGTGTCACCCTGAAGCCA
TGGAGGACTTCCGGGAAAAGATTCGAGCAGAAAATAGCTTGGTGGTGGTTGGAGGAGCTGATGA
TAATCTCAGAATAAGCAAAGCAAAGAAGAAATCAGAGGGCTTGACTCAAAGCATGGTGGACAGG
TGTATTCAGGATGAGATTGTGGACTTCCTGACTGGGGTGCTCACTCGTGCTGAGGGTCACGTGG
GCTCTGAGCCTCGGGATCAGGATGCTGAGAAGAAGAAGAAACCCCGGGACGTGGCCCGCAGAGA
CCTGGCCTTTGAGATTCCTGAGCGAGGCAGTCGTCCTGCTTCCCCAGCTGCCAGGCTTCCCACA
TCCCCCTCAGGCTCAGAGGATCTCTCCAGTGTGTCCAGCAGCCCCACCTCTAGCCCTAAGACCA
AAGGGACCACAGTGACCTCTGCCCAGAAGTCCAGTCAGATCGGGACCTCCCAGCTGCTGAGAAG
ACATGTGCAGAGGACGGACGCTGTGCTGACCCACAGACAAGCCCAAGCACAGTTTGCTGCTTTT
CTGAAACAAAACATGCTGGTGAGGAAAGCTTTTCCTCCCGGCACCTCCTCCTGTCTCTTTGTTC
CCATTTCATCAGAACCAGTGGAGGAGGTAGAGAAAGAAGAGCTTCGGGTCCAGCTGAAGAGGCA
CCATCCTTCCAGTCCTCTTCCTGGCGCAAAGCCCTCCAAGCGACCGAAGATCAAAGTGTCCCTG
ATCTCCCAAGGGGACACAGTTGGGGGGCCTTGTACTCTTTCTCAAGGTGGAACTCCTGAAGCTG
CTGGAGGGAAGCCCATCACCATGACTCTGGGAGCTTCAGCAGGAGCCAAGGAGCTCACTGGACT
TCTCACTACAGCCAAGTCAAGTTCTTCTGAAGGTGGAGTTACAGCCAGCGCAGCACCATCTGTG
GCTTCCAGCAATGCCACACCTAATGCCATCCACACGTTGCAGAGCCGATTGGTGGCCACTTCTC
CAGGCAGCTCCCTTCCAGGGGCCGCGTCAGCCAGCAGCCTCCTCCAAGGCCTCAGCTTCAGCCT
GCAGGATATTAGCAGCAAGACCACTGGTCTCCCAGGGAGTCCCTCCCCAGGGCCAGCCCCACAG
GCCACCAGTGTGAAATTGCCAACCCCCATGCAGAGCCTGGGTGCCATCACCACAGGCACGAGCA
CCATTGTCCGTACCATTCCTGTGGCCACCACTCTTTCCTCCTTGGCTGCCACCCCTGGTGGGAA
ACCCACTGCCATCCACCAGCTGCTGACCAATGGAGGCCTCGCTAAGTTGGCAAGCAGCCTACCT
GGCTTGGCTCAAATTTCCAACCAAGCATCAGGCTTAAAGGTCCCCACCACCATTACTCTGACAC
TCCGCGGCCAGCCAAGCAGAATCACTACACTAAGCCCTATGGGTTCAGGAGCAGCAGCATCCGA
GGAGCCCAACTCCCAGATGCTGCCCTCTAGTTCACAGCGCCTGCCTCCAGCACCCTGAATATGC
CAGCAAAATGTCCTTACCAGGTTGGTGATAGCTGCCTCAAGGTGAACCGTGTGGTCCTGCTGAG
CCGGCATGAAGACACCCCTAAGACAGCCATTTTCATCTCTCTACTAGCTGTCTCTGGAGTTGGG
CCTCTGGCTCTTGAGAAAACATTAGGCCAGGTGATATAGGGCCAGAAGGTCTGGCCATGTGTGG
ATTGTTGGCATTTCTACCCCAACACTGATGTAATTTGACCCCAGTGTCAGTATAGAATGGCTCA
CTGCAGTCTCATGATGAAGGCAGGAAGAAGTGGCTGTCGGCTGCTGGCCTGGCCCTTAAGACTT
TCGGTGAGAGTGGAGCAGCACAGGAAGTAGTTGGCAAGACATGCCCAAGGACCCTGTGCTGCTG
ACAGCTTGGGCTTGGGGCTCTGCGTGACACGTGAGGGCCCAAGATTAGCCAGAGAAATGGAATT
TACCAAGTCAGAGGGAAACCCCGACTCCCTGAGAGTCCTGTCTGCTGCCTGGTGATGGAGCAAC
TGACCAGCTACCGTGCTATCTCTGCTCTTCCAGGAAGCTTGGGCAGAAGGACAGGGAAGGTTGT
GCTTCAGAGTTTCCTTCTTAGAACTTGTCTTTCTGCTTAGAAGTAGGAAGGTTGTTGACTACTG
TGCGAGGCTCTGGGCAGCCTGAGCCTTACAGAACCATGGTCCTGTGATGTGGACACTGAAGATG
GGGCAGTCTCCTTTCCTAGGACACTGCAGACGGAGCTTGGAGTTCGGCTTGTGTTCCAGAGCAG
GCTCCTTTCCCTTTCATACTTAGAAAGTTTCCGTCAAGATGAGAAGTAAAGCAACTCAAGTGTG
ATTTGGTTCACGGGGCCATATACAGCTACACCAAAGCCCCTCACCTGTAATCTGAGTGGATGCA
CAGTGTTGAGGAGCCCCGGGCAAGTCAGGTCAGATGTGTGGTAGGAGTAGAGAGGCCTCCAGAC
CCTGACTCTGGAGCTGCACTCACAGTGGTTCAGAGTAGAGCTGTATTCTGAGATTCAGAAGGCG
TCAGAGAGTGGAGAGGTACAAAACCTGGATGAGGTGCCTAGTGCTGGGGCCTTGGTAGCTTCAT
AGGCCAGAGCGTAGAACCACCAAGAGAGGATAAGACTGGGGGCTCTGTGAACTCTGAGGGGTCA
TTTCAGTTGGCAGAGGACCCTGAACAACCCTTTGTGACTTAGGAGGACAGCTTGAACAACACTG
GAGGGGCTGCTCCCGAAAGATGCTGCCCCTGTGTTCTGGAACCAAAGAAAGATGCTGCCCCTGT
GTGTCCTGCTTTGGTGGTTAATCTGTGTGCATCCCATGGGTGACTTCTGAGGCATGGCTTACAT
ACCTTGAAGAACTGCAACACTGAGGAGGGGAAGCTGCAGCACACTGATCGTCACCTTTGAGGGA
CTGACCAACAAGGAAGTGGCTGGAGTCTGTAGCCCACTCAGATTGGAATGTGGAGACACTTCAC
CCCGCCCACCTCTCGGCAGACTTGAGGTGTAGCCTCAGAAGGTAGTACTCTAATGAGTATGTGG
AAGGGCCAGGAAGGCTTTGCGGTCTCTTGGGCAACAGGGCTTGTAATGCCCAGAGGAGGGCGTC
GCTGAGGAGCAAAGACAACAACCTTTGGTTGTGTTACTATAATAATTTGGGTTGGATGAATTCA
TAGAAGTGAGCAGAGTGATGGTTCTGATCTTATGTTAGCAAAAAATAAAAGACAAAATTGA

hide sequence

RefSeq Acc Id:

XM_006244810 ⟹ XP_006244872

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,058,070 - 46,101,357 (-)	NCBI
mRatBN7.2	9	38,562,170 - 38,605,471 (-)	NCBI
Rnor_6.0	9	42,899,432 - 42,942,988 (-)	NCBI
Rnor_5.0	9	42,553,536 - 42,597,088 (-)	NCBI

Sequence:

show sequence

GCCCCAGCGCCCGAGGCGCCGGGCCGAGGAGGGCCCGGGGAGGGGAGGCGGGGCCGGGCGGCTC
CTCCTCGCCGGGAACTCGGGATGACCTTGGCCGAGTCGCCCGGGTGGGCCGTTTTGTGGTTTTG
CGGATCCGTGGCGGGAACCTCACGGAGGAGCGGGCCGTTTGCCGGGCGCCTCGCTGAGGGAGGG
CGAAGAAGAGGCATCCTGAGGCCTCCTAAGGCCCCAAAAAAAATGAGGGCGGGCTCTGGTTTTT
CTTCTCTCAAAACTCCGGTGTACCTTGAGGTGACTAGCATGCAGATATTCGCACCCTGACTTGG
TTTGGCTGCCTGACTACTGACATGGCCCACCGGGGTGGGGAGAGGGACTTCCAGACTTCAGCTC
GTCGGATGGGTACCTCCCTGCTTTTCCAGCTTTCAGTGCATGAGCGGGAACTGGACCTTGTTTT
TCTGGATCATAGCTATGCAAAACCGTGGAGTGCCCACCCCGATGCCAGCAGCGCCCGCCCCACC
CGCATGCTCTTTGTAACTCCCCGTCGGCAGCAGGAGAATACTATTGAGTCAGACGTTCCAATAG
ATGTGGAGACTGTCACGGCAACTCCTGCTCCACTCTATGACAATCAGAAGGCAAGAAGTGTGAT
GAATGAGTGTGAACGGCATGTGATCTTCGCCAGGACAGATGCAGATGCTCCTCCTCCACCAGAA
GACTGGGAAGAGCACGTCAACAGGACTGGCTGGACAGTGGCTCAGAATAAGCTGTTTAACAAGA
TCCTCAAAGCCCTGCAGTCTGACCGGCTCGCACGATTGGCCAATGAAGGGGCTTGCAATGAGCC
TGTGCTGCGTCGTGTCGCTGTGGACAAGTGTGCAAGGAGGGTGCGGCAGGCACTGGCAAGTGTC
AGCTGGGACACCAAGCTGATCCAGTGGCTGCACACCACCCTCGTGGAGACCTTGAGCCTACCCA
TGCTAGCTGCTTACTTGGATGCATTGCAGACACTGAAAGGAAAGATCCCAACTCTGATAGACCG
GATGCTTGTGTCGTCCAACACCAAAACTGGGGCAGCAGGAGCTGAGGCCTTGTCACTTCTCCTC
AAGAGGCCCTGGGACCCTGCTGTTGGTGTGCTTTCACATAACAAACCAAGCAAACTCCCTGGTT
CTCCTTTGATTCTCATCGCCTCCTCTGGTCCCTCCAGCTCTGTGTTCCCCGCCTCACGCCGCCA
CCGCTTCTGGCAGTCCCAGCTTTCCTGCTTAGGCAAGGTCATCCCTGTAGCTACCCACCTGCTG
AACAATGGCAGTGGGGTAGGAGTTCTGCAGTGCCTTGAACACATGACTGGGGCAGTGAGAAGCA
AAGTGCTGGAGATTCACAGCCATTTCCCACACAAGCCCATCATCTTGATTGGATGGAGTACAGG
AGCTTTGGTGGCCTGTCATGTGTCTGTGATGGAATACGTCACTGCTGTTGTCTGCCTTGGGTTT
CCTCTGCTTACTGTGGATGGACCCCGGGGGGATGTGGATGACCCCCTCTTGGACATGAAGACTC
CAGTCCTCTTTGTCATTGGTCAGAATTCTCTACAGTGTCACCCTGAAGCCATGGAGGACTTCCG
GGAAAAGATTCGAGCAGAAAATAGCTTGGTGGTGGTTGGAGGAGCTGATGATAATCTCAGAATA
AGCAAAGCAAAGAAGAAATCAGAGGGCTTGACTCAAAGCATGGTGGACAGGTGTATTCAGGATG
AGATTGTGGACTTCCTGACTGGGGTGCTCACTCGTGCTGAGGGTCACGTGGGCTCTGAGCCTCG
GGATCAGGATGCTGAGAAGAAGAAGAAACCCCGGGACGTGGCCCGCAGAGACCTGGCCTTTGAG
ATTCCTGAGCGAGGCAGTCGTCCTGCTTCCCCAGCTGCCAGGCTTCCCACATCCCCCTCAGGCT
CAGAGGATCTCTCCAGTGTGTCCAGCAGCCCCACCTCTAGCCCTAAGACCAAAGGGACCACAGT
GACCTCTGCCCAGAAGTCCAGTCAGATCGGGACCTCCCAGCTGCTGAGAAGACATGTGCAGAGG
ACGGACGCTGTGCTGACCCACAGACAAGCCCAAGCACAGTTTGCTGCTTTTCTGAAACAAAACA
TGCTGGTGAGGAAAGCTTTTCCTCCCGGCACCTCCTCCTGTCTCTTTGTTCCCATTTCATCAGA
ACCAGTGGAGGAGGTAGAGAAAGAAGAGCTTCGGGTCCAGCTGAAGAGGCACCATCCTTCCAGT
CCTCTTCCTGGCGCAAAGCCCTCCAAGCGACCGAAGATCAAAGTGTCCCTGATCTCCCAAGGGG
ACACAGTTGGGGGGCCTTGTACTCTTTCTCAAGGTGGAACTCCTGAAGCTGCTGGAGGGAAGCC
CATCACCATGACTCTGGGAGCTTCAGCAGGAGCCAAGGAGCTCACTGGACTTCTCACTACAGCC
AAGTCAAGTTCTTCTGAAGGTGGAGTTACAGCCAGCGCAGCACCATCTGTGGCTTCCAGCAATG
CCACACCTAATGCCATCCACACGTTGCAGAGCCGATTGGTGGCCACTTCTCCAGGCAGCTCCCT
TCCAGGGGCCGCGTCAGCCAGCAGCCTCCTCCAAGGCCTCAGCTTCAGCCTGCAGGATATTAGC
AGCAAGACCACTGGTCTCCCAGGGAGTCCCTCCCCAGGGCCAGCCCCACAGGCCACCAGTGTGA
AATTGCCAACCCCCATGCAGAGCCTGGGTGCCATCACCACAGGCACGAGCACCATTGTCCGTAC
CATTCCTGTGGCCACCACTCTTTCCTCCTTGGCTGCCACCCCTGGTGGGAAACCCACTGCCATC
CACCAGCTGCTGACCAATGGAGGCCTCGCTAAGTTGGCAAGCAGCCTACCTGGCTTGGCTCAAA
TTTCCAACCAAGCATCAGGCTTAAAGGTCCCCACCACCATTACTCTGACACTCCGCGGCCAGCC
AAGCAGAATCACTACACTAAGCCCTATGGGTTCAGGAGCAGCAGCATCCGAGGAGCCCAACTCC
CAGATGCTGCCCTCTAGTTCACAGCGCCTGCCTCCAGCACCCTGAATATGCCAGCAAAATGTCC
TTACCAGGTTGGTGATAGCTGCCTCAAGGTGAACCGTGTGGTCCTGCTGAGCCGGCATGAAGAC
ACCCCTAAGACAGCCATTTTCATCTCTCTACTAGCTGTCTCTGGAGTTGGGCCTCTGGCTCTTG
AGAAAACATTAGGCCAGGTGATATAGGGCCAGAAGGTCTGGCCATGTGTGGATTGTTGGCATTT
CTACCCCAACACTGATGTAATTTGACCCCAGTGTCAGTATAGAATGGCTCACTGCAGTCTCATG
ATGAAGGCAGGAAGAAGTGGCTGTCGGCTGCTGGCCTGGCCCTTAAGACTTTCGGTGAGAGTGG
AGCAGCACAGGAAGTAGTTGGCAAGACATGCCCAAGGACCCTGTGCTGCTGACAGCTTGGGCTT
GGGGCTCTGCGTGACACGTGAGGGCCCAAGATTAGCCAGAGAAATGGAATTTACCAAGTCAGAG
GGAAACCCCGACTCCCTGAGAGTCCTGTCTGCTGCCTGGTGATGGAGCAACTGACCAGCTACCG
TGCTATCTCTGCTCTTCCAGGAAGCTTGGGCAGAAGGACAGGGAAGGTTGTGCTTCAGAGTTTC
CTTCTTAGAACTTGTCTTTCTGCTTAGAAGTAGGAAGGTTGTTGACTACTGTGCGAGGCTCTGG
GCAGCCTGAGCCTTACAGAACCATGGTCCTGTGATGTGGACACTGAAGATGGGGCAGTCTCCTT
TCCTAGGACACTGCAGACGGAGCTTGGAGTTCGGCTTGTGTTCCAGAGCAGGCTCCTTTCCCTT
TCATACTTAGAAAGTTTCCGTCAAGATGAGAAGTAAAGCAACTCAAGTGTGATTTGGTTCACGG
GGCCATATACAGCTACACCAAAGCCCCTCACCTGTAATCTGAGTGGATGCACAGTGTTGAGGAG
CCCCGGGCAAGTCAGGTCAGATGTGTGGTAGGAGTAGAGAGGCCTCCAGACCCTGACTCTGGAG
CTGCACTCACAGTGGTTCAGAGTAGAGCTGTATTCTGAGATTCAGAAGGCGTCAGAGAGTGGAG
AGGTACAAAACCTGGATGAGGTGCCTAGTGCTGGGGCCTTGGTAGCTTCATAGGCCAGAGCGTA
GAACCACCAAGAGAGGATAAGACTGGGGGCTCTGTGAACTCTGAGGGGTCATTTCAGTTGGCAG
AGGACCCTGAACAACCCTTTGTGACTTAGGAGGACAGCTTGAACAACACTGGAGGGGCTGCTCC
CGAAAGATGCTGCCCCTGTGTTCTGGAACCAAAGAAAGATGCTGCCCCTGTGTGTCCTGCTTTG
GTGGTTAATCTGTGTGCATCCCATGGGTGACTTCTGAGGCATGGCTTACATACCTTGAAGAACT
GCAACACTGAGGAGGGGAAGCTGCAGCACACTGATCGTCACCTTTGAGGGACTGACCAACAAGG
AAGTGGCTGGAGTCTGTAGCCCACTCAGATTGGAATGTGGAGACACTTCACCCCGCCCACCTCT
CGGCAGACTTGAGGTGTAGCCTCAGAAGGTAGTACTCTAATGAGTATGTGGAAGGGCCAGGAAG
GCTTTGCGGTCTCTTGGGCAACAGGGCTTGTAATGCCCAGAGGAGGGCGTCGCTGAGGAGCAAA
GACAACAACCTTTGGTTGTGTTACTATAATAATTTGGGTTGGATGAATTCATAGAAGTGAGCAG
AGTGATGGTTCTGATCTTATGTTAGCAAAAAATAAAAGACAAAATTGA

hide sequence

RefSeq Acc Id:

XM_006244811 ⟹ XP_006244873

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,058,070 - 46,100,480 (-)	NCBI
mRatBN7.2	9	38,562,170 - 38,605,644 (-)	NCBI
Rnor_6.0	9	42,899,432 - 42,943,161 (-)	NCBI
Rnor_5.0	9	42,553,536 - 42,597,088 (-)	NCBI

Sequence:

show sequence

AGCGCGCGGCCGACAACTGCGGGTGACTAGCATGCAGATATTCGCACCCTGACTTGGTTTGGCT
GCCTGACTACTGACATGGCCCACCGGGGTGGGGAGAGGGACTTCCAGACTTCAGCTCGTCGGAT
GGGTACCTCCCTGCTTTTCCAGCTTTCAGTGCATGAGCGGGAACTGGACCTTGTTTTTCTGGAT
CATAGCTATGCAAAACCGTGGAGTGCCCACCCCGATGCCAGCAGCGCCCGCCCCACCCGCATGC
TCTTTGTAACTCCCCGTCGGCAGCAGGAGAATACTATGTGAGTTTGAGAATACCATTGAGTCAG
ACGTTCCAATAGATGTGGAGACTGTCACGGCAACTCCTGCTCCACTCTATGACAATCAGAAGGC
AAGAAGTGTGATGAATGAGTGTGAACGGCATGTGATCTTCGCCAGGACAGATGCAGATGCTCCT
CCTCCACCAGAAGACTGGGAAGAGCACGTCAACAGGACTGGCTGGACAGTGGCTCAGAATAAGC
TGTTTAACAAGATCCTCAAAGCCCTGCAGTCTGACCGGCTCGCACGATTGGCCAATGAAGGGGC
TTGCAATGAGCCTGTGCTGCGTCGTGTCGCTGTGGACAAGTGTGCAAGGAGGGTGCGGCAGGCA
CTGGCAAGTGTCAGCTGGGACACCAAGCTGATCCAGTGGCTGCACACCACCCTCGTGGAGACCT
TGAGCCTACCCATGCTAGCTGCTTACTTGGATGCATTGCAGACACTGAAAGGAAAGATCCCAAC
TCTGATAGACCGGATGCTTGTGTCGTCCAACACCAAAACTGGGGCAGCAGGAGCTGAGGCCTTG
TCACTTCTCCTCAAGAGGCCCTGGGACCCTGCTGTTGGTGTGCTTTCACATAACAAACCAAGCA
AACTCCCTGGTTCTCCTTTGATTCTCATCGCCTCCTCTGGTCCCTCCAGCTCTGTGTTCCCCGC
CTCACGCCGCCACCGCTTCTGGCAGTCCCAGCTTTCCTGCTTAGGCAAGGTCATCCCTGTAGCT
ACCCACCTGCTGAACAATGGCAGTGGGGTAGGAGTTCTGCAGTGCCTTGAACACATGACTGGGG
CAGTGAGAAGCAAAGTGCTGGAGATTCACAGCCATTTCCCACACAAGCCCATCATCTTGATTGG
ATGGAGTACAGGAGCTTTGGTGGCCTGTCATGTGTCTGTGATGGAATACGTCACTGCTGTTGTC
TGCCTTGGGTTTCCTCTGCTTACTGTGGATGGACCCCGGGGGGATGTGGATGACCCCCTCTTGG
ACATGAAGACTCCAGTCCTCTTTGTCATTGGTCAGAATTCTCTACAGTGTCACCCTGAAGCCAT
GGAGGACTTCCGGGAAAAGATTCGAGCAGAAAATAGCTTGGTGGTGGTTGGAGGAGCTGATGAT
AATCTCAGAATAAGCAAAGCAAAGAAGAAATCAGAGGGCTTGACTCAAAGCATGGTGGACAGGT
GTATTCAGGATGAGATTGTGGACTTCCTGACTGGGGTGCTCACTCGTGCTGAGGGTCACGTGGG
CTCTGAGCCTCGGGATCAGGATGCTGAGAAGAAGAAGAAACCCCGGGACGTGGCCCGCAGAGAC
CTGGCCTTTGAGATTCCTGAGCGAGGCAGTCGTCCTGCTTCCCCAGCTGCCAGGCTTCCCACAT
CCCCCTCAGGCTCAGAGGATCTCTCCAGTGTGTCCAGCAGCCCCACCTCTAGCCCTAAGACCAA
AGGGACCACAGTGACCTCTGCCCAGAAGTCCAGTCAGATCGGGACCTCCCAGCTGCTGAGAAGA
CATGTGCAGAGGACGGACGCTGTGCTGACCCACAGACAAGCCCAAGCACAGTTTGCTGCTTTTC
TGAAACAAAACATGCTGGTGAGGAAAGCTTTTCCTCCCGGCACCTCCTCCTGTCTCTTTGTTCC
CATTTCATCAGAACCAGTGGAGGAGGTAGAGAAAGAAGAGCTTCGGGTCCAGCTGAAGAGGCAC
CATCCTTCCAGTCCTCTTCCTGGCGCAAAGCCCTCCAAGCGACCGAAGATCAAAGTGTCCCTGA
TCTCCCAAGGGGACACAGTTGGGGGGCCTTGTACTCTTTCTCAAGGTGGAACTCCTGAAGCTGC
TGGAGGGAAGCCCATCACCATGACTCTGGGAGCTTCAGCAGGAGCCAAGGAGCTCACTGGACTT
CTCACTACAGCCAAGTCAAGTTCTTCTGAAGGTGGAGTTACAGCCAGCGCAGCACCATCTGTGG
CTTCCAGCAATGCCACACCTAATGCCATCCACACGTTGCAGAGCCGATTGGTGGCCACTTCTCC
AGGCAGCTCCCTTCCAGGGGCCGCGTCAGCCAGCAGCCTCCTCCAAGGCCTCAGCTTCAGCCTG
CAGGATATTAGCAGCAAGACCACTGGTCTCCCAGGGAGTCCCTCCCCAGGGCCAGCCCCACAGG
CCACCAGTGTGAAATTGCCAACCCCCATGCAGAGCCTGGGTGCCATCACCACAGGCACGAGCAC
CATTGTCCGTACCATTCCTGTGGCCACCACTCTTTCCTCCTTGGCTGCCACCCCTGGTGGGAAA
CCCACTGCCATCCACCAGCTGCTGACCAATGGAGGCCTCGCTAAGTTGGCAAGCAGCCTACCTG
GCTTGGCTCAAATTTCCAACCAAGCATCAGGCTTAAAGGTCCCCACCACCATTACTCTGACACT
CCGCGGCCAGCCAAGCAGAATCACTACACTAAGCCCTATGGGTTCAGGAGCAGCAGCATCCGAG
GAGCCCAACTCCCAGATGCTGCCCTCTAGTTCACAGCGCCTGCCTCCAGCACCCTGAATATGCC
AGCAAAATGTCCTTACCAGGTTGGTGATAGCTGCCTCAAGGTGAACCGTGTGGTCCTGCTGAGC
CGGCATGAAGACACCCCTAAGACAGCCATTTTCATCTCTCTACTAGCTGTCTCTGGAGTTGGGC
CTCTGGCTCTTGAGAAAACATTAGGCCAGGTGATATAGGGCCAGAAGGTCTGGCCATGTGTGGA
TTGTTGGCATTTCTACCCCAACACTGATGTAATTTGACCCCAGTGTCAGTATAGAATGGCTCAC
TGCAGTCTCATGATGAAGGCAGGAAGAAGTGGCTGTCGGCTGCTGGCCTGGCCCTTAAGACTTT
CGGTGAGAGTGGAGCAGCACAGGAAGTAGTTGGCAAGACATGCCCAAGGACCCTGTGCTGCTGA
CAGCTTGGGCTTGGGGCTCTGCGTGACACGTGAGGGCCCAAGATTAGCCAGAGAAATGGAATTT
ACCAAGTCAGAGGGAAACCCCGACTCCCTGAGAGTCCTGTCTGCTGCCTGGTGATGGAGCAACT
GACCAGCTACCGTGCTATCTCTGCTCTTCCAGGAAGCTTGGGCAGAAGGACAGGGAAGGTTGTG
CTTCAGAGTTTCCTTCTTAGAACTTGTCTTTCTGCTTAGAAGTAGGAAGGTTGTTGACTACTGT
GCGAGGCTCTGGGCAGCCTGAGCCTTACAGAACCATGGTCCTGTGATGTGGACACTGAAGATGG
GGCAGTCTCCTTTCCTAGGACACTGCAGACGGAGCTTGGAGTTCGGCTTGTGTTCCAGAGCAGG
CTCCTTTCCCTTTCATACTTAGAAAGTTTCCGTCAAGATGAGAAGTAAAGCAACTCAAGTGTGA
TTTGGTTCACGGGGCCATATACAGCTACACCAAAGCCCCTCACCTGTAATCTGAGTGGATGCAC
AGTGTTGAGGAGCCCCGGGCAAGTCAGGTCAGATGTGTGGTAGGAGTAGAGAGGCCTCCAGACC
CTGACTCTGGAGCTGCACTCACAGTGGTTCAGAGTAGAGCTGTATTCTGAGATTCAGAAGGCGT
CAGAGAGTGGAGAGGTACAAAACCTGGATGAGGTGCCTAGTGCTGGGGCCTTGGTAGCTTCATA
GGCCAGAGCGTAGAACCACCAAGAGAGGATAAGACTGGGGGCTCTGTGAACTCTGAGGGGTCAT
TTCAGTTGGCAGAGGACCCTGAACAACCCTTTGTGACTTAGGAGGACAGCTTGAACAACACTGG
AGGGGCTGCTCCCGAAAGATGCTGCCCCTGTGTTCTGGAACCAAAGAAAGATGCTGCCCCTGTG
TGTCCTGCTTTGGTGGTTAATCTGTGTGCATCCCATGGGTGACTTCTGAGGCATGGCTTACATA
CCTTGAAGAACTGCAACACTGAGGAGGGGAAGCTGCAGCACACTGATCGTCACCTTTGAGGGAC
TGACCAACAAGGAAGTGGCTGGAGTCTGTAGCCCACTCAGATTGGAATGTGGAGACACTTCACC
CCGCCCACCTCTCGGCAGACTTGAGGTGTAGCCTCAGAAGGTAGTACTCTAATGAGTATGTGGA
AGGGCCAGGAAGGCTTTGCGGTCTCTTGGGCAACAGGGCTTGTAATGCCCAGAGGAGGGCGTCG
CTGAGGAGCAAAGACAACAACCTTTGGTTGTGTTACTATAATAATTTGGGTTGGATGAATTCAT
AGAAGTGAGCAGAGTGATGGTTCTGATCTTATGTTAGCAAAAAATAAAAGACAAAATTGA

hide sequence

RefSeq Acc Id:

XM_006244812 ⟹ XP_006244874

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,058,070 - 46,100,354 (-)	NCBI
mRatBN7.2	9	38,562,170 - 38,604,463 (-)	NCBI
Rnor_6.0	9	42,899,432 - 42,941,930 (-)	NCBI
Rnor_5.0	9	42,553,536 - 42,597,088 (-)	NCBI

Sequence:

show sequence

CCGTGGAGTGCCCACCCCGATGCCAGCAGCGCCCGCCCCACCCGCATGCTCTTTGTAACTCCCC
GTCGGCAGCAGGAGAATACTATATGTGGAGACTGTCACGGCAACTCCTGCTCCACTCTATGACA
ATCAGAAGGCAAGAAGTGTGATGAATGAGTGTGAACGGCATGTGATCTTCGCCAGGACAGATGC
AGATGCTCCTCCTCCACCAGAAGACTGGGAAGAGCACGTCAACAGGACTGGCTGGACAGTGGCT
CAGAATAAGCTGTTTAACAAGATCCTCAAAGCCCTGCAGTCTGACCGGCTCGCACGATTGGCCA
ATGAAGGGGCTTGCAATGAGCCTGTGCTGCGTCGTGTCGCTGTGGACAAGTGTGCAAGGAGGGT
GCGGCAGGCACTGGCAAGTGTCAGCTGGGACACCAAGCTGATCCAGTGGCTGCACACCACCCTC
GTGGAGACCTTGAGCCTACCCATGCTAGCTGCTTACTTGGATGCATTGCAGACACTGAAAGGAA
AGATCCCAACTCTGATAGACCGGATGCTTGTGTCGTCCAACACCAAAACTGGGGCAGCAGGAGC
TGAGGCCTTGTCACTTCTCCTCAAGAGGCCCTGGGACCCTGCTGTTGGTGTGCTTTCACATAAC
AAACCAAGCAAACTCCCTGGTTCTCCTTTGATTCTCATCGCCTCCTCTGGTCCCTCCAGCTCTG
TGTTCCCCGCCTCACGCCGCCACCGCTTCTGGCAGTCCCAGCTTTCCTGCTTAGGCAAGGTCAT
CCCTGTAGCTACCCACCTGCTGAACAATGGCAGTGGGGTAGGAGTTCTGCAGTGCCTTGAACAC
ATGACTGGGGCAGTGAGAAGCAAAGTGCTGGAGATTCACAGCCATTTCCCACACAAGCCCATCA
TCTTGATTGGATGGAGTACAGGAGCTTTGGTGGCCTGTCATGTGTCTGTGATGGAATACGTCAC
TGCTGTTGTCTGCCTTGGGTTTCCTCTGCTTACTGTGGATGGACCCCGGGGGGATGTGGATGAC
CCCCTCTTGGACATGAAGACTCCAGTCCTCTTTGTCATTGGTCAGAATTCTCTACAGTGTCACC
CTGAAGCCATGGAGGACTTCCGGGAAAAGATTCGAGCAGAAAATAGCTTGGTGGTGGTTGGAGG
AGCTGATGATAATCTCAGAATAAGCAAAGCAAAGAAGAAATCAGAGGGCTTGACTCAAAGCATG
GTGGACAGGTGTATTCAGGATGAGATTGTGGACTTCCTGACTGGGGTGCTCACTCGTGCTGAGG
GTCACGTGGGCTCTGAGCCTCGGGATCAGGATGCTGAGAAGAAGAAGAAACCCCGGGACGTGGC
CCGCAGAGACCTGGCCTTTGAGATTCCTGAGCGAGGCAGTCGTCCTGCTTCCCCAGCTGCCAGG
CTTCCCACATCCCCCTCAGGCTCAGAGGATCTCTCCAGTGTGTCCAGCAGCCCCACCTCTAGCC
CTAAGACCAAAGGGACCACAGTGACCTCTGCCCAGAAGTCCAGTCAGATCGGGACCTCCCAGCT
GCTGAGAAGACATGTGCAGAGGACGGACGCTGTGCTGACCCACAGACAAGCCCAAGCACAGTTT
GCTGCTTTTCTGAAACAAAACATGCTGGTGAGGAAAGCTTTTCCTCCCGGCACCTCCTCCTGTC
TCTTTGTTCCCATTTCATCAGAACCAGTGGAGGAGGTAGAGAAAGAAGAGCTTCGGGTCCAGCT
GAAGAGGCACCATCCTTCCAGTCCTCTTCCTGGCGCAAAGCCCTCCAAGCGACCGAAGATCAAA
GTGTCCCTGATCTCCCAAGGGGACACAGTTGGGGGGCCTTGTACTCTTTCTCAAGGTGGAACTC
CTGAAGCTGCTGGAGGGAAGCCCATCACCATGACTCTGGGAGCTTCAGCAGGAGCCAAGGAGCT
CACTGGACTTCTCACTACAGCCAAGTCAAGTTCTTCTGAAGGTGGAGTTACAGCCAGCGCAGCA
CCATCTGTGGCTTCCAGCAATGCCACACCTAATGCCATCCACACGTTGCAGAGCCGATTGGTGG
CCACTTCTCCAGGCAGCTCCCTTCCAGGGGCCGCGTCAGCCAGCAGCCTCCTCCAAGGCCTCAG
CTTCAGCCTGCAGGATATTAGCAGCAAGACCACTGGTCTCCCAGGGAGTCCCTCCCCAGGGCCA
GCCCCACAGGCCACCAGTGTGAAATTGCCAACCCCCATGCAGAGCCTGGGTGCCATCACCACAG
GCACGAGCACCATTGTCCGTACCATTCCTGTGGCCACCACTCTTTCCTCCTTGGCTGCCACCCC
TGGTGGGAAACCCACTGCCATCCACCAGCTGCTGACCAATGGAGGCCTCGCTAAGTTGGCAAGC
AGCCTACCTGGCTTGGCTCAAATTTCCAACCAAGCATCAGGCTTAAAGGTCCCCACCACCATTA
CTCTGACACTCCGCGGCCAGCCAAGCAGAATCACTACACTAAGCCCTATGGGTTCAGGAGCAGC
AGCATCCGAGGAGCCCAACTCCCAGATGCTGCCCTCTAGTTCACAGCGCCTGCCTCCAGCACCC
TGAATATGCCAGCAAAATGTCCTTACCAGGTTGGTGATAGCTGCCTCAAGGTGAACCGTGTGGT
CCTGCTGAGCCGGCATGAAGACACCCCTAAGACAGCCATTTTCATCTCTCTACTAGCTGTCTCT
GGAGTTGGGCCTCTGGCTCTTGAGAAAACATTAGGCCAGGTGATATAGGGCCAGAAGGTCTGGC
CATGTGTGGATTGTTGGCATTTCTACCCCAACACTGATGTAATTTGACCCCAGTGTCAGTATAG
AATGGCTCACTGCAGTCTCATGATGAAGGCAGGAAGAAGTGGCTGTCGGCTGCTGGCCTGGCCC
TTAAGACTTTCGGTGAGAGTGGAGCAGCACAGGAAGTAGTTGGCAAGACATGCCCAAGGACCCT
GTGCTGCTGACAGCTTGGGCTTGGGGCTCTGCGTGACACGTGAGGGCCCAAGATTAGCCAGAGA
AATGGAATTTACCAAGTCAGAGGGAAACCCCGACTCCCTGAGAGTCCTGTCTGCTGCCTGGTGA
TGGAGCAACTGACCAGCTACCGTGCTATCTCTGCTCTTCCAGGAAGCTTGGGCAGAAGGACAGG
GAAGGTTGTGCTTCAGAGTTTCCTTCTTAGAACTTGTCTTTCTGCTTAGAAGTAGGAAGGTTGT
TGACTACTGTGCGAGGCTCTGGGCAGCCTGAGCCTTACAGAACCATGGTCCTGTGATGTGGACA
CTGAAGATGGGGCAGTCTCCTTTCCTAGGACACTGCAGACGGAGCTTGGAGTTCGGCTTGTGTT
CCAGAGCAGGCTCCTTTCCCTTTCATACTTAGAAAGTTTCCGTCAAGATGAGAAGTAAAGCAAC
TCAAGTGTGATTTGGTTCACGGGGCCATATACAGCTACACCAAAGCCCCTCACCTGTAATCTGA
GTGGATGCACAGTGTTGAGGAGCCCCGGGCAAGTCAGGTCAGATGTGTGGTAGGAGTAGAGAGG
CCTCCAGACCCTGACTCTGGAGCTGCACTCACAGTGGTTCAGAGTAGAGCTGTATTCTGAGATT
CAGAAGGCGTCAGAGAGTGGAGAGGTACAAAACCTGGATGAGGTGCCTAGTGCTGGGGCCTTGG
TAGCTTCATAGGCCAGAGCGTAGAACCACCAAGAGAGGATAAGACTGGGGGCTCTGTGAACTCT
GAGGGGTCATTTCAGTTGGCAGAGGACCCTGAACAACCCTTTGTGACTTAGGAGGACAGCTTGA
ACAACACTGGAGGGGCTGCTCCCGAAAGATGCTGCCCCTGTGTTCTGGAACCAAAGAAAGATGC
TGCCCCTGTGTGTCCTGCTTTGGTGGTTAATCTGTGTGCATCCCATGGGTGACTTCTGAGGCAT
GGCTTACATACCTTGAAGAACTGCAACACTGAGGAGGGGAAGCTGCAGCACACTGATCGTCACC
TTTGAGGGACTGACCAACAAGGAAGTGGCTGGAGTCTGTAGCCCACTCAGATTGGAATGTGGAG
ACACTTCACCCCGCCCACCTCTCGGCAGACTTGAGGTGTAGCCTCAGAAGGTAGTACTCTAATG
AGTATGTGGAAGGGCCAGGAAGGCTTTGCGGTCTCTTGGGCAACAGGGCTTGTAATGCCCAGAG
GAGGGCGTCGCTGAGGAGCAAAGACAACAACCTTTGGTTGTGTTACTATAATAATTTGGGTTGG
ATGAATTCATAGAAGTGAGCAGAGTGATGGTTCTGATCTTATGTTAGCAAAAAATAAAAGACAA
AATTGA

hide sequence

RefSeq Acc Id:

XM_039083566 ⟹ XP_038939494

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,058,070 - 46,101,643 (-)	NCBI
mRatBN7.2	9	38,562,170 - 38,605,757 (-)	NCBI

RefSeq Acc Id:

XM_039083567 ⟹ XP_038939495

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,058,070 - 46,101,580 (-)	NCBI
mRatBN7.2	9	38,562,170 - 38,604,449 (-)	NCBI

RefSeq Acc Id:

XM_039083569 ⟹ XP_038939497

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,058,070 - 46,084,090 (-)	NCBI
mRatBN7.2	9	38,562,170 - 38,588,201 (-)	NCBI

RefSeq Acc Id:

XM_063267147 ⟹ XP_063123217

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,058,070 - 46,101,019 (-)	NCBI

RefSeq Acc Id:

XM_063267149 ⟹ XP_063123219

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,058,070 - 46,101,388 (-)	NCBI

RefSeq Acc Id:

XM_063267150 ⟹ XP_063123220

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,058,070 - 46,101,605 (-)	NCBI

RefSeq Acc Id:

XM_063267151 ⟹ XP_063123221

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,058,070 - 46,101,357 (-)	NCBI

RefSeq Acc Id:

XM_063267152 ⟹ XP_063123222

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,058,070 - 46,100,428 (-)	NCBI

RefSeq Acc Id:

XM_063267153 ⟹ XP_063123223

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,058,070 - 46,098,094 (-)	NCBI

RefSeq Acc Id:

XM_063267154 ⟹ XP_063123224

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,058,070 - 46,100,230 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001030007	(Get FASTA)	NCBI Sequence Viewer
	XP_006244870	(Get FASTA)	NCBI Sequence Viewer
	XP_006244871	(Get FASTA)	NCBI Sequence Viewer
	XP_006244872	(Get FASTA)	NCBI Sequence Viewer
	XP_006244873	(Get FASTA)	NCBI Sequence Viewer
	XP_006244874	(Get FASTA)	NCBI Sequence Viewer
	XP_038939494	(Get FASTA)	NCBI Sequence Viewer
	XP_038939495	(Get FASTA)	NCBI Sequence Viewer
	XP_038939497	(Get FASTA)	NCBI Sequence Viewer
	XP_063123217	(Get FASTA)	NCBI Sequence Viewer
	XP_063123219	(Get FASTA)	NCBI Sequence Viewer
	XP_063123220	(Get FASTA)	NCBI Sequence Viewer
	XP_063123221	(Get FASTA)	NCBI Sequence Viewer
	XP_063123222	(Get FASTA)	NCBI Sequence Viewer
	XP_063123223	(Get FASTA)	NCBI Sequence Viewer
	XP_063123224	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI05866	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000020955
	ENSRNOP00000073261
	ENSRNOP00000099135
GenBank Protein	Q3KR73	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001030007 ⟸ NM_001034835

- UniProtKB:

Q3KR73 (UniProtKB/Swiss-Prot), A0A0G2K522 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAHRGGERDFQTSARRMGTSLLFQLSVHERELDLVFLDHSYAKPWSAHPDASSARPTRMLFVTP
RRQQENTIESDVPIDVETVTATPAPLYDNQKARSVMNECERHVIFARTDADAPPPPEDWEEHVN
RTGWTVAQNKLFNKILKALQSDRLARLANEGACNEPVLRRVAVDKCARRVRQALASVSWDTKLI
QWLHTTLVETLSLPMLAAYLDALQTLKGKIPTLIDRMLVSSNTKTGAAGAEALSLLLKRPWDPA
VGVLSHNKPSKLPGSPLILIASSGPSSSVFPASRRHRFWQSQLSCLGKVIPVATHLLNNGSGVG
VLQCLEHMTGAVRSKVLEIHSHFPHKPIILIGWSTGALVACHVSVMEYVTAVVCLGFPLLTVDG
PRGDVDDPLLDMKTPVLFVIGQNSLQCHPEAMEDFREKIRAENSLVVVGGADDNLRISKAKKKS
EGLTQSMVDRCIQDEIVDFLTGVLTRAEGHVGSEPRDQDAEKKKKPRDVARRDLAFEIPERGSR
PASPAARLPTSPSGSEDLSSVSSSPTSSPKTKGTTVTSAQKSSQIGTSQLLRRHVQRTDAVLTH
RQAQVPISSEPVEEVEKEELRVQLKRHHPSSPLPGAKPSKRPKIKVSLISQGDTVGGPCTLSQG
GTPEAAGGKPITMTLGASAGAKELTGLLTTAKSSSSEGGVTASAAPSVASSNATPNAIHTLQSR
LVATSPGSSLPGAASASSLLQGLSFSLQDISSKTTGLPGSPSPGPAPQATSVKLPTPMQSLGAI
TTGTSTIVRTIPVATTLSSLAATPGGKPTAIHQLLTNGGLAKLASSLPGLAQISNQASGLKVPT
TITLTLRGQPSRITTLSPMGSGAAASEEPNSQMLPSSSQRLPPAP

hide sequence

RefSeq Acc Id:	XP_006244870 ⟸ XM_006244808
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K522 (UniProtKB/TrEMBL), A0A8L2QAX1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAHRGGERDFQTSARRMGTSLLFQLSVHERELDLVFLDHSYAKPWSAHPDASSARPTRMLFVTP RRQQENTIESDVPIDVETVTATPAPLYDNQKARSVMNECERHVIFARTDADAPPPPEDWEEHVN RTGWTVAQNKLFNKILKALQSDRLARLANEGACNEPVLRRVAVDKCARRVRQALASVSWDTKLI QWLHTTLVETLSLPMLAAYLDALQTLKGKIPTLIDRMLVSSNTKTGAAGAEALSLLLKRPWDPA VGVLSHNKPSKLPGSPLILIASSGPSSSVFPASRRHRFWQSQLSCLGKVIPVATHLLNNGSGVG VLQCLEHMTGAVRSKVLEIHSHFPHKPIILIGWSTGALVACHVSVMEYVTAVVCLGFPLLTVDG PRGDVDDPLLDMKTPVLFVIGQNSLQCHPEAMEDFREKIRAENSLVVVGGADDNLRISKAKKKS EGLTQSMVDRCIQDEIVDFLTGVLTRAEGHVGSEPRDQDAEKKKKPRDVARRDLAFEIPERGSR PASPAARLPTSPSGSEDLSSVSSSPTSSPKTKGTTVTSAQKSSQIGTSQLLRRHVQRTDAVLTH RQAQAQFAAFLKQNMLVRKAFPPGTSSCLFVPISSEPVEEVEKEELRVQLKRHHPSSPLPGAKP SKRPKIKVSLISQGDTVGGPCTLSQGGTPEAAGGKPITMTLGASAGAKELTGLLTTAKSSSSEG GVTASAAPSVASSNATPNAIHTLQSRLVATSPGSSLPGAASASSLLQGLSFSLQDISSKTTGLP GSPSPGPAPQATSVKLPTPMQSLGAITTGTSTIVRTIPVATTLSSLAATPGGKPTAIHQLLTNG GLAKLASSLPGLAQISNQASGLKVPTTITLTLRGQPSRITTLSPMGSGAAASEEPNSQMLPSSS QRLPPAP hide sequence

RefSeq Acc Id:	XP_006244873 ⟸ XM_006244811
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K522 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNECERHVIFARTDADAPPPPEDWEEHVNRTGWTVAQNKLFNKILKALQSDRLARLANEGACNE PVLRRVAVDKCARRVRQALASVSWDTKLIQWLHTTLVETLSLPMLAAYLDALQTLKGKIPTLID RMLVSSNTKTGAAGAEALSLLLKRPWDPAVGVLSHNKPSKLPGSPLILIASSGPSSSVFPASRR HRFWQSQLSCLGKVIPVATHLLNNGSGVGVLQCLEHMTGAVRSKVLEIHSHFPHKPIILIGWST GALVACHVSVMEYVTAVVCLGFPLLTVDGPRGDVDDPLLDMKTPVLFVIGQNSLQCHPEAMEDF REKIRAENSLVVVGGADDNLRISKAKKKSEGLTQSMVDRCIQDEIVDFLTGVLTRAEGHVGSEP RDQDAEKKKKPRDVARRDLAFEIPERGSRPASPAARLPTSPSGSEDLSSVSSSPTSSPKTKGTT VTSAQKSSQIGTSQLLRRHVQRTDAVLTHRQAQAQFAAFLKQNMLVRKAFPPGTSSCLFVPISS EPVEEVEKEELRVQLKRHHPSSPLPGAKPSKRPKIKVSLISQGDTVGGPCTLSQGGTPEAAGGK PITMTLGASAGAKELTGLLTTAKSSSSEGGVTASAAPSVASSNATPNAIHTLQSRLVATSPGSS LPGAASASSLLQGLSFSLQDISSKTTGLPGSPSPGPAPQATSVKLPTPMQSLGAITTGTSTIVR TIPVATTLSSLAATPGGKPTAIHQLLTNGGLAKLASSLPGLAQISNQASGLKVPTTITLTLRGQ PSRITTLSPMGSGAAASEEPNSQMLPSSSQRLPPAP hide sequence

RefSeq Acc Id:	XP_006244871 ⟸ XM_006244809
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K522 (UniProtKB/TrEMBL), A0A8L2QAX1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAHRGGERDFQTSARRMGTSLLFQLSVHERELDLVFLDHSYAKPWSAHPDASSARPTRMLFVTP RRQQENTIESDVPIDVETVTATPAPLYDNQKARSVMNECERHVIFARTDADAPPPPEDWEEHVN RTGWTVAQNKLFNKILKALQSDRLARLANEGACNEPVLRRVAVDKCARRVRQALASVSWDTKLI QWLHTTLVETLSLPMLAAYLDALQTLKGKIPTLIDRMLVSSNTKTGAAGAEALSLLLKRPWDPA VGVLSHNKPSKLPGSPLILIASSGPSSSVFPASRRHRFWQSQLSCLGKVIPVATHLLNNGSGVG VLQCLEHMTGAVRSKVLEIHSHFPHKPIILIGWSTGALVACHVSVMEYVTAVVCLGFPLLTVDG PRGDVDDPLLDMKTPVLFVIGQNSLQCHPEAMEDFREKIRAENSLVVVGGADDNLRISKAKKKS EGLTQSMVDRCIQDEIVDFLTGVLTRAEGHVGSEPRDQDAEKKKKPRDVARRDLAFEIPERGSR PASPAARLPTSPSGSEDLSSVSSSPTSSPKTKGTTVTSAQKSSQIGTSQLLRRHVQRTDAVLTH RQAQAQFAAFLKQNMLVRKAFPPGTSSCLFVPISSEPVEEVEKEELRVQLKRHHPSSPLPGAKP SKRPKIKVSLISQGDTVGGPCTLSQGGTPEAAGGKPITMTLGASAGAKELTGLLTTAKSSSSEG GVTASAAPSVASSNATPNAIHTLQSRLVATSPGSSLPGAASASSLLQGLSFSLQDISSKTTGLP GSPSPGPAPQATSVKLPTPMQSLGAITTGTSTIVRTIPVATTLSSLAATPGGKPTAIHQLLTNG GLAKLASSLPGLAQISNQASGLKVPTTITLTLRGQPSRITTLSPMGSGAAASEEPNSQMLPSSS QRLPPAP hide sequence

RefSeq Acc Id:	XP_006244872 ⟸ XM_006244810
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K522 (UniProtKB/TrEMBL), A0A8L2QAX1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAHRGGERDFQTSARRMGTSLLFQLSVHERELDLVFLDHSYAKPWSAHPDASSARPTRMLFVTP RRQQENTIESDVPIDVETVTATPAPLYDNQKARSVMNECERHVIFARTDADAPPPPEDWEEHVN RTGWTVAQNKLFNKILKALQSDRLARLANEGACNEPVLRRVAVDKCARRVRQALASVSWDTKLI QWLHTTLVETLSLPMLAAYLDALQTLKGKIPTLIDRMLVSSNTKTGAAGAEALSLLLKRPWDPA VGVLSHNKPSKLPGSPLILIASSGPSSSVFPASRRHRFWQSQLSCLGKVIPVATHLLNNGSGVG VLQCLEHMTGAVRSKVLEIHSHFPHKPIILIGWSTGALVACHVSVMEYVTAVVCLGFPLLTVDG PRGDVDDPLLDMKTPVLFVIGQNSLQCHPEAMEDFREKIRAENSLVVVGGADDNLRISKAKKKS EGLTQSMVDRCIQDEIVDFLTGVLTRAEGHVGSEPRDQDAEKKKKPRDVARRDLAFEIPERGSR PASPAARLPTSPSGSEDLSSVSSSPTSSPKTKGTTVTSAQKSSQIGTSQLLRRHVQRTDAVLTH RQAQAQFAAFLKQNMLVRKAFPPGTSSCLFVPISSEPVEEVEKEELRVQLKRHHPSSPLPGAKP SKRPKIKVSLISQGDTVGGPCTLSQGGTPEAAGGKPITMTLGASAGAKELTGLLTTAKSSSSEG GVTASAAPSVASSNATPNAIHTLQSRLVATSPGSSLPGAASASSLLQGLSFSLQDISSKTTGLP GSPSPGPAPQATSVKLPTPMQSLGAITTGTSTIVRTIPVATTLSSLAATPGGKPTAIHQLLTNG GLAKLASSLPGLAQISNQASGLKVPTTITLTLRGQPSRITTLSPMGSGAAASEEPNSQMLPSSS QRLPPAP hide sequence

RefSeq Acc Id:	XP_006244874 ⟸ XM_006244812
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K522 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNECERHVIFARTDADAPPPPEDWEEHVNRTGWTVAQNKLFNKILKALQSDRLARLANEGACNE PVLRRVAVDKCARRVRQALASVSWDTKLIQWLHTTLVETLSLPMLAAYLDALQTLKGKIPTLID RMLVSSNTKTGAAGAEALSLLLKRPWDPAVGVLSHNKPSKLPGSPLILIASSGPSSSVFPASRR HRFWQSQLSCLGKVIPVATHLLNNGSGVGVLQCLEHMTGAVRSKVLEIHSHFPHKPIILIGWST GALVACHVSVMEYVTAVVCLGFPLLTVDGPRGDVDDPLLDMKTPVLFVIGQNSLQCHPEAMEDF REKIRAENSLVVVGGADDNLRISKAKKKSEGLTQSMVDRCIQDEIVDFLTGVLTRAEGHVGSEP RDQDAEKKKKPRDVARRDLAFEIPERGSRPASPAARLPTSPSGSEDLSSVSSSPTSSPKTKGTT VTSAQKSSQIGTSQLLRRHVQRTDAVLTHRQAQAQFAAFLKQNMLVRKAFPPGTSSCLFVPISS EPVEEVEKEELRVQLKRHHPSSPLPGAKPSKRPKIKVSLISQGDTVGGPCTLSQGGTPEAAGGK PITMTLGASAGAKELTGLLTTAKSSSSEGGVTASAAPSVASSNATPNAIHTLQSRLVATSPGSS LPGAASASSLLQGLSFSLQDISSKTTGLPGSPSPGPAPQATSVKLPTPMQSLGAITTGTSTIVR TIPVATTLSSLAATPGGKPTAIHQLLTNGGLAKLASSLPGLAQISNQASGLKVPTTITLTLRGQ PSRITTLSPMGSGAAASEEPNSQMLPSSSQRLPPAP hide sequence

Ensembl Acc Id:

ENSRNOP00000073261 ⟸ ENSRNOT00000085260

Ensembl Acc Id:

ENSRNOP00000020955 ⟸ ENSRNOT00000020955

RefSeq Acc Id:	XP_038939494 ⟸ XM_039083566
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QAX1 (UniProtKB/TrEMBL), A0A0G2K522 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939495 ⟸ XM_039083567
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K522 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939497 ⟸ XM_039083569
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063123220 ⟸ XM_063267150
- Peptide Label:	isoform X2
- UniProtKB:	Q3KR73 (UniProtKB/Swiss-Prot), A0A0G2K522 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123219 ⟸ XM_063267149
- Peptide Label:	isoform X2
- UniProtKB:	Q3KR73 (UniProtKB/Swiss-Prot), A0A0G2K522 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123221 ⟸ XM_063267151
- Peptide Label:	isoform X2
- UniProtKB:	Q3KR73 (UniProtKB/Swiss-Prot), A0A0G2K522 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123217 ⟸ XM_063267147
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QAX1 (UniProtKB/TrEMBL), A0A0G2K522 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123222 ⟸ XM_063267152
- Peptide Label:	isoform X2
- UniProtKB:	Q3KR73 (UniProtKB/Swiss-Prot), A0A0G2K522 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123224 ⟸ XM_063267154
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2K522 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123223 ⟸ XM_063267153
- Peptide Label:	isoform X4
- UniProtKB:	A0A0G2K522 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000099135 ⟸ ENSRNOT00000124022

Protein Domains

KANL3/Tex30 alpha/beta hydrolase-like KANSL3 helical

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q3KR73-F1-model_v2	AlphaFold	Q3KR73	1-877	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696600

Promoter ID:

EPDNEW_R7125

Type:

initiation region

Name:

Kansl3_1

Description:

KAT8 regulatory NSL complex subunit 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	9	42,943,181 - 42,943,241	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309220	AgrOrtholog
BioCyc Gene	G2FUF-27814	BioCyc
Ensembl Genes	ENSRNOG00000015417	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000020955	ENTREZGENE
	ENSRNOT00000085260	ENTREZGENE
	ENSRNOT00000124022	ENTREZGENE
Gene3D-CATH	3.40.50.1820	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7461395	IMAGE-MGC_LOAD
InterPro	AB_hydrolase	UniProtKB/Swiss-Prot
	KANL3/Tex30_Abhydrolase	UniProtKB/Swiss-Prot
	KANSL3_1st	UniProtKB/Swiss-Prot
	NSL3/Tex30	UniProtKB/Swiss-Prot
KEGG Report	rno:316328	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:125261	IMAGE-MGC_LOAD
NCBI Gene	316328	ENTREZGENE
PANTHER	KAT8 REGULATORY NSL COMPLEX SUBUNIT 3	UniProtKB/Swiss-Prot
	PTHR13136	UniProtKB/Swiss-Prot
Pfam	Abhydrolase_11	UniProtKB/Swiss-Prot
	KANSL3_1st	UniProtKB/Swiss-Prot
PhenoGen	Kansl3	PhenoGen
RatGTEx	ENSRNOG00000015417	RatGTEx
Superfamily-SCOP	SSF53474	UniProtKB/Swiss-Prot
UniProt	A0A0G2K522	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2QAX1	ENTREZGENE, UniProtKB/TrEMBL
	KANL3_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-12-06	Kansl3	KAT8 regulatory NSL complex subunit 3	RGD1309220	similar to RIKEN cDNA 4632411B12	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1309220	similar to RIKEN cDNA 4632411B12	RGD1309220_predicted	similar to RIKEN cDNA 4632411B12 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1309220_predicted	similar to RIKEN cDNA 4632411B12 (predicted)	LOC316328_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC316328_predicted	similar to RIKEN cDNA 4632411B12 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar